Pregenerated sensors for FAAP20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073684Ensembl transcript IDs: ENSMUST00000097747.9, ENSMUST00000105627.8, ENSMUST00000143709.2, ENSMUST00000148406.8, ENSMUST00000178473.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCAGGAGGCACAGTGGACTCTGGGTCAGGTAGAGACTCCTGGCTaGGAAAAGCAGGCAGCGGTGGTAATGGCTGACGGTTCGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PQEAQWTLGQVETPG*EKQAAVVMADGSGS Trigger: GGACCCCGAACCGTCAGCCATTACCACCGCTGCCTGCTTTTCCCAGCCAGGAGTCTCTACCTGACCCAGAGTCCACTGTGCCTCCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 90 bp | CGGGTCAAACGCCTTCTGGCACAACGGGCAACTCAGCAACGCAAGTaGACTCTGCACAGGCACACACTCCTGGGCGCTGGGAGTTCGACC | + |
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Preference number: 1 (lower is better) Translates to: RVKRLLAQRATQQRK*TLHRHTLLGAGSST Trigger: GGTCGAACTCCCAGCGCCCAGGAGTGTGTGCCTGTGCAGAGTCCACTTGCGTTGCTGAGTTGCCCGTTGTGCCAGAAGGCGTTTGACCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR TCA 90 bp | GGGCAGGTGGCAAAGGCGTCCAGGAGAAAGTCTTGGATCCCACAGTaGAGGCCTCAGGAGGCACAGTGGACTCTGGGTCAGGTAGAGACT | + |
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Preference number: 1 (lower is better) Translates to: GQVAKASRRKSWIPQ*RPQEAQWTLGQVET Trigger: AGTCTCTACCTGACCCAGAGTCCACTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGACTTTCTCCTGGACGCCTTTGCCACCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 90 bp | TTCACAGAACAGGTGGCGGGAGCTTCCAGAGCCACGAAGGGCAGGTaGCAAAGGCGTCCAGGAGAAAGTCTTGGATCCCACAGTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: FTEQVAGASRATKGR*QRRPGESLGSHSEG Trigger: GCCTTCACTGTGGGATCCAAGACTTTCTCCTGGACGCCTTTGCCACCTGCCCTTCGTGGCTCTGGAAGCTCCCGCCACCTGTTCTGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 90 bp | GGGCAACTCAGCAACGCAAGTGGACTCTGCACAGGCACACACTCCTaGGCGCTGGGAGTTCGACCAGAATTTAGTGCAGGGCATCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GQLSNASGLCTGTHS*ALGVRPEFSAGHPF Trigger: GAAAGGATGCCCTGCACTAAATTCTGGTCGAACTCCCAGCGCCCAGGAGTGTGTGCCTGTGCAGAGTCCACTTGCGTTGCTGAGTTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR TCA 90 bp | CCTGATGCTCACCACACCACATCTTCGGTGCACTCAGCCAAGCACTaGGCAAGGTGGCTATCCACATCTAGCTGGGTCAGCTTCGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: PDAHHTTSSVHSAKH*ARWLSTSSWVSFGS Trigger: TGACCCGAAGCTGACCCAGCTAGATGTGGATAGCCACCTTGCTCAGTGCTTGGCTGAGTGCACCGAAGATGTGGTGTGGTGAGCATCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 90 bp | TCAGCAACGCAAGTGGACTCTGCACAGGCACACACTCCTGGGCGCTaGGAGTTCGACCAGAATTTAGTGCAGGGCATCCTTTCAGGGATG | + |
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Preference number: 1 (lower is better) Translates to: SATQVDSAQAHTPGR*EFDQNLVQGILSGM Trigger: CATCCCTGAAAGGATGCCCTGCACTAAATTCTGGTCGAACTCCCAGCGCCCAGGAGTGTGTGCCTGTGCAGAGTCCACTTGCGTTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR TCA 90 bp | ACAATGAAGATGAGTCCACAGAGGATCAGTGCTGCCTGCTGTCAGTaGCCAGCATTATGTCCAATGCCCATGAACAAAACCAGAAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TMKMSPQRISAACCQ*PALCPMPMNKTRRS Trigger: GCTCCTTCTGGTTTTGTTCATGGGCATTGGACATAATGCTGGTCACTGACAGCAGGCAGCACTGATCCTCTGTGGACTCATCTTCATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000143709.2 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGTGGGACCCCAGGCCACGGTGCCACCCACATTCAGCTGGGACTTCCTGTCGCCACGAAGGGCAGGTaGCAAAGGCGTCCAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ISGTPGHGATHIQLGLPVATKGR*QRRPGE Trigger: TTCTCCTGGACGCCTTTGCCACCTGCCCTTCGTGGC...GACAGGAAGTCCCAGCTGAATGTGGGTGGCACCGTGGCCTGGGGTCCCACTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAGTGGGACCCCAGGCCACGGTGCCACCCACATTCAGCTGGGACTTCCTGTCGATGTGTCTCCTGGGTaGTTCCACATCCTGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ISGTPGHGATHIQLGLPVDVSPG*FHILSG Trigger: GCCTGACAGGATGTGGAATCACCCAGGAGACACATC...GACAGGAAGTCCCAGCTGAATGTGGGTGGCACCGTGGCCTGGGGTCCCACTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097747.9 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAATCAGTGGGACCCCAGGCCACGGTGCCACCCACATTCAGCTGGGACTTCCGCTGCCTGCTGTCAGTaGCCAGCATTATGTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: FNQWDPRPRCHPHSAGTSAACCQ*PALCPM Trigger: CATTGGACATAATGCTGGTCACTGACAGCAGGCAGC...GGAAGTCCCAGCTGAATGTGGGTGGCACCGTGGCCTGGGGTCCCACTGATTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097747.9 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCTGCACAGGCACACACTCCTGGGCGCTGGGAGTTCGACCAGAATTTAGTGGTAGAGACTCCTGGCTaGGAAAAGCAGGCAGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: DSAQAHTPGRWEFDQNLVVETPG*EKQAAV Trigger: CACCGCTGCCTGCTTTTCCCAGCCAGGAGTCTCTAC...CACTAAATTCTGGTCGAACTCCCAGCGCCCAGGAGTGTGTGCCTGTGCAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGGCACAACGGGCAACTCAGCAACGCAAGTGGACTCTGCACAGGCACACACTGCTGCCTGCTGTCAGTaGCCAGCATTATGTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: SGTTGNSATQVDSAQAHTAACCQ*PALCPM Trigger: CATTGGACATAATGCTGGTCACTGACAGCAGGCAGC...AGTGTGTGCCTGTGCAGAGTCCACTTGCGTTGCTGAGTTGCCCGTTGTGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGAACGGTTTCACAGGCACACCTGAGATGTGTCTCCTGGGTGATTCCACATCCCTTTTCAATCAGTaGGACCCCAGGCCACGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SGNGFTGTPEMCLLGDSTSLFNQ*DPRPRC Trigger: GCACCGTGGCCTGGGGTCCCACTGATTGAAAAGGGA...TGTGGAATCACCCAGGAGACACATCTCAGGTGTGCCTGTGAAACCGTTCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097747.9 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGCACAGTAGCAAAAGTAGCTATGGCTGCCGTAGCAGGCGAGCGGTGCATTATGTCCAATGCCCATaGACAAAACCAGAAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GGHSSKSSYGCRSRRAVHYVQCP*TKPEGA Trigger: GGCTCCTTCTGGTTTTGTTCATGGGCATTGGACATA...ATGCACCGCTCGCCTGCTACGGCAGCCATAGCTACTTTTGCTACTGTGCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097747.9 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTCAGGCTGACAATGAAGATGAGTCCACAGAGGATCAGTGCTGCCTGCTGGCTGCCTGCTGTCAGTaGCCAGCATTATGTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: SCQADNEDESTEDQCCLLAACCQ*PALCPM Trigger: CATTGGACATAATGCTGGTCACTGACAGCAGGCAGC...CAGCAGGCAGCACTGATCCTCTGTGGACTCATCTTCATTGTCAGCCTGACAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000143709.2 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR TCA 90 bp | CGATGTCTCAGAAGCCACATCCAATGTCGGTGTGTAGGTTTGAAGGAGATACAGTCTTGGATCCCACAGTaGAGGCCTCAGGAGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: RCLRSHIQCRCVGLKEIQSWIPQ*RPQEAQ Trigger: CTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGA...CTGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTGAGACATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTCATCACATCCCCAGTGAGGAAACAGCTCAATTTCTCCATTTTCCCTTTTTCAGGTAGAGACTCCTaGCTGGGAAAAGCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HLITSPVRKQLNFSIFPFSGRDS*LGKAGS Trigger: GCTGCCTGCTTTTCCCAGCCAGGAGTCTCTACCTGA...AAAAGGGAAAATGGAGAAATTGAGCTGTTTCCTCACTGGGGATGTGATGAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 72 bp | CGCCTTCTGGCACAACGGGCAACTCAGCAACGCAAGTaGACTCTGCACAGGCACACACTCCTGGGCGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RLLAQRATQQRK*TLHRHTLLGAG Trigger: CCCAGCGCCCAGGAGTGTGTGCCTGTGCAGAGTCCACTTGCGTTGCTGAGTTGCCCGTTGTGCCAGAAGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR GCA 72 bp | TGGCACAACGGGCAACTCAGCAACGCAAGTGGACTCTaGACAGGCACACACTCCTGGGCGCTGGGAGTTCGA | + |
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Preference number: 3 (lower is better) Translates to: WHNGQLSNASGL*TGTHSWALGVR Trigger: TCGAACTCCCAGCGCCCAGGAGTGTGTGCCTGTGCAGAGTCCACTTGCGTTGCTGAGTTGCCCGTTGTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 72 bp | GCACAGTGGACTCTGGGTCAGGTAGAGACTCCTGGCTaGGAAAAGCAGGCAGCGGTGGTAATGGCTGACGGT | + |
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Preference number: 3 (lower is better) Translates to: AQWTLGQVETPG*EKQAAVVMADG Trigger: ACCGTCAGCCATTACCACCGCTGCCTGCTTTTCCCAGCCAGGAGTCTCTACCTGACCCAGAGTCCACTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR-3UTR CAA 90 bp | ACAACGGGCAACTCAGCAACGCAAGTGGACTCTGCACAGGCACACACTCCTGGGGTCCAGGAGAAAGTCTaGGATCCCACAGTGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TTGNSATQVDSAQAHTPGVQEKV*DPTVKA Trigger: GGCCTTCACTGTGGGATCCAAGACTTTCTCCTGGAC...CCCAGGAGTGTGTGCCTGTGCAGAGTCCACTTGCGTTGCTGAGTTGCCCGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR TCA 72 bp | GCAAAGGCGTCCAGGAGAAAGTCTTGGATCCCACAGTaGAGGCCTCAGGAGGCACAGTGGACTCTGGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: AKASRRKSWIPQ*RPQEAQWTLGQ Trigger: CTGACCCAGAGTCCACTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGACTTTCTCCTGGACGCCTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR TCA 72 bp | CACCACACCACATCTTCGGTGCACTCAGCCAAGCACTaGGCAAGGTGGCTATCCACATCTAGCTGGGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: HHTTSSVHSAKH*ARWLSTSSWVS Trigger: GCTGACCCAGCTAGATGTGGATAGCCACCTTGCTCAGTGCTTGGCTGAGTGCACCGAAGATGTGGTGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 72 bp | CAAGTGGACTCTGCACAGGCACACACTCCTGGGCGCTaGGAGTTCGACCAGAATTTAGTGCAGGGCATCCTT | + |
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Preference number: 3 (lower is better) Translates to: QVDSAQAHTPGR*EFDQNLVQGIL Trigger: AAGGATGCCCTGCACTAAATTCTGGTCGAACTCCCAGCGCCCAGGAGTGTGTGCCTGTGCAGAGTCCACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGAAAGTCTTGGATCCCACAGTGAAGGCCTCAGGAGGCACAGTGGACTCTGGTGTCGGTGTGTAGGTTaGAAGGAGATACAGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: GESLGSHSEGLRRHSGLWCRCVG*KEIQQG Trigger: GCCTTGCTGTATCTCCTTCAAACCTACACACCGACA...CCAGAGTCCACTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGACTTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| 3UTR CCA 72 bp | GGAACGGTTTCACAGGCACACCTGAGATGTGTCTCCTaGGTGATTCCACATCCTGTCAGGCTGACAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: GTVSQAHLRCVS*VIPHPVRLTMK Trigger: CTTCATTGTCAGCCTGACAGGATGTGGAATCACCCAGGAGACACATCTCAGGTGTGCCTGTGAAACCGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097747.9 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAGAAGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATTGTCGGTGTGTAGGTTaGAAGGAGATACAGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: TRRSQYSGVHTTMSQKPHCRCVG*KEIQQG Trigger: GCCTTGCTGTATCTCCTTCAAACCTACACACCGACA...ATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCTTCTGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR GCA 72 bp | GCTGACAATGAAGATGAGTCCACAGAGGATCAGTGCTaGCTGCTGTCAGTGACCAGCATTATGTCCAATGCC | + |
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Preference number: 3 (lower is better) Translates to: ADNEDESTEDQC*LLSVTSIMSNA Trigger: GGCATTGGACATAATGCTGGTCACTGACAGCAGGCAGCACTGATCCTCTGTGGACTCATCTTCATTGTCAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000143709.2 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR TCA 72 bp | ATGAGTCCACAGAGGATCAGTGCTGCCTGCTGTCAGTaGCCAGCATTATGTCCAATGCCCATGAACAAAACC | + |
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Preference number: 3 (lower is better) Translates to: MSPQRISAACCQ*PALCPMPMNKT Trigger: GGTTTTGTTCATGGGCATTGGACATAATGCTGGTCACTGACAGCAGGCAGCACTGATCCTCTGTGGACTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR GCA 72 bp | CAGGCTGACAATGAAGATGAGTCCACAGAGGATCAGTaGTGCCTGCTGTCAGTGACCAGCATTATGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: QADNEDESTEDQ*CLLSVTSIMSN Trigger: ATTGGACATAATGCTGGTCACTGACAGCAGGCAGCACTGATCCTCTGTGGACTCATCTTCATTGTCAGCCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000143709.2 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR-3UTR CAA 90 bp | TTATGTCCAATGCCCATGAACAAAACCAGAAGGAGCCAATACTCAGGTGTCCACTGTCGGTGTGTAGGTTaGAAGGAGATACAGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: LCPMPMNKTRRSQYSGVHCRCVG*KEIQQG Trigger: GCCTTGCTGTATCTCCTTCAAACCTACACACCGACA...GTGGACACCTGAGTATTGGCTCCTTCTGGTTTTGTTCATGGGCATTGGACATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| 3UTR CCA 72 bp | AATTTATTCTGGCTCACAGTTAAGGTACAGTCCCTGTaGCAAGGAGGGCACAGTAGCAAAAGTAGCTATGGC | + |
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Preference number: 3 (lower is better) Translates to: NLFWLTVKVQSL*QGGHSSKSSYG Trigger: GCCATAGCTACTTTTGCTACTGTGCCCTCCTTGCCACAGGGACTGTACCTTAACTGTGAGCCAGAATAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097747.9 ENSMUST00000148406.8 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | GCCACGGTGCCACCCACATTCAGCTGGGACTTCCTGTCCCAGGTAATCTCTGGGGCCACGAAGGGCAGGTaGCAAAGGCGTCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: ATVPPTFSWDFLSQVISGATKGR*QRRPGE Trigger: TTCTCCTGGACGCCTTTGCCACCTGCCCTTCGTGGC...CCCAGAGATTACCTGGGACAGGAAGTCCCAGCTGAATGTGGGTGGCACCGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS-3UTR TCA 90 bp | GGCCACGGTGCCACCCACATTCAGCTGGGACTTCCTGTCCCAGGTAATCTCTGGTCTTGGATCCCACAGTaGAGGCCTCAGGAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: GHGATHIQLGLPVPGNLWSWIPQ*RPQEAQ Trigger: CTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGA...CCAGAGATTACCTGGGACAGGAAGTCCCAGCTGAATGTGGGTGGCACCGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | TGGCAAGGAGGGCACAGTAGCAAAAGTAGCTATGGCTGCCGTAGCAGGCGAGCGGCCACGAAGGGCAGGTaGCAAAGGCGTCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: WQGGHSSKSSYGCRSRRAATKGR*QRRPGE Trigger: TTCTCCTGGACGCCTTTGCCACCTGCCCTTCGTGGC...CGCTCGCCTGCTACGGCAGCCATAGCTACTTTTGCTACTGTGCCCTCCTTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | TTTCAATCAGTGGGACCCCAGGCCACGGTGCCACCCACATTCAGCTGGGACTTCCCTCAGGAGGCACAGTaGACTCTGGGTCAGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: FQSVGPQATVPPTFSWDFPQEAQ*TLGQVE Trigger: CTCTACCTGACCCAGAGTCCACTGTGCCTCCTGAGG...GAAGTCCCAGCTGAATGTGGGTGGCACCGTGGCCTGGGGTCCCACTGATTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS-3UTR TCA 90 bp | GGGCACAGTAGCAAAAGTAGCTATGGCTGCCGTAGCAGGCGAGCGGTGCATCTCCACTCAGCCAAGCACTaGGCAAGGTGGCTATCCACA | + |
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Preference number: 4 (lower is better) Translates to: GHSSKSSYGCRSRRAVHLHSAKH*ARWLST Trigger: TGTGGATAGCCACCTTGCTCAGTGCTTGGCTGAGTG...GAGATGCACCGCTCGCCTGCTACGGCAGCCATAGCTACTTTTGCTACTGTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATCTCTTGGATCCCACAGTaGAGGCCTCAGGAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: PEGANTQVSTRRCLRSHISWIPQ*RPQEAQ Trigger: CTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGA...GATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATCGTAGAGACTCCTGGCTaGGAAAAGCAGGCAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: PEGANTQVSTRRCLRSHIVETPG*EKQAAV Trigger: CACCGCTGCCTGCTTTTCCCAGCCAGGAGTCTCTAC...GATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATCCCTCAGGAGGCACAGTaGACTCTGGGTCAGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: PEGANTQVSTRRCLRSHIPQEAQ*TLGQVE Trigger: CTCTACCTGACCCAGAGTCCACTGTGCCTCCTGAGG...GATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | GACAATGAAGATGAGTCCACAGAGGATCAGTGCTGCCTGCTGTCAGTGACCAGCCCTCAGGAGGCACAGTaGACTCTGGGTCAGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: DNEDESTEDQCCLLSVTSPQEAQ*TLGQVE Trigger: CTCTACCTGACCCAGAGTCCACTGTGCCTCCTGAGG...GCTGGTCACTGACAGCAGGCAGCACTGATCCTCTGTGGACTCATCTTCATTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097747.9 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | AAACCAGAAGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACGCCACGAAGGGCAGGTaGCAAAGGCGTCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KPEGANTQVSTRRCLRSHATKGR*QRRPGE Trigger: TTCTCCTGGACGCCTTTGCCACCTGCCCTTCGTGGC...GTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCTTCTGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATCCAATGTGCCACGAAGGGCAGGTaGCAAAGGCGTCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GANTQVSTRRCLRSHIQCATKGR*QRRPGE Trigger: TTCTCCTGGACGCCTTTGCCACCTGCCCTTCGTGGC...ACATTGGATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR TCA 90 bp | ACCAGAAGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATTCTTGGATCCCACAGTaGAGGCCTCAGGAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: TRRSQYSGVHTTMSQKPHSWIPQ*RPQEAQ Trigger: CTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGA...ATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCTTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | ACCAGAAGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATGTAGAGACTCCTGGCTaGGAAAAGCAGGCAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TRRSQYSGVHTTMSQKPHVETPG*EKQAAV Trigger: CACCGCTGCCTGCTTTTCCCAGCCAGGAGTCTCTAC...ATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCTTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATCCAATGGTAGAGACTCCTGGCTaGGAAAAGCAGGCAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: RSQYSGVHTTMSQKPHPMVETPG*EKQAAV Trigger: CACCGCTGCCTGCTTTTCCCAGCCAGGAGTCTCTAC...CATTGGATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCCAATACTCAGGTGTCCACACGACGATGTCTCAGAAGCCACATCCAATGCCTCAGGAGGCACAGTaGACTCTGGGTCAGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: RSQYSGVHTTMSQKPHPMPQEAQ*TLGQVE Trigger: CTCTACCTGACCCAGAGTCCACTGTGCCTCCTGAGG...CATTGGATGTGGCTTCTGAGACATCGTCGTGTGGACACCTGAGTATTGGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR GCA 90 bp | GTAATCTCTGGGAACGGTTTCACAGGCACACCTGAGATGTGTCTCCTGGGTGATACACCACATCTTCGGTaGACTCAGCCAAGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: VISGNGFTGTPEMCLLGDTPHLR*TQPSTE Trigger: CTCAGTGCTTGGCTGAGTGCACCGAAGATGTGGTGT...ATCACCCAGGAGACACATCTCAGGTGTGCCTGTGAAACCGTTCCCAGAGATTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS-3UTR TCA 90 bp | TTATGTCCAATGCCCATGAACAAAACCAGAAGGAGCCAATACTCAGGTGTCCACTCTTGGATCCCACAGTaGAGGCCTCAGGAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LCPMPMNKTRRSQYSGVHSWIPQ*RPQEAQ Trigger: CTGTGCCTCCTGAGGCCTTCACTGTGGGATCCAAGA...GTGGACACCTGAGTATTGGCTCCTTCTGGTTTTGTTCATGGGCATTGGACATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCCACATCCAATGTCGGTGTGTAGGTTTGAAGGAGATACAGCAAGGCACACACCACATCTTCGGTaGACTCAGCCAAGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: QKPHPMSVCRFEGDTARHTPHLR*TQPSTE Trigger: CTCAGTGCTTGGCTGAGTGCACCGAAGATGTGGTGT...GTGCCTTGCTGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | TTATGTCCAATGCCCATGAACAAAACCAGAAGGAGCCAATACTCAGGTGTCCACGTAGAGACTCCTGGCTaGGAAAAGCAGGCAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LCPMPMNKTRRSQYSGVHVETPG*EKQAAV Trigger: CACCGCTGCCTGCTTTTCCCAGCCAGGAGTCTCTAC...GTGGACACCTGAGTATTGGCTCCTTCTGGTTTTGTTCATGGGCATTGGACATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| 3UTR CAA 72 bp | TGTCTCAGAAGCCACATCCAATGTCGGTGTGTAGGTTaGAAGGAGATACAGCAAGGCACCCTGATGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: CLRSHIQCRCVG*KEIQQGTLMLT Trigger: GGTGAGCATCAGGGTGCCTTGCTGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148406.8 |
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| CDS-3UTR GCA 90 bp | TGTCTCAGAAGCCACATCCAATGTCGGTGTGTAGGTTTGAAGGAGATACAGCAAACACCACATCTTCGGTaGACTCAGCCAAGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: CLRSHIQCRCVGLKEIQQTPHLR*TQPSTE Trigger: CTCAGTGCTTGGCTGAGTGCACCGAAGATGTGGTGT...TTGCTGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR GCA 90 bp | ACGATGTCTCAGAAGCCACATCCAATGTCGGTGTGTAGGTTTGAAGGAGATACAACACCACATCTTCGGTaGACTCAGCCAAGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: TMSQKPHPMSVCRFEGDTTPHLR*TQPSTE Trigger: CTCAGTGCTTGGCTGAGTGCACCGAAGATGTGGTGT...TGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTGAGACATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CCA 90 bp | TCAGTGACCAGCATTATGTCCAATGCCCATGAACAAAACCAGAAGGAGCCAATATCAGGTAGAGACTCCTaGCTGGGAAAAGCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SVTSIMSNAHEQNQKEPISGRDS*LGKAGS Trigger: GCTGCCTGCTTTTCCCAGCCAGGAGTCTCTACCTGA...TATTGGCTCCTTCTGGTTTTGTTCATGGGCATTGGACATAATGCTGGTCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS GCA 90 bp | ATGGCTGACGGTTCGGGGTCCAATCCGCGGTCCCGCTCACGGTGCTaGGCAACAGAGCAGCCCAGGGCTCACTCTTACTTCCCTCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: MADGSGSNPRSRSRC*ATEQPRAHSYFPPR Trigger: TCTCGGAGGGAAGTAAGAGTGAGCCCTGGGCTGCTCTGTTGCGCAGCACCGTGAGCGGGACCGCGGATTGGACCCCGAACCGTCAGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS GCA 90 bp | GTAATGGCTGACGGTTCGGGGTCCAATCCGCGGTCCCGCTCACGGTaGTGCGCAACAGAGCAGCCCAGGGCTCACTCTTACTTCCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: VMADGSGSNPRSRSR*CATEQPRAHSYFPP Trigger: CGGAGGGAAGTAAGAGTGAGCCCTGGGCTGCTCTGTTGCGCAGCACCGTGAGCGGGACCGCGGATTGGACCCCGAACCGTCAGCCATTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCACATCCAATGTCGGTGTGTAGGTTTGAAGGAGATACAGCAAGGCACGTCCAGGAGAAAGTCTaGGATCCCACAGTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: QKPHPMSVCRFEGDTARHVQEKV*DPTVKA Trigger: GGCCTTCACTGTGGGATCCAAGACTTTCTCCTGGAC...GTGCCTTGCTGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CAA 90 bp | ATGTCTCAGAAGCCACATCCAATGTCGGTGTGTAGGTTTGAAGGAGATACAGCAGTCCAGGAGAAAGTCTaGGATCCCACAGTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: MSQKPHPMSVCRFEGDTAVQEKV*DPTVKA Trigger: GGCCTTCACTGTGGGATCCAAGACTTTCTCCTGGAC...TGCTGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTGAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CAA 90 bp | ACGATGTCTCAGAAGCCACATCCAATGTCGGTGTGTAGGTTTGAAGGAGATACAGTCCAGGAGAAAGTCTaGGATCCCACAGTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: TMSQKPHPMSVCRFEGDTVQEKV*DPTVKA Trigger: GGCCTTCACTGTGGGATCCAAGACTTTCTCCTGGAC...TGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGCTTCTGAGACATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097747.9 ENSMUST00000105627.8 ENSMUST00000143709.2 ENSMUST00000178473.8 |
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| CDS-3UTR CAA 90 bp | CATCTCATCACATCCCCAGTGAGGAAACAGCTCAATTTCTCCATTTTCCCTTTTGTCCAGGAGAAAGTCTaGGATCCCACAGTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: HLITSPVRKQLNFSIFPFVQEKV*DPTVKA Trigger: GGCCTTCACTGTGGGATCCAAGACTTTCTCCTGGAC...AAAAGGGAAAATGGAGAAATTGAGCTGTTTCCTCACTGGGGATGTGATGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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| CDS GCA 72 bp | GGTTCGGGGTCCAATCCGCGGTCCCGCTCACGGTGCTaGGCAACAGAGCAGCCCAGGGCTCACTCTTACTTC | + |
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Preference number: 6 (lower is better) Translates to: GSGSNPRSRSRC*ATEQPRAHSYF Trigger: GAAGTAAGAGTGAGCCCTGGGCTGCTCTGTTGCGCAGCACCGTGAGCGGGACCGCGGATTGGACCCCGAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097747.9 ENSMUST00000178473.8 |
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