Pregenerated sensors for F7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031443Ensembl transcript IDs: ENSMUST00000033820.4
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTACGTGCTCATGTGCATACCTACTGTGTAGTACTGCAGACCGAATaGATGCAGACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LRAHVHTYCVVLQTE*MQTGGSYGETGARP Trigger: AGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGTCTGCATGCATTCGGTCTGCAGTACTACACAGTAGGTATGCACATGAGCACGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| 3UTR GCA 72 bp | CATGTGCATACCTACTGTGTAGTACTGCAGACCGAATaGATGCAGACAGGAGGCAGCTACGGGGAGACGGGA | + |
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Preference number: 3 (lower is better) Translates to: HVHTYCVVLQTE*MQTGGSYGETG Trigger: TCCCGTCTCCCCGTAGCTGCCTCCTGTCTGCATGCATTCGGTCTGCAGTACTACACAGTAGGTATGCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| 3UTR GCA 72 bp | CACGCACATGCATGCGGCACATTCACGTGTCCTACGTaGTCATGTGCATACCTACTGTGTAGTACTGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: HAHACGTFTCPT*SCAYLLCSTAD Trigger: GTCTGCAGTACTACACAGTAGGTATGCACATGAGCACGTAGGACACGTGAATGTGCCGCATGCATGTGCGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | GCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGGACACCCCACGGTCCAGTAGCTaGCCCCAGCCACTGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: AATGRREQGLSLASLRDTPRSSS*PQPLTL Trigger: AAGGGTCAGTGGCTGGGGCCAGCTACTGGACCGTGG...GGTGTCCCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | CAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGGAGCTGTGCTTGGCGTaGTCCAGACAGTCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QEAATGRREQGLSLASLRELCLA*SRQSWV Trigger: GACCCAGGACTGTCTGGAGCACGCCAAGCACAGCTC...CCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | GCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGGACACCCAGCACAGCCTGCCATaGACACTCCCCTTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AATGRREQGLSLASLRDTQHSLP*TLPFGA Trigger: TGCCCCAAAGGGGAGTGTCCATGGCAGGCTGTGCTG...GGTGTCCCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR TCA 90 bp | ACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGTCCTCTCAGGGCTCTTaGAGATCTCCCGGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TGGSYGETGARPEPRLPQSSQGS*RSPGPP Trigger: AGGAGGCCCGGGAGATCTTCAAGAGCCCTGAGAGGA...CTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | GCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGGACACCGGGGTGTTAGAGCTGTaGTTGGCGTGCTCCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: AATGRREQGLSLASLRDTGVLEL*LACSRQ Trigger: CTGTCTGGAGCACGCCAAGCACAGCTCTAACACCCC...GGTGTCCCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | ACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGCCTCCAGGAGTGAGTTaGCACGCCTTTGCCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: TGGSYGETGARPEPRLPQPPGVS*HAFACV Trigger: TACACAGGCAAAGGCGTGCCAACTCACTCCTGGAGG...CTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | CAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGAGCCAGTCTATGTACTaGGAGACCCTGGTGTACACC | + |
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Preference number: 4 (lower is better) Translates to: QEAATGRREQGLSLASLRSQSMY*ETLVYT Trigger: GGTGTACACCAGGGTCTCCCAGTACATAGACTGGCT...CCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | TGCATGCAGACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCAGAGGTCCCTGGAGCTaGAGCAGAAAGCAGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CMQTGGSYGETGARPEPRRGPWS*SRKQRS Trigger: GCTTCTCTGCTTTCTGCTCCAGCTCCAGGGACCTCT...GCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGTCTGCATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | CAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGTGGTCCCTGCAGTACTaGTCACAGTCACCATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QEAATGRREQGLSLASLRWSLQY*SQSPFS Trigger: TGAAAATGGTGACTGTGACCAGTACTGCAGGGACCA...CCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR TCA 90 bp | TGCATGCAGACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCCCCATCCTTCTCACTaGAGTCATGTTCACCCATCA | + |
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Preference number: 4 (lower is better) Translates to: CMQTGGSYGETGARPEPRPHPSH*SHVHPS Trigger: TGATGGGTGAACATGACTTCAGTGAGAAGGATGGGG...GCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGTCTGCATGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | TGCATGCAGACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCAGCACTGTTCCTCATTaGACTCTCTCTCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CMQTGGSYGETGARPEPRSTVPH*TLSPES Trigger: GCTCTCTGGAGAGAGAGTGCAATGAGGAACAGTGCT...GCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGTCTGCATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | CAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGACTCAACTTTTGGTTTaGAGGACACCTCATCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QEAATGRREQGLSLASLRTQLLV*RTPHLA Trigger: AGCCAGATGAGGTGTCCTGCAAACCAAAAGTTGAGT...CCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR TCA 90 bp | TGCATGCAGACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCACAGCAATAACCCATTaGTTTTCAGCACAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CMQTGGSYGETGARPEPRTAITH*FSAQPA Trigger: GGCAGGCTGTGCTGAAAATCAATGGGTTATTGCTGT...GCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGTCTGCATGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | CAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGTTTGCACAGATCAGCTaGTCATTCTTGCTTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QEAATGRREQGLSLASLRFAQIS*SFLLFS Trigger: TGAGAAAAGCAAGAATGAGCAGCTGATCTGTGCAAA...CCTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | GAATGCATGCAGACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTTCAGCTGCTCATTCTTaGTTTTCTCACAGTTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: ECMQTGGSYGETGARPEPSAAHS*FSHSSD Trigger: GTCGGAACTGTGAGAAAAGCAAGAATGAGCAGCTGA...AGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGTCTGCATGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR TCA 90 bp | TTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCTGCTGGCCCCAGCCACTaGCCCTTGAGAAGCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: LSHSLPLHKNSRKVHRTAAGPSH*PLRSGF Trigger: GAATCCGCTTCTCAAGGGTCAGTGGCTGGGGCCAGC...AGCTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | TCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAATGCTCCAGACAGTCCTaGGTCATCAGCCGGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: SLYLILFPYTRIAGKSIECSRQS*VISRGT Trigger: GGTGCCCCGGCTGATGACCCAGGACTGTCTGGAGCA...TTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | CTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCTTTGGGGCACACGTTaGCTCCCACAATGCGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LYLILFPYTRIAGKSIEQLWGTR*LPQCGL Trigger: AAGGCCGCATTGTGGGAGGCAACGTGTGCCCCAAAG...CTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | CTCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAATGGACACTCCCCTTTaGGGCACACGTTGCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSLSHSLPLHKNSRKVHRMDTPL*GTRCLP Trigger: TGGGAGGCAACGTGTGCCCCAAAGGGGAGTGTCCAT...TCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | TCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAATGCCATGGTAGTGCGTaGCATGTGGGCCACCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLYLILFPYTRIAGKSIECHGSA*HVGHRC Trigger: ACAGCGGTGGCCCACATGCCACGCACTACCATGGCA...TTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | TCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAAGTCCCTAGAGGTCCCTaGAGCTGGAGCAGAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLYLILFPYTRIAGKSIEVPRGP*SWSRKQ Trigger: CTGCTTTCTGCTCCAGCTCCAGGGACCTCTAGGGAC...TTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR TCA 90 bp | TCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGGTACCTCCGTTCTaGCATGGATTCGAGGCACAC | + |
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Preference number: 4 (lower is better) Translates to: SLYLILFPYTRIAGKSIEQVPPF*HGFEAH Trigger: GTGTGCCTCGAATCCATGTCAGAACGGAGGTACCTG...TTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | TTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCTGAGTTGGCACGCCTTTaGCTGTGTAGGACACCATGT | + |
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Preference number: 4 (lower is better) Translates to: LSHSLPLHKNSRKVHRTAELARL*LCRTPC Trigger: ACATGGTGTCCTACACAGGCAAAGGCGTGCCAACTC...AGCTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | TTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCTACCTCCGTTCTGACATaGATTCGAGGCACACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSHSLPLHKNSRKVHRTATSVLT*IRGTLV Trigger: GACCAGTGTGCCTCGAATCCATGTCAGAACGGAGGT...AGCTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | CTCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGATGTACTGGGAGACCCTaGTGTACACCCCAATGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LSLSHSLPLHKNSRKVHRCTGRP*CTPQCD Trigger: GTCACATTGGGGTGTACACCAGGGTCTCCCAGTACA...TCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | TTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCTCGGAAAACCCCAACCTaGAGCTTGGAGTCCATGTGT | + |
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Preference number: 4 (lower is better) Translates to: LSHSLPLHKNSRKVHRTARKTPT*SLESMC Trigger: ACACATGGACTCCAAGCTCCAGGTTGGGGTTTTCCG...AGCTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR TCA 90 bp | CTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCTTCCTCCTGGGTTATaGAAACTGCAGTCCCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: LYLILFPYTRIAGKSIEQLPPGL*KLQSLE Trigger: CTCTAGGGACTGCAGTTTTCATAACCCAGGAGGAAG...CTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | CTCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGATTGAGAAGCGGATTCTaGCTAGGGTGTTCTCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LSLSHSLPLHKNSRKVHRLRSGF*LGCSRR Trigger: TCTCCGAGAACACCCTAGCCAGAATCCGCTTCTCAA...TCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | TCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAAATTTTCAGCACAGCCTaGCATGGACACTCCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLYLILFPYTRIAGKSIEIFSTA*HGHSPL Trigger: CAAAGGGGAGTGTCCATGGCAGGCTGTGCTGAAAAT...TTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CCA 90 bp | CTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCGGGTACTCAACTTTTaGTTTGCAGGACACCTCATC | + |
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Preference number: 4 (lower is better) Translates to: LYLILFPYTRIAGKSIEQRVLNF*FAGHLI Trigger: GATGAGGTGTCCTGCAAACCAAAAGTTGAGTACCCG...CTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR GCA 90 bp | CTCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAGTCACCATTTTCATTTaGACAGATCAGCTGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: LSLSHSLPLHKNSRKVHRVTIFI*TDQLLI Trigger: AATGAGCAGCTGATCTGTGCAAATGAAAATGGTGAC...TCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CAA 90 bp | ACAGGAGGCAGCTACGGGGAGACGGGAGCAAGGCCTGAGCCTCGCCTCCCTCAGGTCCTCTCAGGGCTCTaGAAGATCTCCCGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TGGSYGETGARPEPRLPQVLSGL*KISRAS Trigger: GGAGGCCCGGGAGATCTTCAAGAGCCCTGAGAGGAC...CTGAGGGAGGCGAGGCTCAGGCCTTGCTCCCGTCTCCCCGTAGCTGCCTCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 90 bp | GCTCCAGACAGTCCTGGGTCATCAGCCGGGGCACCTCGATGGACATaGGTTCCAGGGCTGTGGCACCACGGTCCAGTAGCTGGCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: APDSPGSSAGAPRWT*VPGLWHHGPVAGPS Trigger: GCTGGGGCCAGCTACTGGACCGTGGTGCCACAGCCCTGGAACTCATGTCCATCGAGGTGCCCCGGCTGATGACCCAGGACTGTCTGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 90 bp | GTTCCAGGGCTGTGGCACCACGGTCCAGTAGCTGGCCCCAGCCACTaGCCCTTGAGAAGCGGATTCTGGCTAGGGTGTTCTCGGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: VPGLWHHGPVAGPSH*PLRSGFWLGCSRRR Trigger: CCTTCTCCGAGAACACCCTAGCCAGAATCCGCTTCTCAAGGGTCAGTGGCTGGGGCCAGCTACTGGACCGTGGTGCCACAGCCCTGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 90 bp | TCGATGGACATGAGTTCCAGGGCTGTGGCACCACGGTCCAGTAGCTaGCCCCAGCCACTGACCCTTGAGAAGCGGATTCTGGCTAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SMDMSSRAVAPRSSS*PQPLTLEKRILARV Trigger: CACCCTAGCCAGAATCCGCTTCTCAAGGGTCAGTGGCTGGGGCCAGCTACTGGACCGTGGTGCCACAGCCCTGGAACTCATGTCCATCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 90 bp | CGGAGAAGGACTTTTCAGGCAGACACAGGGGCACCACGTAGTCAGTaGAGGTCACAGGCCGGTGAAGGCGGAGCAGGGCAATGTCGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RRRTFQADTGAPRSQ*RSQAGEGGAGQCRG Trigger: ACCACGACATTGCCCTGCTCCGCCTTCACCGGCCTGTGACCTTCACTGACTACGTGGTGCCCCTGTGTCTGCCTGAAAAGTCCTTCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 90 bp | ACTCTCTCTCCAGAGAGCCGGGCCAAAGCTCCTCCAGGAGTGAGTTaGCACGCCTTTGCCTGTGTAGGACACCATGTGCTTCCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: TLSPESRAKAPPGVS*HAFACVGHHVLPPG Trigger: CCCAGGAGGAAGCACATGGTGTCCTACACAGGCAAAGGCGTGCCAACTCACTCCTGGAGGAGCTTTGGCCCGGCTCTCTGGAGAGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 90 bp | ATGTGCCATGGTAGTGCGTGGCATGTGGGCCACCGCTGTCACCCTTaGAGGCGTCCTTGGTACCATCCATGTAGCCAGCGCAGAACATGT | + |
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Preference number: 5 (lower is better) Translates to: MCHGSAWHVGHRCHP*RRPWYHPCSQRRTC Trigger: ACATGTTCTGCGCTGGCTACATGGATGGTACCAAGGACGCCTGCAAGGGTGACAGCGGTGGCCCACATGCCACGCACTACCATGGCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 90 bp | TCCTCCTGGGTTATGAAAACTGCAGTCCCTAGAGGTCCCTGGAGCTaGAGCAGAAAGCAGAGAAGCAGCAGCCCATGCGCCTGTGGAACC | + |
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Preference number: 5 (lower is better) Translates to: SSWVMKTAVPRGPWS*SRKQRSSSPCACGT Trigger: GGTTCCACAGGCGCATGGGCTGCTGCTTCTCTGCTTTCTGCTCCAGCTCCAGGGACCTCTAGGGACTGCAGTTTTCATAACCCAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 90 bp | TGTGCTTCCTCCTGGGTTATGAAAACTGCAGTCCCTAGAGGTCCCTaGAGCTGGAGCAGAAAGCAGAGAAGCAGCAGCCCATGCGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: CASSWVMKTAVPRGP*SWSRKQRSSSPCAC Trigger: ACAGGCGCATGGGCTGCTGCTTCTCTGCTTTCTGCTCCAGCTCCAGGGACCTCTAGGGACTGCAGTTTTCATAACCCAGGAGGAAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 90 bp | AGAGAGCCGGGCCAAAGCTCCTCCAGGAGTGAGTTGGCACGCCTTTaGCTGTGTAGGACACCATGTGCTTCCTCCTGGGTTATGAAAACT | + |
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Preference number: 5 (lower is better) Translates to: REPGQSSSRSELARL*LCRTPCASSWVMKT Trigger: AGTTTTCATAACCCAGGAGGAAGCACATGGTGTCCTACACAGGCAAAGGCGTGCCAACTCACTCCTGGAGGAGCTTTGGCCCGGCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 90 bp | CATCACTGTAAACAATCCAGAACTGCTTGGTCCTCTCAGGGCTCTTaGAGATCTCCCGGGCCTCCTCAAAGGAGCACTGTTCCTCATTGC | + |
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Preference number: 5 (lower is better) Translates to: HHCKQSRTAWSSQGS*RSPGPPQRSTVPHC Trigger: GCAATGAGGAACAGTGCTCCTTTGAGGAGGCCCGGGAGATCTTCAAGAGCCCTGAGAGGACCAAGCAGTTCTGGATTGTTTACAGTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 90 bp | AGTTCCGACCCTCAAAGTCTAGGAGGCAGAAGCAGACGTAAGACTTaGGATGATCCTGGCAGGTACCTCCGTTCTGACATGGATTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: SSDPQSLGGRSRRKT*DDPGRYLRSDMDSR Trigger: CCTCGAATCCATGTCAGAACGGAGGTACCTGCCAGGATCATCTCAAGTCTTACGTCTGCTTCTGCCTCCTAGACTTTGAGGGTCGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 90 bp | AGTCCTCATGACAGCTACAGGTACGCTTGGTCCCTACATGGTCCCTaGAGTACTGGTCACAGTCACCATTTTCATTTGCACAGATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SPHDSYRYAWSLHGP*STGHSHHFHLHRSA Trigger: AGCTGATCTGTGCAAATGAAAATGGTGACTGTGACCAGTACTGCAGGGACCATGTAGGGACCAAGCGTACCTGTAGCTGTCATGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 90 bp | GACGTAAGACTTGAGATGATCCTGGCAGGTACCTCCGTTCTGACATaGATTCGAGGCACACTGGTCCCCATCACTGTAAACAATCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: DVRLEMILAGTSVLT*IRGTLVPITVNNPE Trigger: TTCTGGATTGTTTACAGTGATGGGGACCAGTGTGCCTCGAATCCATGTCAGAACGGAGGTACCTGCCAGGATCATCTCAAGTCTTACGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 90 bp | TTTCTACAACAGGTATTCTCCCACACGGGTACTCAACTTTTGGTTTaGAGGACACCTCATCTGGCTGTAGCGTGTAGTCCTCATGACAGC | + |
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Preference number: 5 (lower is better) Translates to: FLQQVFSHTGTQLLV*RTPHLAVACSPHDS Trigger: GCTGTCATGAGGACTACACGCTACAGCCAGATGAGGTGTCCTGCAAACCAAAAGTTGAGTACCCGTGTGGGAGAATACCTGTTGTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CAA 90 bp | TTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCTCCTTTGGGGCACACGTaGCCTCCCACAATGCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LSHSLPLHKNSRKVHRTAPLGHT*PPTMRP Trigger: AGGCCGCATTGTGGGAGGCAACGTGTGCCCCAAAGG...AGCTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CAA 90 bp | CTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGCATGGACACTCCCCTTaGGGGCACACGTTGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LYLILFPYTRIAGKSIEQHGHSP*GHTLPP Trigger: GGGAGGCAACGTGTGCCCCAAAGGGGAGTGTCCATG...CTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CAA 90 bp | CTCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAATCCAGAACTGCTaGGTCCTCTCAGGGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LSLSHSLPLHKNSRKVHRTIQNC*VLSGLL Trigger: CAAGAGCCCTGAGAGGACCAAGCAGTTCTGGATTGT...TCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CAA 90 bp | CTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAACAGACGGGTACTCAACTTTaGGTTTGCAGGACACCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LYLILFPYTRIAGKSIEQTGTQL*VCRTPH Trigger: ATGAGGTGTCCTGCAAACCAAAAGTTGAGTACCCGT...CTGTTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS-3UTR CAA 90 bp | TCTCTTTATCTCATTCTCTTCCCTTACACAAGAATAGCAGGAAAGTCCATAGAAATCAGCTGCTCATTCTaGCTTTTCTCACAGTTCCGA | + |
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Preference number: 5 (lower is better) Translates to: SLYLILFPYTRIAGKSIEISCSF*LFSQFR Trigger: TCGGAACTGTGAGAAAAGCAAGAATGAGCAGCTGAT...TTCTATGGACTTTCCTGCTATTCTTGTGTAAGGGAAGAGAATGAGATAAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 72 bp | GGTAGTGCGTGGCATGTGGGCCACCGCTGTCACCCTTaGAGGCGTCCTTGGTACCATCCATGTAGCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GSAWHVGHRCHP*RRPWYHPCSQR Trigger: GCGCTGGCTACATGGATGGTACCAAGGACGCCTGCAAGGGTGACAGCGGTGGCCCACATGCCACGCACTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 72 bp | AGTCCTGGGTCATCAGCCGGGGCACCTCGATGGACATaGGTTCCAGGGCTGTGGCACCACGGTCCAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPGSSAGAPRWT*VPGLWHHGPVA Trigger: AGCTACTGGACCGTGGTGCCACAGCCCTGGAACTCATGTCCATCGAGGTGCCCCGGCTGATGACCCAGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 72 bp | CTGTGGCACCACGGTCCAGTAGCTGGCCCCAGCCACTaGCCCTTGAGAAGCGGATTCTGGCTAGGGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LWHHGPVAGPSH*PLRSGFWLGCS Trigger: AGAACACCCTAGCCAGAATCCGCTTCTCAAGGGTCAGTGGCTGGGGCCAGCTACTGGACCGTGGTGCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 72 bp | ATGAGTTCCAGGGCTGTGGCACCACGGTCCAGTAGCTaGCCCCAGCCACTGACCCTTGAGAAGCGGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: MSSRAVAPRSSS*PQPLTLEKRIL Trigger: CAGAATCCGCTTCTCAAGGGTCAGTGGCTGGGGCCAGCTACTGGACCGTGGTGCCACAGCCCTGGAACTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 72 bp | CCACACCTGTCAGATACCATGTGCCATGGTAGTGCGTaGCATGTGGGCCACCGCTGTCACCCTTGCAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: PHLSDTMCHGSA*HVGHRCHPCRR Trigger: ACGCCTGCAAGGGTGACAGCGGTGGCCCACATGCCACGCACTACCATGGCACATGGTATCTGACAGGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 72 bp | CCAGAGAGCCGGGCCAAAGCTCCTCCAGGAGTGAGTTaGCACGCCTTTGCCTGTGTAGGACACCATGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PESRAKAPPGVS*HAFACVGHHVL Trigger: AAGCACATGGTGTCCTACACAGGCAAAGGCGTGCCAACTCACTCCTGGAGGAGCTTTGGCCCGGCTCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 72 bp | GTGTTAGAGCTGTGCTTGGCGTGCTCCAGACAGTCCTaGGTCATCAGCCGGGGCACCTCGATGGACATGAGT | + |
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Preference number: 6 (lower is better) Translates to: VLELCLACSRQS*VISRGTSMDMS Trigger: ACTCATGTCCATCGAGGTGCCCCGGCTGATGACCCAGGACTGTCTGGAGCACGCCAAGCACAGCTCTAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CAA 72 bp | TCCAGAGAGCCGGGCCAAAGCTCCTCCAGGAGTGAGTaGGCACGCCTTTGCCTGTGTAGGACACCATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SREPGQSSSRSE*ARLCLCRTPCA Trigger: AGCACATGGTGTCCTACACAGGCAAAGGCGTGCCAACTCACTCCTGGAGGAGCTTTGGCCCGGCTCTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CAA 90 bp | CTCTTGAAGATCTCCCGGGCCTCCTCAAAGGAGCACTGTTCCTCATaGCACTCTCTCTCCAGAGAGCCGGGCCAAAGCTCCTCCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLKISRASSKEHCSS*HSLSREPGQSSSRS Trigger: ACTCCTGGAGGAGCTTTGGCCCGGCTCTCTGGAGAGAGAGTGCAATGAGGAACAGTGCTCCTTTGAGGAGGCCCGGGAGATCTTCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CAA 90 bp | AGGCGGAGCAGGGCAATGTCGTGGTTGATCTTGCCGCGGATGTACTaGTCGGGCATGATGACCTGTGTCACCCGTCGTACTTGCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: RRSRAMSWLILPRMY*SGMMTCVTRRTCSS Trigger: GGATGAGCAAGTACGACGGGTGACACAGGTCATCATGCCCGACAAGTACATCCGCGGCAAGATCAACCACGACATTGCCCTGCTCCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 72 bp | GGCCAAAGCTCCTCCAGGAGTGAGTTGGCACGCCTTTaGCTGTGTAGGACACCATGTGCTTCCTCCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GQSSSRSELARL*LCRTPCASSWV Trigger: AACCCAGGAGGAAGCACATGGTGTCCTACACAGGCAAAGGCGTGCCAACTCACTCCTGGAGGAGCTTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 72 bp | GCCTGTGTAGGACACCATGTGCTTCCTCCTGGGTTATaGAAACTGCAGTCCCTAGAGGTCCCTGGAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ACVGHHVLPPGL*KLQSLEVPGAG Trigger: TCCAGCTCCAGGGACCTCTAGGGACTGCAGTTTTCATAACCCAGGAGGAAGCACATGGTGTCCTACACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 72 bp | GGAAAACCCCAACCTGGAGCTTGGAGTCCATGTGTCTaGCCAGCCAGTCTATGTACTGGGAGACCCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GKPQPGAWSPCV*PASLCTGRPWC Trigger: ACACCAGGGTCTCCCAGTACATAGACTGGCTGGTCAGACACATGGACTCCAAGCTCCAGGTTGGGGTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 72 bp | CGCCTTTGCCTGTGTAGGACACCATGTGCTTCCTCCTaGGTTATGAAAACTGCAGTCCCTAGAGGTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RLCLCRTPCASS*VMKTAVPRGPW Trigger: CCAGGGACCTCTAGGGACTGCAGTTTTCATAACCCAGGAGGAAGCACATGGTGTCCTACACAGGCAAAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CAA 72 bp | AGGGCAATGTCGTGGTTGATCTTGCCGCGGATGTACTaGTCGGGCATGATGACCTGTGTCACCCGTCGTACT | + |
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Preference number: 6 (lower is better) Translates to: RAMSWLILPRMY*SGMMTCVTRRT Trigger: AGTACGACGGGTGACACAGGTCATCATGCCCGACAAGTACATCCGCGGCAAGATCAACCACGACATTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CAA 72 bp | ATGTTCTCTGTGATTTTGGGGGTGTTAGAGCTGTGCTaGGCGTGCTCCAGACAGTCCTGGGTCATCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: MFSVILGVLELC*ACSRQSWVISR Trigger: CCGGCTGATGACCCAGGACTGTCTGGAGCACGCCAAGCACAGCTCTAACACCCCCAAAATCACAGAGAACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 72 bp | GTAGCGTGTAGTCCTCATGACAGCTACAGGTACGCTTaGTCCCTACATGGTCCCTGCAGTACTGGTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: VACSPHDSYRYA*SLHGPCSTGHS Trigger: ACTGTGACCAGTACTGCAGGGACCATGTAGGGACCAAGCGTACCTGTAGCTGTCATGAGGACTACACGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CCA 72 bp | CTTGAGATGATCCTGGCAGGTACCTCCGTTCTGACATaGATTCGAGGCACACTGGTCCCCATCACTGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: LEMILAGTSVLT*IRGTLVPITVN Trigger: GTTTACAGTGATGGGGACCAGTGTGCCTCGAATCCATGTCAGAACGGAGGTACCTGCCAGGATCATCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CAA 72 bp | TACAGTAGTGGGAGTCGGAAAACCCCAACCTGGAGCTaGGAGTCCATGTGTCTGACCAGCCAGTCTATGTAC | + |
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Preference number: 6 (lower is better) Translates to: YSSGSRKTPTWS*ESMCLTSQSMY Trigger: GTACATAGACTGGCTGGTCAGACACATGGACTCCAAGCTCCAGGTTGGGGTTTTCCGACTCCCACTACTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS TCA 72 bp | CCTCAAAGTCTAGGAGGCAGAAGCAGACGTAAGACTTaGGATGATCCTGGCAGGTACCTCCGTTCTGACATG | + |
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Preference number: 6 (lower is better) Translates to: PQSLGGRSRRKT*DDPGRYLRSDM Trigger: CATGTCAGAACGGAGGTACCTGCCAGGATCATCTCAAGTCTTACGTCTGCTTCTGCCTCCTAGACTTTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 72 bp | CAGGTATTCTCCCACACGGGTACTCAACTTTTGGTTTaGAGGACACCTCATCTGGCTGTAGCGTGTAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: QVFSHTGTQLLV*RTPHLAVACSP Trigger: AGGACTACACGCTACAGCCAGATGAGGTGTCCTGCAAACCAAAAGTTGAGTACCCGTGTGGGAGAATACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 72 bp | TTGTCGGGCATGATGACCTGTGTCACCCGTCGTACTTaGTCATCCCCATCCTTCTCACTGAAGTCATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSGMMTCVTRRT*SSPSFSLKSCS Trigger: TGAACATGACTTCAGTGAGAAGGATGGGGATGAGCAAGTACGACGGGTGACACAGGTCATCATGCCCGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS CAA 72 bp | CTACAACAGGTATTCTCCCACACGGGTACTCAACTTTaGGTTTGCAGGACACCTCATCTGGCTGTAGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: LQQVFSHTGTQL*VCRTPHLAVAC Trigger: ACACGCTACAGCCAGATGAGGTGTCCTGCAAACCAAAAGTTGAGTACCCGTGTGGGAGAATACCTGTTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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| CDS GCA 72 bp | TGGTCACAGTCACCATTTTCATTTGCACAGATCAGCTaGTCATTCTTGCTTTTCTCACAGTTCCGACCCTCA | + |
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Preference number: 6 (lower is better) Translates to: WSQSPFSFAQIS*SFLLFSQFRPS Trigger: TGAGGGTCGGAACTGTGAGAAAAGCAAGAATGAGCAGCTGATCTGTGCAAATGAAAATGGTGACTGTGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033820.4 |
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