Pregenerated sensors for F13B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026368Ensembl transcript IDs: ENSMUST00000027615.7
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGAGACCAGCCATTAGCCTaGCACTCTGCTTCCCCAGTC | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARDQPLA*HSASPV Trigger: GACTGGGGAAGCAGAGTGCCAGGCTAATGGCTGGTC...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR GCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATATCAACGGAGGGTGGTTaGTCGCAGGCTACCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFISTEGG*SQATFS Trigger: GGAGAAGGTAGCCTGCGAGCAACCACCCTCCGTTGA...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGAGTAGCACCTTGGGTTTaGAGACCAGCCTTCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARVAPWV*RPAFCC Trigger: ACAGCAGAAGGCTGGTCTCCAAACCCAAGGTGCTAC...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR GCA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTGGAGACCAGCCTTCTaGTGTGCACCTGATTTGCTC | + |
Preference number: 4 (lower is better) Translates to: YAKVKAQNTELSGVFLKLWRPAF*CAPDLL Trigger: GAGCAAATCAGGTGCACAGCAGAAGGCTGGTCTCCA...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGCTTCTGCTGTGCACCTaGTTTGCTCTTCTTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: YAKVKAQNTELSGVFLKLLLLCT*FALLAS Trigger: GGAAGCAAGAAGAGCAAATCAGGTGCACAGCAGAAG...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR GCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATCTCTTGTTCTTTCCTaGAGGACGGTTGAGAAGACC | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARSLVLS*RTVEKT Trigger: GGTCTTCTCAACCGTCCTGCAGGAAAGAACAAGAGA...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATAATTCTCAACGGAGGGTaGTTGCTCGCAGGCTACCTT | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFIILNGG*LLAGYL Trigger: AAGGTAGCCTGCGAGCAACCACCCTCCGTTGAGAAT...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGAAGTGGTTTTGTATCCTaGAGAGCAACCGTAGCTCAT | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARSGFVS*RATVAH Trigger: ATGAGCTACGGTTGCTCTTCAGGATACAAAACCACT...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR GCA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGGCTGTGCACCTGATTTaGTCTTCTTGCTTCCCACTT | + |
Preference number: 4 (lower is better) Translates to: YAKVKAQNTELSGVFLKLAVHLI*SSCFPL Trigger: AAGTGGGAAGCAAGAAGAGCAAATCAGGTGCACAGC...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR GCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATACTCAGAGTGTGGGTGTaGAACACCATTCTCAACGGA | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFILRVWV*NTILNG Trigger: TCCGTTGAGAATGGTGTTGCACACCCACACTCTGAG...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGAGTAAATCTCAGAGTGTaGGTGTGCAACACCATTCTC | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARVNLRV*VCNTIL Trigger: GAGAATGGTGTTGCACACCCACACTCTGAGATTTAC...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATACTATGTCCTTCACTTTaGATGTTCTCTGCGTCGTGG | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFILCPSL*MFSASW Trigger: CCACGACGCAGAGAACATTCAAAGTGAAGGACATAG...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATAGCAAGTTATCGTACTTaGTCCTCTGAGACTGTAGCC | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFIASYRT*SSETVA Trigger: GGCTACAGTCTCAGAGGATCAAGTACGATAACTTGC...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATAACACCGGTATTCTACTaGGGAGCCGTTTTCATAGGT | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFITPVFY*GAVFIG Trigger: ACCTATGAAAACGGCTCCTCAGTAGAATACCGGTGT...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATATTTCTTGTAGCACCTTaGGTTTGGAGACCAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFIFLVAP*VWRPAF Trigger: GAAGGCTGGTCTCCAAACCCAAGGTGCTACAAGAAA...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCTTCCTTCACATATaGGAGATTCTGGATACCAGC | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARFFLHI*EILDTS Trigger: GCTGGTATCCAGAATCTCCCATATGTGAAGGAAGAA...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTCCATTTCTTATCACTaGAGGAGATGCACACATCCC | + |
Preference number: 4 (lower is better) Translates to: YAKVKAQNTELSGVFLKLSISYH*RRCTHP Trigger: GGGATGTGTGCATCTCCTCCAGTGATAAGAAATGGA...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGAACAGAGCAGTTCTTCTaGACCCTGAATCACAAAATT | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARTEQFF*TLNHKI Trigger: AATTTTGTGATTCAGGGTTCAGAAGAACTGCTCTGT...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATAATAGGTGCGGGCTGCTaGACTAACAATATCTCCATT | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFIIGAGC*TNNISI Trigger: AATGGAGATATTGTTAGTTCAGCAGCCCGCACCTAT...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR GCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATACTGATTTGCTCTTCTTaGTTCCCACTTTCGGTTGCA | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFILICSS*FPLSVA Trigger: TGCAACCGAAAGTGGGAAGCAAGAAGAGCAAATCAG...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTCCTCAATACATTTTaGAGGTTCTGTCCACTTCCC | + |
Preference number: 4 (lower is better) Translates to: YAKVKAQNTELSGVFLKLFLNTF*RFCPLP Trigger: GGGAAGTGGACAGAACCTCCAAAATGTATTGAGGAA...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGGACCCTTGTAGGAAATaGTTATCAAAACACCGGTAT | + |
Preference number: 4 (lower is better) Translates to: YAKVKAQNTELSGVFLKLDPCRK*LSKHRY Trigger: ATACCGGTGTTTTGATAATCATTTCCTACAAGGGTC...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGAACTCTCCATGTAAAATaGGTGGTCTGTTGTCAAAAT | + |
Preference number: 4 (lower is better) Translates to: KAQNTELSGVFLKLFYARTLHVK*VVCCQN Trigger: ATTTTGACAACAGACCACTCATTTTACATGGAGAGT...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR GCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATATATCACTGGAGGAGATaGACACATCCCTTTAGATTC | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFIYHWRR*THPFRF Trigger: GAATCTAAAGGGATGTGTGCATCTCCTCCAGTGATA...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR TCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATAGTGACGGTAAGTTGTTaGATGTGGTTGAATTTTAGA | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFIVTVSC*MWLNFR Trigger: TCTAAAATTCAACCACATTCAACAACTTACCGTCAC...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CCA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATAACATATGGGAGATTCTaGATACCAGCCAAAGTTATA | + |
Preference number: 4 (lower is better) Translates to: QNTELSGVFLKLFYARFITYGRF*IPAKVI Trigger: TATAACTTTGGCTGGTATCCAGAATCTCCCATATGT...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 90 bp | TTTGTTGCACTGTGGTGTGAGGGACCAGCCATTAGCCTGGCACTCTaGTTCCCCAGTCTGCTTCCCTGTAGTGGTGTAGTAGCCTGCAGT | + |
Preference number: 5 (lower is better) Translates to: FVALWCEGPAISLAL*FPSLLPCSGVVACS Trigger: ACTGCAGGCTACTACACCACTACAGGGAAGCAGACTGGGGAAGCAGAGTGCCAGGCTAATGGCTGGTCCCTCACACCACAGTGCAACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 90 bp | AACTCAGGGGCCAAACATGTCTCTTGTTCTTTCCTGCAGGACGGTTaGGAAGACCACCCTGCAGAAAGACAGTGGACCACCTCCTCGTCC | + |
Preference number: 5 (lower is better) Translates to: NSGAKHVSCSFLQDG*EDHPAERQWTTSSS Trigger: GGACGAGGAGGTGGTCCACTGTCTTTCTGCAGGGTGGTCTTCTCAACCGTCCTGCAGGAAAGAACAAGAGACATGTTTGGCCCCTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 90 bp | ACATGTCTCTTGTTCTTTCCTGCAGGACGGTTGAGAAGACCACCCTaGAGAAAGACAGTGGACCACCTCCTCGTCCTTTCCCCCAGTGGT | + |
Preference number: 5 (lower is better) Translates to: TCLLFFPAGRLRRPP*RKTVDHLLVLSPSG Trigger: ACCACTGGGGGAAAGGACGAGGAGGTGGTCCACTGTCTTTCTGCAGGGTGGTCTTCTCAACCGTCCTGCAGGAAAGAACAAGAGACATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 90 bp | CTCAGGGGGCAGTGTCCATCGGCCACGATTGCAAGTTATCGTACTTaGTCCTCTGAGACTGTAGCCCCCTCCACACCTGTATGTCACTTT | + |
Preference number: 5 (lower is better) Translates to: LRGQCPSATIASYRT*SSETVAPSTPVCHF Trigger: AAAGTGACATACAGGTGTGGAGGGGGCTACAGTCTCAGAGGATCAAGTACGATAACTTGCAATCGTGGCCGATGGACACTGCCCCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 90 bp | TCTTGTAGCACCTTGGGTTTGGAGACCAGCCTTCTGCTGTGCACCTaGTTTGCTCTTCTTGCTTCCCACTTTCGGTTGCATAGCCAGCCA | + |
Preference number: 5 (lower is better) Translates to: SCSTLGLETSLLLCT*FALLASHFRLHSQP Trigger: TGGCTGGCTATGCAACCGAAAGTGGGAAGCAAGAAGAGCAAATCAGGTGCACAGCAGAAGGCTGGTCTCCAAACCCAAGGTGCTACAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 90 bp | GCAGTGTCCATCGGCCACGATTGCAAGTTATCGTACTTGATCCTCTaGGACTGTAGCCCCCTCCACACCTGTATGTCACTTTATCCCCAC | + |
Preference number: 5 (lower is better) Translates to: AVSIGHDCKLSYLIL*DCSPLHTCMSLYPH Trigger: GTGGGGATAAAGTGACATACAGGTGTGGAGGGGGCTACAGTCTCAGAGGATCAAGTACGATAACTTGCAATCGTGGCCGATGGACACTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CCA 90 bp | ACCCTGCAGAAAGACAGTGGACCACCTCCTCGTCCTTTCCCCCAGTaGTTTTGTATCCTGAAGAGCAACCGTAGCTCATCCTCTCTTGAA | + |
Preference number: 5 (lower is better) Translates to: TLQKDSGPPPRPFPQ*FCILKSNRSSSSLE Trigger: TTCAAGAGAGGATGAGCTACGGTTGCTCTTCAGGATACAAAACCACTGGGGGAAAGGACGAGGAGGTGGTCCACTGTCTTTCTGCAGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 90 bp | TTCCATGTTCCAACTCAGGGGCCAAACATGTCTCTTGTTCTTTCCTaGAGGACGGTTGAGAAGACCACCCTGCAGAAAGACAGTGGACCA | + |
Preference number: 5 (lower is better) Translates to: FHVPTQGPNMSLVLS*RTVEKTTLQKDSGP Trigger: TGGTCCACTGTCTTTCTGCAGGGTGGTCTTCTCAACCGTCCTGCAGGAAAGAACAAGAGACATGTTTGGCCCCTGAGTTGGAACATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 90 bp | ACAGTGGACCACCTCCTCGTCCTTTCCCCCAGTGGTTTTGTATCCTaGAGAGCAACCGTAGCTCATCCTCTCTTGAAGTTTGTACAGTAC | + |
Preference number: 5 (lower is better) Translates to: TVDHLLVLSPSGFVS*RATVAHPLLKFVQY Trigger: GTACTGTACAAACTTCAAGAGAGGATGAGCTACGGTTGCTCTTCAGGATACAAAACCACTGGGGGAAAGGACGAGGAGGTGGTCCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 90 bp | GCACTCTGCTTCCCCAGTCTGCTTCCCTGTAGTGGTGTAGTAGCCTaGAGTGCATGTGTAAGCCACTATGTCCTTCACTTTGAATGTTCT | + |
Preference number: 5 (lower is better) Translates to: ALCFPSLLPCSGVVA*SACVSHYVLHFECS Trigger: AGAACATTCAAAGTGAAGGACATAGTGGCTTACACATGCACTGCAGGCTACTACACCACTACAGGGAAGCAGACTGGGGAAGCAGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 90 bp | ATCTCAGAGTGTGGGTGTGCAACACCATTCTCAACGGAGGGTGGTTaGTCGCAGGCTACCTTCTCCTTTTCCTCAATACATTTTGGAGGT | + |
Preference number: 5 (lower is better) Translates to: ISECGCATPFSTEGG*SQATFSFSSIHFGG Trigger: ACCTCCAAAATGTATTGAGGAAAAGGAGAAGGTAGCCTGCGAGCAACCACCCTCCGTTGAGAATGGTGTTGCACACCCACACTCTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CCA 90 bp | GTAAATCTCAGAGTGTGGGTGTGCAACACCATTCTCAACGGAGGGTaGTTGCTCGCAGGCTACCTTCTCCTTTTCCTCAATACATTTTGG | + |
Preference number: 5 (lower is better) Translates to: VNLRVWVCNTILNGG*LLAGYLLLFLNTFW Trigger: CCAAAATGTATTGAGGAAAAGGAGAAGGTAGCCTGCGAGCAACCACCCTCCGTTGAGAATGGTGTTGCACACCCACACTCTGAGATTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 90 bp | TGTAGTAGCCTGCAGTGCATGTGTAAGCCACTATGTCCTTCACTTTaGATGTTCTCTGCGTCGTGGAGTAATTTCCATGTTCCAACTCAG | + |
Preference number: 5 (lower is better) Translates to: CSSLQCMCKPLCPSL*MFSASWSNFHVPTQ Trigger: CTGAGTTGGAACATGGAAATTACTCCACGACGCAGAGAACATTCAAAGTGAAGGACATAGTGGCTTACACATGCACTGCAGGCTACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | CAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTCATACTCAACGGAGGGTGGTaGCTCGCAGGCTACCTTCTC | + |
Preference number: 5 (lower is better) Translates to: QNTELSGVFLKLFYARFILNGGW*LAGYLL Trigger: GAGAAGGTAGCCTGCGAGCAACCACCCTCCGTTGAG...TATGAATCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTGTAGCACCTTGGGTTaGGAGACCAGCCTTCTGCTG | + |
Preference number: 5 (lower is better) Translates to: YAKVKAQNTELSGVFLKLCSTLG*ETSLLL Trigger: CAGCAGAAGGCTGGTCTCCAAACCCAAGGTGCTACA...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CCA 90 bp | AACCGTAGCTCATCCTCTCTTGAAGTTTGTACAGTACTTTGTCATTaGAGACGTAGCCATTCCTTAGGTCAGGCTTCAGACATTTCTTGT | + |
Preference number: 5 (lower is better) Translates to: NRSSSSLEVCTVLCH*RRSHSLGQASDISC Trigger: ACAAGAAATGTCTGAAGCCTGACCTAAGGAATGGCTACGTCTCCAATGACAAAGTACTGTACAAACTTCAAGAGAGGATGAGCTACGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATGCTGTGCACCTGATTaGCTCTTCTTGCTTCCCACT | + |
Preference number: 5 (lower is better) Translates to: KAQNTELSGVFLKLFYARCCAPD*LFLLPT Trigger: AGTGGGAAGCAAGAAGAGCAAATCAGGTGCACAGCA...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGGGCCAAACATGTCTCTaGTTCTTTCCTGCAGGACGG | + |
Preference number: 5 (lower is better) Translates to: YAKVKAQNTELSGVFLKLGQTCL*FFPAGR Trigger: CCGTCCTGCAGGAAAGAACAAGAGACATGTTTGGCC...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGCAACAACCACACCGTTaGCTATGTCAGGAGGAGGCT | + |
Preference number: 5 (lower is better) Translates to: YAKVKAQNTELSGVFLKLQQPHR*LCQEEA Trigger: AGCCTCCTCCTGACATAGCAAACGGTGTGGTTGTTG...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 90 bp | GCAGATATCTCCGACAGTGGGATTGATGGTGACAAGTTATATCCCTaGTTACACACAAAATCTATTAGGTCTCCATGTAAAATCTTGCCC | + |
Preference number: 5 (lower is better) Translates to: ADISDSGIDGDKLYP*LHTKSIRSPCKILP Trigger: GGGCAAGATTTTACATGGAGACCTAATAGATTTTGTGTGTAAGCAGGGATATAACTTGTCACCATCAATCCCACTGTCGGAGATATCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGCCTGATTTGCTCTTCTaGCTTCCCACTTTCGGTTGC | + |
Preference number: 5 (lower is better) Translates to: YAKVKAQNTELSGVFLKLPDLLF*LPTFGC Trigger: GCAACCGAAAGTGGGAAGCAAGAAGAGCAAATCAGG...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGAGAGCACATTAATTTGTaGCACTGTGGTGTGAGGGAC | + |
Preference number: 5 (lower is better) Translates to: KAQNTELSGVFLKLFYAREHINL*HCGVRD Trigger: GTCCCTCACACCACAGTGCAACAAATTAATGTGCTC...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGATTTCTTGTAGCACCTaGGGTTTGGAGACCAGCCTT | + |
Preference number: 5 (lower is better) Translates to: YAKVKAQNTELSGVFLKLISCST*GLETSL Trigger: AAGGCTGGTCTCCAAACCCAAGGTGCTACAAGAAAT...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGACTATGTCCTTCACTTaGAATGTTCTCTGCGTCGTG | + |
Preference number: 5 (lower is better) Translates to: YAKVKAQNTELSGVFLKLTMSFT*NVLCVV Trigger: CACGACGCAGAGAACATTCAAAGTGAAGGACATAGT...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | AAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGTTTTATGCGAGATTTCCTCAATACATTTaGGAGGTTCTGTCCACTTCC | + |
Preference number: 5 (lower is better) Translates to: KAQNTELSGVFLKLFYARFPQYI*EVLSTS Trigger: GGAAGTGGACAGAACCTCCAAAATGTATTGAGGAAA...TCTCGCATAAAACAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS-3UTR CAA 90 bp | TATGCAAAAGTAAAGGCTCAGAACACTGAACTTAGTGGAGTCTTCCTAAAATTGGTAGCTCATCCTCTCTaGAAGTTTGTACAGTACTTT | + |
Preference number: 5 (lower is better) Translates to: YAKVKAQNTELSGVFLKLVAHPL*KFVQYF Trigger: AAAGTACTGTACAAACTTCAAGAGAGGATGAGCTAC...CAATTTTAGGAAGACTCCACTAAGTTCAGTGTTCTGAGCCTTTACTTTTGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | CTGTGGTGTGAGGGACCAGCCATTAGCCTGGCACTCTaGTTCCCCAGTCTGCTTCCCTGTAGTGGTGTAGTA | + |
Preference number: 6 (lower is better) Translates to: LWCEGPAISLAL*FPSLLPCSGVV Trigger: TACTACACCACTACAGGGAAGCAGACTGGGGAAGCAGAGTGCCAGGCTAATGGCTGGTCCCTCACACCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CCA 72 bp | TTGTTGCACTGTGGTGTGAGGGACCAGCCATTAGCCTaGCACTCTGCTTCCCCAGTCTGCTTCCCTGTAGTG | + |
Preference number: 6 (lower is better) Translates to: LLHCGVRDQPLA*HSASPVCFPVV Trigger: CACTACAGGGAAGCAGACTGGGGAAGCAGAGTGCCAGGCTAATGGCTGGTCCCTCACACCACAGTGCAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 90 bp | CAACTCAGGGGCCAAACATGTCTCTTGTTCTTTCCTGCAGGACGGTaGAGAAGACCACCCTGCAGAAAGACAGTGGACCACCTCCTCGTC | + |
Preference number: 6 (lower is better) Translates to: QLRGQTCLLFFPAGR*RRPPCRKTVDHLLV Trigger: GACGAGGAGGTGGTCCACTGTCTTTCTGCAGGGTGGTCTTCTCAACCGTCCTGCAGGAAAGAACAAGAGACATGTTTGGCCCCTGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | TTGTTCTTTCCTGCAGGACGGTTGAGAAGACCACCCTaGAGAAAGACAGTGGACCACCTCCTCGTCCTTTCC | + |
Preference number: 6 (lower is better) Translates to: LFFPAGRLRRPP*RKTVDHLLVLS Trigger: GGAAAGGACGAGGAGGTGGTCCACTGTCTTTCTGCAGGGTGGTCTTCTCAACCGTCCTGCAGGAAAGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 72 bp | GCCAAACATGTCTCTTGTTCTTTCCTGCAGGACGGTTaGGAAGACCACCCTGCAGAAAGACAGTGGACCACC | + |
Preference number: 6 (lower is better) Translates to: AKHVSCSFLQDG*EDHPAERQWTT Trigger: GGTGGTCCACTGTCTTTCTGCAGGGTGGTCTTCTCAACCGTCCTGCAGGAAAGAACAAGAGACATGTTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 72 bp | ATCAATAGTGCAGGGCTCCAAGCAGACAGGTGGAGATaGCCACGCTCCTTGTTCACAGCGAGATGTTTCCGA | + |
Preference number: 6 (lower is better) Translates to: INSAGLQADRWR*PRSLFTARCFR Trigger: TCGGAAACATCTCGCTGTGAACAAGGAGCGTGGTCATCTCCACCTGTCTGCTTGGAGCCCTGCACTATTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | CCAACTCAGGGGCCAAACATGTCTCTTGTTCTTTCCTaGAGGACGGTTGAGAAGACCACCCTGCAGAAAGAC | + |
Preference number: 6 (lower is better) Translates to: PTQGPNMSLVLS*RTVEKTTLQKD Trigger: GTCTTTCTGCAGGGTGGTCTTCTCAACCGTCCTGCAGGAAAGAACAAGAGACATGTTTGGCCCCTGAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CCA 72 bp | AAAGACAGTGGACCACCTCCTCGTCCTTTCCCCCAGTaGTTTTGTATCCTGAAGAGCAACCGTAGCTCATCC | + |
Preference number: 6 (lower is better) Translates to: KDSGPPPRPFPQ*FCILKSNRSSS Trigger: GGATGAGCTACGGTTGCTCTTCAGGATACAAAACCACTGGGGGAAAGGACGAGGAGGTGGTCCACTGTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 72 bp | GTGTGGGTGTGCAACACCATTCTCAACGGAGGGTGGTaGCTCGCAGGCTACCTTCTCCTTTTCCTCAATACA | + |
Preference number: 6 (lower is better) Translates to: VWVCNTILNGGW*LAGYLLLFLNT Trigger: TGTATTGAGGAAAAGGAGAAGGTAGCCTGCGAGCAACCACCCTCCGTTGAGAATGGTGTTGCACACCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 72 bp | ACCTTGGGTTTGGAGACCAGCCTTCTGCTGTGCACCTaGTTTGCTCTTCTTGCTTCCCACTTTCGGTTGCAT | + |
Preference number: 6 (lower is better) Translates to: TLGLETSLLLCT*FALLASHFRLH Trigger: ATGCAACCGAAAGTGGGAAGCAAGAAGAGCAAATCAGGTGCACAGCAGAAGGCTGGTCTCCAAACCCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | TGTGGGTGTGCAACACCATTCTCAACGGAGGGTGGTTaGTCGCAGGCTACCTTCTCCTTTTCCTCAATACAT | + |
Preference number: 6 (lower is better) Translates to: CGCATPFSTEGG*SQATFSFSSIH Trigger: ATGTATTGAGGAAAAGGAGAAGGTAGCCTGCGAGCAACCACCCTCCGTTGAGAATGGTGTTGCACACCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 72 bp | AGACCAGCCTTCTGCTGTGCACCTGATTTGCTCTTCTaGCTTCCCACTTTCGGTTGCATAGCCAGCCAAACA | + |
Preference number: 6 (lower is better) Translates to: RPAFCCAPDLLF*LPTFGCIASQT Trigger: TGTTTGGCTGGCTATGCAACCGAAAGTGGGAAGCAAGAAGAGCAAATCAGGTGCACAGCAGAAGGCTGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 90 bp | AATCTCAGAGTGTGGGTGTGCAACACCATTCTCAACGGAGGGTGGTaGCTCGCAGGCTACCTTCTCCTTTTCCTCAATACATTTTGGAGG | + |
Preference number: 6 (lower is better) Translates to: NLRVWVCNTILNGGW*LAGYLLLFLNTFWR Trigger: CCTCCAAAATGTATTGAGGAAAAGGAGAAGGTAGCCTGCGAGCAACCACCCTCCGTTGAGAATGGTGTTGCACACCCACACTCTGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 72 bp | CACCTCCTCGTCCTTTCCCCCAGTGGTTTTGTATCCTaGAGAGCAACCGTAGCTCATCCTCTCTTGAAGTTT | + |
Preference number: 6 (lower is better) Translates to: HLLVLSPSGFVS*RATVAHPLLKF Trigger: AAACTTCAAGAGAGGATGAGCTACGGTTGCTCTTCAGGATACAAAACCACTGGGGGAAAGGACGAGGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | TTCCCCAGTCTGCTTCCCTGTAGTGGTGTAGTAGCCTaGAGTGCATGTGTAAGCCACTATGTCCTTCACTTT | + |
Preference number: 6 (lower is better) Translates to: FPSLLPCSGVVA*SACVSHYVLHF Trigger: AAAGTGAAGGACATAGTGGCTTACACATGCACTGCAGGCTACTACACCACTACAGGGAAGCAGACTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | TTTATCCCCACTGTAGTAAATCTCAGAGTGTGGGTGTaGAACACCATTCTCAACGGAGGGTGGTTGCTCGCA | + |
Preference number: 6 (lower is better) Translates to: FIPTVVNLRVWV*NTILNGGWLLA Trigger: TGCGAGCAACCACCCTCCGTTGAGAATGGTGTTGCACACCCACACTCTGAGATTTACTACAGTGGGGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | GTACACTTAGGGTATTTCAGCCTTCCCCTGTCACACTaGACCCGAAGTACAGACCCAGCAATAGATGTCTCA | + |
Preference number: 6 (lower is better) Translates to: VHLGYFSLPLSH*TRSTDPAIDVS Trigger: TGAGACATCTATTGCTGGGTCTGTACTTCGGGTGCAGTGTGACAGGGGAAGGCTGAAATACCCTAAGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS TCA 72 bp | CTGCAGTGCATGTGTAAGCCACTATGTCCTTCACTTTaGATGTTCTCTGCGTCGTGGAGTAATTTCCATGTT | + |
Preference number: 6 (lower is better) Translates to: LQCMCKPLCPSL*MFSASWSNFHV Trigger: AACATGGAAATTACTCCACGACGCAGAGAACATTCAAAGTGAAGGACATAGTGGCTTACACATGCACTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CCA 72 bp | TCATCCTCTCTTGAAGTTTGTACAGTACTTTGTCATTaGAGACGTAGCCATTCCTTAGGTCAGGCTTCAGAC | + |
Preference number: 6 (lower is better) Translates to: SSSLEVCTVLCH*RRSHSLGQASD Trigger: GTCTGAAGCCTGACCTAAGGAATGGCTACGTCTCCAATGACAAAGTACTGTACAAACTTCAAGAGAGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 90 bp | TCACATCGCCTCTATTGCACTGCGCAGATATCTCCGACAGTGGGATaGATGGTGACAAGTTATATCCCTGCTTACACACAAAATCTATTA | + |
Preference number: 6 (lower is better) Translates to: SHRLYCTAQISPTVG*MVTSYIPAYTQNLL Trigger: TAATAGATTTTGTGTGTAAGCAGGGATATAACTTGTCACCATCAATCCCACTGTCGGAGATATCTGCGCAGTGCAATAGAGGCGATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 72 bp | TGTAACTTGCCAGTAACCCATCAACAACCACACCGTTaGCTATGTCAGGAGGAGGCTTACAATTCTCAATAT | + |
Preference number: 6 (lower is better) Translates to: CNLPVTHQQPHR*LCQEEAYNSQY Trigger: ATATTGAGAATTGTAAGCCTCCTCCTGACATAGCAAACGGTGTGGTTGTTGATGGGTTACTGGCAAGTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 90 bp | ATCCTGTTGTGTAACTTGCCAGTAACCCATCAACAACCACACCGTTaGCTATGTCAGGAGGAGGCTTACAATTCTCAATATTTTCAACAC | + |
Preference number: 6 (lower is better) Translates to: ILLCNLPVTHQQPHR*LCQEEAYNSQYFQH Trigger: GTGTTGAAAATATTGAGAATTGTAAGCCTCCTCCTGACATAGCAAACGGTGTGGTTGTTGATGGGTTACTGGCAAGTTACACAACAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS CAA 72 bp | CCATTTTCTATTAATCTCAAAGAAGAGCACATTAATTaGTTGCACTGTGGTGTGAGGGACCAGCCATTAGCC | + |
Preference number: 6 (lower is better) Translates to: PFSINLKEEHIN*LHCGVRDQPLA Trigger: GGCTAATGGCTGGTCCCTCACACCACAGTGCAACAAATTAATGTGCTCTTCTTTGAGATTAATAGAAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |
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CDS GCA 72 bp | TCCGACAGTGGGATTGATGGTGACAAGTTATATCCCTaGTTACACACAAAATCTATTAGGTCTCCATGTAAA | + |
Preference number: 6 (lower is better) Translates to: SDSGIDGDKLYP*LHTKSIRSPCK Trigger: TTTACATGGAGACCTAATAGATTTTGTGTGTAAGCAGGGATATAACTTGTCACCATCAATCCCACTGTCGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027615.7 |