Pregenerated sensors for FAAP24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030493Ensembl transcript IDs: ENSMUST00000032704.12, ENSMUST00000154597.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGTGGCCAGTGCCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTaGCCAGACAGACACCGAGGCAGGGTGACTGCGAGCCTCATCGGT | + |
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Preference number: 1 (lower is better) Translates to: KVASAARDPQAPPGG*PDRHRGRVTASLIG Trigger: ACCGATGAGGCTCGCAGTCACCCTGCCTCGGTGTCTGTCTGGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGGCACTGGCCACTTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| 3UTR TCA 90 bp | GGGGACACTCCCTACTCAGCGCTGGACCCTCACAGGGCCTCTCAGTaGCAGAGGCAGGGCAGAGAGTCTTGTACAAATCTGCTCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: GDTPYSALDPHRASQ*QRQGRESCTNLLQL Trigger: CAGCTGGAGCAGATTTGTACAAGACTCTCTGCCCTGCCTCTGTCACTGAGAGGCCCTGTGAGGGTCCAGCGCTGAGTAGGGAGTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| 3UTR GCA 90 bp | GGGCCTCTCAGTGACAGAGGCAGGGCAGAGAGTCTTGTACAAATCTaGTCCAGCTGGCTGCGGCTGGGAATGAGTCTCTGGATGATCCCC | + |
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Preference number: 1 (lower is better) Translates to: GPLSDRGRAESLVQI*SSWLRLGMSLWMIP Trigger: GGGGATCATCCAGAGACTCATTCCCAGCCGCAGCCAGCTGGAGCAGATTTGTACAAGACTCTCTGCCCTGCCTCTGTCACTGAGAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| 3UTR GCA 72 bp | AGTGCCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTaGCCAGACAGACACCGAGGCAGGGTGACTGCGAGC | + |
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Preference number: 3 (lower is better) Translates to: SAARDPQAPPGG*PDRHRGRVTAS Trigger: GCTCGCAGTCACCCTGCCTCGGTGTCTGTCTGGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGGCACT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| 3UTR-3UTR CAA 90 bp | GCAGAAAGTGGCCAGTGCCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTGCCCCTTGTCTTTAGCCCATaGCCATTGACAGGGGAACTT | + |
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Preference number: 3 (lower is better) Translates to: AESGQCRPRPPSPTRWLPLVFSP*PLTGEL Trigger: AAGTTCCCCTGTCAATGGCAATGGGCTAAAGACAAG...GGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGGCACTGGCCACTTTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| 3UTR CCA 72 bp | ATCTGCTCCAGCTGGCTGCGGCTGGGAATGAGTCTCTaGATGATCCCCGTGGGGACCCTCTTCATCTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ICSSWLRLGMSL*MIPVGTLFILA Trigger: TGCTAAGATGAAGAGGGTCCCCACGGGGATCATCCAGAGACTCATTCCCAGCCGCAGCCAGCTGGAGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| 3UTR GCA 72 bp | AGTGACAGAGGCAGGGCAGAGAGTCTTGTACAAATCTaGTCCAGCTGGCTGCGGCTGGGAATGAGTCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SDRGRAESLVQI*SSWLRLGMSLW Trigger: CCAGAGACTCATTCCCAGCCGCAGCCAGCTGGAGCAGATTTGTACAAGACTCTCTGCCCTGCCTCTGTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| 3UTR GCA 72 bp | CAATATCTGGAGAACACAAATGCCTTAAGGAAAGTGTaGCCGCTATCCCTGGGGCTCTGTTTGTATAAATAT | + |
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Preference number: 3 (lower is better) Translates to: QYLENTNALRKV*PLSLGLCLYKY Trigger: ATATTTATACAAACAGAGCCCCAGGGATAGCGGGCACACTTTCCTTAAGGCATTTGTGTTCTCCAGATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR TCA 90 bp | GCCAGTGCCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTGCCCAGACAGACACTTTCCTTGCATCTCCTaGGCCAGTTGGGACCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: ASAARDPQAPPGGCPDRHFPCIS*ASWDPR Trigger: GCGCGGGTCCCAACTGGCTCAGGAGATGCAAGGAAA...GTGTCTGTCTGGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGGCACTGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR GCA 90 bp | CTGCTCCAGCTGGCTGCGGCTGGGAATGAGTCTCTGGATGATCCCCGTGGGGACGGTGTGGATTTGCTGTaGTGCCGCGGGCCCCACGAC | + |
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Preference number: 4 (lower is better) Translates to: LLQLAAAGNESLDDPRGDGVDLL*CRGPHD Trigger: GTCGTGGGGCCCGCGGCAGCACAGCAAATCCACACC...GTCCCCACGGGGATCATCCAGAGACTCATTCCCAGCCGCAGCCAGCTGGAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR TCA 90 bp | CCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTGCCCAGACAGACACCGAGGCACAGGTAAAAATCTGCTaGTGCCAGGCCCTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: PPATPKPHQVAAQTDTEAQVKIC*CQALLK Trigger: TTTGAGGAGGGCCTGGCATCAGCAGATTTTTACCTG...TGCCTCGGTGTCTGTCTGGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | CCCACCAGGTGGCTGCCCAGACAGACACCGAGGCAGGGTGACTGCGAGCCTCATCGACTGGCTGGCCACTaGAAGCAGCACCATCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PTRWLPRQTPRQGDCEPHRLAGH*KQHHPK Trigger: CTTGGGATGGTGCTGCTTCCAGTGGCCAGCCAGTCG...ATGAGGCTCGCAGTCACCCTGCCTCGGTGTCTGTCTGGGCAGCCACCTGGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | AGCCCCACCAGGTGGCTGCCCAGACAGACACCGAGGCAGGGTGACTGCGAGCCTATGCTTCCGACTGGCTaGCCACTGGAAGCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: SPTRWLPRQTPRQGDCEPMLPTG*PLEAAP Trigger: TGGTGCTGCTTCCAGTGGCCAGCCAGTCGGAAGCAT...AGGCTCGCAGTCACCCTGCCTCGGTGTCTGTCTGGGCAGCCACCTGGTGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | GCAGAAAGTGGCCAGTGCCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTGCCCAGCACAGTAAACTTCTaGACTGCTGGGAAATACTGT | + |
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Preference number: 4 (lower is better) Translates to: AESGQCRPRPPSPTRWLPSTVNF*TAGKYC Trigger: ACAGTATTTCCCAGCAGTCCAGAAGTTTACTGTGCT...GGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGGCACTGGCCACTTTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR TCA 90 bp | TGGCCAGTGCCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTGCCCAGACAGACTCTTCTCAACTATTATaGTCCCTTGAAGATGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WPVPPATPKPHQVAAQTDSSQLL*SLEDVR Trigger: CCTCACATCTTCAAGGGATCATAATAGTTGAGAAGA...GTCTGTCTGGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGGCACTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR TCA 90 bp | GATCCCCGTGGGGACCCTCTTCATCTTAGCAGAAAGTGGCCAGTGCCGCCCGCGATCTGCTGCACTGTTTaGACAAGGGAGAGCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: DPRGDPLHLSRKWPVPPAICCTV*TRESSE Trigger: CTCCGAGCTCTCCCTTGTTCAAACAGTGCAGCAGAT...CGCGGGCGGCACTGGCCACTTTCTGCTAAGATGAAGAGGGTCCCCACGGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | CAGGGCCTCTCAGTGACAGAGGCAGGGCAGAGAGTCTTGTACAAATCTGCTCCACAGGATGCTTCCGACTaGCTGGCCACTGGAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QGLSVTEAGQRVLYKSAPQDASD*LATGSS Trigger: GCTGCTTCCAGTGGCCAGCCAGTCGGAAGCATCCTG...TGGAGCAGATTTGTACAAGACTCTCTGCCCTGCCTCTGTCACTGAGAGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR GCA 90 bp | CGGCTGGGAATGAGTCTCTGGATGATCCCCGTGGGGACCCTCTTCATCTTAGCACTTGGACGGAAGCGTTaGTCAGTTGCTGGATGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RLGMSLWMIPVGTLFILALGRKR*SVAGCS Trigger: CGAGCATCCAGCAACTGAGCAACGCTTCCGTCCAAG...TGCTAAGATGAAGAGGGTCCCCACGGGGATCATCCAGAGACTCATTCCCAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR GCA 90 bp | CCCACCAGGTGGCTGCCCAGACAGACACCGAGGCAGGGTGACTGCGAGCCTCATAGTAAACTTCTGGACTaGTGGGAAATACTGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: PTRWLPRQTPRQGDCEPHSKLLD*WEILFT Trigger: AGTGAACAGTATTTCCCAGCAGTCCAGAAGTTTACT...ATGAGGCTCGCAGTCACCCTGCCTCGGTGTCTGTCTGGGCAGCCACCTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | CTCAGTGACAGAGGCAGGGCAGAGAGTCTTGTACAAATCTGCTCCAGCTGGCTGTGGGTGAAGAAGGTGTaGATTTGCTGTGCTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: LSDRGRAESLVQICSSWLWVKKV*ICCAAA Trigger: CGCGGCAGCACAGCAAATCCACACCTTCTTCACCCA...CAGCCAGCTGGAGCAGATTTGTACAAGACTCTCTGCCCTGCCTCTGTCACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | CAGGGCCTCTCAGTGACAGAGGCAGGGCAGAGAGTCTTGTACAAATCTGCTCCAGCGTTGCTCAGTTGCTaGATGCTCGGAAACTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGLSVTEAGQRVLYKSAPALLSC*MLGNFW Trigger: CCAGAAGTTTCCGAGCATCCAGCAACTGAGCAACGC...TGGAGCAGATTTGTACAAGACTCTCTGCCCTGCCTCTGTCACTGAGAGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | GCTGGGAATGAGTCTCTGGATGATCCCCGTGGGGACCCTCTTCATCTTAGCAGAACCTCCTCCAGTTCTTaGACGGAAGCGTTGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGNESLDDPRGDPLHLSRTSSSS*TEALLS Trigger: ACTGAGCAACGCTTCCGTCCAAGAACTGGAGGAGGT...TCTGCTAAGATGAAGAGGGTCCCCACGGGGATCATCCAGAGACTCATTCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR TCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGATTTCCTTGCATCTCCTaGGCCAGTTGGGACCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRFPCIS*ASWDPR Trigger: GCGCGGGTCCCAACTGGCTCAGGAGATGCAAGGAAA...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGACGACTGGCTGGCCACTaGAAGCAGCACCATCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRRLAGH*KQHHPK Trigger: CTTGGGATGGTGCTGCTTCCAGTGGCCAGCCAGTCG...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGACAGGATGCTTCCGACTaGCTGGCCACTGGAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRQDASD*LATGSS Trigger: GCTGCTTCCAGTGGCCAGCCAGTCGGAAGCATCCTG...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGACTTGGACGGAAGCGTTaGTCAGTTGCTGGATGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRLGRKR*SVAGCS Trigger: CGAGCATCCAGCAACTGAGCAACGCTTCCGTCCAAG...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGATGGGTGAAGAAGGTGTaGATTTGCTGTGCTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRWVKKV*ICCAAA Trigger: CGCGGCAGCACAGCAAATCCACACCTTCTTCACCCA...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAATCTGCTGCACTGTTTaGACAAGGGAGAGCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRICCTV*TRESSE Trigger: CTCCGAGCTCTCCCTTGTTCAAACAGTGCAGCAGAT...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAGCGTTGCTCAGTTGCTaGATGCTCGGAAACTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRALLSC*MLGNFW Trigger: CCAGAAGTTTCCGAGCATCCAGCAACTGAGCAACGC...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAACCTCCTCCAGTTCTTaGACGGAAGCGTTGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRTSSSS*TEALLS Trigger: ACTGAGCAACGCTTCCGTCCAAGAACTGGAGGAGGT...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGACAGGTAAAAATCTGCTaGTGCCAGGCCCTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRQVKIC*CQALLK Trigger: TTTGAGGAGGGCCTGGCATCAGCAGATTTTTACCTG...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAGGAAAGGGTTCTTGCTaGGCTCTCTGGTTTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRGKGSC*ALWFAL Trigger: AAGAGCAAACCAGAGAGCCCAGCAAGAACCCTTTCC...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CCA 90 bp | TTCATCCTAATTATTTCTTCCACGTCATCCAAAGCACAGCATAGTTTTCTTGTGGGAAAGGGTTCTTGCTaGGCTCTCTGGTTTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FILIISSTSSKAQHSFLVGKGSC*ALWFAL Trigger: AAGAGCAAACCAGAGAGCCCAGCAAGAACCCTTTCC...CACAAGAAAACTATGCTGTGCTTTGGATGACGTGGAAGAAATAATTAGGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAAGCACAGTAAACTTCTaGACTGCTGGGAAATACTGT | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRSTVNF*TAGKYC Trigger: ACAGTATTTCCCAGCAGTCCAGAAGTTTACTGTGCT...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGACCAAATCTGCTTCAGTaGCATAGAGAATGCAAGATT | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRPNLLQ*HRECKI Trigger: AATCTTGCATTCTCTATGTCACTGAAGCAGATTTGG...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGATCTTCTCAACTATTATaGTCCCTTGAAGATGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRSSQLL*SLEDVR Trigger: CCTCACATCTTCAAGGGATCATAATAGTTGAGAAGA...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAAGTAAACTTCTGGACTaGTGGGAAATACTGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: SFFLNMETRRCSLKSEGRSKLLD*WEILFT Trigger: AGTGAACAGTATTTCCCAGCAGTCCAGAAGTTTACT...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | CCGCCCGCGACCCCCAAGCCCCACCAGGTGGCTGCCCAGACAGACACCGAGGCAGATCTGCTGCACTGTTaGAACAAGGGAGAGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: PPATPKPHQVAAQTDTEADLLHC*NKGELG Trigger: TCCGAGCTCTCCCTTGTTCAAACAGTGCAGCAGATC...TGCCTCGGTGTCTGTCTGGGCAGCCACCTGGTGGGGCTTGGGGGTCGCGGGCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS GCA 90 bp | GGGCTGCTGTCGCTTAGGCTGGGTGAAGAAGGTGTGGATTTGCTGTaGTGCCGCGGGCCCCACGACCTCCTCCAGTTCTTGGACGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: GLLSLRLGEEGVDLL*CRGPHDLLQFLDGS Trigger: GCTTCCGTCCAAGAACTGGAGGAGGTCGTGGGGCCCGCGGCAGCACAGCAAATCCACACCTTCTTCACCCAGCCTAAGCGACAGCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | CTCCCTACTCAGCGCTGGACCCTCACAGGGCCTCTCAGTGACAGAGGCAGGGCACATCTCCTGAGCCAGTaGGGACCCGCGCCATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LPTQRWTLTGPLSDRGRAHLLSQ*GPAPFF Trigger: GAAAAATGGCGCGGGTCCCAACTGGCTCAGGAGATG...TGCCCTGCCTCTGTCACTGAGAGGCCCTGTGAGGGTCCAGCGCTGAGTAGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS GCA 90 bp | CTGCTGTCGCTTAGGCTGGGTGAAGAAGGTGTGGATTTGCTGTGCTaGCGCGGGCCCCACGACCTCCTCCAGTTCTTGGACGGAAGCGTT | + |
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Preference number: 5 (lower is better) Translates to: LLSLRLGEEGVDLLC*RGPHDLLQFLDGSV Trigger: AACGCTTCCGTCCAAGAACTGGAGGAGGTCGTGGGGCCCGCGGCAGCACAGCAAATCCACACCTTCTTCACCCAGCCTAAGCGACAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | CGGCTGGGAATGAGTCTCTGGATGATCCCCGTGGGGACCCTCTTCATCTTAGCACTGAGGAAAGGGTTCTaGCTGGGCTCTCTGGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RLGMSLWMIPVGTLFILALRKGF*LGSLVC Trigger: GCAAACCAGAGAGCCCAGCAAGAACCCTTTCCTCAG...TGCTAAGATGAAGAGGGTCCCCACGGGGATCATCCAGAGACTCATTCCCAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CAA 90 bp | CTCAGTGACAGAGGCAGGGCAGAGAGTCTTGTACAAATCTGCTCCAGCTGGCTGTCTTGGACGGAAGCGTaGCTCAGTTGCTGGATGCTC | + |
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Preference number: 5 (lower is better) Translates to: LSDRGRAESLVQICSSWLSWTEA*LSCWML Trigger: GAGCATCCAGCAACTGAGCAACGCTTCCGTCCAAGA...CAGCCAGCTGGAGCAGATTTGTACAAGACTCTCTGCCCTGCCTCTGTCACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS TCA 90 bp | CTGTTTGAACAAGGGAGAGCTCGGAGAGCATGGAGCGCTTTTTCCTaGGGAAAGGGTTCTTGCTGGGCTCTCTGGTTTGCTCTTGAACCA | + |
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Preference number: 5 (lower is better) Translates to: LFEQGRARRAWSAFS*GKGSCWALWFALEP Trigger: TGGTTCAAGAGCAAACCAGAGAGCCCAGCAAGAACCCTTTCCTCAGGAAAAAGCGCTCCATGCTCTCCGAGCTCTCCCTTGTTCAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGACATCTCCTGAGCCAGTaGGGACCCGCGCCATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SFFLNMETRRCSLKSEGRHLLSQ*GPAPFF Trigger: GAAAAATGGCGCGGGTCCCAACTGGCTCAGGAGATG...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | GCCTTAAGGAAAGTGTGCCCGCTATCCCTGGGGCTCTGTTTGTATAAATATTTAGCTGGGCTCTCTGGTTaGCTCTTGAACCAAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: ALRKVCPLSLGLCLYKYLAGLSG*LLNQVD Trigger: ATCCACTTGGTTCAAGAGCAAACCAGAGAGCCCAGC...TAAATATTTATACAAACAGAGCCCCAGGGATAGCGGGCACACTTTCCTTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS-3UTR CAA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGACTGAGGAAAGGGTTCTaGCTGGGCTCTCTGGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SFFLNMETRRCSLKSEGRLRKGF*LGSLVC Trigger: GCAAACCAGAGAGCCCAGCAAGAACCCTTTCCTCAG...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGATCTTGGACGGAAGCGTaGCTCAGTTGCTGGATGCTC | + |
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Preference number: 5 (lower is better) Translates to: SFFLNMETRRCSLKSEGRSWTEA*LSCWML Trigger: GAGCATCCAGCAACTGAGCAACGCTTCCGTCCAAGA...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAGATCTGCTGCACTGTTaGAACAAGGGAGAGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: SFFLNMETRRCSLKSEGRDLLHC*NKGELG Trigger: TCCGAGCTCTCCCTTGTTCAAACAGTGCAGCAGATC...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCTTTTTAAATATGGAAACCAGACGCTGCAGTTTGAAGTCTGAAGGCAGAGAGTCTAACTTTTCCTaGCATCTCCTGAGCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SFFLNMETRRCSLKSEGRESNFS*HLLSQL Trigger: CAACTGGCTCAGGAGATGCAAGGAAAAGTTAGACTC...TCTGCCTTCAGACTTCAAACTGCAGCGTCTGGTTTCCATATTTAAAAAGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS-3UTR CAA 90 bp | ATCCTAATTATTTCTTCCACGTCATCCAAAGCACAGCATAGTTTTCTTGTGTTGGAGTCTAACTTTTCCTaGCATCTCCTGAGCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: ILIISSTSSKAQHSFLVLESNFS*HLLSQL Trigger: CAACTGGCTCAGGAGATGCAAGGAAAAGTTAGACTC...CAACACAAGAAAACTATGCTGTGCTTTGGATGACGTGGAAGAAATAATTAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032704.12 |
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| CDS CAA 72 bp | CTGTGCTGCCGCGGGCCCCACGACCTCCTCCAGTTCTaGGACGGAAGCGTTGCTCAGTTGCTGGATGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LCCRGPHDLLQF*DGSVAQLLDAR Trigger: CCGAGCATCCAGCAACTGAGCAACGCTTCCGTCCAAGAACTGGAGGAGGTCGTGGGGCCCGCGGCAGCACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS CCA 72 bp | TGTGCTGCCGCGGGCCCCACGACCTCCTCCAGTTCTTaGACGGAAGCGTTGCTCAGTTGCTGGATGCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CAAAGPTTSSSS*TEALLSCWMLG Trigger: TCCGAGCATCCAGCAACTGAGCAACGCTTCCGTCCAAGAACTGGAGGAGGTCGTGGGGCCCGCGGCAGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS GCA 72 bp | CTTAGGCTGGGTGAAGAAGGTGTGGATTTGCTGTGCTaGCGCGGGCCCCACGACCTCCTCCAGTTCTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LRLGEEGVDLLC*RGPHDLLQFLD Trigger: GTCCAAGAACTGGAGGAGGTCGTGGGGCCCGCGGCAGCACAGCAAATCCACACCTTCTTCACCCAGCCTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS GCA 72 bp | TCGCTTAGGCTGGGTGAAGAAGGTGTGGATTTGCTGTaGTGCCGCGGGCCCCACGACCTCCTCCAGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLRLGEEGVDLL*CRGPHDLLQFL Trigger: CAAGAACTGGAGGAGGTCGTGGGGCCCGCGGCAGCACAGCAAATCCACACCTTCTTCACCCAGCCTAAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS TCA 72 bp | CAAGGGAGAGCTCGGAGAGCATGGAGCGCTTTTTCCTaGGGAAAGGGTTCTTGCTGGGCTCTCTGGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: QGRARRAWSAFS*GKGSCWALWFA Trigger: AGCAAACCAGAGAGCCCAGCAAGAACCCTTTCCTCAGGAAAAAGCGCTCCATGCTCTCCGAGCTCTCCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS CCA 72 bp | CATTTTTCACTAGCCACAATATGTCCTAGTGGCACGTaGACCGGACCGGTCCCATCAGGCGGGTTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HFSLATICPSGT*TGPVPSGGFLS Trigger: GGAAAGGAACCCGCCTGATGGGACCGGTCCGGTCCACGTGCCACTAGGACATATTGTGGCTAGTGAAAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS CAA 72 bp | TGCCAGGCCCTCCTCAAAAATGAGTCTAACTTTTCCTaGCATCTCCTGAGCCAGTTGGGACCCGCGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: CQALLKNESNFS*HLLSQLGPAPF Trigger: AAATGGCGCGGGTCCCAACTGGCTCAGGAGATGCAAGGAAAAGTTAGACTCATTTTTGAGGAGGGCCTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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| CDS TCA 72 bp | GAGAATGCAAGATTTGCTAGACAGGTAAAAATCTGCTaGTGCCAGGCCCTCCTCAAAAATGAGTCTAACTTT | + |
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Preference number: 6 (lower is better) Translates to: ENARFARQVKIC*CQALLKNESNF Trigger: AAAGTTAGACTCATTTTTGAGGAGGGCCTGGCATCAGCAGATTTTTACCTGTCTAGCAAATCTTGCATTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032704.12 ENSMUST00000154597.2 |
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