Pregenerated sensors for F2R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048376Ensembl transcript IDs: ENSMUST00000059193.7
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCCCATCCATCTCTGCTCTCTGGGAGGCATAGCCGAAGGGGTGTaGTGTACCTGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LPIHLCSLGGIAEGV*CTWCSEASMQMAVS Trigger: AGACACAGCCATCTGCATGGAGGCCTCTGAGCACCAGGTACATCACACCCCTTCGGCTATGCCTCCCAGAGAGCAGAGATGGATGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 90 bp | GTGACCAGGGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTaGAGGACAGCTACTGGATGTAAACACACCTTTCTCCTCTCGTCA | + |
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Preference number: 1 (lower is better) Translates to: VTRACGCVCLCKGQP*RTATGCKHTFLLSS Trigger: TGACGAGAGGAGAAAGGTGTGTTTACATCCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 90 bp | CCACTATCCAACAGTGTGACCAGGGCATGTGGGTGTGTCTGTCTGTaGAAGGGCCAGCCTTGCAGGACAGCTACTGGATGTAAACACACC | + |
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Preference number: 1 (lower is better) Translates to: PLSNSVTRACGCVCL*KGQPCRTATGCKHT Trigger: GGTGTGTTTACATCCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTTGGATAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR CCA 90 bp | CTAAAAGACACAGTCAGCTCACAGCTAATGAGAATCCTAGCAGGATaGGGTGGGCCTGGTGCTTCCCATCCATCTCTGCTCTCTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LKDTVSSQLMRILAG*GGPGASHPSLLSGR Trigger: CCTCCCAGAGAGCAGAGATGGATGGGAAGCACCAGGCCCACCCCATCCTGCTAGGATTCTCATTAGCTGTGAGCTGACTGTGTCTTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 90 bp | TGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTCTAGGCTTGGCTaGTTTGTAAGGTTTATTACAGTCCTGGTGAGTCTTATGCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: WCSEASMQMAVSRLG*FVRFITVLVSLMLS Trigger: ACTGAGCATAAGACTCACCAGGACTGTAATAAACCTTACAAAGCAGCCAAGCCTAGACACAGCCATCTGCATGGAGGCCTCTGAGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 90 bp | TCAGTCTTTCATAGTTACTGCCTCCCAAGATGGCATACCTTACCTTaGCAATTTCTAAAAGACACAGTCAGCTCACAGCTAATGAGAATC | + |
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Preference number: 1 (lower is better) Translates to: SVFHSYCLPRWHTLP*QFLKDTVSSQLMRI Trigger: GATTCTCATTAGCTGTGAGCTGACTGTGTCTTTTAGAAATTGGCAAGGTAAGGTATGCCATCTTGGGAGGCAGTAACTATGAAAGACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 90 bp | CGGCCAGGGAATAAACAAAAATGTGTCAAAGTGCAGATTCCCTCCTaGATGACAAATGAGTGTGTGCATACCATCTATATATTAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: RPGNKQKCVKVQIPS*MTNECVHTIYILKS Trigger: TGACTTTAATATATAGATGGTATGCACACACTCATTTGTCATGCAGGAGGGAATCTGCACTTTGACACATTTTTGTTTATTCCCTGGCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CCA 90 bp | GGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTGCAGGACAGCTACTGGCCTAGCAGGATGGGGTaGGCCTGGTGCTTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GMWVCLSVQGPALQDSYWPSRMG*AWCFPS Trigger: GGATGGGAAGCACCAGGCCCACCCCATCCTGCTAGG...CCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR TCA 90 bp | GGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTGCAGGACAGCTACTGGATAGCCGAAGGGGTGTaGTGTACCTGGTGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GMWVCLSVQGPALQDSYWIAEGV*CTWCSE Trigger: CTCTGAGCACCAGGTACATCACACCCCTTCGGCTAT...CCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR GCA 90 bp | ATCCAACAGTGTGACCAGGGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCATGGGGTGGGCCTGGTaGTTCCCATCCATCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IQQCDQGMWVCLSVQGPAMGWAW*FPSISA Trigger: AGCAGAGATGGATGGGAAGCACCAGGCCCACCCCAT...GGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR GCA 90 bp | CCGAAGGGGTGTGATGTACCTGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTATTAGGATCTCCAGCTaGCCAGTGCTAACACCCACC | + |
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Preference number: 2 (lower is better) Translates to: PKGCDVPGAQRPPCRWLCIRISS*PVLTPT Trigger: GGTGGGTGTTAGCACTGGGCAGCTGGAGATCCTAAT...ACACAGCCATCTGCATGGAGGCCTCTGAGCACCAGGTACATCACACCCCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR TCA 90 bp | ATCCAACAGTGTGACCAGGGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCAGATTCCCTCCTGCATaGCAAATGAGTGTGTGCATA | + |
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Preference number: 2 (lower is better) Translates to: IQQCDQGMWVCLSVQGPARFPPA*QMSVCI Trigger: TATGCACACACTCATTTGTCATGCAGGAGGGAATCT...GGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR GCA 90 bp | GGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTGCAGGACAGCTACTGGTGGCATACCTTACCTTaGCAATTTCTAAAAGACACA | + |
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Preference number: 2 (lower is better) Translates to: GMWVCLSVQGPALQDSYWWHTLP*QFLKDT Trigger: TGTGTCTTTTAGAAATTGGCAAGGTAAGGTATGCCA...CCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CCA 90 bp | CTGATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGAGGCCTCCATGCAGATaGCTGTGTCTAGGCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LIGLAYVKYTWSHPAEDKRPPCR*LCLGLA Trigger: AGCCAAGCCTAGACACAGCCATCTGCATGGAGGCCT...CTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCTGTGACCAGGGCATGTaGGTGTGTCTGTCTGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFCDQGM*VCLSVQ Trigger: TTGCACAGACAGACACACCCACATGCCCTGGTCACA...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCTCCAACCTTTTCTCATaGAACCTTCCAGCAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFSNLFS*NLPATL Trigger: AAGGGTTGCTGGAAGGTTCCATGAGAAAAGGTTGGA...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR TCA 90 bp | CTGATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGACGGTATGTTCAAGATaGAAAGTATTAGAGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LIGLAYVKYTWSHPAEDKTVCSR*KVLELP Trigger: GGGAAGCTCTAATACTTTTCATCTTGAACATACCGT...CTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR GCA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCGTGTCTAGGCTTGGCTaGTTTGTAAGGTTTATTACA | + |
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Preference number: 2 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFVSRLG*FVRFIT Trigger: TGTAATAAACCTTACAAAGCAGCCAAGCCTAGACAC...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CAA 90 bp | CCGAAGGGGTGTGATGTACCTGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTTGGGATTCCCCGCTGTaGGCTTTCCAACCTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: PKGCDVPGAQRPPCRWLCWDSPL*AFQPFL Trigger: GAGAAAAGGTTGGAAAGCCAACAGCGGGGAATCCCA...ACACAGCCATCTGCATGGAGGCCTCTGAGCACCAGGTACATCACACCCCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 72 bp | AACAGTGTGACCAGGGCATGTGGGTGTGTCTGTCTGTaGAAGGGCCAGCCTTGCAGGACAGCTACTGGATGT | + |
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Preference number: 3 (lower is better) Translates to: NSVTRACGCVCL*KGQPCRTATGC Trigger: ACATCCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR CCA 72 bp | ACAGCTAATGAGAATCCTAGCAGGATGGGGTGGGCCTaGTGCTTCCCATCCATCTCTGCTCTCTGGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: TANENPSRMGWA*CFPSISALWEA Trigger: TGCCTCCCAGAGAGCAGAGATGGATGGGAAGCACCAGGCCCACCCCATCCTGCTAGGATTCTCATTAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR TCA 72 bp | TCCTATAGTCAGTCTATGGCCCACTATCCAACAGTGTaGCCAGGGCATGTGGGTGTGTCTGTCTGTGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SYSQSMAHYPTV*PGHVGVSVCAR Trigger: CCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTTGGATAGTGGGCCATAGACTGACTATAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CAA 90 bp | CCGAAGGGGTGTGATGTACCTGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTAGTAAATACAGTTCTTaGCAGGGACTAATGGGATTC | + |
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Preference number: 3 (lower is better) Translates to: PKGCDVPGAQRPPCRWLCSKYSS*QGLMGF Trigger: GAATCCCATTAGTCCCTGCAAAGAACTGTATTTACT...ACACAGCCATCTGCATGGAGGCCTCTGAGCACCAGGTACATCACACCCCTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CAA 90 bp | CTGATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGGTGCAAGGGCCAGCCTaGCAGGACAGCTACTGGATG | + |
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Preference number: 3 (lower is better) Translates to: LIGLAYVKYTWSHPAEDKVQGPA*QDSYWM Trigger: CATCCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCAC...CTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 72 bp | ACTACGGACTCCTCCCCTATCATTAGGATCTCCAGCTaGCCAGTGCTAACACCCACCAACTCAGACTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: TTDSSPIIRISS*PVLTPTNSDFV Trigger: AACAAAGTCTGAGTTGGTGGGTGTTAGCACTGGGCAGCTGGAGATCCTAATGATAGGGGAGGAGTCCGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR CCA 72 bp | AGGACAGGACTCGGTTATTCTCCTATAGTCAGTCTATaGCCCACTATCCAACAGTGTGACCAGGGCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: RTGLGYSPIVSL*PTIQQCDQGMW Trigger: CCACATGCCCTGGTCACACTGTTGGATAGTGGGCCATAGACTGACTATAGGAGAATAACCGAGTCCTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR CCA 72 bp | CAGTTCTTTGCAGGGACTAATGGGATTCCCCGCTGTTaGCTTTCCAACCTTTTCTCATGGAACCTTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QFFAGTNGIPRC*LSNLFSWNLPA Trigger: TGCTGGAAGGTTCCATGAGAAAAGGTTGGAAAGCCAACAGCGGGGAATCCCATTAGTCCCTGCAAAGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR GCA 72 bp | ACACTTGGTCACATCCAGCTGAAGACAAGTTCTATGTaGATCATAGCTGACCACATGCCAGCTCTCTGCGTT | + |
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Preference number: 3 (lower is better) Translates to: TLGHIQLKTSSM*IIADHMPALCV Trigger: AACGCAGAGAGCTGGCATGTGGTCAGCTATGATGCACATAGAACTTGTCTTCAGCTGGATGTGACCAAGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CAA 90 bp | AATACACTTGGTCACATCCAGCTGAAGACAAGTTCTATGTGCATCATAGCTGACGTCTTATGCTCAGTCTaGGTCCATGTATTCAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: NTLGHIQLKTSSMCIIADVLCSV*VHVFSK Trigger: CTTACTGAATACATGGACCAAGACTGAGCATAAGAC...GTCAGCTATGATGCACATAGAACTTGTCTTCAGCTGGATGTGACCAAGTGTATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CAA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCATCCAATCTAGACTCTaGATAGCAGAAGTATTCGTG | + |
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Preference number: 3 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFIQSRL*IAEVFV Trigger: CACGAATACTTCTGCTATCAAGAGTCTAGATTGGAT...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR-3UTR CAA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCGGTTTTCCAACAGCCTaGATAATTCTTAAAACTACG | + |
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Preference number: 3 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFGFPTA*IILKTT Trigger: CGTAGTTTTAAGAATTATCAAGGCTGTTGGAAAACC...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR CCA 72 bp | GTTTATTACAGTCCTGGTGAGTCTTATGCTCAGTCTTaGTCCATGTATTCAGTAAGTAAATTGCAAGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: VYYSPGESYAQS*SMYSVSKLQVK Trigger: TTTAACTTGCAATTTACTTACTGAATACATGGACCAAGACTGAGCATAAGACTCACCAGGACTGTAATAAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR CCA 72 bp | ATCTTATACTGTGTTTTTATCCTAATCTATAGCTACTaGAAGCAGAAACTCAGATATGCAAAGCAGTTTAGC | + |
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Preference number: 3 (lower is better) Translates to: ILYCVFILIYSY*KQKLRYAKQFS Trigger: GCTAAACTGCTTTGCATATCTGAGTTTCTGCTTCCAGTAGCTATAGATTAGGATAAAAACACAGTATAAGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR TCA 90 bp | CCGAAGGGGTGTGATGTACCTGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTAGGCGTCCTCGGAGATaGAGGGAGGAGGCGGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: PKGCDVPGAQRPPCRWLCRRPRR*REEAAC Trigger: ACACGCCGCCTCCTCCCTTCATCTCCGAGGACGCCT...ACACAGCCATCTGCATGGAGGCCTCTGAGCACCAGGTACATCACACCCCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR GCA 90 bp | GGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTGCAGGACAGCTACTGGTCGGCCATGGCCAGGTaGAGCATGTACACCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: GMWVCLSVQGPALQDSYWSAMAR*SMYTTA Trigger: GGCCGTGGTGTACATGCTGCACCTGGCCATGGCCGA...CCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CCA 90 bp | ATCCAACAGTGTGACCAGGGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCCGCCAGGACAGGGACTaGATCGGATACACCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: IQQCDQGMWVCLSVQGPARQDRD*IGYTTA Trigger: GGCGGTGGTGTATCCGATCCAGTCCCTGTCCTGGCG...GGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTTGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR TCA 90 bp | GACTCCTCCCCTATCATTAGGATCTCCAGCTGCCCAGTGCTAACACCCACCAACGGGTGGTCTGCTCCTTaGGGAGAAGGGGCACCACCC | + |
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Preference number: 4 (lower is better) Translates to: DSSPIIRISSCPVLTPTNGWSAP*GEGAPP Trigger: GGGTGGTGCCCCTTCTCCTCAAGGAGCAGACCACCC...GTTGGTGGGTGTTAGCACTGGGCAGCTGGAGATCCTAATGATAGGGGAGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR GCA 90 bp | ATCCAACAGTGTGACCAGGGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCGGAACTCGGGTGGTCTaGTCCTTGAGGAGAAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: IQQCDQGMWVCLSVQGPAGTRVV*SLRRRG Trigger: GCCCCTTCTCCTCAAGGAGCAGACCACCCGAGTTCC...GGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR GCA 90 bp | ATCCAACAGTGTGACCAGGGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCCCTCAAGACGAACACTaGGATGGCCAGGACGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: IQQCDQGMWVCLSVQGPAPQDEH*DGQDVQ Trigger: CTGAACGTCCTGGCCATCGCAGTGTTCGTCTTGAGG...GGCTGGCCCTTGCACAGACAGACACACCCACATGCCCTGGTCACACTGTTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CCA 90 bp | GGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTGCAGGACAGCTACTGGAGACGAACACTGCGATaGCCAGGACGTTCAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GMWVCLSVQGPALQDSYWRRTLR*PGRSEE Trigger: TTCCTCTGAACGTCCTGGCCATCGCAGTGTTCGTCT...CCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CCA 90 bp | CCGAAGGGGTGTGATGTACCTGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTTCACTGAGGACGTCGTaGCAGGTGGTGATGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PKGCDVPGAQRPPCRWLCSLRTS*QVVMLS Trigger: ACTCAACATCACCACCTGCCACGACGTCCTCAGTGA...ACACAGCCATCTGCATGGAGGCCTCTGAGCACCAGGTACATCACACCCCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CCA 90 bp | CCGAAGGGGTGTGATGTACCTGGTGCTCAGAGGCCTCCATGCAGATGGCTGTGTGCACAAGAAAGAAGATaGCGGAGAAGGCCGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PKGCDVPGAQRPPCRWLCAQERR*RRRPRS Trigger: ACTTCTCGGCCTTCTCCGCCATCTTCTTTCTTGTGC...ACACAGCCATCTGCATGGAGGCCTCTGAGCACCAGGTACATCACACCCCTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR TCA 90 bp | GGTCACATCCAGCTGAAGACAAGTTCTATGTGCATCATAGCTGACCACATGCCAGGAGGAGGCGGCGTGTaGGGAGGGAGGCTTATATTT | + |
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Preference number: 4 (lower is better) Translates to: GHIQLKTSSMCIIADHMPGGGGV*GGRLIF Trigger: AAATATAAGCCTCCCTCCTCACACGCCGCCTCCTCC...TGGCATGTGGTCAGCTATGATGCACATAGAACTTGTCTTCAGCTGGATGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CCA 90 bp | CTGATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGGCGTCAGCCAGGGGCTaGTCAGATATCCGGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LIGLAYVKYTWSHPAEDKASARG*SDIRRR Trigger: ACGCCTCCGGATATCTGACCAGCCCCTGGCTGACGC...CTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CCA 90 bp | GGTCACATCCAGCTGAAGACAAGTTCTATGTGCATCATAGCTGACCACATGCCAAGAGCACGTCGGCCATaGCCAGGTGCAGCATGTACA | + |
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Preference number: 4 (lower is better) Translates to: GHIQLKTSSMCIIADHMPRARRP*PGAACT Trigger: TGTACATGCTGCACCTGGCCATGGCCGACGTGCTCT...TGGCATGTGGTCAGCTATGATGCACATAGAACTTGTCTTCAGCTGGATGTGACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR GCA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCAAGCCCGCGACTTCTTaGTCCGGTTGGCAACCGCGG | + |
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Preference number: 4 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFKPATS*SGWQPR Trigger: CCGCGGTTGCCAACCGGAGCAAGAAGTCGCGGGCTT...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR TCA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCCCACGGCCGGCTTCTTaGCCTTCATCCTCAAGACGA | + |
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Preference number: 4 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFPRPAS*PSSSRR Trigger: TCGTCTTGAGGATGAAGGTCAAGAAGCCGGCCGTGG...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CCA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCCAATCAGGAGGACGTTaGTGGGCCCAAAGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFQSGGR*WAQSRR Trigger: TCGTCTGCTTTGGGCCCACCAACGTCCTCCTGATTG...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| 3UTR CAA 72 bp | CCCGTCACCTTGCTGGTAATTATCCAATCTAGACTCTaGATAGCAGAAGTATTCGTGCATATCGGATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTLLVIIQSRL*IAEVFVHIGYW Trigger: CCAATATCCGATATGCACGAATACTTCTGCTATCAAGAGTCTAGATTGGATAATTACCAGCAAGGTGACGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR TCA 90 bp | AATACACTTGGTCACATCCAGCTGAAGACAAGTTCTATGTGCATCATAGCTGACATGCTGTTATTCAGGTaGCTAGAGCAGGTATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: NTLGHIQLKTSSMCIIADMLLFR*LEQVSI Trigger: AATGGATACCTGCTCTAGTCACCTGAATAACAGCAT...GTCAGCTATGATGCACATAGAACTTGTCTTCAGCTGGATGTGACCAAGTGTATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR GCA 90 bp | ATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGTTCGATCAGAGCTTTCTTTaGAGCACAAGATGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGLAYVKYTWSHPAEDKFDQSFL*STRCCR Trigger: TCTACAGCATCTTGTGCTGCAAAGAAAGCTCTGATC...GAACTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CAA 90 bp | GGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTGCAGGACAGCTACTGGCGGGTGGTCTGCTCCTaGAGGAGAAGGGGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GMWVCLSVQGPALQDSYWRVVCS*RRRGTT Trigger: GGTGGTGCCCCTTCTCCTCAAGGAGCAGACCACCCG...CCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 90 bp | ACGTCGTGGCAGGTGGTGATGTTGAGTCCCGGAACTCGGGTGGTCTaGTCCTTGAGGAGAAGGGGCACCACCCCCATGATGGCCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: TSWQVVMLSPGTRVV*SLRRRGTTPMMAIT Trigger: GGTGATGGCCATCATGGGGGTGGTGCCCCTTCTCCTCAAGGAGCAGACCACCCGAGTTCCGGGACTCAACATCACCACCTGCCACGACGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS TCA 90 bp | CGTCGGCCATGGCCAGGTGCAGCATGTACACCACGGCCGGCTTCTTaGCCTTCATCCTCAAGACGAACACTGCGATGGCCAGGACGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRPWPGAACTPRPAS*PSSSRRTLRWPGRS Trigger: TGAACGTCCTGGCCATCGCAGTGTTCGTCTTGAGGATGAAGGTCAAGAAGCCGGCCGTGGTGTACATGCTGCACCTGGCCATGGCCGACG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CCA 90 bp | ACGCAAGTGAAGTTGGCTCGGCCCAGAGTGCGCCAGGACAGGGACTaGATCGGATACACCACCGCCAGGAACCGGTCAATGCTTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: TQVKLARPRVRQDRD*IGYTTARNRSMLMT Trigger: GGTCATAAGCATTGACCGGTTCCTGGCGGTGGTGTATCCGATCCAGTCCCTGTCCTGGCGCACTCTGGGCCGAGCCAACTTCACTTGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CAA 90 bp | GGCATGTGGGTGTGTCTGTCTGTGCAAGGGCCAGCCTTGCAGGACAGCTACTGGACAATCAGGAGGACGTaGGTGGGCCCAAAGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: GMWVCLSVQGPALQDSYWTIRRT*VGPKQT Trigger: CGTCTGCTTTGGGCCCACCAACGTCCTCCTGATTGT...CCAGTAGCTGTCCTGCAAGGCTGGCCCTTGCACAGACAGACACACCCACATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CAA 90 bp | GACTCCTCCCCTATCATTAGGATCTCCAGCTGCCCAGTGCTAACACCCACCAACGACTTCTTGCTCCGGTaGGCAACCGCGGAGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSPIIRISSCPVLTPTNDFLLR*ATAEEL Trigger: GAGCTCCTCCGCGGTTGCCAACCGGAGCAAGAAGTC...GTTGGTGGGTGTTAGCACTGGGCAGCTGGAGATCCTAATGATAGGGGAGGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS TCA 90 bp | ACTTCTTGCTCCGGTTGGCAACCGCGGAGGAGCTCAGGCACCGGATaGTGGACGTGTAGCAGACCGTGGAAACGATCAACGGCACAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSCSGWQPRRSSGTG*WTCSRPWKRSTAQE Trigger: TTCTTGTGCCGTTGATCGTTTCCACGGTCTGCTACACGTCCATCATCCGGTGCCTGAGCTCCTCCGCGGTTGCCAACCGGAGCAAGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS TCA 90 bp | GGTAGTGCACAATCAGGAGGACGTTGGTGGGCCCAAAGCAGACGATaGAGATGCAGAACACCGCGGCAGACAGGAACAAAGCCCGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSAQSGGRWWAQSRR*RCRTPRQTGTKPAT Trigger: AGTCGCGGGCTTTGTTCCTGTCTGCCGCGGTGTTCTGCATCTTCATCGTCTGCTTTGGGCCCACCAACGTCCTCCTGATTGTGCACTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 90 bp | GACCGTCATGAGCATGATGGAGGCGTACATGTTCCCGTAAAACGCTaGGGTGGCGAAGCGGCACATTCCAGACCCGAACTGCCAATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DRHEHDGGVHVPVKR*GGEAAHSRPELPIS Trigger: ACTGATTGGCAGTTCGGGTCTGGAATGTGCCGCTTCGCCACCGCAGCGTTTTACGGGAACATGTACGCCTCCATCATGCTCATGACGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 90 bp | GCCTCTGGCACTCGGAGGAGGCGTAGTAGTAAATCAACGGATCGATaGAGCAGCTCACGCTGCTCACACAGACGCAGAGGAGGTAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASGTRRRRSSKSTDR*SSSRCSHRRRGGKQ Trigger: TTGCTTACCTCCTCTGCGTCTGTGTGAGCAGCGTGAGCTGCTGCATCGATCCGTTGATTTACTACTACGCCTCCTCCGAGTGCCAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 90 bp | GCTCACGCTGCTCACACAGACGCAGAGGAGGTAAGCAAAGTAGGCTaGCTCTGTACCAGGACTGTCGGAGAGGAAAAGGTAGTGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: AHAAHTDAEEVSKVG*LCTRTVGEEKVVHN Trigger: ATTGTGCACTACCTTTTCCTCTCCGACAGTCCTGGTACAGAGGCAGCCTACTTTGCTTACCTCCTCTGCGTCTGTGTGAGCAGCGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 90 bp | AGGAGGCGTAGTAGTAAATCAACGGATCGATGCAGCAGCTCACGCTaGTCACACAGACGCAGAGGAGGTAAGCAAAGTAGGCTGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRRSSKSTDRCSSSR*SHRRRGGKQSRLPL Trigger: CAGAGGCAGCCTACTTTGCTTACCTCCTCTGCGTCTGTGTGAGCAGCGTGAGCTGCTGCATCGATCCGTTGATTTACTACTACGCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 90 bp | GTACACCACGGCCGGCTTCTTGACCTTCATCCTCAAGACGAACACTaGGATGGCCAGGACGTTCAGAGGAAGGCTGACAATGAACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: VHHGRLLDLHPQDEH*DGQDVQRKADNEHN Trigger: ATTGTGTTCATTGTCAGCCTTCCTCTGAACGTCCTGGCCATCGCAGTGTTCGTCTTGAGGATGAAGGTCAAGAAGCCGGCCGTGGTGTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CAA 90 bp | CTGATAGGCCTTGCTTATGTGAAATACACTTGGTCACATCCAGCTGAAGACAAGAAAGCCCGCGACTTCTaGCTCCGGTTGGCAACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LIGLAYVKYTWSHPAEDKKARDF*LRLATA Trigger: CGCGGTTGCCAACCGGAGCAAGAAGTCGCGGGCTTT...CTTGTCTTCAGCTGGATGTGACCAAGTGTATTTCACATAAGCAAGGCCTATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CAA 90 bp | GGTCACATCCAGCTGAAGACAAGTTCTATGTGCATCATAGCTGACCACATGCCAAGCTGGCCGGTGCTGTaGCAACTGTTGGGATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GHIQLKTSSMCIIADHMPSWPVL*QLLGSE Trigger: CTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCT...TGGCATGTGGTCAGCTATGATGCACATAGAACTTGTCTTCAGCTGGATGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 90 bp | TGCTGTTGCAACTGTTGGGATCAGAGCTTTCTTTGCAGCACAAGATaGTGTAGAGGTGCCTCTGGCACTCGGAGGAGGCGTAGTAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCCNCWDQSFLCSTR*CRGASGTRRRRSSK Trigger: TTTACTACTACGCCTCCTCCGAGTGCCAGAGGCACCTCTACAGCATCTTGTGCTGCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CCA 90 bp | TATCCATTTTACTCGGCATCAGCTGGCCGGTGCTGTTGCAACTGTTaGGATCAGAGCTTTCTTTGCAGCACAAGATGCTGTAGAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YPFYSASAGRCCCNC*DQSFLCSTRCCRGA Trigger: GGCACCTCTACAGCATCTTGTGCTGCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCTGATGCCGAGTAAAATGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CCA 90 bp | ACGTGTAGCAGACCGTGGAAACGATCAACGGCACAAGAAAGAAGATaGCGGAGAAGGCCGAGAAGTAGTACGAGTAAAAGCCTTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TCSRPWKRSTAQERR*RRRPRSSTSKSLAS Trigger: TGATGCAAGGCTTTTACTCGTACTACTTCTCGGCCTTCTCCGCCATCTTCTTTCTTGTGCCGTTGATCGTTTCCACGGTCTGCTACACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS-3UTR CAA 90 bp | GTCAGAGAATCAGATTATTTCCATAGTAACGGCCAGGGAATAAACAAAAATGTGGTGCTGTTGCAACTGTaGGGATCAGAGCTTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRESDYFHSNGQGINKNVVLLQL*GSELSL Trigger: CAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCAC...CACATTTTTGTTTATTCCCTGGCCGTTACTATGGAAATAATCTGATTCTCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | ACACCGCGGCAGACAGGAACAAAGCCCGCGACTTCTTaGTCCGGTTGGCAACCGCGGAGGAGCTCAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TPRQTGTKPATS*SGWQPRRSSGT Trigger: GGTGCCTGAGCTCCTCCGCGGTTGCCAACCGGAGCAAGAAGTCGCGGGCTTTGTTCCTGTCTGCCGCGGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS TCA 72 bp | AGGGGCTGGTCAGATATCCGGAGGCGTCCTCGGAGATaGAGGGAGGAGGCGGCGTGTGAGGAGGGAGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RGWSDIRRRPRR*REEAACEEGGL Trigger: TAAGCCTCCCTCCTCACACGCCGCCTCCTCCCTTCATCTCCGAGGACGCCTCCGGATATCTGACCAGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | AACACCGCGGCAGACAGGAACAAAGCCCGCGACTTCTaGCTCCGGTTGGCAACCGCGGAGGAGCTCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NTAADRNKARDF*LRLATAEELRH Trigger: GTGCCTGAGCTCCTCCGCGGTTGCCAACCGGAGCAAGAAGTCGCGGGCTTTGTTCCTGTCTGCCGCGGTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CCA 72 bp | AAGTTGGCTCGGCCCAGAGTGCGCCAGGACAGGGACTaGATCGGATACACCACCGCCAGGAACCGGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: KLARPRVRQDRD*IGYTTARNRSM Trigger: CATTGACCGGTTCCTGGCGGTGGTGTATCCGATCCAGTCCCTGTCCTGGCGCACTCTGGGCCGAGCCAACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | GCAGACAGGAACAAAGCCCGCGACTTCTTGCTCCGGTaGGCAACCGCGGAGGAGCTCAGGCACCGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: ADRNKARDFLLR*ATAEELRHRMM Trigger: CATCATCCGGTGCCTGAGCTCCTCCGCGGTTGCCAACCGGAGCAAGAAGTCGCGGGCTTTGTTCCTGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 90 bp | AAGATGCAGAACACCGCGGCAGACAGGAACAAAGCCCGCGACTTCTaGCTCCGGTTGGCAACCGCGGAGGAGCTCAGGCACCGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: KMQNTAADRNKARDF*LRLATAEELRHRMM Trigger: CATCATCCGGTGCCTGAGCTCCTCCGCGGTTGCCAACCGGAGCAAGAAGTCGCGGGCTTTGTTCCTGTCTGCCGCGGTGTTCTGCATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS TCA 72 bp | TCCGGTTGGCAACCGCGGAGGAGCTCAGGCACCGGATaGTGGACGTGTAGCAGACCGTGGAAACGATCAACG | + |
|
Preference number: 6 (lower is better) Translates to: SGWQPRRSSGTG*WTCSRPWKRST Trigger: CGTTGATCGTTTCCACGGTCTGCTACACGTCCATCATCCGGTGCCTGAGCTCCTCCGCGGTTGCCAACCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | GTGATGTTGAGTCCCGGAACTCGGGTGGTCTGCTCCTaGAGGAGAAGGGGCACCACCCCCATGATGGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VMLSPGTRVVCS*RRRGTTPMMAI Trigger: GATGGCCATCATGGGGGTGGTGCCCCTTCTCCTCAAGGAGCAGACCACCCGAGTTCCGGGACTCAACATCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 90 bp | ACGTCGGCCATGGCCAGGTGCAGCATGTACACCACGGCCGGCTTCTaGACCTTCATCCTCAAGACGAACACTGCGATGGCCAGGACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSAMARCSMYTTAGF*TFILKTNTAMARTF Trigger: GAACGTCCTGGCCATCGCAGTGTTCGTCTTGAGGATGAAGGTCAAGAAGCCGGCCGTGGTGTACATGCTGCACCTGGCCATGGCCGACGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 90 bp | TGGCAGGTGGTGATGTTGAGTCCCGGAACTCGGGTGGTCTGCTCCTaGAGGAGAAGGGGCACCACCCCCATGATGGCCATCACCCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: WQVVMLSPGTRVVCS*RRRGTTPMMAITQM Trigger: CATTTGGGTGATGGCCATCATGGGGGTGGTGCCCCTTCTCCTCAAGGAGCAGACCACCCGAGTTCCGGGACTCAACATCACCACCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 90 bp | CCTTGCATCAGGTTCTCACTGAGGACGTCGTGGCAGGTGGTGATGTaGAGTCCCGGAACTCGGGTGGTCTGCTCCTTGAGGAGAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PCIRFSLRTSWQVVM*SPGTRVVCSLRRRG Trigger: GCCCCTTCTCCTCAAGGAGCAGACCACCCGAGTTCCGGGACTCAACATCACCACCTGCCACGACGTCCTCAGTGAGAACCTGATGCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | ATGATGGCCATCACCCAAATGACCACGCAAGTGAAGTaGGCTCGGCCCAGAGTGCGCCAGGACAGGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: MMAITQMTTQVK*ARPRVRQDRDW Trigger: CCAGTCCCTGTCCTGGCGCACTCTGGGCCGAGCCAACTTCACTTGCGTGGTCATTTGGGTGATGGCCATCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | AGGTTCTCACTGAGGACGTCGTGGCAGGTGGTGATGTaGAGTCCCGGAACTCGGGTGGTCTGCTCCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RFSLRTSWQVVM*SPGTRVVCSLR Trigger: CCTCAAGGAGCAGACCACCCGAGTTCCGGGACTCAACATCACCACCTGCCACGACGTCCTCAGTGAGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | GAGCATGATGGAGGCGTACATGTTCCCGTAAAACGCTaGGGTGGCGAAGCGGCACATTCCAGACCCGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: EHDGGVHVPVKR*GGEAAHSRPEL Trigger: CAGTTCGGGTCTGGAATGTGCCGCTTCGCCACCGCAGCGTTTTACGGGAACATGTACGCCTCCATCATGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | ATGGCCAGGTGCAGCATGTACACCACGGCCGGCTTCTaGACCTTCATCCTCAAGACGAACACTGCGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MARCSMYTTAGF*TFILKTNTAMA Trigger: GGCCATCGCAGTGTTCGTCTTGAGGATGAAGGTCAAGAAGCCGGCCGTGGTGTACATGCTGCACCTGGCCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS TCA 72 bp | CAATCAGGAGGACGTTGGTGGGCCCAAAGCAGACGATaGAGATGCAGAACACCGCGGCAGACAGGAACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QSGGRWWAQSRR*RCRTPRQTGTK Trigger: CTTTGTTCCTGTCTGCCGCGGTGTTCTGCATCTTCATCGTCTGCTTTGGGCCCACCAACGTCCTCCTGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | GGCCGGCTTCTTGACCTTCATCCTCAAGACGAACACTaGGATGGCCAGGACGTTCAGAGGAAGGCTGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: GRLLDLHPQDEH*DGQDVQRKADN Trigger: ATTGTCAGCCTTCCTCTGAACGTCCTGGCCATCGCAGTGTTCGTCTTGAGGATGAAGGTCAAGAAGCCGGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | GGCGGAGAAGGCCGAGAAGTAGTACGAGTAAAAGCCTaGCATCAGGTTCTCACTGAGGACGTCGTGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGEGREVVRVKA*HQVLTEDVVAG Trigger: ACCTGCCACGACGTCCTCAGTGAGAACCTGATGCAAGGCTTTTACTCGTACTACTTCTCGGCCTTCTCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | GCTCACACAGACGCAGAGGAGGTAAGCAAAGTAGGCTaGCTCTGTACCAGGACTGTCGGAGAGGAAAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AHTDAEEVSKVG*LCTRTVGEEKV Trigger: TACCTTTTCCTCTCCGACAGTCCTGGTACAGAGGCAGCCTACTTTGCTTACCTCCTCTGCGTCTGTGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | AACTGTTGGGATCAGAGCTTTCTTTGCAGCACAAGATaGTGTAGAGGTGCCTCTGGCACTCGGAGGAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: NCWDQSFLCSTR*CRGASGTRRRR Trigger: ACGCCTCCTCCGAGTGCCAGAGGCACCTCTACAGCATCTTGTGCTGCAAAGAAAGCTCTGATCCCAACAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CCA 72 bp | TACTCGGCATCAGCTGGCCGGTGCTGTTGCAACTGTTaGGATCAGAGCTTTCTTTGCAGCACAAGATGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YSASAGRCCCNC*DQSFLCSTRCC Trigger: ACAGCATCTTGTGCTGCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCTGATGCCGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | TTACTCGGCATCAGCTGGCCGGTGCTGTTGCAACTGTaGGGATCAGAGCTTTCTTTGCAGCACAAGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGISWPVLLQL*GSELSLQHKML Trigger: CAGCATCTTGTGCTGCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCTGATGCCGAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 90 bp | AAAGAAGATGGCGGAGAAGGCCGAGAAGTAGTACGAGTAAAAGCCTaGCATCAGGTTCTCACTGAGGACGTCGTGGCAGGTGGTGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: KEDGGEGREVVRVKA*HQVLTEDVVAGGDV Trigger: AACATCACCACCTGCCACGACGTCCTCAGTGAGAACCTGATGCAAGGCTTTTACTCGTACTACTTCTCGGCCTTCTCCGCCATCTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 90 bp | CTAGAGCAGGTATCCATTTTACTCGGCATCAGCTGGCCGGTGCTGTaGCAACTGTTGGGATCAGAGCTTTCTTTGCAGCACAAGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LEQVSILLGISWPVL*QLLGSELSLQHKML Trigger: CAGCATCTTGTGCTGCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCTGATGCCGAGTAAAATGGATACCTGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | AGTAGTAAATCAACGGATCGATGCAGCAGCTCACGCTaGTCACACAGACGCAGAGGAGGTAAGCAAAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSKSTDRCSSSR*SHRRRGGKQSR Trigger: CCTACTTTGCTTACCTCCTCTGCGTCTGTGTGAGCAGCGTGAGCTGCTGCATCGATCCGTTGATTTACTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | AGCAGGTATCCATTTTACTCGGCATCAGCTGGCCGGTaGTGTTGCAACTGTTGGGATCAGAGCTTTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SRYPFYSASAGR*CCNCWDQSFLC Trigger: GCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCTGATGCCGAGTAAAATGGATACCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CAA 72 bp | GTATCCATTTTACTCGGCATCAGCTGGCCGGTGCTGTaGCAACTGTTGGGATCAGAGCTTTCTTTGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VSILLGISWPVL*QLLGSELSLQH Trigger: GTGCTGCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCTGATGCCGAGTAAAATGGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS GCA 72 bp | TATCCATTTTACTCGGCATCAGCTGGCCGGTGCTGTTaGAACTGTTGGGATCAGAGCTTTCTTTGCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: YPFYSASAGRCC*NCWDQSFLCST Trigger: TGTGCTGCAAAGAAAGCTCTGATCCCAACAGTTGCAACAGCACCGGCCAGCTGATGCCGAGTAAAATGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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| CDS CCA 72 bp | AGACCGTGGAAACGATCAACGGCACAAGAAAGAAGATaGCGGAGAAGGCCGAGAAGTAGTACGAGTAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RPWKRSTAQERR*RRRPRSSTSKS Trigger: GCTTTTACTCGTACTACTTCTCGGCCTTCTCCGCCATCTTCTTTCTTGTGCCGTTGATCGTTTCCACGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059193.7 |
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