Pregenerated sensors for F2RL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050147Ensembl transcript IDs: ENSMUST00000058099.9
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCTCCACCTCCCTACCAGTCAAGCCAGAATaGCCCCTTCCCACCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: FTTVKDNPELLILFSTSLPVKPE*PLPTSA Trigger: AGCTGAGGTGGGAAGGGGGCATTCTGGCTTGACTGG...TAGGGAGGTGGAGAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| 3UTR CAA 90 bp | AAATTTAATGGTAGAGAAGGAATTGAGGTAGACACCCATCATCCTTaGGCCTCTCTGTGTACCCGCAGGCACATACAATATATGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: KFNGREGIEVDTHHP*ASLCTRRHIQYMCA Trigger: TGCACACATATATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACCTCAATTCCTTCTCTACCATTAAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| 3UTR-3UTR GCA 90 bp | AATGGTAGAGAAGGAATTGAGGTAGACACCCATCATCCTTTGGCCTCTCTGTGTCATACAATATATGTGTaGAGACACATCTACACTGTG | + |
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Preference number: 2 (lower is better) Translates to: NGREGIEVDTHHPLASLCHTIYV*RHIYTV Trigger: CACAGTGTAGATGTGTCTGCACACATATATTGTATG...ACACAGAGAGGCCAAAGGATGATGGGTGTCTACCTCAATTCCTTCTCTACCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| 3UTR TCA 72 bp | CTCCTGATCCTCTTCTCCACCTCCCTAGTGCTGGAGTaGCAGACGTATAGTACCCAGACCTTTTACAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LLILFSTSLVLE*QTYSTQTFYKS Trigger: GCTTTTGTAAAAGGTCTGGGTACTATACGTCTGTCACTCCAGCACTAGGGAGGTGGAGAAGAGGATCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| 3UTR-3UTR CAA 90 bp | GGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATAGTTCTAAGAGGCACCTaGACAAAATCAGGGTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: GRHPSSFGLSVYPQAHTIVLRGT*TKSGCL Trigger: TAGACACCCTGATTTTGTCAAGGTGCCTCTTAGAAC...TATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCCAGAATGCCCCAGGCCTGAGAGGAGCTaGTGGCCTCCGGCTGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: RVQEGCSLRGDPVKPECPRPERS*WPPAGD Trigger: GTCGCCAGCCGGAGGCCAGCAGCTCCTCTCAGGCCT...GGGGCATTCTGGCTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR TCA 90 bp | GGTCATGTCCTGAGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCCCAGCAGCAGTGCTTaGGAGCTGGCCGGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GHVLRVQEGCSLRGDPVKPSSSA*ELAGSS Trigger: GGAGCTCCCGGCCAGCTCTCAAGCACTGCTGCTGGG...CTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCTCAGGACATGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | AGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCCAGAATGCCCCGCCCATGGCCAGCAGTaGCACGAAGCAGCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RVQEGCSLRGDPVKPECPAHGQQ*HEAAQD Trigger: GTCCTGGGCTGCTTCGTGCCACTGCTGGCCATGGGC...GGGGCATTCTGGCTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCCAGAATGCCCCGGTCTGGATGCCCTCTaGCAGGCTGATGCTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RVQEGCSLRGDPVKPECPGLDAL*QADAEP Trigger: GGGCTCAGCATCAGCCTGGCAGAGGGCATCCAGACC...GGGGCATTCTGGCTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCCAGAATGCCCCCGGGCCCGCAAAGGATaGACCAGGGCCAGGTATCTG | + |
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Preference number: 4 (lower is better) Translates to: RVQEGCSLRGDPVKPECPRARKG*TRARYL Trigger: CAGATACCTGGCCCTGGTGCATCCTTTGCGGGCCCG...GGGGCATTCTGGCTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | AGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCCAGAATGCCCCGCAGTGCTTGAGAGCTaGCCGGGAGCTCCAGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RVQEGCSLRGDPVKPECPAVLES*PGAPAC Trigger: ACACGCTGGAGCTCCCGGCCAGCTCTCAAGCACTGC...GGGGCATTCTGGCTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | GGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATAGGCTTCCAGCCTCCCTaGAGGCCTGAGAGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRHPSSFGLSVYPQAHTIGFQPP*RPERSC Trigger: GCAGCTCCTCTCAGGCCTCCAGGGAGGCTGGAAGCC...TATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | GGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATATGTAGCGCTGGCCATTaGCCGCCAGTGCACGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRHPSSFGLSVYPQAHTICSAGH*PPVHEG Trigger: CCCTTCGTGCACTGGCGGCCAATGGCCAGCGCTACA...TATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | AATGGTAGAGAAGGAATTGAGGTAGACACCCATCATCCTTTGGCCTCTCTGTGTGGCGTGGCACCCTTGTaGCCAGCACCCACAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: NGREGIEVDTHHPLASLCGVAPL*PAPTAP Trigger: TGGCGCTGTGGGTGCTGGCCACAAGGGTGCCACGCC...ACACAGAGAGGCCAAAGGATGATGGGTGTCTACCTCAATTCCTTCTCTACCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR TCA 90 bp | GTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATATAGGGGCAGCGCATCATaGCACAGCATGCGATCGGAG | + |
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Preference number: 4 (lower is better) Translates to: VDTHHPLASLCTRRHIQYRGSAS*HSMRSE Trigger: CTCCGATCGCATGCTGTGTCATGATGCGCTGCCCCT...ATATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | AATGGTAGAGAAGGAATTGAGGTAGACACCCATCATCCTTTGGCCTCTCTGTGTCAGGTACCAGCCTCGTaGGGACCCACCCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NGREGIEVDTHHPLASLCQVPAS*GPTPAA Trigger: TGCTGCTGGGGTGGGTCCCCACGAGGCTGGTACCTG...ACACAGAGAGGCCAAAGGATGATGGGTGTCTACCTCAATTCCTTCTCTACCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR TCA 90 bp | GGTCATGTCCTGAGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCCACTGCCAGGTTCATaGGCAGAATGGTGGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: GHVLRVQEGCSLRGDPVKPLPGS*AEWWMA Trigger: TGCCATCCACCATTCTGCTCATGAACCTGGCAGTGG...CTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCTCAGGACATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR TCA 90 bp | GGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATAGGTATCTGTCCAAGCTaGCTGCAGCCAGCAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: GRHPSSFGLSVYPQAHTIGICPS*LQPAAT Trigger: TGTTGCTGCTGGCTGCAGTCAGCTTGGACAGATACC...TATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | TATGTGTGCAGACACATCTACACTGTGCAGACACATGCTAAGCACAAAGGTTTGCCACCCCAGCAGCAGTaGTTGAGAGCTGGCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: YVCRHIYTVQTHAKHKGLPPQQQ*LRAGRE Trigger: CTCCCGGCCAGCTCTCAAGCACTGCTGCTGGGGTGG...CAAACCTTTGTGCTTAGCATGTGTCTGCACAGTGTAGATGTGTCTGCACACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | AATGGTAGAGAAGGAATTGAGGTAGACACCCATCATCCTTTGGCCTCTCTGTGTCAAGGCCAGGGTGGCTaGAGAGAGCCAGGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: NGREGIEVDTHHPLASLCQGQGG*REPGHQ Trigger: TTGGTGGCCTGGCTCTCTGCAGCCACCCTGGCCTTG...ACACAGAGAGGCCAAAGGATGATGGGTGTCTACCTCAATTCCTTCTCTACCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | GTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATATCCCAGAGGGCCTTCATaGCTTCCCCTGGTACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VDTHHPLASLCTRRHIQYPRGPS*LPLVLS Trigger: AGAGAGTACCAGGGGAAGCCATGAAGGCCCTCTGGG...ATATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | GGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATAGCGTGTCACTGTCGTTaGCACAGAATTTGCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GRHPSSFGLSVYPQAHTIACHCR*HRICPG Trigger: ACCCGGGCAAATTCTGTGCCAACGACAGTGACACGC...TATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | TATGTGTGCAGACACATCTACACTGTGCAGACACATGCTAAGCACAAAGGTTTGACAGCGCCAGCCCATTaGCAGGCAGCCCCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: YVCRHIYTVQTHAKHKGLTAPAH*QAAPQP Trigger: TGGCTGTGGGGCTGCCTGCCAATGGGCTGGCGCTGT...CAAACCTTTGTGCTTAGCATGTGTCTGCACAGTGTAGATGTGTCTGCACACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | TTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCTCCACCTCCCTACGGAAGGTCTGCCGATaGAGAGTGAGAGGCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: FTTVKDNPELLILFSTSLRKVCR*RVRGKA Trigger: GGCCTTGCCTCTCACTCTGCATCGGCAGACCTTCCG...TAGGGAGGTGGAGAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | GGTCATGTCCTGAGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCATCATGACACAGCATaGGATCGGAGCCAGCTAATC | + |
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Preference number: 4 (lower is better) Translates to: GHVLRVQEGCSLRGDPVKHHDTA*DRSQLI Trigger: GATTAGCTGGCTCCGATCGCATGCTGTGTCATGATG...CTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCTCAGGACATGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | TTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCTCCACCTCCCTAGTGGTAAGCCAGTCGTaGTGGCAGCACCAGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FTTVKDNPELLILFSTSLVVSQS*WQHQGQ Trigger: TTGGCCCTGGTGCTGCCACCACGACTGGCTTACCAC...TAGGGAGGTGGAGAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CCA 90 bp | TCTCACATAGCCCAGCCTAGCTCCAAATTCACTACAGTCAAAGATAATCCTGAAGGCAGCCTCACCAAATaGCCAGCGCTGGCCACGCAA | + |
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Preference number: 4 (lower is better) Translates to: SHIAQPSSKFTTVKDNPEGSLTK*PALATQ Trigger: TTGCGTGGCCAGCGCTGGCCATTTGGTGAGGCTGCC...TTCAGGATTATCTTTGACTGTAGTGAATTTGGAGCTAGGCTGGGCTATGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR TCA 90 bp | TTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCTCCACCTCCCTAAGGACTTCGGCTCCTTaGGTTCTACTGTGGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: FTTVKDNPELLILFSTSLRTSAP*VLLWDP Trigger: TGGGTCCCACAGTAGAACTCAAGGAGCCGAAGTCCT...TAGGGAGGTGGAGAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | TTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCTCCACCTCCCTATGTGAAAGAGGCCACTaGCGAGAACAGTACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FTTVKDNPELLILFSTSLCERGH*REQYQG Trigger: GCCCTGGTACTGTTCTCGGCAGTGGCCTCTTTCACA...TAGGGAGGTGGAGAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR GCA 90 bp | CCTAGCTCCAAATTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCGCTAATCGGAAGGTCTaGCGATGCAGAGTGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSSKFTTVKDNPELLILFANRKV*RCRVRG Trigger: GCCTCTCACTCTGCATCGGCAGACCTTCCGATTAGC...GAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAATTTGGAGCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR TCA 90 bp | TTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCTCCACCTCCCTAAGCCAGCAGCAACACTaGACCATACATGTGGCCATA | + |
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Preference number: 4 (lower is better) Translates to: FTTVKDNPELLILFSTSLSQQQH*TIHVAI Trigger: TATGGCCACATGTATGGTTCAGTGTTGCTGCTGGCT...TAGGGAGGTGGAGAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR TCA 90 bp | AATGGTAGAGAAGGAATTGAGGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACACATAGTAGTAGATaGAAGGGTCTACGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NGREGIEVDTHHPLASLCTHSSR*KGLRSC Trigger: ACAGCTGCGTAGACCCTTTCATCTACTACTATGTGT...ACACAGAGAGGCCAAAGGATGATGGGTGTCTACCTCAATTCCTTCTCTACCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 90 bp | AGGGCAGGTACCAGCCTCGTGGGGACCCACCCCAGCAGCAGTGCTTaGGAGCTGGCCGGGAGCTCCAGCGTGTCACTGTCGTTGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: RAGTSLVGTHPSSSA*ELAGSSSVSLSLAQ Trigger: CTGTGCCAACGACAGTGACACGCTGGAGCTCCCGGCCAGCTCTCAAGCACTGCTGCTGGGGTGGGTCCCCACGAGGCTGGTACCTGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 90 bp | CCATGGCCAGCAGTGGCACGAAGCAGCCCAGGACAGCCAGGCAGATaGAGGCCGGTCTCCAGTGGGAGGTCTGCTCAGTCAGGGGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: PWPAVARSSPGQPGR*RPVSSGRSAQSGAA Trigger: CGCTGCCCCTGACTGAGCAGACCTCCCACTGGAGACCGGCCTTCATCTGCCTGGCTGTCCTGGGCTGCTTCGTGCCACTGCTGGCCATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 90 bp | GAGGAGCAAATGGCAGTCCCTCGGCTTCCAGCCTCCCTGGAGGCCTaGGAGGAGCTGCTGGCCTCCGGCTGGCGACACAACATAGCGCGT | + |
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Preference number: 5 (lower is better) Translates to: EEQMAVPRLPASLEA*EELLASGWRHNIAR Trigger: ACGCGCTATGTTGTGTCGCCAGCCGGAGGCCAGCAGCTCCTCTCAGGCCTCCAGGGAGGCTGGAAGCCGAGGGACTGCCATTTGCTCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CCA 90 bp | GTGCATGGCTGTAGCGCTGGCCATTGGCCGCCAGTGCACGAAGGGTaGCTCCATAGCACAGGCCCATGGCCAGCAGTGGCACGAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VHGCSAGHWPPVHEG*LHSTGPWPAVARSS Trigger: GCTGCTTCGTGCCACTGCTGGCCATGGGCCTGTGCTATGGAGCCACCCTTCGTGCACTGGCGGCCAATGGCCAGCGCTACAGCCATGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 90 bp | GCTGCAGAGAGCCAGGCCACCAAACAGAGTCCAGTAGTGAGGCGTTaGCCACGCAGTGCACGGGCCCGCAAAGGATGCACCAGGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AAESQATKQSPVVRR*PRSARARKGCTRAR Trigger: CCTGGCCCTGGTGCATCCTTTGCGGGCCCGTGCACTGCGTGGTCAACGCCTCACTACTGGACTCTGTTTGGTGGCCTGGCTCTCTGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 90 bp | TGTCAGTCTGAGTGCATGGCTGTAGCGCTGGCCATTGGCCGCCAGTaGACGAAGGGTGGCTCCATAGCACAGGCCCATGGCCAGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: CQSECMAVALAIGRQ*TKGGSIAQAHGQQW Trigger: CCACTGCTGGCCATGGGCCTGTGCTATGGAGCCACCCTTCGTGCACTGGCGGCCAATGGCCAGCGCTACAGCCATGCACTCAGACTGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CCA 90 bp | CCAGCAGCAACACTGAACCATACATGTGGCCATAGAGGGCAGCTGTaGCCACCCGGCAGGCAGCCTCACCAAATGGCCAGCGCTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: PAATLNHTCGHRGQL*PPGRQPHQMASAGH Trigger: GTGGCCAGCGCTGGCCATTTGGTGAGGCTGCCTGCCGGGTGGCCACAGCTGCCCTCTATGGCCACATGTATGGTTCAGTGTTGCTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 90 bp | GCCGGTCTCCAGTGGGAGGTCTGCTCAGTCAGGGGCAGCGCATCATaGCACAGCATGCGATCGGAGCCAGCTAATCGGAAGGTCTGCCGA | + |
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Preference number: 5 (lower is better) Translates to: AGLQWEVCSVRGSAS*HSMRSEPANRKVCR Trigger: TCGGCAGACCTTCCGATTAGCTGGCTCCGATCGCATGCTGTGTCATGATGCGCTGCCCCTGACTGAGCAGACCTCCCACTGGAGACCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 90 bp | AGCCAGTCGTGGTGGCAGCACCAGGGCCAACAGCAGATCAGCCACTaGCAGGTTCATGAGCAGAATGGTGGATGGCAGGCGTGGCACCCT | + |
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Preference number: 5 (lower is better) Translates to: SQSWWQHQGQQQISH*QVHEQNGGWQAWHP Trigger: AGGGTGCCACGCCTGCCATCCACCATTCTGCTCATGAACCTGGCAGTGGCTGATCTGCTGTTGGCCCTGGTGCTGCCACCACGACTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 90 bp | CCAGGCCACCAAACAGAGTCCAGTAGTGAGGCGTTGACCACGCAGTaGACGGGCCCGCAAAGGATGCACCAGGGCCAGGTATCTGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: PGHQTESSSEALTTQ*TGPQRMHQGQVSVQ Trigger: TTGGACAGATACCTGGCCCTGGTGCATCCTTTGCGGGCCCGTGCACTGCGTGGTCAACGCCTCACTACTGGACTCTGTTTGGTGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 90 bp | CAGGGCCAGGTATCTGTCCAAGCTGACTGCAGCCAGCAGCAACACTaGACCATACATGTGGCCATAGAGGGCAGCTGTGGCCACCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: QGQVSVQADCSQQQH*TIHVAIEGSCGHPA Trigger: TGCCGGGTGGCCACAGCTGCCCTCTATGGCCACATGTATGGTTCAGTGTTGCTGCTGGCTGCAGTCAGCTTGGACAGATACCTGGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CAA 90 bp | GGTCATGTCCTGAGGGTTCAAGAGGGATGTAGTTTAAGGGGAGACCCAGTCAAGCACAGCGCCAGCCCATaGGCAGGCAGCCCCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: GHVLRVQEGCSLRGDPVKHSASP*AGSPTA Trigger: GGCTGTGGGGCTGCCTGCCAATGGGCTGGCGCTGTG...CTTGACTGGGTCTCCCCTTAAACTACATCCCTCTTGAACCCTCAGGACATGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 90 bp | GGTACTCTCTACATCATCGTAGATGCTGGGGGTCTGGATGCCCTCTaGCAGGCTGATGCTGAGCCCCAGCACCAAAGGATACAGCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: GTLYIIVDAGGLDAL*QADAEPQHQRIQQR Trigger: CCGCTGCTGTATCCTTTGGTGCTGGGGCTCAGCATCAGCCTGGCAGAGGGCATCCAGACCCCCAGCATCTACGATGATGTAGAGAGTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 90 bp | CACATAGGCTCCATAGAGATTGCCCCAGGCCTCAGGGCTCGGGTTTaGATAGTGCAGCACCAGCAGCACATTGCTAGGTGTGAAAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: HIGSIEIAPGLRARV*IVQHQQHIARCERG Trigger: GCCTCTTTCACACCTAGCAATGTGCTGCTGGTGCTGCACTATTCAAACCCGAGCCCTGAGGCCTGGGGCAATCTCTATGGAGCCTATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 90 bp | ATAGTGCAGCACCAGCAGCACATTGCTAGGTGTGAAAGAGGCCACTaGCGAGAACAGTACCAGGGCTGTCAGTCTGAGTGCATGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: IVQHQQHIARCERGH*REQYQGCQSECMAV Trigger: TACAGCCATGCACTCAGACTGACAGCCCTGGTACTGTTCTCGGCAGTGGCCTCTTTCACACCTAGCAATGTGCTGCTGGTGCTGCACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CAA 90 bp | GGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATAGAGGACTTCGGCTCCTaGAGTTCTACTGTGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: GRHPSSFGLSVYPQAHTIEDFGS*SSTVGP Trigger: GGGTCCCACAGTAGAACTCAAGGAGCCGAAGTCCTC...TATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CAA 90 bp | GGTAGACACCCATCATCCTTTGGCCTCTCTGTGTACCCGCAGGCACATACAATAAGCGTGTCACTGTCGTaGGCACAGAATTTGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: GRHPSSFGLSVYPQAHTISVSLS*AQNLPG Trigger: CCCGGGCAAATTCTGTGCCAACGACAGTGACACGCT...TATTGTATGTGCCTGCGGGTACACAGAGAGGCCAAAGGATGATGGGTGTCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CAA 90 bp | CCTAGCTCCAAATTCACTACAGTCAAAGATAATCCTGAACTCCTGATCCTCTTCGCAGGCGTGGCACCCTaGTGGCCAGCACCCACAGCG | + |
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Preference number: 5 (lower is better) Translates to: PSSKFTTVKDNPELLILFAGVAP*WPAPTA Trigger: CGCTGTGGGTGCTGGCCACAAGGGTGCCACGCCTGC...GAAGAGGATCAGGAGTTCAGGATTATCTTTGACTGTAGTGAATTTGGAGCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CAA 90 bp | TCTCACATAGCCCAGCCTAGCTCCAAATTCACTACAGTCAAAGATAATCCTGAACCCCAGCAGCAGTGCTaGAGAGCTGGCCGGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SHIAQPSSKFTTVKDNPEPQQQC*RAGREL Trigger: GAGCTCCCGGCCAGCTCTCAAGCACTGCTGCTGGGG...TTCAGGATTATCTTTGACTGTAGTGAATTTGGAGCTAGGCTGGGCTATGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS-3UTR CAA 90 bp | TATGTGTGCAGACACATCTACACTGTGCAGACACATGCTAAGCACAAAGGTTTGGGGTCTACGCAGCTGTaGAGGGTGCTGAGTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: YVCRHIYTVQTHAKHKGLGSTQL*RVLSAR Trigger: CCTGGCACTCAGCACCCTCAACAGCTGCGTAGACCC...CAAACCTTTGTGCTTAGCATGTGTCTGCACAGTGTAGATGTGTCTGCACACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CCA 72 bp | GGCAGCTGTGGCCACCCGGCAGGCAGCCTCACCAAATaGCCAGCGCTGGCCACGCAAGTGGTAAGCCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: GSCGHPAGSLTK*PALATQVVSQS Trigger: CGACTGGCTTACCACTTGCGTGGCCAGCGCTGGCCATTTGGTGAGGCTGCCTGCCGGGTGGCCACAGCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CCA 72 bp | AGGAGCAAATGGCAGTCCCTCGGCTTCCAGCCTCCCTaGAGGCCTGAGAGGAGCTGCTGGCCTCCGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RSKWQSLGFQPP*RPERSCWPPAG Trigger: GCCAGCCGGAGGCCAGCAGCTCCTCTCAGGCCTCCAGGGAGGCTGGAAGCCGAGGGACTGCCATTTGCTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CAA 90 bp | GAGGGCAGGTACCAGCCTCGTGGGGACCCACCCCAGCAGCAGTGCTaGAGAGCTGGCCGGGAGCTCCAGCGTGTCACTGTCGTTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: EGRYQPRGDPPQQQC*RAGRELQRVTVVGT Trigger: TGTGCCAACGACAGTGACACGCTGGAGCTCCCGGCCAGCTCTCAAGCACTGCTGCTGGGGTGGGTCCCCACGAGGCTGGTACCTGCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CCA 72 bp | TGCCAGGTTCATGAGCAGAATGGTGGATGGCAGGCGTaGCACCCTTGTGGCCAGCACCCACAGCGCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: CQVHEQNGGWQA*HPCGQHPQRQP Trigger: GGGCTGGCGCTGTGGGTGCTGGCCACAAGGGTGCCACGCCTGCCATCCACCATTCTGCTCATGAACCTGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CCA 72 bp | CCAGCGCTGGCCACGCAAGTGGTAAGCCAGTCGTGGTaGCAGCACCAGGGCCAACAGCAGATCAGCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: PALATQVVSQSW*QHQGQQQISHC Trigger: GCAGTGGCTGATCTGCTGTTGGCCCTGGTGCTGCCACCACGACTGGCTTACCACTTGCGTGGCCAGCGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CCA 72 bp | TGGCCAGCGCTGGCCACGCAAGTGGTAAGCCAGTCGTaGTGGCAGCACCAGGGCCAACAGCAGATCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: WPALATQVVSQS*WQHQGQQQISH Trigger: GTGGCTGATCTGCTGTTGGCCCTGGTGCTGCCACCACGACTGGCTTACCACTTGCGTGGCCAGCGCTGGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 72 bp | GCAGTGGCACGAAGCAGCCCAGGACAGCCAGGCAGATaGAGGCCGGTCTCCAGTGGGAGGTCTGCTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AVARSSPGQPGR*RPVSSGRSAQS Trigger: TGACTGAGCAGACCTCCCACTGGAGACCGGCCTTCATCTGCCTGGCTGTCCTGGGCTGCTTCGTGCCACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 72 bp | AGGCCACTGCCGAGAACAGTACCAGGGCTGTCAGTCTaGGTGCATGGCTGTAGCGCTGGCCATTGGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RPLPRTVPGLSV*VHGCSAGHWPP Trigger: TGGCGGCCAATGGCCAGCGCTACAGCCATGCACTCAGACTGACAGCCCTGGTACTGTTCTCGGCAGTGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 72 bp | CACTGCCGAGAACAGTACCAGGGCTGTCAGTCTGAGTaGATGGCTGTAGCGCTGGCCATTGGCCGCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: HCREQYQGCQSE*MAVALAIGRQC Trigger: GCACTGGCGGCCAATGGCCAGCGCTACAGCCATGCACTCAGACTGACAGCCCTGGTACTGTTCTCGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 72 bp | TGGTGGCAGCACCAGGGCCAACAGCAGATCAGCCACTaGCAGGTTCATGAGCAGAATGGTGGATGGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: WWQHQGQQQISH*QVHEQNGGWQA Trigger: CGCCTGCCATCCACCATTCTGCTCATGAACCTGGCAGTGGCTGATCTGCTGTTGGCCCTGGTGCTGCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 72 bp | CAAACAGAGTCCAGTAGTGAGGCGTTGACCACGCAGTaGACGGGCCCGCAAAGGATGCACCAGGGCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: QTESSSEALTTQ*TGPQRMHQGQV Trigger: TACCTGGCCCTGGTGCATCCTTTGCGGGCCCGTGCACTGCGTGGTCAACGCCTCACTACTGGACTCTGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 72 bp | TACATCATCGTAGATGCTGGGGGTCTGGATGCCCTCTaGCAGGCTGATGCTGAGCCCCAGCACCAAAGGATA | + |
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Preference number: 6 (lower is better) Translates to: YIIVDAGGLDAL*QADAEPQHQRI Trigger: TATCCTTTGGTGCTGGGGCTCAGCATCAGCCTGGCAGAGGGCATCCAGACCCCCAGCATCTACGATGATGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS GCA 72 bp | CACCAGCAGCACATTGCTAGGTGTGAAAGAGGCCACTaGCGAGAACAGTACCAGGGCTGTCAGTCTGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: HQQHIARCERGH*REQYQGCQSEC Trigger: GCACTCAGACTGACAGCCCTGGTACTGTTCTCGGCAGTGGCCTCTTTCACACCTAGCAATGTGCTGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS CAA 72 bp | CCTCGTGGATTAGGCTTGTCTGAGGACTTCGGCTCCTaGAGTTCTACTGTGGGACCCAGAGGGCCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: PRGLGLSEDFGS*SSTVGPRGPSW Trigger: CCATGAAGGCCCTCTGGGTCCCACAGTAGAACTCAAGGAGCCGAAGTCCTCAGACAAGCCTAATCCACGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 72 bp | GTATCTGTCCAAGCTGACTGCAGCCAGCAGCAACACTaGACCATACATGTGGCCATAGAGGGCAGCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VSVQADCSQQQH*TIHVAIEGSCG Trigger: GCCACAGCTGCCCTCTATGGCCACATGTATGGTTCAGTGTTGCTGCTGGCTGCAGTCAGCTTGGACAGATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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| CDS TCA 72 bp | TCCATAGAGATTGCCCCAGGCCTCAGGGCTCGGGTTTaGATAGTGCAGCACCAGCAGCACATTGCTAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SIEIAPGLRARV*IVQHQQHIARC Trigger: ACACCTAGCAATGTGCTGCTGGTGCTGCACTATTCAAACCCGAGCCCTGAGGCCTGGGGCAATCTCTATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058099.9 |
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