Pregenerated sensors for FA2H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033579Ensembl transcript IDs: ENSMUST00000038475.9
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGAATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTaGCACCGGTCCCTCTGCTGCATGGGGAAGCCCCCAGGGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GEYDVATGLHAMLLL*HRSLCCMGKPPGSP Trigger: TGGGCTCCCTGGGGGCTTCCCCATGCAGCAGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 90 bp | AAGAAAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATGCCATaGTTCTGCTGTGACACCGGTCCCTCTGCTGCATGGGGAAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: KKGQENTMWPQACMP*FCCDTGPSAAWGSP Trigger: GGGGCTTCCCCATGCAGCAGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 90 bp | ATCCCCAAAGACAAGGGCCAGGGCTCCTGTCAGCCTTGCAGAGGATaGCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTGGA | + |
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Preference number: 1 (lower is better) Translates to: IPKDKGQGSCQPCRG*QAPLCFLPRQTSTG Trigger: TCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAGGCTGACAGGAGCCCTGGCCCTTGTCTTTGGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 90 bp | CTCCCAAGAAAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATaGCATGCTTCTGCTGTGACACCGGTCCCTCTGCTGCATGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LPRKDRRIRCGHRPA*HASAVTPVPLLHGE Trigger: TTCCCCATGCAGCAGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTTTCTTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 90 bp | AACTCTCCCAAGAAAGGACAGGAGAATACGATGTGGCCACAGGCCTaGATGCCATGCTTCTGCTGTGACACCGGTCCCTCTGCTGCATGG | + |
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Preference number: 1 (lower is better) Translates to: NSPKKGQENTMWPQA*MPCFCCDTGPSAAW Trigger: CCATGCAGCAGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTTTCTTGGGAGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 90 bp | AACAGTACAAATCATAGACTGGTCACACTGCCTCTCTTTAGTCTTTaGACCCATTGGGTTTTTGATAAGTTTCAAGTAGTAATCGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: NSTNHRLVTLPLFSL*THWVFDKFQVVIAC Trigger: ACAAGCGATTACTACTTGAAACTTATCAAAAACCCAATGGGTGCAAAGACTAAAGAGAGGCAGTGTGACCAGTCTATGATTTGTACTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CAA 90 bp | GGGTGGGAGAGGGTGGGTGATAAGGCACCACATACAAGTCCCTTCTaGGCTTCAGGAGGCACTTCTGGGAGGGTCCTGAGTGGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GWERVGDKAPHTSPF*ASGGTSGRVLSGAG Trigger: ACCTGCCCCACTCAGGACCCTCCCAGAAGTGCCTCCTGAAGCCAAGAAGGGACTTGTATGTGGTGCCTTATCACCCACCCTCTCCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR CCA 90 bp | ATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGACACCGGTCCCTAGGTCTAGGTGGAGGTaGGGGGTAGGACATGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: IRCGHRPACHASAVTPVPRSRWR*GVGHGW Trigger: CCACCCATGTCCTACCCCCCACCTCCACCTAGACCT...AGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CAA 90 bp | AAGGGCCAGGGCTCCTGTCAGCCTTGCAGAGGATGCCAGGCACCCTaGTGCTTTCTGCCCAGGCAGACAAGTACTGGATTACTTCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: KGQGSCQPCRGCQAP*CFLPRQTSTGLLPQ Trigger: CTGCGGAAGTAATCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAGGCTGACAGGAGCCCTGGCCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTGTCCTGGGGTCTGGGAATGGCCTGTGGGAGGCATCATGCTGTTTCTTCAACAGCACTGAGGGCTaGAGCTTAGGCAGGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: VAVLGSGNGLWEASCCFFNSTEG*SLGRNA Trigger: GGCATTCCTGCCTAAGCTTCAGCCCTCAGTGCTGTT...GAAGAAACAGCATGATGCCTCCCACAGGCCATTCCCAGACCCCAGGACAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGAGAGGGTGGGTGATAAGGCACCACATACAAGTCCCTTCTTGGCTTCAGGGGGTAGGACATGGGTaGGGTCTGGGGATAGACCGA | + |
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Preference number: 2 (lower is better) Translates to: GGRGWVIRHHIQVPSWLQGVGHG*GLGIDR Trigger: TCGGTCTATCCCCAGACCCCACCCATGTCCTACCCC...CTGAAGCCAAGAAGGGACTTGTATGTGGTGCCTTATCACCCACCCTCTCCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCACTTCTGGGAGGGTCCTGAGTGGGGCAGGTTTCTACCTGTGCAGATGGAGCAGGAGAATACGATGTaGCCACAGGCCTGCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: RHFWEGPEWGRFLPVQMEQENTM*PQACMP Trigger: TGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTG...CTCCATCTGCACAGGTAGAAACCTGCCCCACTCAGGACCCTCCCAGAAGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTGTTGGGGAGCGGTTTTGTGGTTTGGGCAGGGAGAGAGGAGACAGAGAAACCCTGAAACAGCACTaGGGGCTGAAGCTTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASVGERFCGLGRERGDRETLKQH*GLKLRQ Trigger: CTGCCTAAGCTTCAGCCCTCAGTGCTGTTTCAGGGT...TTCTCTGTCTCCTCTCTCCCTGCCCAAACCACAAAACCGCTCCCCAACAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGTTGGGGAGCGGTTTTGTGGTTTGGGCAGGGAGAGAGGAGACAGAGAATTCCTTCATGCCCCTTaGGGCCAATGTCTGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: ASVGERFCGLGRERGDREFLHAP*GQCLDP Trigger: AGGGTCCAGACATTGGCCCCAAGGGGCATGAAGGAA...TTCTCTGTCTCCTCTCTCCCTGCCCAAACCACAAAACCGCTCCCCAACAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGATCATTCTCTGGGAATaGGCCAGTCCCCAAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KDRRIRCGHRPACHASAVIILWE*ASPQGP Trigger: TGGCCCTTGGGGACTGGCTCATTCCCAGAGAATGAT...CACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR TCA 90 bp | CAAATCATAGACTGGTCACACTGCCTCTCTTTAGTCTTTGCACCCATTGGGTTTCTTCTGGGAGGGTCCTaGGTGGGGCAGGTTTCTACC | + |
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Preference number: 2 (lower is better) Translates to: QIIDWSHCLSLVFAPIGFLLGGS*VGQVST Trigger: GGTAGAAACCTGCCCCACTCAGGACCCTCCCAGAAG...AAACCCAATGGGTGCAAAGACTAAAGAGAGGCAGTGTGACCAGTCTATGATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTGTTGGGGAGCGGTTTTGTGGTTTGGGCAGGGAGAGAGGAGACAGAGAACCCTTCATTTACTTCTaGATCATCAAACTCTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ASVGERFCGLGRERGDREPFIYF*IIKLSQ Trigger: TTGGGAGAGTTTGATGATTCAGAAGTAAATGAAGGG...TTCTCTGTCTCCTCTCTCCCTGCCCAAACCACAAAACCGCTCCCCAACAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCTCAATACATAGGATTAGAAAGGGCCATCTGACCAGCTACTTCATTTGGTTCAGGAGGCACTTCTaGGAGGGTCCTGAGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ISSIHRIRKGHLTSYFIWFRRHF*EGPEWG Trigger: GCCCCACTCAGGACCCTCCCAGAAGTGCCTCCTGAA...CCAAATGAAGTAGCTGGTCAGATGGCCCTTTCTAATCCTATGTATTGAGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCTCAATACATAGGATTAGAAAGGGCCATCTGACCAGCTACTTCATTTGGTGCCAGGCACCCTTGTaGTTTCTGCCCAGGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: ISSIHRIRKGHLTSYFIWCQAPL*FLPRQT Trigger: TGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCA...CCAAATGAAGTAGCTGGTCAGATGGCCCTTTCTAATCCTATGTATTGAGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR TCA 72 bp | GATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTaGCACCGGTCCCTCTGCTGCATGGGGAAGCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: DVATGLHAMLLL*HRSLCCMGKPP Trigger: TGGGGGCTTCCCCATGCAGCAGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | TCTCCACCAGGCCCCAGGGCTAGACAGAGCCCGTCATaGCTGGCCAAGCTGACCTCAGCAGGTCTAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPPGPRARQSPS*LAKLTSAGLGG Trigger: TCCACCTAGACCTGCTGAGGTCAGCTTGGCCAGGCATGACGGGCTCTGTCTAGCCCTGGGGCCTGGTGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CCA 72 bp | CCATGCTTCTGCTGTGACACCGGTCCCTCTGCTGCATaGGGAAGCCCCCAGGGAGCCCAGGGTTCTAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PCFCCDTGPSAA*GSPQGAQGSKA Trigger: TGCCTTAGAACCCTGGGCTCCCTGGGGGCTTCCCCATGCAGCAGAGGGACCGGTGTCACAGCAGAAGCATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | GACAAGGGCCAGGGCTCCTGTCAGCCTTGCAGAGGATaGCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: DKGQGSCQPCRG*QAPLCFLPRQT Trigger: TGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAGGCTGACAGGAGCCCTGGCCCTTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | TCTGGGAGGGTCCTGAGTGGGGCAGGTTTCTACCTGTaGAGATGGAGGCCAAGTATGACCGGGGCTAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SGRVLSGAGFYL*RWRPSMTGARL Trigger: CAGCCTAGCCCCGGTCATACTTGGCCTCCATCTGCACAGGTAGAAACCTGCCCCACTCAGGACCCTCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | AATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTaGTGTGACACCGGTCCCTCTGCTGCATGGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: NTMWPQACMPCF*CDTGPSAAWGS Trigger: GCTTCCCCATGCAGCAGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CCA 72 bp | GGGGCTCTCACCAACGTAGACTTCTCCAGCCTCTGTTaGGGAGCGGTTTTGTGGTTTGGGCAGGGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GALTNVDFSSLC*GAVLWFGQGER Trigger: CCTCTCTCCCTGCCCAAACCACAAAACCGCTCCCCAACAGAGGCTGGAGAAGTCTACGTTGGTGAGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR TCA 72 bp | AGGAATGCCAACGGGGAGGCCATCATTCTCTGGGAATaGGCCAGTCCCCAAGGGCCACGGCTATCAAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: RNANGEAIILWE*ASPQGPRLSRG Trigger: TCCTCTTGATAGCCGTGGCCCTTGGGGACTGGCTCATTCCCAGAGAATGATGGCCTCCCCGTTGGCATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | AAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATaGCATGCTTCTGCTGTGACACCGGTCCCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: KDRRIRCGHRPA*HASAVTPVPLL Trigger: CAGCAGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | AGCCTTGCAGAGGATGCCAGGCACCCTTGTGCTTTCTaGCCAGGCAGACAAGTACTGGATTACTTCCGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SLAEDARHPCAF*PGRQVLDYFRS Trigger: GCTGCGGAAGTAATCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | AAGAAAGGACAGGAGAATACGATGTGGCCACAGGCCTaGATGCCATGCTTCTGCTGTGACACCGGTCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: KKGQENTMWPQA*MPCFCCDTGPS Trigger: AGAGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CCA 72 bp | ACATACAAGTCCCTTCTTGGCTTCAGGAGGCACTTCTaGGAGGGTCCTGAGTGGGGCAGGTTTCTACCTGTG | + |
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Preference number: 3 (lower is better) Translates to: TYKSLLGFRRHF*EGPEWGRFLPV Trigger: CACAGGTAGAAACCTGCCCCACTCAGGACCCTCCCAGAAGTGCCTCCTGAAGCCAAGAAGGGACTTGTATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | TCCTGTCAGCCTTGCAGAGGATGCCAGGCACCCTTGTaGTTTCTGCCCAGGCAGACAAGTACTGGATTACTT | + |
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Preference number: 3 (lower is better) Translates to: SCQPCRGCQAPL*FLPRQTSTGLL Trigger: AAGTAATCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAGGCTGACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CCA 72 bp | TCAAACTCTCCCAAGAAAGGACAGGAGAATACGATGTaGCCACAGGCCTGCATGCCATGCTTCTGCTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SNSPKKGQENTM*PQACMPCFCCD Trigger: GTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTTTCTTGGGAGAGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CCA 72 bp | GGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTaGATTACTTCCGCAGCTGATAGTACAGCTGGTATC | + |
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Preference number: 3 (lower is better) Translates to: GTLVLSAQADKY*ITSAADSTAGI Trigger: GATACCAGCTGTACTATCAGCTGCGGAAGTAATCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR-3UTR CAA 90 bp | CTCTTTAGTCTTTGCACCCATTGGGTTTTTGATAAGTTTCAAGTAGTAATCGCTGGATGCCAGGCACCCTaGTGCTTTCTGCCCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LFSLCTHWVFDKFQVVIAGCQAP*CFLPRQ Trigger: CTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCC...AGCGATTACTACTTGAAACTTATCAAAAACCCAATGGGTGCAAAGACTAAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR GCA 72 bp | AATCATAGACTGGTCACACTGCCTCTCTTTAGTCTTTaGACCCATTGGGTTTTTGATAAGTTTCAAGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: NHRLVTLPLFSL*THWVFDKFQVV Trigger: TACTACTTGAAACTTATCAAAAACCCAATGGGTGCAAAGACTAAAGAGAGGCAGTGTGACCAGTCTATGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CCA 72 bp | AGGATTAGAAAGGGCCATCTGACCAGCTACTTCATTTaGGGCCAGATTAAAAATATTTATGTAGCTTATAAA | + |
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Preference number: 3 (lower is better) Translates to: RIRKGHLTSYFI*GQIKNIYVAYK Trigger: TTTATAAGCTACATAAATATTTTTAATCTGGCCCCAAATGAAGTAGCTGGTCAGATGGCCCTTTCTAATCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR CCA 90 bp | GGAATGCCAACGGGGAGGCCATCATTCTCTGGGAATGAGCCAGTCCCCAAGGGCGCCGCCAGGCGCCGCTaGACCTCGGCGGGCGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: GMPTGRPSFSGNEPVPKGAARRR*TSAGVK Trigger: TTTCACGCCCGCCGAGGTCCAGCGGCGCCTGGCGGC...GCCCTTGGGGACTGGCTCATTCCCAGAGAATGATGGCCTCCCCGTTGGCATTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR TCA 90 bp | GCTGTGACACCGGTCCCTCTGCTGCATGGGGAAGCCCCCAGGGAGCCCAGGGTTGACCCCCAGCAAAGATaGTGCCTCCCACGGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AVTPVPLLHGEAPREPRVDPQQR*CLPRSQ Trigger: CTGAGACCGTGGGAGGCATCATCTTTGCTGGGGGTC...AACCCTGGGCTCCCTGGGGGCTTCCCCATGCAGCAGAGGGACCGGTGTCACAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR TCA 90 bp | ATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGACACCGGTCCCTGCCGCACGAAGCTGGTaGGGTCGTAGAGGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: IRCGHRPACHASAVTPVPAARSW*GRRGWP Trigger: GGGCCAGCCTCTACGACCTCACCAGCTTCGTGCGGC...AGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR TCA 90 bp | AGGCACTTCTGGGAGGGTCCTGAGTGGGGCAGGTTTCTACCTGTGCAGATGGAGCATCCAGGTCGGCACTaGTGTCCTGGCCAGCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: RHFWEGPEWGRFLPVQMEHPGRH*CPGQPA Trigger: CGCGGGCTGGCCAGGACATCAGTGCCGACCTGGATG...CTCCATCTGCACAGGTAGAAACCTGCCCCACTCAGGACCCTCCCAGAAGTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| 3UTR CAA 72 bp | GATCCCCAAAGACAAGGGCCAGGGCTCCTGTCAGCCTaGCAGAGGATGCCAGGCACCCTTGTGCTTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: DPQRQGPGLLSA*QRMPGTLVLSA Trigger: GGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAGGCTGACAGGAGCCCTGGCCCTTGTCTTTGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR CCA 90 bp | GCTGTGACACCGGTCCCTCTGCTGCATGGGGAAGCCCCCAGGGAGCCCAGGGTTTGGAACAGGAAGCGGTaGATGACGTATTCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: AVTPVPLLHGEAPREPRVWNRKR*MTYSTK Trigger: CTTTGTGGAATACGTCATCCACCGCTTCCTGTTCCA...AACCCTGGGCTCCCTGGGGGCTTCCCCATGCAGCAGAGGGACCGGTGTCACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR TCA 90 bp | CTTGCAGAGGATGCCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTGGGCCTCGATGAGGTCTaGGTGGAAGAGGCGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: LAEDARHPCAFCPGRQVLGLDEV*VEEANG Trigger: CCCATTCGCCTCTTCCACTCAGACCTCATCGAGGCC...CAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR TCA 90 bp | GGGAGGCCATCATTCTCTGGGAATGAGCCAGTCCCCAAGGGCCACGGCTATCAACCAGGGGCACCCAGATaGTGGGGACACTATACCAGA | + |
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Preference number: 4 (lower is better) Translates to: GRPSFSGNEPVPKGHGYQPGAPR*WGHYTR Trigger: TCTGGTATAGTGTCCCCATCATCTGGGTGCCCCTGG...TTGATAGCCGTGGCCCTTGGGGACTGGCTCATTCCCAGAGAATGATGGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR CCA 90 bp | CTTGCAGAGGATGCCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTGCAGCACCATTCTCTGTaGGATCCTGCGGGTCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LAEDARHPCAFCPGRQVLQHHSL*DPAGPL Trigger: GAGCGGACCCGCAGGATCCCACAGAGAATGGTGCTG...CAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR CCA 90 bp | GTGGCTGTCCTGGGGTCTGGGAATGGCCTGTGGGAGGCATCATGCTGTTTCTTCTACTTCTCCCCCAAGTaGCCCACCTGCCACAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VAVLGSGNGLWEASCCFFYFSPK*PTCHSR Trigger: TCTGCTGTGGCAGGTGGGCCACTTGGGGGAGAAGTA...GAAGAAACAGCATGATGCCTCCCACAGGCCATTCCCAGACCCCAGGACAGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR CCA 90 bp | GGAATGCCAACGGGGAGGCCATCATTCTCTGGGAATGAGCCAGTCCCCAAGGGCTCAAACGGTGCCTTGTaGTGCTGGCCGTGCATGACA | + |
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Preference number: 4 (lower is better) Translates to: GMPTGRPSFSGNEPVPKGSNGAL*CWPCMT Trigger: TGTCATGCACGGCCAGCACCACAAGGCACCGTTTGA...GCCCTTGGGGACTGGCTCATTCCCAGAGAATGATGGCCTCCCCGTTGGCATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS-3UTR TCA 90 bp | AGGCACTTCTGGGAGGGTCCTGAGTGGGGCAGGTTTCTACCTGTGCAGATGGAGGCAGGGTCTGTCTTCTaGGTCTCTGCAGAGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RHFWEGPEWGRFLPVQMEAGSVF*VSAEAT Trigger: TGTAGCCTCTGCAGAGACTCAGAAGACAGACCCTGC...CTCCATCTGCACAGGTAGAAACCTGCCCCACTCAGGACCCTCCCAGAAGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | AGGCACTTCTGGGAGGGTCCTGAGTGGGGCAGGTTTCTACCTGTGCAGATGGAGCCCAGTCCACCACTTTaGACTGTGGCTCAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHFWEGPEWGRFLPVQMEPSPPL*TVAQEQ Trigger: CTGCTCTTGAGCCACAGTTCAAAGTGGTGGACTGGG...CTCCATCTGCACAGGTAGAAACCTGCCCCACTCAGGACCCTCCCAGAAGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGGAGAGGGTGGGTGATAAGGCACCACATACAAGTCCCTTCTTGGCTTCAGGGTAGTAGGACCAGCTaGGGTACAGCACCAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGRGWVIRHHIQVPSWLQGSRTS*GTAPGA Trigger: TGCCCCTGGTGCTGTACCTCAGCTGGTCCTACTACC...CTGAAGCCAAGAAGGGACTTGTATGTGGTGCCTTATCACCCACCCTCTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | CTTGCAGAGGATGCCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTGGGATGTTGTCCTGGGTaGGGGTTCGGTAGTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LAEDARHPCAFCPGRQVLGCCPG*GFGSRT Trigger: GGTCCTACTACCGAACCCTCACCCAGGACAACATCC...CAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR GCA 90 bp | ATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGACACCGGTCCCTCACAGCAGAGGTTTCTaGCAGTCCACCAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IRCGHRPACHASAVTPVPHSRGF*QSTRSL Trigger: CAAGGACCTGGTGGACTGGCAGAAACCTCTGCTGTG...AGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGCCCAAGTGGCCCACCTaGCACAGCAGAGGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KDRRIRCGHRPACHASAVPKWPT*HSRGFC Trigger: GCAGAAACCTCTGCTGTGGCAGGTGGGCCACTTGGG...CACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | AAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGTGGAGAAGGCCTCGATaGGGTCTGAGTGGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDRRIRCGHRPACHASAVWRRPR*GLSGRG Trigger: GCCTCTTCCACTCAGACCTCATCGAGGCCTTCTCCA...CACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCAGAGGATGCCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTGTCGATGAGGTCTGAGTaGAAGAGGCGAATGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAEDARHPCAFCPGRQVLSMRSE*KRRMGL Trigger: CAGGCCCATTCGCCTCTTCCACTCAGACCTCATCGA...CAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGTCCTGGGGTCTGGGAATGGCCTGTGGGAGGCATCATGCTGTTTCTTCCGGGTGGGCTTCCTCTaGAATGAGGGTGTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAVLGSGNGLWEASCCFFRVGFL*NEGVEK Trigger: TTTTTCCACACCCTCATTCCAGAGGAAGCCCACCCG...GAAGAAACAGCATGATGCCTCCCACAGGCCATTCCCAGACCCCAGGACAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| 3UTR CAA 72 bp | GGCTCCTGTCAGCCTTGCAGAGGATGCCAGGCACCCTaGTGCTTTCTGCCCAGGCAGACAAGTACTGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: GSCQPCRGCQAP*CFLPRQTSTGL Trigger: TAATCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCCTCTGCAAGGCTGACAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGAATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGACACCGCTGGCCACTGGTTGGTaGACCCACTCATCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRIRCGHRPACHASAVTPLATGW*THSSYF Trigger: GAAGTATGATGAGTGGGTTCACCAACCAGTGGCCAG...CGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCCATCATTCTCTGGGAATGAGCCAGTCCCCAAGGGCCACGGCTATCAACACCACTTTGAACTGTaGCTCAAGAGCAGGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRPSFSGNEPVPKGHGYQHHFEL*LKSRVC Trigger: ACAGACCCTGCTCTTGAGCCACAGTTCAAAGTGGTG...TTGATAGCCGTGGCCCTTGGGGACTGGCTCATTCCCAGAGAATGATGGCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | AAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGAATGGGCCTGGCCACTaGTTGGTGAACCCACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KDRRIRCGHRPACHASAVNGPGH*LVNPLI Trigger: GATGAGTGGGTTCACCAACCAGTGGCCAGGCCCATT...CACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCACCACATACAAGTCCCTTCTTGGCTTCAGGAGGCACTTCTGGGAGGGTCGGTGCCTTGTGGTGCTaGCCGTGCATGACAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KAPHTSPFLASGGTSGRVGALWC*PCMTKC Trigger: GCATTTTGTCATGCACGGCCAGCACCACAAGGCACC...GACCCTCCCAGAAGTGCCTCCTGAAGCCAAGAAGGGACTTGTATGTGGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| 3UTR CAA 72 bp | AGGGTGGGTGATAAGGCACCACATACAAGTCCCTTCTaGGCTTCAGGAGGCACTTCTGGGAGGGTCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGDKAPHTSPF*ASGGTSGRVLS Trigger: ACTCAGGACCCTCCCAGAAGTGCCTCCTGAAGCCAAGAAGGGACTTGTATGTGGTGCCTTATCACCCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTGGATTACTTGCACAAAGAGGCCTATaGACACCGACTCCGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GCQAPLCFLPRQTSTGLLAQRGL*TPTPAS Trigger: TGATGCCGGAGTCGGTGTTCATAGGCCTCTTTGTGC...AAGTAATCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGGAGAATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGAACGGTGCCTTGTGGTaGTGGCCGTGCATGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KDRRIRCGHRPACHASAVNGALW*WPCMTK Trigger: TTTTGTCATGCACGGCCAGCACCACAAGGCACCGTT...CACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTATTCTCCTGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR GCA 90 bp | GGTGGGAGAGGGTGGGTGATAAGGCACCACATACAAGTCCCTTCTTGGCTTCAGTGTCTTCTGAGTCTCTaGAGAGGCTACAGCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGWVIRHHIQVPSWLQCLLSL*RGYSTI Trigger: AATGGTGCTGTAGCCTCTGCAGAGACTCAGAAGACA...CTGAAGCCAAGAAGGGACTTGTATGTGGTGCCTTATCACCCACCCTCTCCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCCAGGCACCCTTGTGCTTTCTGCCCAGGCAGACAAGTACTGGATTACTTGGGCTTCCTCTGGAATaGGGGTGTGGAAAAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GCQAPLCFLPRQTSTGLLGLPLE*GCGKSN Trigger: ATTACTTTTTCCACACCCTCATTCCAGAGGAAGCCC...AAGTAATCCAGTACTTGTCTGCCTGGGCAGAAAGCACAAGGGTGCCTGGCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | CAAATCATAGACTGGTCACACTGCCTCTCTTTAGTCTTTGCACCCATTGGGTTTGGAGTGTCTGTGAGGTaGCCCATCCAGGTCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QIIDWSHCLSLVFAPIGFGVSVR*PIQVGT Trigger: AGTGCCGACCTGGATGGGCCACCTCACAGACACTCC...AAACCCAATGGGTGCAAAGACTAAAGAGAGGCAGTGTGACCAGTCTATGATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | CAAATCATAGACTGGTCACACTGCCTCTCTTTAGTCTTTGCACCCATTGGGTTTGTAGGAGCCCTTGTGTaGAGAGCCGAAGTGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QIIDWSHCLSLVFAPIGFVGALV*RAEVQV Trigger: TACCTGCACTTCGGCTCTCCACACAAGGGCTCCTAC...AAACCCAATGGGTGCAAAGACTAAAGAGAGGCAGTGTGACCAGTCTATGATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGCTCAATACATAGGATTAGAAAGGGCCATCTGACCAGCTACTTCATTTGGAGTGGAAGAGGCGAATaGGCCTGGCCACTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISSIHRIRKGHLTSYFIWSGRGE*AWPLVG Trigger: ACCAACCAGTGGCCAGGCCCATTCGCCTCTTCCACT...CCAAATGAAGTAGCTGGTCAGATGGCCCTTTCTAATCCTATGTATTGAGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGCTCAATACATAGGATTAGAAAGGGCCATCTGACCAGCTACTTCATTTGGGGTAATGGCTGTTGCTaGGGGGCTTCATATGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ISSIHRIRKGHLTSYFIWGNGCC*GASYGT Trigger: TGTTCCATATGAAGCCCCCCAGCAACAGCCATTACC...CCAAATGAAGTAGCTGGTCAGATGGCCCTTTCTAATCCTATGTATTGAGCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTTAGTCTTTGCACCCATTGGGTTTTTGATAAGTTTCAAGTAGTAATCGCTTTGAATACTCTCTTGTaGGTGATGCGAAGAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFSLCTHWVFDKFQVVIALNTLL*VMRRAG Trigger: TCCGGCTCTTCGCATCACTCACAAGAGAGTATTCAA...AGCGATTACTACTTGAAACTTATCAAAAACCCAATGGGTGCAAAGACTAAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS CCA 90 bp | GTACTGCTCCAGCCAGCGGCGGGCGTTGTCGGAGTGTCTGTGAGGTaGCCCATCCAGGTCGGCACTGATGTCCTGGCCAGCCCGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLQPAAGVVGVSVR*PIQVGTDVLASPRQ Trigger: CTGGCGCGGGCTGGCCAGGACATCAGTGCCGACCTGGATGGGCCACCTCACAGACACTCCGACAACGCCCGCCGCTGGCTGGAGCAGTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGTCCTGGGGTCTGGGAATGGCCTGTGGGAGGCATCATGCTGTTTCTTCGCGAAGAGCCGGATGTaGTCCTGGGTGAGGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VAVLGSGNGLWEASCCFFAKSRM*SWVRVR Trigger: CCGAACCCTCACCCAGGACAACATCCGGCTCTTCGC...GAAGAAACAGCATGATGCCTCCCACAGGCCATTCCCAGACCCCAGGACAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGTCCTGGGGTCTGGGAATGGCCTGTGGGAGGCATCATGCTGTTTCTTCCCATCAAACGGTGCCTaGTGGTGCTGGCCGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VAVLGSGNGLWEASCCFFPSNGA*WCWPCM Trigger: CATGCACGGCCAGCACCACAAGGCACCGTTTGATGG...GAAGAAACAGCATGATGCCTCCCACAGGCCATTCCCAGACCCCAGGACAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 90 bp | ATGAGGTCTGAGTGGAAGAGGCGAATGGGCCTGGCCACTGGTTGGTaGACCCACTCATCATACTTCTCCCCCAAGTGGCCCACCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MRSEWKRRMGLATGW*THSSYFSPKWPTCH Trigger: GTGGCAGGTGGGCCACTTGGGGGAGAAGTATGATGAGTGGGTTCACCAACCAGTGGCCAGGCCCATTCGCCTCTTCCACTCAGACCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGTCCTGGGGTCTGGGAATGGCCTGTGGGAGGCATCATGCTGTTTCTTCCAGTCCACCAGGTCCTaGTCCCAGTCCACCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAVLGSGNGLWEASCCFFQSTRS*SQSTTL Trigger: CAAAGTGGTGGACTGGGACAAGGACCTGGTGGACTG...GAAGAAACAGCATGATGCCTCCCACAGGCCATTCCCAGACCCCAGGACAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 90 bp | GGGGACACTATACCAGACAGTCTTGGAGAAGGCCTCGATGAGGTCTaGGTGGAAGAGGCGAATGGGCCTGGCCACTGGTTGGTGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GDTIPDSLGEGLDEV*VEEANGPGHWLVNP Trigger: TGGGTTCACCAACCAGTGGCCAGGCCCATTCGCCTCTTCCACTCAGACCTCATCGAGGCCTTCTCCAAGACTGTCTGGTATAGTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS CCA 90 bp | GGTCTGTCTTCTGAGTCTCTGCAGAGGCTACAGCACCATTCTCTGTaGGATCCTGCGGGTCCGCTCGCAGTTCGCCCACATAGTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLSSESLQRLQHHSL*DPAGPLAVRPHSTA Trigger: AGCAGTACTATGTGGGCGAACTGCGAGCGGACCCGCAGGATCCCACAGAGAATGGTGCTGTAGCCTCTGCAGAGACTCAGAAGACAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS CCA 90 bp | CTGCCAGTCCACCAGGTCCTTGTCCCAGTCCACCACTTTGAACTGTaGCTCAAGAGCAGGGTCTGTCTTCTGAGTCTCTGCAGAGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPVHQVLVPVHHFEL*LKSRVCLLSLCRGY Trigger: GTAGCCTCTGCAGAGACTCAGAAGACAGACCCTGCTCTTGAGCCACAGTTCAAAGTGGTGGACTGGGACAAGGACCTGGTGGACTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CAA 90 bp | AAGGCACCACATACAAGTCCCTTCTTGGCTTCAGGAGGCACTTCTGGGAGGGTCGGGCCTGGCCACTGGTaGGTGAACCCACTCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: KAPHTSPFLASGGTSGRVGPGHW*VNPLII Trigger: TATGATGAGTGGGTTCACCAACCAGTGGCCAGGCCC...GACCCTCCCAGAAGTGCCTCCTGAAGCCAAGAAGGGACTTGTATGTGGTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS-3UTR CAA 90 bp | ATACGATGTGGCCACAGGCCTGCATGCCATGCTTCTGCTGTGACACCGGTCCCTCTATACCAGACAGTCTaGGAGAAGGCCTCGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IRCGHRPACHASAVTPVPLYQTV*EKASMR Trigger: CCTCATCGAGGCCTTCTCCAAGACTGTCTGGTATAG...AGGGACCGGTGTCACAGCAGAAGCATGGCATGCAGGCCTGTGGCCACATCGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 90 bp | GAGGTTTCTGCCAGTCCACCAGGTCCTTGTCCCAGTCCACCACTTTaGACTGTGGCTCAAGAGCAGGGTCTGTCTTCTGAGTCTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVSASPPGPCPSPPL*TVAQEQGLSSESLQ Trigger: CTGCAGAGACTCAGAAGACAGACCCTGCTCTTGAGCCACAGTTCAAAGTGGTGGACTGGGACAAGGACCTGGTGGACTGGCAGAAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 90 bp | CAGTCCACCACTTTGAACTGTGGCTCAAGAGCAGGGTCTGTCTTCTaGGTCTCTGCAGAGGCTACAGCACCATTCTCTGTGGGATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSTTLNCGSRAGSVF*VSAEATAPFSVGSC Trigger: GCAGGATCCCACAGAGAATGGTGCTGTAGCCTCTGCAGAGACTCAGAAGACAGACCCTGCTCTTGAGCCACAGTTCAAAGTGGTGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS CCA 72 bp | CAGCCAGCGGCGGGCGTTGTCGGAGTGTCTGTGAGGTaGCCCATCCAGGTCGGCACTGATGTCCTGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QPAAGVVGVSVR*PIQVGTDVLAS Trigger: GCTGGCCAGGACATCAGTGCCGACCTGGATGGGCCACCTCACAGACACTCCGACAACGCCCGCCGCTGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 72 bp | TGCTCCAGCCAGCGGCGGGCGTTGTCGGAGTGTCTGTaGGGTGGCCCATCCAGGTCGGCACTGATGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CSSQRRALSECL*GGPSRSALMSW Trigger: CCAGGACATCAGTGCCGACCTGGATGGGCCACCTCACAGACACTCCGACAACGCCCGCCGCTGGCTGGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS GCA 72 bp | TCCCCCAAGTGGCCCACCTGCCACAGCAGAGGTTTCTaGCAGTCCACCAGGTCCTTGTCCCAGTCCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: SPKWPTCHSRGF*QSTRSLSQSTT Trigger: AGTGGTGGACTGGGACAAGGACCTGGTGGACTGGCAGAAACCTCTGCTGTGGCAGGTGGGCCACTTGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 72 bp | GAGTGGAAGAGGCGAATGGGCCTGGCCACTGGTTGGTaGACCCACTCATCATACTTCTCCCCCAAGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EWKRRMGLATGW*THSSYFSPKWP Trigger: GGGCCACTTGGGGGAGAAGTATGATGAGTGGGTTCACCAACCAGTGGCCAGGCCCATTCGCCTCTTCCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS GCA 72 bp | ACCCACTCATCATACTTCTCCCCCAAGTGGCCCACCTaGCACAGCAGAGGTTTCTGCCAGTCCACCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: THSSYFSPKWPT*HSRGFCQSTRS Trigger: GGACCTGGTGGACTGGCAGAAACCTCTGCTGTGGCAGGTGGGCCACTTGGGGGAGAAGTATGATGAGTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS CCA 72 bp | TCTGAGTCTCTGCAGAGGCTACAGCACCATTCTCTGTaGGATCCTGCGGGTCCGCTCGCAGTTCGCCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SESLQRLQHHSL*DPAGPLAVRPH Trigger: ATGTGGGCGAACTGCGAGCGGACCCGCAGGATCCCACAGAGAATGGTGCTGTAGCCTCTGCAGAGACTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 72 bp | ATACCAGACAGTCTTGGAGAAGGCCTCGATGAGGTCTaGGTGGAAGAGGCGAATGGGCCTGGCCACTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IPDSLGEGLDEV*VEEANGPGHWL Trigger: CAACCAGTGGCCAGGCCCATTCGCCTCTTCCACTCAGACCTCATCGAGGCCTTCTCCAAGACTGTCTGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 72 bp | GGACACTATACCAGACAGTCTTGGAGAAGGCCTCGATaGGGTCTGAGTGGAAGAGGCGAATGGGCCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GHYTRQSWRRPR*GLSGRGEWAWP Trigger: TGGCCAGGCCCATTCGCCTCTTCCACTCAGACCTCATCGAGGCCTTCTCCAAGACTGTCTGGTATAGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS CCA 72 bp | CACCAGGTCCTTGTCCCAGTCCACCACTTTGAACTGTaGCTCAAGAGCAGGGTCTGTCTTCTGAGTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HQVLVPVHHFEL*LKSRVCLLSLC Trigger: GCAGAGACTCAGAAGACAGACCCTGCTCTTGAGCCACAGTTCAAAGTGGTGGACTGGGACAAGGACCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS GCA 72 bp | AAGACCAGACGGGAGCCATCAAACGGTGCCTTGTGGTaGTGGCCGTGCATGACAAAATGCAACATGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KTRREPSNGALW*WPCMTKCNMMR Trigger: CCTCATCATGTTGCATTTTGTCATGCACGGCCAGCACCACAAGGCACCGTTTGATGGCTCCCGTCTGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS CCA 72 bp | GTGGGCCTTCATGTTGTACAGGTAGGAGCCCTTGTGTaGAGAGCCGAAGTGCAGGTAGTAATGTGTCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGLHVVQVGALV*RAEVQVVMCHV Trigger: GACATGACACATTACTACCTGCACTTCGGCTCTCCACACAAGGGCTCCTACCTGTACAACATGAAGGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
||
| CDS TCA 72 bp | ACTTTGAACTGTGGCTCAAGAGCAGGGTCTGTCTTCTaGGTCTCTGCAGAGGCTACAGCACCATTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TLNCGSRAGSVF*VSAEATAPFSV Trigger: CACAGAGAATGGTGCTGTAGCCTCTGCAGAGACTCAGAAGACAGACCCTGCTCTTGAGCCACAGTTCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS TCA 72 bp | GTGCTGATGCCAAACCCTGATTTCTGGTATTCGAAGTaGTGCTTGACATGGTGGGCCTTCATGTTGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: VLMPNPDFWYSK*CLTWWAFMLYR Trigger: CCTGTACAACATGAAGGCCCACCATGTCAAGCATCACTTCGAATACCAGAAATCAGGGTTTGGCATCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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| CDS TCA 72 bp | AAAGTAATCCCACAGTTTAGTGCTGATGCCAAACCCTaGTTTCTGGTATTCGAAGTGATGCTTGACATGGTG | + |
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Preference number: 6 (lower is better) Translates to: KVIPQFSADAKP*FLVFEVMLDMV Trigger: CACCATGTCAAGCATCACTTCGAATACCAGAAATCAGGGTTTGGCATCAGCACTAAACTGTGGGATTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038475.9 |
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