Pregenerated sensors for FAAH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034171Ensembl transcript IDs: ENSMUST00000049095.6
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGGCATGTCCTGGGTTTCTGTAGGAGTCCAGGGGAGGGCAGGTaGTTGCCTCTTCCCGTGCTGGGCATCTCCTCATGGGTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GGHVLGFCRSPGEGR*LPLPVLGISSWVAG Trigger: TCCTGCCACCCATGAGGAGATGCCCAGCACGGGAAGAGGCAACCACCTGCCCTCCCCTGGACTCCTACAGAAACCCAGGACATGCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR GCA 90 bp | GGCATGTCCTGGGTTTCTGTAGGAGTCCAGGGGAGGGCAGGTGGTTaGCTCTTCCCGTGCTGGGCATCTCCTCATGGGTGGCAGGATCCT | + |
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Preference number: 1 (lower is better) Translates to: GMSWVSVGVQGRAGG*LFPCWASPHGWQDP Trigger: AGGATCCTGCCACCCATGAGGAGATGCCCAGCACGGGAAGAGGCAACCACCTGCCCTCCCCTGGACTCCTACAGAAACCCAGGACATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 90 bp | GAGGGAGGAAGACCCGGGCGGTGTCCATCAAAGCTGGGGCCAATCTaGACAAGGAAGGAAGGGCAGGAGCCAAGTGCCAAGGACATGTCC | + |
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Preference number: 1 (lower is better) Translates to: EGGRPGRCPSKLGPI*TRKEGQEPSAKDMS Trigger: GGACATGTCCTTGGCACTTGGCTCCTGCCCTTCCTTCCTTGTTCAGATTGGCCCCAGCTTTGATGGACACCGCCCGGGTCTTCCTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 90 bp | AGAGGTGGAATGAGGGAGGAAGACCCGGGCGGTGTCCATCAAAGCTaGGGCCAATCTGAACAAGGAAGGAAGGGCAGGAGCCAAGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: RGGMREEDPGGVHQS*GQSEQGRKGRSQVP Trigger: TGGCACTTGGCTCCTGCCCTTCCTTCCTTGTTCAGATTGGCCCCAGCTTTGATGGACACCGCCCGGGTCTTCCTCCCTCATTCCACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 90 bp | CAGAAAGGGGAGCAAGGTCCAGACTTGGTTATGGAGGGCATGTCCTaGGTTTCTGTAGGAGTCCAGGGGAGGGCAGGTGGTTGCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: QKGEQGPDLVMEGMS*VSVGVQGRAGGCLF Trigger: GAAGAGGCAACCACCTGCCCTCCCCTGGACTCCTACAGAAACCCAGGACATGCCCTCCATAACCAAGTCTGGACCTTGCTCCCCTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR GCA 90 bp | ACACAGAGAGCACTCCCTGATACTCCTACTCTTGCACACATGACCTaGGGGCCAGGTAGCCTGCTTGATGTCATCATACCCAGGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: TQRALPDTPTLAHMT*GPGSLLDVIIPRDF Trigger: GAAGTCCCTGGGTATGATGACATCAAGCAGGCTACCTGGCCCGCAGGTCATGTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR GCA 90 bp | CTGTTTCTGTTTGCTTATCCTGAGCATAGTGGGAGGAATTCAATGTaGTTGTGGGCTGGGTGGAAGAAGTATGGAGGAGCTGAGGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: LFLFAYPEHSGRNSM*LWAGWKKYGGAEGW Trigger: CCAACCCTCAGCTCCTCCATACTTCTTCCACCCAGCCCACAAGCACATTGAATTCCTCCCACTATGCTCAGGATAAGCAAACAGAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 90 bp | TACTGGCAAGCTAACCAAACACAGACTGGAGGAGACTTATTTGGCTaGGAAGCTCAAATTGATGACACTGGTATCTCTGTAAGTGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: YWQANQTQTGGDLFG*EAQIDDTGISVSVP Trigger: GGGAACACTTACAGAGATACCAGTGTCATCAATTTGAGCTTCCCAGCCAAATAAGTCTCCTCCAGTCTGTGTTTGGTTAGCTTGCCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 90 bp | CTTATCCAGTTACATCAGCAGCGTTTAAGTCGACTCCACTCTTCTTaGAATACTTGTTCCTTGGCTCCCATTAACTGTGAGCTTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LIQLHQQRLSRLHSS*NTCSLAPINCELSS Trigger: GCTGGAAAGCTCACAGTTAATGGGAGCCAAGGAACAAGTATTTCAAGAAGAGTGGAGTCGACTTAAACGCTGCTGATGTAACTGGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | AGACTTGGTTATGGAGGGCATGTCCTGGGTTTCTGTAGGAGTCCAGGGGAGGGCTGCCTCTTCCCGTGCTaGGCATCTCCTCATGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RLGYGGHVLGFCRSPGEGCLFPC*ASPHGW Trigger: CCACCCATGAGGAGATGCCCAGCACGGGAAGAGGCA...GCCCTCCCCTGGACTCCTACAGAAACCCAGGACATGCCCTCCATAACCAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | GACATGATTACAGCCAGCTCTGGAGGGACAGCACAGCCCTCTCAGCAGGCTCTGAGCAAGGTCCAGACTTaGTTATGGAGGGCATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: DMITASSGGTAQPSQQALSKVQT*LWRACP Trigger: AGGACATGCCCTCCATAACCAAGTCTGGACCTTGCT...CAGAGCCTGCTGAGAGGGCTGTGCTGTCCCTCCAGAGCTGGCTGTAATCATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCGGGCCAGGTAGCCTGCTTGATGTCATCATACCCAGGGACTTCTGCTTTTTTGGAGCAGGAGAGTaGCATGATTACAGCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: TCGPGSLLDVIIPRDFCFFGAGE*HDYSQL Trigger: GAGCTGGCTGTAATCATGTCACTCTCCTGCTCCAAA...AAAGCAGAAGTCCCTGGGTATGATGACATCAAGCAGGCTACCTGGCCCGCAGGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCGGGCCAGGTAGCCTGCTTGATGTCATCATACCCAGGGACTTCTGCTTTTCCAACAAGCCTGACTaGCTATCTACTAAGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TCGPGSLLDVIIPRDFCFSNKPD*LSTKCQ Trigger: CTGGCACTTAGTAGATAGCCAGTCAGGCTTGTTGGA...AAAGCAGAAGTCCCTGGGTATGATGACATCAAGCAGGCTACCTGGCCCGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTGACATAGTCCTTCCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTTGGGTGGCAGGATCCTaGATAGATGGGGCTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QGDIVLPQSSVLTCGYVSWVAGS*IDGAAV Trigger: CACTGCAGCCCCATCTATTCAGGATCCTGCCACCCA...ACTTACATATCCACAAGTCAGAACACTGGACTGAGGAAGGACTATGTCACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | CTTACATGTCACTTCACACAGAGAGCACTCCCTGATACTCCTACTCTTGCACACAGCCCAGACCACAAGTaGTCTCACTCACTCACCACA | + |
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Preference number: 2 (lower is better) Translates to: LTCHFTQRALPDTPTLAHSPDHK*SHSLTT Trigger: TGTGGTGAGTGAGTGAGACCACTTGTGGTCTGGGCT...GTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR GCA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGGGGAGGAATTCAATGTaGTTGTGGGCTGGGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: INCELSSLHVTSHREHSLGRNSM*LWAGWK Trigger: CTTCCACCCAGCCCACAAGCACATTGAATTCCTCCC...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | CTTACATGTCACTTCACACAGAGAGCACTCCCTGATACTCCTACTCTTGCACACAGTAGGGGGTCAGGATaGAAAGTAGACCAGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LTCHFTQRALPDTPTLAHSRGSG*KVDQKG Trigger: CCCTTTCTGGTCTACTTTCCATCCTGACCCCCTACT...GTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGTGCTTGTGGGCTGGGTaGAAGAAGTATGGAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: INCELSSLHVTSHREHSLCLWAG*KKYGGA Trigger: AGCTCCTCCATACTTCTTCCACCCAGCCCACAAGCA...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | TACACAGTTGCTGGTAGAATGAGAAACCATTCAAGCAGGGGCTGTTTCTGTTTGATGGAGGGCATGTCCTaGGTTTCTGTAGGAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: YTVAGRMRNHSSRGCFCLMEGMS*VSVGVQ Trigger: CTGGACTCCTACAGAAACCCAGGACATGCCCTCCAT...CAAACAGAAACAGCCCCTGCTTGAATGGTTTCTCATTCTACCAGCAACTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | TACACAGTTGCTGGTAGAATGAGAAACCATTCAAGCAGGGGCTGTTTCTGTTTGAATGTGCTTGTGGGCTaGGTGGAAGAAGTATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: YTVAGRMRNHSSRGCFCLNVLVG*VEEVWR Trigger: CCTCCATACTTCTTCCACCCAGCCCACAAGCACATT...CAAACAGAAACAGCCCCTGCTTGAATGGTTTCTCATTCTACCAGCAACTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTGGTAGAATGAGAAACCATTCAAGCAGGGGCTGTTTCTGTTTGCTTATCGTAGAAGTTGATGCATaGAGCCTTCTTGACCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VAGRMRNHSSRGCFCLLIVEVDA*SLLDQE Trigger: CTCCTGGTCAAGAAGGCTGCATGCATCAACTTCTAC...GATAAGCAAACAGAAACAGCCCCTGCTTGAATGGTTTCTCATTCTACCAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTGACCTACAGTGTAAATACACAGTTGCTGGTAGAATGAGAAACCATTCAAGCAGGAGAGTGACATaGTTACAGCCAGCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LCDLQCKYTVAGRMRNHSSRRVT*LQPALE Trigger: CTCCAGAGCTGGCTGTAATCATGTCACTCTCCTGCT...TGAATGGTTTCTCATTCTACCAGCAACTGTGTATTTACACTGTAGGTCACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTGACCTACAGTGTAAATACACAGTTGCTGGTAGAATGAGAAACCATTCACCTCTCAGCAGGCTCTaGTTCCAAGGTCCTAATAGA | + |
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Preference number: 2 (lower is better) Translates to: LCDLQCKYTVAGRMRNHSPLSRL*FQGPNR Trigger: TCTATTAGGACCTTGGAACCAGAGCCTGCTGAGAGG...TGAATGGTTTCTCATTCTACCAGCAACTGTGTATTTACACTGTAGGTCACACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTGACCTACAGTGTAAATACACAGTTGCTGGTAGAATGAGAAACCATTCAGGAGACTTATTTGGCTaGGAAGCTCAAATTGATGAC | + |
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Preference number: 2 (lower is better) Translates to: LCDLQCKYTVAGRMRNHSGDLFG*EAQIDD Trigger: GTCATCAATTTGAGCTTCCCAGCCAAATAAGTCTCC...TGAATGGTTTCTCATTCTACCAGCAACTGTGTATTTACACTGTAGGTCACACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 72 bp | CCCGTGCTGGGCATCTCCTCATGGGTGGCAGGATCCTaGATAGATGGGGCTGCAGTGCAGAGCGCATGGGCC | + |
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Preference number: 3 (lower is better) Translates to: PVLGISSWVAGS*IDGAAVQSAWA Trigger: GGCCCATGCGCTCTGCACTGCAGCCCCATCTATTCAGGATCCTGCCACCCATGAGGAGATGCCCAGCACGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR GCA 72 bp | TGGGTTTCTGTAGGAGTCCAGGGGAGGGCAGGTGGTTaGCTCTTCCCGTGCTGGGCATCTCCTCATGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: WVSVGVQGRAGG*LFPCWASPHGW Trigger: CCACCCATGAGGAGATGCCCAGCACGGGAAGAGGCAACCACCTGCCCTCCCCTGGACTCCTACAGAAACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 72 bp | ATGAGGGAGGAAGACCCGGGCGGTGTCCATCAAAGCTaGGGCCAATCTGAACAAGGAAGGAAGGGCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: MREEDPGGVHQS*GQSEQGRKGRS Trigger: GCTCCTGCCCTTCCTTCCTTGTTCAGATTGGCCCCAGCTTTGATGGACACCGCCCGGGTCTTCCTCCCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 72 bp | ACGCCTTTAATCCCAGCACCCAGGCAGGCAGCCTTGTaGGCTGAAAGCCAGCCTGATCTACAGAGTGAGATC | + |
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Preference number: 3 (lower is better) Translates to: TPLIPAPRQAAL*AESQPDLQSEI Trigger: GATCTCACTCTGTAGATCAGGCTGGCTTTCAGCTCACAAGGCTGCCTGCCTGGGTGCTGGGATTAAAGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR GCA 72 bp | GCCAATCTGAACAAGGAAGGAAGGGCAGGAGCCAAGTaGCAAGGACATGTCCCTGTGTCTACCTTGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: ANLNKEGRAGAK*QGHVPVSTLWV Trigger: CACCCACAAGGTAGACACAGGGACATGTCCTTGGCACTTGGCTCCTGCCCTTCCTTCCTTGTTCAGATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR GCA 72 bp | GCACTCCCTGATACTCCTACTCTTGCACACATGACCTaGGGGCCAGGTAGCCTGCTTGATGTCATCATACCC | + |
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Preference number: 3 (lower is better) Translates to: ALPDTPTLAHMT*GPGSLLDVIIP Trigger: GGGTATGATGACATCAAGCAGGCTACCTGGCCCGCAGGTCATGTGTGCAAGAGTAGGAGTATCAGGGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 72 bp | AGAGAGCACTCCCTGATACTCCTACTCTTGCACACATaGCCTGCGGGCCAGGTAGCCTGCTTGATGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: REHSLILLLLHT*PAGQVACLMSS Trigger: TGATGACATCAAGCAGGCTACCTGGCCCGCAGGTCATGTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 72 bp | CCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTaGTACTCCTACTCTTGCACACATGACCTGCGGGCC | + |
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Preference number: 3 (lower is better) Translates to: PAYMSLHTESTP*YSYSCTHDLRA Trigger: GGCCCGCAGGTCATGTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 72 bp | GTGCTTGTGGGCTGGGTGGAAGAAGTATGGAGGAGCTaGGGGTTGGTAGAAGTTGATGCATGCAGCCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: VLVGWVEEVWRS*GLVEVDACSLL Trigger: AAGAAGGCTGCATGCATCAACTTCTACCAACCCTCAGCTCCTCCATACTTCTTCCACCCAGCCCACAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 72 bp | CCTACATGGAGGAGCCGTCAGGAGCCAGGTCAATACTaGCAAGCTAACCAAACACAGACTGGAGGAGACTTA | + |
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Preference number: 3 (lower is better) Translates to: PTWRSRQEPGQY*QANQTQTGGDL Trigger: TAAGTCTCCTCCAGTCTGTGTTTGGTTAGCTTGCCAGTATTGACCTGGCTCCTGACGGCTCCTCCATGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CAA 90 bp | ACCTGCGGGCCAGGTAGCCTGCTTGATGTCATCATACCCAGGGACTTCTGCTTTGCTGGGAAGCTCAAATaGATGACACTGGTATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TCGPGSLLDVIIPRDFCFAGKLK*MTLVSL Trigger: CAGAGATACCAGTGTCATCAATTTGAGCTTCCCAGC...AAAGCAGAAGTCCCTGGGTATGATGACATCAAGCAGGCTACCTGGCCCGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 72 bp | GCTCTGGAGGGACAGCACAGCCCTCTCAGCAGGCTCTaGTTCCAAGGTCCTAATAGAAAAATACCCAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: ALEGQHSPLSRL*FQGPNRKIPRK Trigger: TTTTCTGGGTATTTTTCTATTAGGACCTTGGAACCAGAGCCTGCTGAGAGGGCTGTGCTGTCCCTCCAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 72 bp | TATCCTGAGCATAGTGGGAGGAATTCAATGTGCTTGTaGGCTGGGTGGAAGAAGTATGGAGGAGCTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: YPEHSGRNSMCL*AGWKKYGGAEG Trigger: ACCCTCAGCTCCTCCATACTTCTTCCACCCAGCCCACAAGCACATTGAATTCCTCCCACTATGCTCAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 72 bp | TGGCAAACAGTAGGCACTCGATTCAATGATGGCAGGTaGAGTTCTCCATCCCTCCCTTCACTTGTCCTTATC | + |
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Preference number: 3 (lower is better) Translates to: WQTVGTRFNDGR*SSPSLPSLVLI Trigger: GATAAGGACAAGTGAAGGGAGGGATGGAGAACTCCACCTGCCATCATTGAATCGAGTGCCTACTGTTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CAA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGATGCATGCAGCCTTCTaGACCAGGAGGAAGCTCTAC | + |
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Preference number: 3 (lower is better) Translates to: INCELSSLHVTSHREHSLMHAAF*TRRKLY Trigger: GTAGAGCTTCCTCCTGGTCAAGAAGGCTGCATGCAT...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR GCA 72 bp | TTTGCTTATCCTGAGCATAGTGGGAGGAATTCAATGTaGTTGTGGGCTGGGTGGAAGAAGTATGGAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: FAYPEHSGRNSM*LWAGWKKYGGA Trigger: AGCTCCTCCATACTTCTTCCACCCAGCCCACAAGCACATTGAATTCCTCCCACTATGCTCAGGATAAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CAA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGAGGAATTCAATGTGCTaGTGGGCTGGGTGGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: INCELSSLHVTSHREHSLRNSMC*WAGWKK Trigger: CTTCTTCCACCCAGCCCACAAGCACATTGAATTCCT...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 72 bp | GTGACCTACAGTGTAAATACACAGTTGCTGGTAGAATaGGAAACCATTCAAGCAGGGGCTGTTTCTGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: VTYSVNTQLLVE*ETIQAGAVSVC Trigger: GCAAACAGAAACAGCCCCTGCTTGAATGGTTTCTCATTCTACCAGCAACTGTGTATTTACACTGTAGGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR TCA 72 bp | TTACATCAGCAGCGTTTAAGTCGACTCCACTCTTCTTaGAATACTTGTTCCTTGGCTCCCATTAACTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: LHQQRLSRLHSS*NTCSLAPINCE Trigger: CTCACAGTTAATGGGAGCCAAGGAACAAGTATTTCAAGAAGAGTGGAGTCGACTTAAACGCTGCTGATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CCA 72 bp | TCCAGTGTTCTGACTTGTGGATATGTAAGTAGAAAATaGGTTACAGAGATGACCCTAAAAGATATCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSVLTCGYVSRK*VTEMTLKDIPA Trigger: GGCTGGGATATCTTTTAGGGTCATCTCTGTAACCCATTTTCTACTTACATATCCACAAGTCAGAACACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR-3UTR CAA 90 bp | TTGTGTGACCTACAGTGTAAATACACAGTTGCTGGTAGAATGAGAAACCATTCACTACACAGAGAAACCTaGTTCTCTACAACAGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: LCDLQCKYTVAGRMRNHSLHRET*FSTTAR Trigger: TCTAGCTGTTGTAGAGAACAAGGTTTCTCTGTGTAG...TGAATGGTTTCTCATTCTACCAGCAACTGTGTATTTACACTGTAGGTCACACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | ATAGATGGGGCTGCAGTGCAGAGCGCATGGGCCTTAGGTCCTCCAGAGCTGGGCCCGGCTCGCTGCTTCTaGCGCGCCCTGGTCACCGCG | + |
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Preference number: 4 (lower is better) Translates to: IDGAAVQSAWALGPPELGPARCF*RALVTA Trigger: CGCGGTGACCAGGGCGCGGCAGAAGCAGCGAGCCGG...GCCCAGCTCTGGAGGACCTAAGGCCCATGCGCTCTGCACTGCAGCCCCATCTAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR TCA 90 bp | GTAGGAGTCCAGGGGAGGGCAGGTGGTTGCCTCTTCCCGTGCTGGGCATCTCCTAGCAGCCACCATCACTaGACAGCCCACCTGCCGACA | + |
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Preference number: 4 (lower is better) Translates to: VGVQGRAGGCLFPCWASPSSHHH*TAHLPT Trigger: TGTCGGCAGGTGGGCTGTTCAGTGATGGTGGCTGCT...AGGAGATGCCCAGCACGGGAAGAGGCAACCACCTGCCCTCCCCTGGACTCCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | GTAGGAGTCCAGGGGAGGGCAGGTGGTTGCCTCTTCCCGTGCTGGGCATCTCCTAACTTCTGTACCAGTTaGAGCAGGGGCAGAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VGVQGRAGGCLFPCWASPNFCTS*SRGRAS Trigger: GCTGGCTCTGCCCCTGCTCCAACTGGTACAGAAGTT...AGGAGATGCCCAGCACGGGAAGAGGCAACCACCTGCCCTCCCCTGGACTCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | GACATGATTACAGCCAGCTCTGGAGGGACAGCACAGCCCTCTCAGCAGGCTCTGAGACACAGCTCTTCCTaGCAGGGCAGAGCCACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DMITASSGGTAQPSQQALRHSSS*QGRATH Trigger: GTGCGTGGCTCTGCCCTGGCAGGAAGAGCTGTGTCT...CAGAGCCTGCTGAGAGGGCTGTGCTGTCCCTCCAGAGCTGGCTGTAATCATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | ATAGATGGGGCTGCAGTGCAGAGCGCATGGGCCTTAGGTCCTCCAGAGCTGGGCAGCCCTCCTCATGGCTaGAGTGGGCATGGTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IDGAAVQSAWALGPPELGSPPHG*SGHGVV Trigger: AACTACACCATGCCCACTCCAGCCATGAGGAGGGCT...GCCCAGCTCTGGAGGACCTAAGGCCCATGCGCTCTGCACTGCAGCCCCATCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | AGACTTGGTTATGGAGGGCATGTCCTGGGTTTCTGTAGGAGTCCAGGGGAGGGCTGGGGGACGTTGGTGTaGACAAAGGGCACAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGYGGHVLGFCRSPGEGWGTLV*TKGTAP Trigger: GGGAGCTGTGCCCTTTGTGCACACCAACGTCCCCCA...GCCCTCCCCTGGACTCCTACAGAAACCCAGGACATGCCCTCCATAACCAAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | GACATGATTACAGCCAGCTCTGGAGGGACAGCACAGCCCTCTCAGCAGGCTCTGACTGTTGAGAAAGGCTaGCAGCCGAGGAAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DMITASSGGTAQPSQQALTVEKG*QPRKQR Trigger: CCTCTGTTTCCTCGGCTGGCAGCCTTTCTCAACAGT...CAGAGCCTGCTGAGAGGGCTGTGCTGTCCCTCCAGAGCTGGCTGTAATCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | ACCTGCGGGCCAGGTAGCCTGCTTGATGTCATCATACCCAGGGACTTCTGCTTTCACGGGTTCATGGTCTaGCCAAAGAGGGGGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TCGPGSLLDVIIPRDFCFHGFMV*PKRGLL Trigger: CAGTAACCCCCTCTTTGGCCAGACCATGAACCCGTG...AAAGCAGAAGTCCCTGGGTATGATGACATCAAGCAGGCTACCTGGCCCGCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | CACTTCACACAGAGAGCACTCCCTGATACTCCTACTCTTGCACACATGACCTGCGCTTCCACGGGTTCATaGTCTGGCCAAAGAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFTQRALPDTPTLAHMTCASTGS*SGQRGG Trigger: ACCCCCTCTTTGGCCAGACCATGAACCCGTGGAAGC...GCAGGTCATGTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGTGAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR TCA 90 bp | AAGCAGGGGCTGTTTCTGTTTGCTTATCCTGAGCATAGTGGGAGGAATTCAATGAGCCTCCAGATCCAATaGGAGCCCCCTCACCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQGLFLFAYPEHSGRNSMSLQIQ*EPPHPL Trigger: CAGGGGGTGAGGGGGCTCTCATTGGATCTGGAGGCT...CATTGAATTCCTCCCACTATGCTCAGGATAAGCAAACAGAAACAGCCCCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR TCA 90 bp | CCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTAGAAAATGGGTTACAGAGCAGCGGTCACAGTGGTaGCAGGCACCACCCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQSSVLTCGYVSRKWVTEQRSQW*QAPPPQ Trigger: CTGCGGGGGTGGTGCCTGTCACCACTGTGACCGCTG...CTCTGTAACCCATTTTCTACTTACATATCCACAAGTCAGAACACTGGACTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGTGCAGCCGGAAGCGCTaGACCGCCTTGTCCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: INCELSSLHVTSHREHSLCSRKR*TALSMV Trigger: GACCATGGACAAGGCGGTGCAGCGCTTCCGGCTGCA...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | GATCCTGGACAGCCAGGGCTACACAGAGAAACCTTGTTCTCTACAACAGCTAGAAAGGGCACAGCTCCCTaGAGCTTCAGTACCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DPGQPGLHRETLFSTTARKGTAP*SFSTCT Trigger: GGTGCAGGTACTGAAGCTGCAGGGAGCTGTGCCCTT...TCTAGCTGTTGTAGAGAACAAGGTTTCTCTGTGTAGCCCTGGCTGTCCAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | AAGCAGGGGCTGTTTCTGTTTGCTTATCCTGAGCATAGTGGGAGGAATTCAATGGCAGCCTCGAGACTCTaGTTGGTCTCCATCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQGLFLFAYPEHSGRNSMAASRL*LVSITA Trigger: GGCTGTGATGGAGACCAAGCAGAGTCTCGAGGCTGC...CATTGAATTCCTCCCACTATGCTCAGGATAAGCAAACAGAAACAGCCCCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| 3UTR CAA 72 bp | GCTTATCCTGAGCATAGTGGGAGGAATTCAATGTGCTaGTGGGCTGGGTGGAAGAAGTATGGAGGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AYPEHSGRNSMC*WAGWKKYGGAE Trigger: CTCAGCTCCTCCATACTTCTTCCACCCAGCCCACAAGCACATTGAATTCCTCCCACTATGCTCAGGATAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR TCA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGGAGGACACATACTGTTaGGAAAGGCTGCCAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: INCELSSLHVTSHREHSLEDTYC*ERLPAE Trigger: CTCGGCTGGCAGCCTTTCTCAACAGTATGTGTCCTC...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | CTTACATGTCACTTCACACAGAGAGCACTCCCTGATACTCCTACTCTTGCACACAAAGAGCACAGCTTCTaGGGACAGTTCCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTCHFTQRALPDTPTLAHKEHSF*GQFPTL Trigger: CAGAGTGGGGAACTGTCCCCAGAAGCTGTGCTCTTT...GTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | GTTGCTGGTAGAATGAGAAACCATTCAAGCAGGGGCTGTTTCTGTTTGCTTATCTCACAGCCCTCCTCATaGCTGGAGTGGGCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGRMRNHSSRGCFCLLISQPSS*LEWAWC Trigger: ACACCATGCCCACTCCAGCCATGAGGAGGGCTGTGA...GATAAGCAAACAGAAACAGCCCCTGCTTGAATGGTTTCTCATTCTACCAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | CCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTAGAAAATGGGTTACAGAGCCTCGAGACTCTGCTTaGTCTCCATCACAGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQSSVLTCGYVSRKWVTEPRDSA*SPSQPS Trigger: GGAGGGCTGTGATGGAGACCAAGCAGAGTCTCGAGG...CTCTGTAACCCATTTTCTACTTACATATCCACAAGTCAGAACACTGGACTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGCACGTCCAAGTTCATTaGCTTCCACTGGGCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: INCELSSLHVTSHREHSLHVQVH*LPLGND Trigger: GTCATTGCCCAGTGGAAGGCAATGAACTTGGACGTG...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | CCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTAGAAAATGGGTTACAGAGAACCTCCTGGACTCTTaGAGGGCTTCCACGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQSSVLTCGYVSRKWVTENLLDS*RASTGS Trigger: TGAACCCGTGGAAGCCCTCCAAGAGTCCAGGAGGTT...CTCTGTAACCCATTTTCTACTTACATATCCACAAGTCAGAACACTGGACTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | GATCCTGGACAGCCAGGGCTACACAGAGAAACCTTGTTCTCTACAACAGCTAGATCGCCTTTGAAGTTTTaGAGAAAAGAGCAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DPGQPGLHRETLFSTTARSPLKF*RKEQPP Trigger: TGGTGGCTGCTCTTTTCTCCAAAACTTCAAAGGCGA...TCTAGCTGTTGTAGAGAACAAGGTTTCTCTGTGTAGCCCTGGCTGTCCAGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | GTTGCTGGTAGAATGAGAAACCATTCAAGCAGGGGCTGTTTCTGTTTGCTTATCAGGAGGTCACACAGTTaGTCCCTTTGTTCACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAGRMRNHSSRGCFCLLIRRSHS*SLCSLP Trigger: GGGAAGTGAACAAAGGGACCAACTGTGTGACCTCCT...GATAAGCAAACAGAAACAGCCCCTGCTTGAATGGTTTCTCATTCTACCAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | GCTAGAAATAAATCTGCCATCCCTCCAACAAGCCTGACTGGCTATCTACTAAGTCAAAGAGGGGGTTACTaGAGTCATAGCTTAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARNKSAIPPTSLTGYLLSQRGGY*SHSLAW Trigger: CCATGCTAAGCTATGACTGCAGTAACCCCCTCTTTG...ACTTAGTAGATAGCCAGTCAGGCTTGTTGGAGGGATGGCAGATTTATTTCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | CCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTAGAAAATGGGTTACAGAGTGGCTGGAGTGGGCATaGTGTAGTTGTCAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQSSVLTCGYVSRKWVTEWLEWA*CSCQFH Trigger: ATGAAACTGACAACTACACCATGCCCACTCCAGCCA...CTCTGTAACCCATTTTCTACTTACATATCCACAAGTCAGAACACTGGACTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CCA 90 bp | TTGTGTGACCTACAGTGTAAATACACAGTTGCTGGTAGAATGAGAAACCATTCATTCATTGCCTTCCACTaGGCAATGACGGACTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LCDLQCKYTVAGRMRNHSFIAFH*AMTDWR Trigger: TCGCCAGTCCGTCATTGCCCAGTGGAAGGCAATGAA...TGAATGGTTTCTCATTCTACCAGCAACTGTGTATTTACACTGTAGGTCACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR TCA 90 bp | CCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTAGAAAATGGGTTACAGAGCCACAAAGTCGCCTTTaGAGTTTTGGAGAAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQSSVLTCGYVSRKWVTEPQSRL*SFGEKS Trigger: GCTCTTTTCTCCAAAACTTCAAAGGCGACTTTGTGG...CTCTGTAACCCATTTTCTACTTACATATCCACAAGTCAGAACACTGGACTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | ATTAACTGTGAGCTTTCCAGCTTACATGTCACTTCACACAGAGAGCACTCCCTGCTATACCCTTTTTCATaGCCTTCTTCAGAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: INCELSSLHVTSHREHSLLYPFS*PSSECC Trigger: ACAACATTCTGAAGAAGGGCATGAAAAAGGGTATAG...CAGGGAGTGCTCTCTGTGTGAAGTGACATGTAAGCTGGAAAGCTCACAGTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR GCA 90 bp | TTGTGTGACCTACAGTGTAAATACACAGTTGCTGGTAGAATGAGAAACCATTCATACATCTCAATCTCATaGTGCAGTTCCCACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCDLQCKYTVAGRMRNHSYISIS*CSSHSF Trigger: AAAGCTGTGGGAACTGCAGCATGAGATTGAGATGTA...TGAATGGTTTCTCATTCTACCAGCAACTGTGTATTTACACTGTAGGTCACACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 90 bp | CGGAAGCGCTGCACCGCCTTGTCCATGGTCTCCAGGCCGGCTCGCTaGTTCTGCCGCGCCCTGGTCACCGCGCCCCGGGCGGTCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RKRCTALSMVSRPAR*FCRALVTAPRAVWL Trigger: GAGCCAGACCGCCCGGGGCGCGGTGACCAGGGCGCGGCAGAAGCAGCGAGCCGGCCTGGAGACCATGGACAAGGCGGTGCAGCGCTTCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 90 bp | GCTCGCTGCTTCTGCCGCGCCCTGGTCACCGCGCCCCGGGCGGTCTaGCTCCTGGTCCATCGCAGGACCACCGCCGCCGACAGCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARCFCRALVTAPRAV*LLVHRRTTAADSKL Trigger: CAGCTTGCTGTCGGCGGCGGTGGTCCTGCGATGGACCAGGAGCCAGACCGCCCGGGGCGCGGTGACCAGGGCGCGGCAGAAGCAGCGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 90 bp | CCTTGTCCATGGTCTCCAGGCCGGCTCGCTGCTTCTGCCGCGCCCTaGTCACCGCGCCCCGGGCGGTCTGGCTCCTGGTCCATCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PCPWSPGRLAASAAP*SPRPGRSGSWSIAG Trigger: TCCTGCGATGGACCAGGAGCCAGACCGCCCGGGGCGCGGTGACCAGGGCGCGGCAGAAGCAGCGAGCCGGCCTGGAGACCATGGACAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 90 bp | AGCAAGGCCTCTGAATCCAGGTCAGGATTCTGCAGCCGGAAGCGCTaGACCGCCTTGTCCATGGTCTCCAGGCCGGCTCGCTGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKASESRSGFCSRKR*TALSMVSRPARCFC Trigger: GCAGAAGCAGCGAGCCGGCCTGGAGACCATGGACAAGGCGGTGCAGCGCTTCCGGCTGCAGAATCCTGACCTGGATTCAGAGGCCTTGCT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 90 bp | AGCATGGACTGGGGGACGTTGGTGTGCACAAAGGGCACAGCTCCCTaGAGCTTCAGTACCTGCACCACCACACAGTCACTCTCCGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMDWGTLVCTKGTAP*SFSTCTTTQSLSDV Trigger: GACATCGGAGAGTGACTGTGTGGTGGTGCAGGTACTGAAGCTGCAGGGAGCTGTGCCCTTTGTGCACACCAACGTCCCCCAGTCCATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 90 bp | CCCCTGAGGAACCTCCTGGACTCTTGGAGGGCTTCCACGGGTTCATaGTCTGGCCAAAGAGGGGGTTACTGCAGTCATAGCTTAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PLRNLLDSWRASTGS*SGQRGGYCSHSLAW Trigger: CCATGCTAAGCTATGACTGCAGTAACCCCCTCTTTGGCCAGACCATGAACCCGTGGAAGCCCTCCAAGAGTCCAGGAGGTTCCTCAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS TCA 90 bp | CTTTGTAGTGTTCCATCTGGGCATCGTCCTCAGCGGTCACAGTGGTaGCAGGCACCACCCCCGCAGGGAAGTCCAGGCAGTTATAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCSVPSGHRPQRSQW*QAPPPQGSPGSYRE Trigger: TTCTCTATAACTGCCTGGACTTCCCTGCGGGGGTGGTGCCTGTCACCACTGTGACCGCTGAGGACGATGCCCAGATGGAACACTACAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 90 bp | TGGAGGGCTTCCACGGGTTCATGGTCTGGCCAAAGAGGGGGTTACTaGAGTCATAGCTTAGCATGGACTGGGGGACGTTGGTGTGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: WRASTGSWSGQRGGY*SHSLAWTGGRWCAQ Trigger: TTGTGCACACCAACGTCCCCCAGTCCATGCTAAGCTATGACTGCAGTAACCCCCTCTTTGGCCAGACCATGAACCCGTGGAAGCCCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CAA 90 bp | AGACTTGGTTATGGAGGGCATGTCCTGGGTTTCTGTAGGAGTCCAGGGGAGGGCCGAGGACACATACTGTaGAGAAAGGCTGCCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RLGYGGHVLGFCRSPGEGRGHIL*RKAASR Trigger: TCGGCTGGCAGCCTTTCTCAACAGTATGTGTCCTCG...GCCCTCCCCTGGACTCCTACAGAAACCCAGGACATGCCCTCCATAACCAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CAA 90 bp | CACTTCACACAGAGAGCACTCCCTGATACTCCTACTCTTGCACACATGACCTGCGCCTCGAGACTCTGCTaGGTCTCCATCACAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFTQRALPDTPTLAHMTCASRLC*VSITAL Trigger: GAGGGCTGTGATGGAGACCAAGCAGAGTCTCGAGGC...GCAGGTCATGTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGTGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 90 bp | TCTGCTTGGTCTCCATCACAGCCCTCCTCATGGCTGGAGTGGGCATaGTGTAGTTGTCAGTTTCATAGTATCCCACACGAAGGGGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAWSPSQPSSWLEWA*CSCQFHSIPHEGVE Trigger: CTCGACCCCTTCGTGTGGGATACTATGAAACTGACAACTACACCATGCCCACTCCAGCCATGAGGAGGGCTGTGATGGAGACCAAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 90 bp | CCCAGCATGGGGGTTAGCACCACGTCCAAGTTCATTGCCTTCCACTaGGCAATGACGGACTGGCGATACATCTCAATCTCATGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSMGVSTTSKFIAFH*AMTDWRYISISCCS Trigger: ACTGCAGCATGAGATTGAGATGTATCGCCAGTCCGTCATTGCCCAGTGGAAGGCAATGAACTTGGACGTGGTGCTAACCCCCATGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS TCA 90 bp | GCGATACATCTCAATCTCATGCTGCAGTTCCCACAGCTTTTCGGCTaGCCGAGGACACATACTGTTGAGAAAGGCTGCCAGCCGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AIHLNLMLQFPQLFG*PRTHTVEKGCQPRK Trigger: TTTCCTCGGCTGGCAGCCTTTCTCAACAGTATGTGTCCTCGGTCAGCCGAAAAGCTGTGGGAACTGCAGCATGAGATTGAGATGTATCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTGACATAGTCCTTCCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTGAACCTCCTGGACTCTaGGAGGGCTTCCACGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGDIVLPQSSVLTCGYVSEPPGL*EGFHGF Trigger: GAACCCGTGGAAGCCCTCCAAGAGTCCAGGAGGTTC...ACTTACATATCCACAAGTCAGAACACTGGACTGAGGAAGGACTATGTCACCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CAA 90 bp | GATCCTGGACAGCCAGGGCTACACAGAGAAACCTTGTTCTCTACAACAGCTAGAGTCGCCTTTGAAGTTTaGGAGAAAAGAGCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: DPGQPGLHRETLFSTTARVAFEV*EKRAAT Trigger: GGTGGCTGCTCTTTTCTCCAAAACTTCAAAGGCGAC...TCTAGCTGTTGTAGAGAACAAGGTTTCTCTGTGTAGCCCTGGCTGTCCAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CAA 90 bp | CACTTCACACAGAGAGCACTCCCTGATACTCCTACTCTTGCACACATGACCTGCTCCACAAAGTCGCCTTaGAAGTTTTGGAGAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HFTQRALPDTPTLAHMTCSTKSP*KFWRKE Trigger: CTCTTTTCTCCAAAACTTCAAAGGCGACTTTGTGGA...GCAGGTCATGTGTGCAAGAGTAGGAGTATCAGGGAGTGCTCTCTGTGTGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CAA 90 bp | CCTCAGTCCAGTGTTCTGACTTGTGGATATGTAAGTAGAAAATGGGTTACAGAGACACAGTTGGTCCCTTaGTTCACTTCCCAGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQSSVLTCGYVSRKWVTETQLVP*FTSQAF Trigger: AAAGGCCTGGGAAGTGAACAAAGGGACCAACTGTGT...CTCTGTAACCCATTTTCTACTTACATATCCACAAGTCAGAACACTGGACTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS-3UTR CAA 90 bp | GTTGCTGGTAGAATGAGAAACCATTCAAGCAGGGGCTGTTTCTGTTTGCTTATCCCCTTCTTCAGAATGTaGTCCCACATATCCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VAGRMRNHSSRGCFCLLIPFFRM*SHISPK Trigger: CTTTGGGGATATGTGGGACAACATTCTGAAGAAGGG...GATAAGCAAACAGAAACAGCCCCTGCTTGAATGGTTTCTCATTCTACCAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
||
| CDS CCA 72 bp | GCGCCCTGGTCACCGCGCCCCGGGCGGTCTGGCTCCTaGTCCATCGCAGGACCACCGCCGCCGACAGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: APWSPRPGRSGS*SIAGPPPPTAS Trigger: GCTTGCTGTCGGCGGCGGTGGTCCTGCGATGGACCAGGAGCCAGACCGCCCGGGGCGCGGTGACCAGGGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | TTCTGCCGCGCCCTGGTCACCGCGCCCCGGGCGGTCTaGCTCCTGGTCCATCGCAGGACCACCGCCGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: FCRALVTAPRAV*LLVHRRTTAAD Trigger: GTCGGCGGCGGTGGTCCTGCGATGGACCAGGAGCCAGACCGCCCGGGGCGCGGTGACCAGGGCGCGGCAGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | TGCACCGCCTTGTCCATGGTCTCCAGGCCGGCTCGCTaGTTCTGCCGCGCCCTGGTCACCGCGCCCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: CTALSMVSRPAR*FCRALVTAPRA Trigger: CGCCCGGGGCGCGGTGACCAGGGCGCGGCAGAAGCAGCGAGCCGGCCTGGAGACCATGGACAAGGCGGTGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | TGGTCCATCGCAGGACCACCGCCGCCGACAGCAAGCTaGAGGCTAGGCAAACCCCGGAGAGTCCAGACAGCG | + |
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Preference number: 6 (lower is better) Translates to: WSIAGPPPPTAS*RLGKPRRVQTA Trigger: CGCTGTCTGGACTCTCCGGGGTTTGCCTAGCCTGCAGCTTGCTGTCGGCGGCGGTGGTCCTGCGATGGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | GAGGCTCACGGGGACGCCATAGAGCAGGCCCTGCCGTaGGGCCTGGGACAGCTGAGTCTCACAGTCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: EAHGDAIEQALP*GLGQLSLTVSQ Trigger: CTGACTGACTGTGAGACTCAGCTGTCCCAGGCCCCACGGCAGGGCCTGCTCTATGGCGTCCCCGTGAGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS TCA 72 bp | GGAGCCTCCAGATCCAATGAGAGCCCCCTCACCCCCTaGGGAACCTCCTGGACTCTTGGAGGGCTTCCACGG | + |
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Preference number: 6 (lower is better) Translates to: GASRSNESPLTP*GTSWTLGGLPR Trigger: CCGTGGAAGCCCTCCAAGAGTCCAGGAGGTTCCTCAGGGGGTGAGGGGGCTCTCATTGGATCTGGAGGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS TCA 72 bp | GTTCCATCTGGGCATCGTCCTCAGCGGTCACAGTGGTaGCAGGCACCACCCCCGCAGGGAAGTCCAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VPSGHRPQRSQW*QAPPPQGSPGS Trigger: ACTGCCTGGACTTCCCTGCGGGGGTGGTGCCTGTCACCACTGTGACCGCTGAGGACGATGCCCAGATGGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | TCTGAATCCAGGTCAGGATTCTGCAGCCGGAAGCGCTaGACCGCCTTGTCCATGGTCTCCAGGCCGGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: SESRSGFCSRKR*TALSMVSRPAR Trigger: GCGAGCCGGCCTGGAGACCATGGACAAGGCGGTGCAGCGCTTCCGGCTGCAGAATCCTGACCTGGATTCAGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS TCA 72 bp | TACCAGTTGGAGCAGGGGCAGAGCCAGCAAGGCCTCTaGATCCAGGTCAGGATTCTGCAGCCGGAAGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: YQLEQGQSQQGL*IQVRILQPEAL Trigger: CAGCGCTTCCGGCTGCAGAATCCTGACCTGGATTCAGAGGCCTTGCTGGCTCTGCCCCTGCTCCAACTGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | AGAGCCAGCAAGGCCTCTGAATCCAGGTCAGGATTCTaGAGCCGGAAGCGCTGCACCGCCTTGTCCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: RASKASESRSGF*SRKRCTALSMV Trigger: GACCATGGACAAGGCGGTGCAGCGCTTCCGGCTGCAGAATCCTGACCTGGATTCAGAGGCCTTGCTGGCTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | CACAGATGCCACAGAAGGCAGAAGGGAACCGGATGCTaGCGCCGATGTCAGTGCCTAAACCCAGAGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HRCHRRQKGTGC*RRCQCLNPEGS Trigger: GCTCCCCTCTGGGTTTAGGCACTGACATCGGCGGCAGCATCCGGTTCCCTTCTGCCTTCTGTGGCATCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | TGGGGGACGTTGGTGTGCACAAAGGGCACAGCTCCCTaGAGCTTCAGTACCTGCACCACCACACAGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: WGTLVCTKGTAP*SFSTCTTTQSL Trigger: GAGTGACTGTGTGGTGGTGCAGGTACTGAAGCTGCAGGGAGCTGTGCCCTTTGTGCACACCAACGTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CAA 90 bp | ACAGCCCACCTGCCGACAGGACCTCCAGGGCATAAGGTATGTTGTTaGGTAAGAAGGGGACCAGCGTGTGGCCAGCAGCCTCGAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: TAHLPTGPPGHKVCC*VRRGPACGQQPRDS Trigger: AGAGTCTCGAGGCTGCTGGCCACACGCTGGTCCCCTTCTTACCAAACAACATACCTTATGCCCTGGAGGTCCTGTCGGCAGGTGGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CAA 72 bp | CTGCCGACAGGACCTCCAGGGCATAAGGTATGTTGTTaGGTAAGAAGGGGACCAGCGTGTGGCCAGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPTGPPGHKVCC*VRRGPACGQQP Trigger: AGGCTGCTGGCCACACGCTGGTCCCCTTCTTACCAAACAACATACCTTATGCCCTGGAGGTCCTGTCGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | TCCACGGGTTCATGGTCTGGCCAAAGAGGGGGTTACTaGAGTCATAGCTTAGCATGGACTGGGGGACGTTGG | + |
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Preference number: 6 (lower is better) Translates to: STGSWSGQRGGY*SHSLAWTGGRW Trigger: CCAACGTCCCCCAGTCCATGCTAAGCTATGACTGCAGTAACCCCCTCTTTGGCCAGACCATGAACCCGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | GGCTTTCATGCACAATGCCAGGCTATCCACATCCCGTaGCATGGGGCCAACAGAAAGCTGCACTGCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GFHAQCQAIHIP*HGANRKLHCCL Trigger: CAGACAGCAGTGCAGCTTTCTGTTGGCCCCATGGCACGGGATGTGGATAGCCTGGCATTGTGCATGAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | AACCTCCTGGACTCTTGGAGGGCTTCCACGGGTTCATaGTCTGGCCAAAGAGGGGGTTACTGCAGTCATAGC | + |
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Preference number: 6 (lower is better) Translates to: NLLDSWRASTGS*SGQRGGYCSHS Trigger: GCTATGACTGCAGTAACCCCCTCTTTGGCCAGACCATGAACCCGTGGAAGCCCTCCAAGAGTCCAGGAGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | TGCCCGGTGTGTTCAAATCCAGAGCAGGACCCAGCATaGGGGTTAGCACCACGTCCAAGTTCATTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CPVCSNPEQDPA*GLAPRPSSLPS Trigger: GGAAGGCAATGAACTTGGACGTGGTGCTAACCCCCATGCTGGGTCCTGCTCTGGATTTGAACACACCGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS TCA 72 bp | CCCACAGCTTTTCGGCTGACCGAGGACACATACTGTTaGGAAAGGCTGCCAGCCGAGGAAACAGAGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PTAFRLTEDTYC*ERLPAEETEAS Trigger: TGAAGCCTCTGTTTCCTCGGCTGGCAGCCTTTCTCAACAGTATGTGTCCTCGGTCAGCCGAAAAGCTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | TCATGCACAATGCCAGGCTATCCACATCCCGTGCCATaGGGCCAACAGAAAGCTGCACTGCTGTCTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SCTMPGYPHPVP*GQQKAALLSVH Trigger: ATGGACAGACAGCAGTGCAGCTTTCTGTTGGCCCCATGGCACGGGATGTGGATAGCCTGGCATTGTGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CAA 72 bp | TCCCACAGCTTTTCGGCTGACCGAGGACACATACTGTaGAGAAAGGCTGCCAGCCGAGGAAACAGAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SHSFSADRGHIL*RKAASRGNRGF Trigger: GAAGCCTCTGTTTCCTCGGCTGGCAGCCTTTCTCAACAGTATGTGTCCTCGGTCAGCCGAAAAGCTGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | GAGAAAAGAGCAGCCACCATCACTGAACAGCCCACCTaGCGACAGGACCTCCAGGGCATAAGGTATGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: EKRAATITEQPT*RQDLQGIRYVV Trigger: AACAACATACCTTATGCCCTGGAGGTCCTGTCGGCAGGTGGGCTGTTCAGTGATGGTGGCTGCTCTTTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS TCA 72 bp | CTCAATCTCATGCTGCAGTTCCCACAGCTTTTCGGCTaGCCGAGGACACATACTGTTGAGAAAGGCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LNLMLQFPQLFG*PRTHTVEKGCQ Trigger: CTGGCAGCCTTTCTCAACAGTATGTGTCCTCGGTCAGCCGAAAAGCTGTGGGAACTGCAGCATGAGATTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | CCAAGCGGAACAAATCCTCACAAAGTAGGGCTTTCATaGACAATGCCAGGCTATCCACATCCCGTGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: PSGTNPHKVGLS*TMPGYPHPVPW Trigger: CCATGGCACGGGATGTGGATAGCCTGGCATTGTGCATGAAAGCCCTACTTTGTGAGGATTTGTTCCGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | GGGGTTAGCACCACGTCCAAGTTCATTGCCTTCCACTaGGCAATGACGGACTGGCGATACATCTCAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: GVSTTSKFIAFH*AMTDWRYISIS Trigger: TGAGATTGAGATGTATCGCCAGTCCGTCATTGCCCAGTGGAAGGCAATGAACTTGGACGTGGTGCTAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CAA 72 bp | CCCCAAGCAGGGATCCACAAAGTCGCCTTTGAAGTTTaGGAGAAAAGAGCAGCCACCATCACTGAACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: PQAGIHKVAFEV*EKRAATITEQP Trigger: GGGCTGTTCAGTGATGGTGGCTGCTCTTTTCTCCAAAACTTCAAAGGCGACTTTGTGGATCCCTGCTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | ACTCTGCTTGGTCTCCATCACAGCCCTCCTCATGGCTaGAGTGGGCATGGTGTAGTTGTCAGTTTCATAGTA | + |
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Preference number: 6 (lower is better) Translates to: TLLGLHHSPPHG*SGHGVVVSFIV Trigger: TACTATGAAACTGACAACTACACCATGCCCACTCCAGCCATGAGGAGGGCTGTGATGGAGACCAAGCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS CCA 72 bp | CCCAAGCAGGGATCCACAAAGTCGCCTTTGAAGTTTTaGAGAAAAGAGCAGCCACCATCACTGAACAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PKQGSTKSPLKF*RKEQPPSLNSP Trigger: TGGGCTGTTCAGTGATGGTGGCTGCTCTTTTCTCCAAAACTTCAAAGGCGACTTTGTGGATCCCTGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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| CDS GCA 72 bp | ACTGCACAGCCACAGGCAGGCCTATACCCTTTTTCATaGCCTTCTTCAGAATGTTGTCCCACATATCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: TAQPQAGLYPFS*PSSECCPTYPQ Trigger: TTGGGGATATGTGGGACAACATTCTGAAGAAGGGCATGAAAAAGGGTATAGGCCTGCCTGTGGCTGTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049095.6 |
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