Pregenerated sensors for F3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028128Ensembl transcript IDs: ENSMUST00000029771.13, ENSMUST00000199997.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACCGCTTTATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTACCAGTTCGTCCTAACGTaGCAAATGCTAGTGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YRFIKVRLLEKSAQFPLYQFVLT*QMLVLE Trigger: TTCCAACACTAGCATTTGTCACGTTAGGACGAACTG...GTAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTATAAAGCGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTAACATGTTTCCCACCCAGGTTATATaGAAGGCATCTGTCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: KYKSQRCPKQKYPAFNMFPTQVI*KASVHW Trigger: CCAGTGGACAGATGCCTTTCATATAACCTGGGTGGG...AAACATGTTAAATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTATATGAAAGTTTGCCACTTGCTTTGAACTTCCAAAAGTACCTATTCGAGCAGTTCGTCCTAACGTaGCAAATGCTAGTGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: CLYESLPLALNFQKYLFEQFVLT*QMLVLE Trigger: TTCCAACACTAGCATTTGTCACGTTAGGACGAACTG...CTCGAATAGGTACTTTTGGAAGTTCAAAGCAAGTGGCAAACTTTCATATAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| 3UTR CAA 90 bp | GCCCCAAGCAGAAATATCCTGCATTTAACATGTTTATATGAAAGTTaGCCACTTGCTTTGAACTTCCAAAAGTACCTATTCGAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: APSRNILHLTCLYES*PLALNFQKYLFEGK Trigger: TTTTCCCTCGAATAGGTACTTTTGGAAGTTCAAAGCAAGTGGCAAACTTTCATATAAACATGTTAAATGCAGGATATTTCTGCTTGGGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTAACATGTTTGCTCCACGCTCCATGTaGCACAGTTCCCATCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: KYKSQRCPKQKYPAFNMFAPRSM*HSSHQS Trigger: GCTCTGATGGGAACTGTGCAACATGGAGCGTGGAGC...AAACATGTTAAATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| 3UTR-3UTR CAA 90 bp | AAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTAACATGTTTAGTTTGCCACTTGCTTaGAACTTCCAAAAGTACCTA | + |
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Preference number: 3 (lower is better) Translates to: KYKSQRCPKQKYPAFNMFSLPLA*NFQKYL Trigger: TAGGTACTTTTGGAAGTTCAAAGCAAGTGGCAAACT...AAACATGTTAAATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGTGTAGACCATACAATCTAAAGCATTTGTGCAAAAGGCGCTGTAGTGTTGCACCCGCGGTCACCTaGAGGAGGAGGCAGCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: PECRPYNLKHLCKRRCSVAPAVT*RRRQPR Trigger: TCTCGGCTGCCTCCTCCTCCAGGTGACCGCGGGTGC...AACACTACAGCGCCTTTTGCACAAATGCTTTAGATTGTATGGTCTACACTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR GCA 90 bp | ATACCGCTTTATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTAGGCCAGGAGCACCACTaGTCCCACAATGATGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: IPLYKSTTVRKVRPVPTLGQEHH*SHNDEC Trigger: ACACTCATCATTGTGGGAGCAGTGGTGCTCCTGGCC...TAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTATAAAGCGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR GCA 90 bp | ATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTACTGTTCTACATATAACCCAAGTCCTTaGCAAAGACTTGCCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IKVRLLEKSAQFPLYCSTYNPSP*QRLAAG Trigger: CCCTGCGGCAAGTCTTTGGCAAGGACTTGGGTTATA...TGTAGAACAGTAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR GCA 90 bp | GTAGGAAAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTAACCCGCTCGGTTCTTTCTaGGCTTGCACAGAGATATGG | + |
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Preference number: 4 (lower is better) Translates to: VGKYKSQRCPKQKYPAFNPLGSF*ACTEIW Trigger: CCATATCTCTGTGCAAGCGCAGAAAGAACCGAGCGG...GTTAAATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTTTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR GCA 90 bp | AATTGTAGGAAAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTATAACCCAAGTCCTTaGCAAAGACTTGCCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NCRKVQITKMPQAEISCIYNPSP*QRLAAG Trigger: CCCTGCGGCAAGTCTTTGGCAAGGACTTGGGTTATA...AATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTTTCCTACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGTGTAGACCATACAATCTAAAGCATTTGTGCAAAAGGCGCTGTAGTGTTTTGTTTTCTTTCCCGTaGTTGAGCCTTTCCGATAAG | + |
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Preference number: 4 (lower is better) Translates to: PECRPYNLKHLCKRRCSVLFSFP*LSLSDK Trigger: CTTATCGGAAAGGCTCAAGCACGGGAAAGAAAACAA...AACACTACAGCGCCTTTTGCACAAATGCTTTAGATTGTATGGTCTACACTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CCA 90 bp | TGTTTATATGAAAGTTTGCCACTTGCTTTGAACTTCCAAAAGTACCTATTCGAGTGGGGCGTTTGTAAATaGCGGCTCCTCCCCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: CLYESLPLALNFQKYLFEWGVCK*RLLPMN Trigger: ATTCATGGGGAGGAGCCGCCATTTACAAACGCCCCA...CTCGAATAGGTACTTTTGGAAGTTCAAAGCAAGTGGCAAACTTTCATATAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR GCA 90 bp | AAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTAACATGTTTCGGTGCACACTGTACTaGTTCCTGGGCTATTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: KYKSQRCPKQKYPAFNMFRCTLY*FLGYFG Trigger: ACCAAAATAGCCCAGGAAGCAGTACAGTGTGCACCG...AAACATGTTAAATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CCA 90 bp | ATACCGCTTTATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTATATAGTTGGTGGGTTTaGGTTGCCACTCCAAAATTG | + |
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Preference number: 4 (lower is better) Translates to: IPLYKSTTVRKVRPVPTLYSWWV*VATPKL Trigger: CAATTTTGGAGTGGCAACCCAAACCCACCAACTATA...TAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTATAAAGCGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CCA 90 bp | CCTGAGTGTAGACCATACAATCTAAAGCATTTGTGCAAAAGGCGCTGTAGTGTTCACTGTACTGCTTCCTaGGCTATTTTGGTTAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PECRPYNLKHLCKRRCSVHCTAS*AILVSF Trigger: AAAACTAACCAAAATAGCCCAGGAAGCAGTACAGTG...AACACTACAGCGCCTTTTGCACAAATGCTTTAGATTGTATGGTCTACACTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CCA 90 bp | TGTTTATATGAAAGTTTGCCACTTGCTTTGAACTTCCAAAAGTACCTATTCGAGCAGTGTAGGTATAGTTaGTGGGTTTGGGTTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: CLYESLPLALNFQKYLFEQCRYS*WVWVAT Trigger: AGTGGCAACCCAAACCCACCAACTATACCTACACTG...CTCGAATAGGTACTTTTGGAAGTTCAAAGCAAGTGGCAAACTTTCATATAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CCA 90 bp | ATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTACTGTTCTACACTTCCTGGGCTATTTTaGTTAGTTTTCCTGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: IKVRLLEKSAQFPLYCSTLPGLF*LVFLEK Trigger: TTTCTCCAGGAAAACTAACCAAAATAGCCCAGGAAG...TGTAGAACAGTAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS CCA 90 bp | TGCCTGCACCCGCGGTCACCTGGAGGAGGAGGCAGCCGAGAAACGTaGGCGCGAGAGCCGCTAGGAGGCGCGGGCGCACGAGGATCGCCA | + |
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Preference number: 5 (lower is better) Translates to: CLHPRSPGGGGSRET*AREPLGGAGARGSP Trigger: TGGCGATCCTCGTGCGCCCGCGCCTCCTAGCGGCTCTCGCGCCCACGTTTCTCGGCTGCCTCCTCCTCCAGGTGACCGCGGGTGCAGGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS TCA 90 bp | CCTTTGCTTCATAGGCCCAGGTCACATCCTTCACGATCTCGTCTGTaGGGTCGCACTCGGTGTCTGTGGTCGAGAAGCACTTGTTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: PLLHRPRSHPSRSRL*GRTRCLWSRSTCFS Trigger: GGAAAAACAAGTGCTTCTCGACCACAGACACCGAGTGCGACCTCACAGACGAGATCGTGAAGGATGTGACCTGGGCCTATGAAGCAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS GCA 90 bp | AGATATGGACAGGAGGATGATAAAGATGGTGGCCAGGAGCACCACTaGTCCCACAATGATGAGTGTTTCTCCCAGGAAACTCTTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: RYGQEDDKDGGQEHH*SHNDECFSQETLPL Trigger: CAATGGAAGAGTTTCCTGGGAGAAACACTCATCATTGTGGGAGCAGTGGTGCTCCTGGCCACCATCTTTATCATCCTCCTGTCCATATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CAA 90 bp | TACCGCTTTATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTACGCTCCACGCTCCATGTaGCACAGTTCCCATCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: YRFIKVRLLEKSAQFPLYAPRSM*HSSHQS Trigger: GCTCTGATGGGAACTGTGCAACATGGAGCGTGGAGC...GTAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTATAAAGCGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199997.2 |
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| CDS GCA 90 bp | ACTGCTCCCACAATGATGAGTGTTTCTCCCAGGAAACTCTTCCATTaGTCGGTGCACACTGTACTGCTTCCTGGGCTATTTTGGTTAGTT | + |
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Preference number: 5 (lower is better) Translates to: TAPTMMSVSPRKLFH*SVHTVLLPGLFWLV Trigger: AACTAACCAAAATAGCCCAGGAAGCAGTACAGTGTGCACCGAGCAATGGAAGAGTTTCCTGGGAGAAACACTCATCATTGTGGGAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CAA 90 bp | GTAGGAAAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTAACGTCCTTGCCAAAGACTaGCCGCAGGGTGAGGAATGT | + |
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Preference number: 5 (lower is better) Translates to: VGKYKSQRCPKQKYPAFNVLAKD*PQGEEC Trigger: ACATTCCTCACCCTGCGGCAAGTCTTTGGCAAGGAC...GTTAAATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTTTCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR CAA 90 bp | ATACCGCTTTATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTACGGTTCTTTCTGCGCTaGCACAGAGATATGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: IPLYKSTTVRKVRPVPTLRFFLR*HRDMDR Trigger: CCTGTCCATATCTCTGTGCAAGCGCAGAAAGAACCG...TAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTATAAAGCGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR CAA 90 bp | GTAGGAAAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTTAACCGGTTCTTTCTGCGCTaGCACAGAGATATGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: VGKYKSQRCPKQKYPAFNRFFLR*HRDMDR Trigger: CCTGTCCATATCTCTGTGCAAGCGCAGAAAGAACCG...GTTAAATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTTTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR CAA 90 bp | ATAAAAGTACGACTGTTAGAAAAGTCCGCCCAGTTCCCACTTTACTGTTCTACAGTTGGTGGGTTTGGGTaGCCACTCCAAAATTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: IKVRLLEKSAQFPLYCSTVGGFG*PLQNCL Trigger: AAGACAATTTTGGAGTGGCAACCCAAACCCACCAAC...TGTAGAACAGTAAAGTGGGAACTGGGCGGACTTTTCTAACAGTCGTACTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CAA 90 bp | TGTTTATATGAAAGTTTGCCACTTGCTTTGAACTTCCAAAAGTACCTATTCGAGGGACAGAGAGGACCTTaGCTTCATAGGCCCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: CLYESLPLALNFQKYLFEGQRGP*LHRPRS Trigger: TGACCTGGGCCTATGAAGCAAAGGTCCTCTCTGTCC...CTCGAATAGGTACTTTTGGAAGTTCAAAGCAAGTGGCAAACTTTCATATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS-3UTR CAA 90 bp | TGTTTATATGAAAGTTTGCCACTTGCTTTGAACTTCCAAAAGTACCTATTCGAGGTCCTTGCCAAAGACTaGCCGCAGGGTGAGGAATGT | + |
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Preference number: 5 (lower is better) Translates to: CLYESLPLALNFQKYLFEVLAKD*PQGEEC Trigger: ACATTCCTCACCCTGCGGCAAGTCTTTGGCAAGGAC...CTCGAATAGGTACTTTTGGAAGTTCAAAGCAAGTGGCAAACTTTCATATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029771.13 ENSMUST00000199997.2 |
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| CDS-3UTR CAA 90 bp | AATTGTAGGAAAGTACAAATCACAAAGATGCCCCAAGCAGAAATATCCTGCATTGTGGTCGAGAAGCACTaGTTTTTCCAGTTTCTAGAT | + |
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Preference number: 5 (lower is better) Translates to: NCRKVQITKMPQAEISCIVVEKH*FFQFLD Trigger: ATCTAGAAACTGGAAAAACAAGTGCTTCTCGACCAC...AATGCAGGATATTTCTGCTTGGGGCATCTTTGTGATTTGTACTTTCCTACAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS TCA 72 bp | CATAGGCCCAGGTCACATCCTTCACGATCTCGTCTGTaGGGTCGCACTCGGTGTCTGTGGTCGAGAAGCACT | + |
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Preference number: 6 (lower is better) Translates to: HRPRSHPSRSRL*GRTRCLWSRST Trigger: AGTGCTTCTCGACCACAGACACCGAGTGCGACCTCACAGACGAGATCGTGAAGGATGTGACCTGGGCCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS TCA 72 bp | ATCAGAGCTCTCCGCAACAGTGCCGTGCAGGCAGTGTaGGCGTTAGCGGCTTCAGCCTTTCCTCTATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: IRALRNSAVQAV*ALAASAFPLCQ Trigger: TTGGCATAGAGGAAAGGCTGAAGCCGCTAACGCTCACACTGCCTGCACGGCACTGTTGCGGAGAGCTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199997.2 |
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| CDS CAA 90 bp | CACTGCTCCCACAATGATGAGTGTTTCTCCCAGGAAACTCTTCCATaGCTCGGTGCACACTGTACTGCTTCCTGGGCTATTTTGGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: HCSHNDECFSQETLP*LGAHCTASWAILVS Trigger: ACTAACCAAAATAGCCCAGGAAGCAGTACAGTGTGCACCGAGCAATGGAAGAGTTTCCTGGGAGAAACACTCATCATTGTGGGAGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS CAA 72 bp | CACAATGATGAGTGTTTCTCCCAGGAAACTCTTCCATaGCTCGGTGCACACTGTACTGCTTCCTGGGCTATT | + |
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Preference number: 6 (lower is better) Translates to: HNDECFSQETLP*LGAHCTASWAI Trigger: AATAGCCCAGGAAGCAGTACAGTGTGCACCGAGCAATGGAAGAGTTTCCTGGGAGAAACACTCATCATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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| CDS GCA 72 bp | ACAATGATGAGTGTTTCTCCCAGGAAACTCTTCCATTaGTCGGTGCACACTGTACTGCTTCCTGGGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: TMMSVSPRKLFH*SVHTVLLPGLF Trigger: AAATAGCCCAGGAAGCAGTACAGTGTGCACCGAGCAATGGAAGAGTTTCCTGGGAGAAACACTCATCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029771.13 |
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