Pregenerated sensors for F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027249Ensembl transcript IDs: ENSMUST00000028681.15, ENSMUST00000111335.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTAGGTTGCCCTTTCGGAGCTCCTCCAGGAAGCCACTGTTGGCTCTaGGGACCCGCTGGAGCAGCGATAGTGCTTGCTGAGGCGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGCPFGAPPGSHCWL*GPAGAAIVLAEAPG Trigger: TCCTGGCGCCTCAGCAAGCACTATCGCTGCTCCAGCGGGTCCGCAGAGCCAACAGTGGCTTCCTGGAGGAGCTCCGAAAGGGCAACCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 90 bp | CCACTGTTGGCTCTGCGGACCCGCTGGAGCAGCGATAGTGCTTGCTaGGGCGCCAGGAACACATGCTGGCTGTGTACCAGGCTAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLALRTRWSSDSAC*GARNTCWLCTRLTR Trigger: CCTGGTTAGCCTGGTACACAGCCAGCATGTGTTCCTGGCGCCTCAGCAAGCACTATCGCTGCTCCAGCGGGTCCGCAGAGCCAACAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 90 bp | GGCAGAAGTTCTCCTTCAGGTCTGCCCCAGGATGGGTGGTGGAGTTaGTTTCAGGCTTGTGGGGGTAGCGGCTCCGCCACAGCTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GRSSPSGLPQDGWWS*FQACGGSGSATAGT Trigger: AGTGCCAGCTGTGGCGGAGCCGCTACCCCCACAAGCCTGAAATCAACTCCACCACCCATCCTGGGGCAGACCTGAAGGAGAACTTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 90 bp | CAGGGCAGGCAGGGGGACCCAAGTGTTGTCACAGCCAAATTCCCCTaGTATAGTCGGCCACGCTCAGTGAGGCACTGTCCCAGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGRQGDPSVVTAKFP*YSRPRSVRHCPSGG Trigger: ACCTCCACTGGGACAGTGCCTCACTGAGCGTGGCCGACTATACCAGGGGAATTTGGCTGTGACAACACTTGGGTCCCCCTGCCTGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 90 bp | GAACCTCCAGAGCGAGGAGTCATCACCACAGTGGTACGGCCCTCCTaGCCACAGACAGGGACACTGCATTCCTCTCTGCGCACAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPPERGVITTVVRPS*PQTGTLHSSLRTVG Trigger: TCCTACTGTGCGCAGAGAGGAATGCAGTGTCCCTGTCTGTGGCCAGGAGGGCCGTACCACTGTGGTGATGACTCCTCGCTCTGGAGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028681.15 |
||
| CDS CCA 90 bp | CGAGTTTCACCTCGGGGTCGAAGTCTTGGTACTTGCTCAGGGTCTTaGCTGGTAAGCTGTTCCAGGGCAGGCAGGGGGACCCAAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVSPRGRSLGTCSGS*LVSCSRAGRGTQVL Trigger: CAACACTTGGGTCCCCCTGCCTGCCCTGGAACAGCTTACCAGCCAAGACCCTGAGCAAGTACCAAGACTTCGACCCCGAGGTGAAACTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 90 bp | GAACCTCCAGAGCGAGGAGTCATCACCACAGTGGTACGGCCCTCCTaGCAGACAGGGACACTGCATTCCTCTCTGCGCACAGTAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: EPPERGVITTVVRPS*QTGTLHSSLRTVGS Trigger: AGATCCTACTGTGCGCAGAGAGGAATGCAGTGTCCCTGTCTGCCAGGAGGGCCGTACCACTGTGGTGATGACTCCTCGCTCTGGAGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111335.2 |
||
| CDS CCA 90 bp | ACAGATTGTCCTTGGAACCTCCAGAGCGAGGAGTCATCACCACAGTaGTACGGCCCTCCTGGCCACAGACAGGGACACTGCATTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TDCPWNLQSEESSPQ*YGPPGHRQGHCIPL Trigger: GAGAGGAATGCAGTGTCCCTGTCTGTGGCCAGGAGGGCCGTACCACTGTGGTGATGACTCCTCGCTCTGGAGGTTCCAAGGACAATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028681.15 |
||
| CDS CCA 90 bp | GAACATGTTGTCAGTAATTCGAATCCGGGTGGAGGCCTTGCACACTaGCCGCTCTACAATGGGCAGGTTCACCACCTGCAGGACGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EHVVSNSNPGGGLAH*PLYNGQVHHLQDAG Trigger: CCCAGCGTCCTGCAGGTGGTGAACCTGCCCATTGTAGAGCGGCCAGTGTGCAAGGCCTCCACCCGGATTCGAATTACTGACAACATGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 90 bp | CAATGGGCAGGTTCACCACCTGCAGGACGCTGGGCTGTATCTCATTaGTGTTGGTTGTCCATGTCTCCCGAAGGTTGCCCCAGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QWAGSPPAGRWAVSH*CWLSMSPEGCPSLS Trigger: TGACAGGCTGGGGCAACCTTCGGGAGACATGGACAACCAACATCAATGAGATACAGCCCAGCGTCCTGCAGGTGGTGAACCTGCCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 90 bp | GAGGCCTTGCACACTGGCCGCTCTACAATGGGCAGGTTCACCACCTaGAGGACGCTGGGCTGTATCTCATTGATGTTGGTTGTCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: EALHTGRSTMGRFTT*RTLGCISLMLVVHV Trigger: GACATGGACAACCAACATCAATGAGATACAGCCCAGCGTCCTGCAGGTGGTGAACCTGCCCATTGTAGAGCGGCCAGTGTGCAAGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 90 bp | GTGTTGTCACAGCCAAATTCCCCTGGTATAGTCGGCCACGCTCAGTaGGGCACTGTCCCAGTGGAGGTGACAGATTGTCCTTGGAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLSQPNSPGIVGHAQ*GTVPVEVTDCPWNL Trigger: GAGGTTCCAAGGACAATCTGTCACCTCCACTGGGACAGTGCCTCACTGAGCGTGGCCGACTATACCAGGGGAATTTGGCTGTGACAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 90 bp | TGGTTCGGGAATGCTTGCCAATGCGCACCAGGAGGTCATTCTCAGTaGAGTTCTTGTCCCAGGGTGGGTACAGAATGCAGTGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WFGNACQCAPGGHSQ*SSCPRVGTECSGQQ Trigger: CTGCTGCCCACTGCATTCTGTACCCACCCTGGGACAAGAACTTCACTGAGAATGACCTCCTGGTGCGCATTGGCAAGCATTCCCGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 90 bp | TTGCGGCAGAAGTTTTCCACGAGTTTCACCTCGGGGTCGAAGTCTTaGTACTTGCTCAGGGTCTTGGCTGGTAAGCTGTTCCAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRQKFSTSFTSGSKS*YLLRVLAGKLFQGR Trigger: CCTGCCCTGGAACAGCTTACCAGCCAAGACCCTGAGCAAGTACCAAGACTTCGACCCCGAGGTGAAACTCGTGGAAAACTTCTGCCGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 90 bp | TGCCCCAGCCTGTCACCCGCCCTTTATAACCAGCCCGGAGCAAGCTaGTTACTGTCTGCTTGTCTGGCAAACACACGGGGTGAATATAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPSLSPALYNQPGAS*LLSACLANTRGEYS Trigger: ACTATATTCACCCCGTGTGTTTGCCAGACAAGCAGACAGTAACCAGCTTGCTCCGGGCTGGTTATAAAGGGCGGGTGACAGGCTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 90 bp | GTCTTTCAACGACTTCTTCTCGAACAAAGGCCGCAGGCCACAGTCTaGCTCCCCAAGGCCGAAGGTCTTCTCATTGAAGAAGGTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFQRLLLEQRPQATV*LPKAEGLLIEEGVE Trigger: TTCCACACCTTCTTCAATGAGAAGACCTTCGGCCTTGGGGAGGCAGACTGTGGCCTGCGGCCTTTGTTCGAGAAGAAGTCGTTGAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 90 bp | GCGACCTTCCAGACAGTCCATGAAAGTCTCTCGAGGTTTCCTCACTaGATCACACACTGTGTACTTGGCCCAGAACACGTCTGTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATFQTVHESLSRFPH*ITHCVLGPEHVCVL Trigger: CAAGACACAGACGTGTTCTGGGCCAAGTACACAGTGTGTGATTCAGTGAGGAAACCTCGAGAGACTTTCATGGACTGTCTGGAAGGTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 90 bp | CCCTTTATAACCAGCCCGGAGCAAGCTGGTTACTGTCTGCTTGTCTaGCAAACACACGGGGTGAATATAGTCACTGAAGGGTACAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PFITSPEQAGYCLLV*QTHGVNIVTEGYRF Trigger: AAACCTGTACCCTTCAGTGACTATATTCACCCCGTGTGTTTGCCAGACAAGCAGACAGTAACCAGCTTGCTCCGGGCTGGTTATAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 90 bp | AGCATGGAGATCTTTTCAACATTCCGCTCATATCTGGTTCGGGAATaGTTGCCAATGCGCACCAGGAGGTCATTCTCAGTGAAGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SMEIFSTFRSYLVRE*LPMRTRRSFSVKFL Trigger: CAAGAACTTCACTGAGAATGACCTCCTGGTGCGCATTGGCAAGCATTCCCGAACCAGATATGAGCGGAATGTTGAAAAGATCTCCATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 72 bp | GCTCTGCGGACCCGCTGGAGCAGCGATAGTGCTTGCTaGGGCGCCAGGAACACATGCTGGCTGTGTACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRTRWSSDSAC*GARNTCWLCTR Trigger: CCTGGTACACAGCCAGCATGTGTTCCTGGCGCCTCAGCAAGCACTATCGCTGCTCCAGCGGGTCCGCAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | TCCGGGTGGAGGCCTTGCACACTGGCCGCTCTACAATaGGCAGGTTCACCACCTGCAGGACGCTGGGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SGWRPCTLAALQ*AGSPPAGRWAV Trigger: TACAGCCCAGCGTCCTGCAGGTGGTGAACCTGCCCATTGTAGAGCGGCCAGTGTGCAAGGCCTCCACCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 72 bp | CCTTTCGGAGCTCCTCCAGGAAGCCACTGTTGGCTCTaGGGACCCGCTGGAGCAGCGATAGTGCTTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PFGAPPGSHCWL*GPAGAAIVLAE Trigger: CTCAGCAAGCACTATCGCTGCTCCAGCGGGTCCGCAGAGCCAACAGTGGCTTCCTGGAGGAGCTCCGAAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | GGTTGCCCTTTCGGAGCTCCTCCAGGAAGCCACTGTTaGCTCTGCGGACCCGCTGGAGCAGCGATAGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GCPFGAPPGSHC*LCGPAGAAIVL Trigger: AAGCACTATCGCTGCTCCAGCGGGTCCGCAGAGCCAACAGTGGCTTCCTGGAGGAGCTCCGAAAGGGCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | GAGCGAGGAGTCATCACCACAGTGGTACGGCCCTCCTaGCCACAGACAGGGACACTGCATTCCTCTCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ERGVITTVVRPS*PQTGTLHSSLR Trigger: GCGCAGAGAGGAATGCAGTGTCCCTGTCTGTGGCCAGGAGGGCCGTACCACTGTGGTGATGACTCCTCGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028681.15 |
||
| CDS CCA 72 bp | CCTTGGAACCTCCAGAGCGAGGAGTCATCACCACAGTaGTACGGCCCTCCTGGCCACAGACAGGGACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PWNLQSEESSPQ*YGPPGHRQGHC Trigger: GCAGTGTCCCTGTCTGTGGCCAGGAGGGCCGTACCACTGTGGTGATGACTCCTCGCTCTGGAGGTTCCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028681.15 |
||
| CDS TCA 72 bp | TCTCCTTCAGGTCTGCCCCAGGATGGGTGGTGGAGTTaGTTTCAGGCTTGTGGGGGTAGCGGCTCCGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SPSGLPQDGWWS*FQACGGSGSAT Trigger: TGTGGCGGAGCCGCTACCCCCACAAGCCTGAAATCAACTCCACCACCCATCCTGGGGCAGACCTGAAGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 72 bp | TTCAAAGTCGCCAGGCTGCCCCGCAACATAGCACCATaGGCCCTCCTCATCCCAGTCTGGGTTGCGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FKVARLPRNIAP*ALLIPVWVAAE Trigger: TTCTGCCGCAACCCAGACTGGGATGAGGAGGGCGCATGGTGCTATGTTGCGGGGCAGCCTGGCGACTTTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | GAGCGAGGAGTCATCACCACAGTGGTACGGCCCTCCTaGCAGACAGGGACACTGCATTCCTCTCTGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ERGVITTVVRPS*QTGTLHSSLRT Trigger: TGTGCGCAGAGAGGAATGCAGTGTCCCTGTCTGCCAGGAGGGCCGTACCACTGTGGTGATGACTCCTCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | ACCTCGGGGTCGAAGTCTTGGTACTTGCTCAGGGTCTaGGCTGGTAAGCTGTTCCAGGGCAGGCAGGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TSGSKSWYLLRV*AGKLFQGRQGD Trigger: GTCCCCCTGCCTGCCCTGGAACAGCTTACCAGCCAAGACCCTGAGCAAGTACCAAGACTTCGACCCCGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | CCACGCTCAGTGAGGCACTGTCCCAGTGGAGGTGACAGATTGTCCTaGGAACCTCCAGAGCGAGGAGTCATCACCACAGTGGTACGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PRSVRHCPSGGDRLS*EPPERGVITTVVRP Trigger: GGGCCGTACCACTGTGGTGATGACTCCTCGCTCTGGAGGTTCCAAGGACAATCTGTCACCTCCACTGGGACAGTGCCTCACTGAGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | GGCAGGTTCACCACCTGCAGGACGCTGGGCTGTATCTCATTGATGTaGGTTGTCCATGTCTCCCGAAGGTTGCCCCAGCCTGTCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GRFTTCRTLGCISLM*VVHVSRRLPQPVTR Trigger: GCGGGTGACAGGCTGGGGCAACCTTCGGGAGACATGGACAACCAACATCAATGAGATACAGCCCAGCGTCCTGCAGGTGGTGAACCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 72 bp | TCGGCCACGCTCAGTGAGGCACTGTCCCAGTGGAGGTaGCAGATTGTCCTTGGAACCTCCAGAGCGAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SATLSEALSQWR*QIVLGTSRARS Trigger: ACTCCTCGCTCTGGAGGTTCCAAGGACAATCTGTCACCTCCACTGGGACAGTGCCTCACTGAGCGTGGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | CAGGGGGACCCAAGTGTTGTCACAGCCAAATTCCCCTaGTATAGTCGGCCACGCTCAGTGAGGCACTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QGDPSVVTAKFP*YSRPRSVRHCP Trigger: GGGACAGTGCCTCACTGAGCGTGGCCGACTATACCAGGGGAATTTGGCTGTGACAACACTTGGGTCCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | CGGTCACTGATAAGGCTGGCCCCACACAGCAGCTCTTaGGGACTCTTCCGAAAAAGCATCACCTGCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLIRLAPHSSS*GLFRKSITCQG Trigger: CCCCTGGCAGGTGATGCTTTTTCGGAAGAGTCCCCAAGAGCTGCTGTGTGGGGCCAGCCTTATCAGTGACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | CCTTGGAACCTCCAGAGCGAGGAGTCATCACCACAGTaGTACGGCCCTCCTGGCAGACAGGGACACTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: PWNLQSEESSPQ*YGPPGRQGHCI Trigger: AATGCAGTGTCCCTGTCTGCCAGGAGGGCCGTACCACTGTGGTGATGACTCCTCGCTCTGGAGGTTCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | AGTCGGCCACGCTCAGTGAGGCACTGTCCCAGTGGAGGTGACAGATaGTCCTTGGAACCTCCAGAGCGAGGAGTCATCACCACAGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SRPRSVRHCPSGGDR*SLEPPERGVITTVV Trigger: TACCACTGTGGTGATGACTCCTCGCTCTGGAGGTTCCAAGGACAATCTGTCACCTCCACTGGGACAGTGCCTCACTGAGCGTGGCCGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | ACGAGTTTCACCTCGGGGTCGAAGTCTTGGTACTTGCTCAGGGTCTaGGCTGGTAAGCTGTTCCAGGGCAGGCAGGGGGACCCAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TSFTSGSKSWYLLRV*AGKLFQGRQGDPSV Trigger: AACACTTGGGTCCCCCTGCCTGCCCTGGAACAGCTTACCAGCCAAGACCCTGAGCAAGTACCAAGACTTCGACCCCGAGGTGAAACTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 72 bp | CATAGTTCTCCTCTCCCACCGCCTCCTCGCAGTAGTTaGGGTTGCAGTATTCAAAGTCGCCAGGCTGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HSSPLPPPPRSS*GCSIQSRQAAP Trigger: CGGGGCAGCCTGGCGACTTTGAATACTGCAACCTCAACTACTGCGAGGAGGCGGTGGGAGAGGAGAACTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | GTCAGTAATTCGAATCCGGGTGGAGGCCTTGCACACTaGCCGCTCTACAATGGGCAGGTTCACCACCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSNSNPGGGLAH*PLYNGQVHHLQ Trigger: CTGCAGGTGGTGAACCTGCCCATTGTAGAGCGGCCAGTGTGCAAGGCCTCCACCCGGATTCGAATTACTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | ACAATGGGCAGGTTCACCACCTGCAGGACGCTGGGCTGTATCTCATaGATGTTGGTTGTCCATGTCTCCCGAAGGTTGCCCCAGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TMGRFTTCRTLGCIS*MLVVHVSRRLPQPV Trigger: GACAGGCTGGGGCAACCTTCGGGAGACATGGACAACCAACATCAATGAGATACAGCCCAGCGTCCTGCAGGTGGTGAACCTGCCCATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | CCAGCACAGAACATGTTGTCAGTAATTCGAATCCGGGTGGAGGCCTaGCACACTGGCCGCTCTACAATGGGCAGGTTCACCACCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PAQNMLSVIRIRVEA*HTGRSTMGRFTTCR Trigger: CCTGCAGGTGGTGAACCTGCCCATTGTAGAGCGGCCAGTGTGCAAGGCCTCCACCCGGATTCGAATTACTGACAACATGTTCTGTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 72 bp | GGTTCACCACCTGCAGGACGCTGGGCTGTATCTCATTaGTGTTGGTTGTCCATGTCTCCCGAAGGTTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSPPAGRWAVSH*CWLSMSPEGCP Trigger: GGGGCAACCTTCGGGAGACATGGACAACCAACATCAATGAGATACAGCCCAGCGTCCTGCAGGTGGTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 72 bp | GGGCGATACCCTTCTCAGCGTCCCAGCCCTCCACGATaGGCCCGTCTATGTAAGAGTCAAGAAGCTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GRYPSQRPSPPR*ARLCKSQEAPF Trigger: AAAAGGAGCTTCTTGACTCTTACATAGACGGGCGCATCGTGGAGGGCTGGGACGCTGAGAAGGGTATCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | CTGTCACCCGCCCTTTATAACCAGCCCGGAGCAAGCTaGTTACTGTCTGCTTGTCTGGCAAACACACGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSPALYNQPGAS*LLSACLANTRG Trigger: ACCCCGTGTGTTTGCCAGACAAGCAGACAGTAACCAGCTTGCTCCGGGCTGGTTATAAAGGGCGGGTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | GAATGCTTGCCAATGCGCACCAGGAGGTCATTCTCAGTGAAGTTCTaGTCCCAGGGTGGGTACAGAATGCAGTGGGCAGCAGTGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: ECLPMRTRRSFSVKF*SQGGYRMQWAAVRT Trigger: GGTCCTCACTGCTGCCCACTGCATTCTGTACCCACCCTGGGACAAGAACTTCACTGAGAATGACCTCCTGGTGCGCATTGGCAAGCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 72 bp | CGACTTCTTCTCGAACAAAGGCCGCAGGCCACAGTCTaGCTCCCCAAGGCCGAAGGTCTTCTCATTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLLLEQRPQATV*LPKAEGLLIEE Trigger: TTCTTCAATGAGAAGACCTTCGGCCTTGGGGAGGCAGACTGTGGCCTGCGGCCTTTGTTCGAGAAGAAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 72 bp | CACACTGGCCGCTCTACAATGGGCAGGTTCACCACCTaGAGGACGCTGGGCTGTATCTCATTGATGTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HTGRSTMGRFTT*RTLGCISLMLV Trigger: AACCAACATCAATGAGATACAGCCCAGCGTCCTGCAGGTGGTGAACCTGCCCATTGTAGAGCGGCCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | CCAATGCGCACCAGGAGGTCATTCTCAGTGAAGTTCTaGTCCCAGGGTGGGTACAGAATGCAGTGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PMRTRRSFSVKF*SQGGYRMQWAA Trigger: TGCTGCCCACTGCATTCTGTACCCACCCTGGGACAAGAACTTCACTGAGAATGACCTCCTGGTGCGCATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | AGGTTCACCACCTGCAGGACGCTGGGCTGTATCTCATaGATGTTGGTTGTCCATGTCTCCCGAAGGTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RFTTCRTLGCIS*MLVVHVSRRLP Trigger: GGGCAACCTTCGGGAGACATGGACAACCAACATCAATGAGATACAGCCCAGCGTCCTGCAGGTGGTGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | TCTCCTCGCTTGGTGTCATTCACCTTGAAGCCAGCACAGAACATGTaGTCAGTAATTCGAATCCGGGTGGAGGCCTTGCACACTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRLVSFTLKPAQNM*SVIRIRVEALHTGR Trigger: GCGGCCAGTGTGCAAGGCCTCCACCCGGATTCGAATTACTGACAACATGTTCTGTGCTGGCTTCAAGGTGAATGACACCAAGCGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | ACCAGCCCGGAGCAAGCTGGTTACTGTCTGCTTGTCTaGCAAACACACGGGGTGAATATAGTCACTGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSPEQAGYCLLV*QTHGVNIVTEG Trigger: CCCTTCAGTGACTATATTCACCCCGTGTGTTTGCCAGACAAGCAGACAGTAACCAGCTTGCTCCGGGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | AACATGTTGTCAGTAATTCGAATCCGGGTGGAGGCCTaGCACACTGGCCGCTCTACAATGGGCAGGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: NMLSVIRIRVEA*HTGRSTMGRFT Trigger: GGTGAACCTGCCCATTGTAGAGCGGCCAGTGTGCAAGGCCTCCACCCGGATTCGAATTACTGACAACATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | CTCGAGGTTTCCTCACTGAATCACACACTGTGTACTTaGCCCAGAACACGTCTGTGTCTTGGGGAGACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LEVSSLNHTLCT*PRTRLCLGETP Trigger: TGGAGTCTCCCCAAGACACAGACGTGTTCTGGGCCAAGTACACAGTGTGTGATTCAGTGAGGAAACCTCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | TCTCGAGGTTTCCTCACTGAATCACACACTGTGTACTaGGCCCAGAACACGTCTGTGTCTTGGGGAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGFLTESHTVY*AQNTSVSWGDS Trigger: GGAGTCTCCCCAAGACACAGACGTGTTCTGGGCCAAGTACACAGTGTGTGATTCAGTGAGGAAACCTCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | ATGAAAGTCTCTCGAGGTTTCCTCACTGAATCACACACTGTGTACTaGGCCCAGAACACGTCTGTGTCTTGGGGAGACTCCAGGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: MKVSRGFLTESHTVY*AQNTSVSWGDSRAS Trigger: TGAGGCCCTGGAGTCTCCCCAAGACACAGACGTGTTCTGGGCCAAGTACACAGTGTGTGATTCAGTGAGGAAACCTCGAGAGACTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | CCACGATGCGCCCGTCTATGTAAGAGTCAAGAAGCTCCTTTTCGGTaGTGTCTTTCAACGACTTCTTCTCGAACAAAGGCCGCAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRCARLCKSQEAPFR*CLSTTSSRTKAAGH Trigger: GTGGCCTGCGGCCTTTGTTCGAGAAGAAGTCGTTGAAAGACACAACCGAAAAGGAGCTTCTTGACTCTTACATAGACGGGCGCATCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 72 bp | AATGCTTGCCAATGCGCACCAGGAGGTCATTCTCAGTaGAGTTCTTGTCCCAGGGTGGGTACAGAATGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NACQCAPGGHSQ*SSCPRVGTECS Trigger: ACTGCATTCTGTACCCACCCTGGGACAAGAACTTCACTGAGAATGACCTCCTGGTGCGCATTGGCAAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | AAGTTTTCCACGAGTTTCACCTCGGGGTCGAAGTCTTaGTACTTGCTCAGGGTCTTGGCTGGTAAGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KFSTSFTSGSKS*YLLRVLAGKLF Trigger: GAACAGCTTACCAGCCAAGACCCTGAGCAAGTACCAAGACTTCGACCCCGAGGTGAAACTCGTGGAAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CCA 72 bp | CCAGCATGGAGATCTTTTCAACATTCCGCTCATATCTaGTTCGGGAATGCTTGCCAATGCGCACCAGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PAWRSFQHSAHI*FGNACQCAPGG Trigger: ACCTCCTGGTGCGCATTGGCAAGCATTCCCGAACCAGATATGAGCGGAATGTTGAAAAGATCTCCATGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 72 bp | CAGACAGTCCATGAAAGTCTCTCGAGGTTTCCTCACTaGATCACACACTGTGTACTTGGCCCAGAACACGTC | + |
|
Preference number: 6 (lower is better) Translates to: QTVHESLSRFPH*ITHCVLGPEHV Trigger: GACGTGTTCTGGGCCAAGTACACAGTGTGTGATTCAGTGAGGAAACCTCGAGAGACTTTCATGGACTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | TTGGTGTCATTCACCTTGAAGCCAGCACAGAACATGTaGTCAGTAATTCGAATCCGGGTGGAGGCCTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVSFTLKPAQNM*SVIRIRVEALH Trigger: GTGCAAGGCCTCCACCCGGATTCGAATTACTGACAACATGTTCTGTGCTGGCTTCAAGGTGAATGACACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS TCA 72 bp | GCCGTATTTCCCCTTCCGGTCACATCCTTCACCCCATaGGACAATACCCATTTGATACCAGCGGTTGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: AVFPLPVTSFTP*DNTHLIPAVVK Trigger: TTTAACAACCGCTGGTATCAAATGGGTATTGTCTCATGGGGTGAAGGATGTGACCGGAAGGGGAAATACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS GCA 72 bp | ATCTTTTCAACATTCCGCTCATATCTGGTTCGGGAATaGTTGCCAATGCGCACCAGGAGGTCATTCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: IFSTFRSYLVRE*LPMRTRRSFSV Trigger: CACTGAGAATGACCTCCTGGTGCGCATTGGCAAGCATTCCCGAACCAGATATGAGCGGAATGTTGAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | TTTTCAACATTCCGCTCATATCTGGTTCGGGAATGCTaGCCAATGCGCACCAGGAGGTCATTCTCAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FSTFRSYLVREC*PMRTRRSFSVK Trigger: CTTCACTGAGAATGACCTCCTGGTGCGCATTGGCAAGCATTCCCGAACCAGATATGAGCGGAATGTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 90 bp | ATGGAGATCTTTTCAACATTCCGCTCATATCTGGTTCGGGAATGCTaGCCAATGCGCACCAGGAGGTCATTCTCAGTGAAGTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MEIFSTFRSYLVREC*PMRTRRSFSVKFLS Trigger: GGACAAGAACTTCACTGAGAATGACCTCCTGGTGCGCATTGGCAAGCATTCCCGAACCAGATATGAGCGGAATGTTGAAAAGATCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||
| CDS CAA 72 bp | GCCCGTCTATGTAAGAGTCAAGAAGCTCCTTTTCGGTaGTGTCTTTCAACGACTTCTTCTCGAACAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARLCKSQEAPFR*CLSTTSSRTKA Trigger: GGCCTTTGTTCGAGAAGAAGTCGTTGAAAGACACAACCGAAAAGGAGCTTCTTGACTCTTACATAGACGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028681.15 ENSMUST00000111335.2 |
||