Pregenerated sensors for F12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021492Ensembl transcript IDs: ENSMUST00000021948.15, ENSMUST00000170921.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAATGCTGCAGGCCTGGCTaGCCACCGGCTTGCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RGTSFTVTQHATFIVPSQCCRPG*PPACSE Trigger: CTCACTGCAAGCCGGTGGCCAGCCAGGCCTGCAGCA...TTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGAGTGGGGCCGCGCCGCTaGGTAGACACACAGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PSMPHSSSHPKEHTRREGVGPRR*VDTQAE Trigger: TTCAGCCTGTGTGTCTACCCAGCGGCGCGGCCCCAC...TCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | TGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCGATTCTGCAGGCAGTaGGCCGCGGTCAGCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: CRGTSFTVTQHATFIVPSRFCRQ*AAVSTQ Trigger: TTGGGTGCTGACCGCGGCTCACTGCCTGCAGAATCG...GGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | CGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAAGACTCCGGGCTTGTTaGGGTCACCACAGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RGTSFTVTQHATFIVPSQRLRAC*GHHSRS Trigger: GCTCCGGCTGTGGTGACCGCAACAAGCCCGGAGTCT...TTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAATTGATGCTGCAGGCCTaGCTGGCCACCGGCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RGTSFTVTQHATFIVPSQLMLQA*LATGLQ Trigger: CTGCAAGCCGGTGGCCAGCCAGGCCTGCAGCATCAA...TTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCAGCCCCCTCGAACTGGTaGCCCCAGCCGGCCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: FQSTLLSFCAPSVGALASAPSNW*PQPATS Trigger: CGAGGTGGCCGGCTGGGGTCACCAGTTCGAGGGGGC...TGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAATCATGTTCCGGTAGGTaGCCTCCACGGTCCACCGCT | + |
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Preference number: 4 (lower is better) Translates to: RGTSFTVTQHATFIVPSQSCSGR*PPRSTA Trigger: AGCGGTGGACCGTGGAGGCCACCTACCGGAACATGA...TTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | CAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCACTGCCCAACAGGGGGCGATaGGACTGCCCGCGCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QSTLLSFCAPSVGALASLPNRGR*DCPRRS Trigger: ACTTCTGCGCGGGCAGTCTCATCGCCCCCTGTTGGG...CAGTGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAAGCCTGGCAACGGCACAGTGGGTaGTCCTCCACGAGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HIHRPIPRSTQGGKDKAWQRHSG*SSTRRQ Trigger: CTGCCTCCTCGTGGAGGACCACCCACTGTGCCGTTG...CCAGGCTTTATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | AGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACTGCATGGGACAGAGATaGTGCCTGGGACGGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: SFTVTQHATFIVPSQGAHCMGQR*CLGRGL Trigger: GAGTCCCCGTCCCAGGCACCATCTCTGTCCCATGCA...GTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | CGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAGGCAATGTTTCCCAGTaGGGTGTTCAGGGCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RGTSFTVTQHATFIVPSQGNVSQ*GVQGRD Trigger: GTCTCTGCCCTGAACACCTCACTGGGAAACATTGCC...TTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | TGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAAGCCGCCACCGGCTTGCAGTaGGCCTCAGAACCTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CHIHRPIPRSTQGGKDKAATGLQ*ASEPLH Trigger: GTGCAAAGGTTCTGAGGCTCACTGCAAGCCGGTGGC...GGCTTTATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | TGCCCCCAGTGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGGTGAGCTGATGTTCTaGAGTTCCTTCCTCACACAC | + |
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Preference number: 4 (lower is better) Translates to: CPQCRGTSFTVTQHATFIGELMF*SSFLTH Trigger: GTGTGTGAGGAAGGAACTGCAGAACATCAGCTCACC...GATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACACTGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | TGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCCTGGCCGCCTTTTGTaGATGCATTTGTGGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CRGTSFTVTQHATFIVPSPGRLL*MHLWCS Trigger: GCTACACCACAAATGCATCCACAAAAGGCGGCCAGG...GGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | TCAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCACTAGGGCAACGGCACAGTaGGTGGTCCTCCACGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SKHFIEFLCPQCRGTSFTRATAQ*VVLHEE Trigger: CTCCTCGTGGAGGACCACCCACTGTGCCGTTGCCCT...AGTGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | TGCCCCCAGTGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCCCAGACGAAGCACCATaGACGTGTGTCATTATCTGG | + |
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Preference number: 4 (lower is better) Translates to: CPQCRGTSFTVTQHATFIPDEAP*TCVIIW Trigger: CCAGATAATGACACACGTCCATGGTGCTTCGTCTGG...GATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACACTGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | TGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCGCCGCCTTTTGTGGATaGATTTGTGGTGTAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: CRGTSFTVTQHATFIVPSAAFCG*ICGVAD Trigger: GTCAGCTACACCACAAATGCATCCACAAAAGGCGGC...GGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | AGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACGGTCGAGTCATTTGGTaGATGGGACAGAGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SFTVTQHATFIVPSQGAHGRVIW*MGQRWC Trigger: GCACCATCTCTGTCCCATGCACCAAATGACTCGACC...GTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | CACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAAGCCTGGGTTACCCCAGTACAGTaGAGCGATGTAGGGGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: HIHRPIPRSTQGGKDKAWVTPVQ*SDVGVR Trigger: TCGCACCCCTACATCGCTGCACTGTACTGGGGTAAC...CCAGGCTTTATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | AGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACCGCAGCCCATCGTGTTaGTCTTGGACAGAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFTVTQHATFIVPSQGAHRSPSC*SWTEKS Trigger: AGACTTCTCTGTCCAAGACCAACACGATGGGCTGCG...GTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | AGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACTCCAAGCCAGGTAGTTaGCCACGTCTGTGTAGACTC | + |
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Preference number: 4 (lower is better) Translates to: SFTVTQHATFIVPSQGAHSKPGS*PRLCRL Trigger: GAGTCTACACAGACGTGGCCAACTACCTGGCTTGGA...GTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCACCGCGCAGGGTGAGCTaGTGTTCTGCAGTTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FQSTLLSFCAPSVGALASPRRVS*CSAVPS Trigger: GGAAGGAACTGCAGAACATCAGCTCACCCTGCGCGG...TGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | CCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATGTGGGCCCATCAGGTaGGTCCTTAAATTTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: PSMPHSSSHPKEHTRREGCGPIR*VLKFLG Trigger: TCCAAGAAATTTAAGGACGCACCTGATGGGCCCACA...TCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | TGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAAGCCTTGGTTTTGCTTTCCTaGAGGCGCAGCAGAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: CHIHRPIPRSTQGGKDKALVLLS*RRSRAK Trigger: CTTGGCTCTGCTGCGCCTGCAGGAAAGCAAAACCAA...GGCTTTATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCACTGCCTCCTGCAGGAAGGTaGAGTATTCTTCAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QSTLLSFCAPSVGALASLPPAGR*SILQPP Trigger: AGGGGGCTGAAGAATACTCCACCTTCCTGCAGGAGG...CAGTGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | CAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCACTGGATAAAGGGAACCTGTaGCTCCTGCAGGAAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QSTLLSFCAPSVGALASLDKGNL*LLQEGG Trigger: TCCACCTTCCTGCAGGAGGCACAGGTTCCCTTTATC...CAGTGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAAGCCTGGGGTCTTTCACTTTCTTaGGCTCCAAGCAGTATCCCC | + |
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Preference number: 4 (lower is better) Translates to: HIHRPIPRSTQGGKDKAWGLSLS*APSSIP Trigger: GGGGATACTGCTTGGAGCCCAAGAAAGTGAAAGACC...CCAGGCTTTATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | CCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGAAAGAACTTGAGAAGCTaGGGCTCAAAGCATTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSMPHSSSHPKEHTRREGKNLRS*GSKHFS Trigger: AGAGAAATGCTTTGAGCCTCAGCTTCTCAAGTTCTT...TCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | ACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAAGCCTGGTTCTCGTGGAAGAACTTaGGAAGCTGAGGCTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TFIVPSQGAHKEGRIKPGSRGRT*EAEAQS Trigger: GCTTTGAGCCTCAGCTTCTCAAGTTCTTCCACGAGA...ACCAGGCTTTATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | CAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCACTGTGGTTGTGGCGATCTTaGCCAAGTACCACTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QSTLLSFCAPSVGALASLWLWRS*PSTTVS Trigger: ACTGACAGTGGTACTTGGTCAAGATCGCCACAACCA...CAGTGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR TCA 90 bp | ACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAAGCCTGGTCAGTATCCCCATTGCTaGTCTTCATCAAAGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TFIVPSQGAHKEGRIKPGQYPHC*SSSKLG Trigger: CCCCAACTTTGATGAAGATCAGCAATGGGGATACTG...ACCAGGCTTTATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR GCA 90 bp | AGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACACGGGTTGTGTTTGCTaGAATGGTCTTTCACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SFTVTQHATFIVPSQGAHTGCVC*NGLSLS Trigger: AGAAAGTGAAAGACCATTGCAGCAAACACAACCCGT...GTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATTTGTGTTTGCTGCAATaGTCTTTCACTTTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PACHIHRPIPRSTQGGKDLCLLQ*SFTFLG Trigger: GCCCAAGAAAGTGAAAGACCATTGCAGCAAACACAA...ATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | TTTCAAAGCACTTTATTGAGTTTCTGTGCCCCCAGTGTCGGGGCACTAGCTTCACATGTCCCTCCTTTGTaGCACGGGTTGTGTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FQSTLLSFCAPSVGALASHVPPL*HGLCLL Trigger: CAGCAAACACAACCCGTGCCACAAAGGAGGGACATG...TGAAGCTAGTGCCCCGACACTGGGGGCACAGAAACTCAATAAAGTGCTTTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CCA 90 bp | CCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATAAGCATTTCTCTTTCTaGCAATGTTTCCCAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PACHIHRPIPRSTQGGKDKHFSF*QCFPVR Trigger: CCTCACTGGGAAACATTGCCAGAAAGAGAAATGCTT...ATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 90 bp | CGGCCACCTCGCAGAGCACTGTCTCAGAGGGTGGGGCCGCGCCGCTaGGTAGACACACAGGCTGAACGTGAGGTGACAGGATCGCGCAAC | + |
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Preference number: 5 (lower is better) Translates to: RPPRRALSQRVGPRR*VDTQAEREVTGSRN Trigger: GTTGCGCGATCCTGTCACCTCACGTTCAGCCTGTGTGTCTACCCAGCGGCGCGGCCCCACCCTCTGAGACAGTGCTCTGCGAGGTGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS TCA 90 bp | AGGCACGGATTGATGCTGCAGGCCTGGCTGGCCACCGGCTTGCAGTaGGCCTCAGAACCTTTGCACTCGCACCTGGCCACACCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RHGLMLQAWLATGLQ*ASEPLHSHLATPPG Trigger: GCCAGGAGGTGTGGCCAGGTGCGAGTGCAAAGGTTCTGAGGCTCACTGCAAGCCGGTGGCCAGCCAGGCCTGCAGCATCAATCCGTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 90 bp | CTCAGTCATGTTCCGGTAGGTGGCCTCCACGGTCCACCGCTGACATaGCGCACCCGATTGCGTAGTTCCAGCCTGGCCCCGGTAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LSHVPVGGLHGPPLT*RTRLRSSSLAPVAE Trigger: CTCAGCTACCGGGGCCAGGCTGGAACTACGCAATCGGGTGCGCCATGTCAGCGGTGGACCGTGGAGGCCACCTACCGGAACATGACTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS TCA 90 bp | TTTTGCTTTCCTGCAGGCGCAGCAGAGCCAAGTCGTGCTGGTAGGTaGTGGAGGAGAAGCCCTCGTGAAGGCGGTAGGAGCGCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: FCFPAGAAEPSRAGR*WRRSPREGGRSAQP Trigger: TGGCTGTGCGCTCCTACCGCCTTCACGAGGGCTTCTCCTCCATCACCTACCAGCACGACTTGGCTCTGCTGCGCCTGCAGGAAAGCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 90 bp | CACGTTAGAGTTGGAGCAGCGATCCAGGGCGATAAAGGGAACCTGTaGCTCCTGCAGGAAGGTGGAGTATTCTTCAGCCCCCACTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: HVRVGAAIQGDKGNL*LLQEGGVFFSPHCG Trigger: CCCACAGTGGGGGCTGAAGAATACTCCACCTTCCTGCAGGAGGCACAGGTTCCCTTTATCGCCCTGGATCGCTGCTCCAACTCTAACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170921.2 |
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| CDS CCA 90 bp | GCAATAGTCCCAGCTCAGCCTGTCGCCACTCCAGACGAAGCACCATaGACGTGTGTCATTATCTGGGTTCCGGCAAAATGCGTGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AIVPAQPVATPDEAP*TCVIIWVPAKCVVA Trigger: GGCCACCACGCATTTTGCCGGAACCCAGATAATGACACACGTCCATGGTGCTTCGTCTGGAGTGGCGACAGGCTGAGCTGGGACTATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CAA 90 bp | TGCCCCCAGTGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGGCCCATTGGGGGTGTaGATACATGTCCCTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: CPQCRGTSFTVTQHATFIGPLGV*IHVPPL Trigger: CAAAGGAGGGACATGTATCAACACCCCCAATGGGCC...GATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACACTGGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 90 bp | CACGTTAGAGTTGGAGCAGCGATCCAGGGCGATAAAGGGAACCTGTaGCTCCTGCAGGAAGGTGGAGTATTCTTCAGCCCCCTCGAACTG | + |
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Preference number: 5 (lower is better) Translates to: HVRVGAAIQGDKGNL*LLQEGGVFFSPLEL Trigger: CAGTTCGAGGGGGCTGAAGAATACTCCACCTTCCTGCAGGAGGCACAGGTTCCCTTTATCGCCCTGGATCGCTGCTCCAACTCTAACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 90 bp | CGTGTTGGTCTTGGACAGAGAAGTCTGATGATCGGTCGAGTCATTTaGTGCATGGGACAGAGATGGTGCCTGGGACGGGGACTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: RVGLGQRSLMIGRVI*CMGQRWCLGRGLLL Trigger: CAGGAGGAGTCCCCGTCCCAGGCACCATCTCTGTCCCATGCACCAAATGACTCGACCGATCATCAGACTTCTCTGTCCAAGACCAACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CAA 90 bp | ACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGCTAGAGGTGCAAACGTaGGCGTCTGGCACTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TVTQHATFIVPSQGAHKELEVQT*ASGTAP Trigger: TGGAGCAGTGCCAGACGCCAACGTTTGCACCTCTAG...CTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 90 bp | GTTGGTCTTGGACAGAGAAGTCTGATGATCGGTCGAGTCATTTGGTaGATGGGACAGAGATGGTGCCTGGGACGGGGACTCCTCCTGACT | + |
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Preference number: 5 (lower is better) Translates to: VGLGQRSLMIGRVIW*MGQRWCLGRGLLLT Trigger: AGTCAGGAGGAGTCCCCGTCCCAGGCACCATCTCTGTCCCATGCACCAAATGACTCGACCGATCATCAGACTTCTCTGTCCAAGACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CAA 90 bp | TGCCCCCAGTGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCATACATGTCCCTCCTTaGTGGCACGGGTTGTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: CPQCRGTSFTVTQHATFIIHVPP*WHGLCL Trigger: CAAACACAACCCGTGCCACAAAGGAGGGACATGTAT...GATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACACTGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CAA 90 bp | CGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCGTCCCATCCCAAAGGATCGCGCAACTGTaGGTTTTGCTTTCCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RGTSFTVTQHATFIVPSQRIAQL*VLLSCR Trigger: CCTGCAGGAAAGCAAAACCAACAGTTGCGCGATCCT...TTGGGATGGGACGATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 90 bp | GCAGAGCCTCCCATCCACAGTGAGAACCACTGTGGGCCCATCAGGTaGGTCCTTAAATTTCTTGGAGTCTTTCCATGGTGGAGCCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: AEPPIHSENHCGPIR*VLKFLGVFPWWSRK Trigger: CTTTCGGCTCCACCATGGAAAGACTCCAAGAAATTTAAGGACGCACCTGATGGGCCCACAGTGGTTCTCACTGTGGATGGGAGGCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 90 bp | CAGGAAGGTGGAGTATTCTTCAGCCCCCACTGTGGGCCCATCAGGTaGGTCCTTAAATTTCTTGGAGTCTTTCCATGGTGGAGCCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: QEGGVFFSPHCGPIR*VLKFLGVFPWWSRK Trigger: CTTTCGGCTCCACCATGGAAAGACTCCAAGAAATTTAAGGACGCACCTGATGGGCCCACAGTGGGGGCTGAAGAATACTCCACCTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170921.2 |
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| CDS-3UTR CAA 90 bp | CCAGCATGCCACATTCATCGTCCCATCCCAAGGAGCACACAAGGAGGGAAGGATTGGTCTTTCACTTTCTaGGGCTCCAAGCAGTATCCC | + |
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Preference number: 5 (lower is better) Translates to: PACHIHRPIPRSTQGGKDWSFTF*GSKQYP Trigger: GGGATACTGCTTGGAGCCCAAGAAAGTGAAAGACCA...ATCCTTCCCTCCTTGTGTGCTCCTTGGGATGGGACGATGAATGTGGCATGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 90 bp | AGACAGTGTGGCCCATTGGGGGTGTTGATACATGTCCCTCCTTTGTaGCACGGGTTGTGTTTGCTGCAATGGTCTTTCACTTTCTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: RQCGPLGVLIHVPPL*HGLCLLQWSFTFLG Trigger: GCCCAAGAAAGTGAAAGACCATTGCAGCAAACACAACCCGTGCCACAAAGGAGGGACATGTATCAACACCCCCAATGGGCCACACTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS-3UTR CAA 90 bp | TGCCCCCAGTGTCGGGGCACTAGCTTCACTGTGACCCAGCATGCCACATTCATCCAAGCAGTATCCCCATaGCTGATCTTCATCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: CPQCRGTSFTVTQHATFIQAVSP*LIFIKV Trigger: AACTTTGATGAAGATCAGCAATGGGGATACTGCTTG...GATGAATGTGGCATGCTGGGTCACAGTGAAGCTAGTGCCCCGACACTGGGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS TCA 90 bp | CCCGTTCTAAACCATAGCTCATTCTCGTGGAAGAACTTGAGAAGCTaGGGCTCAAAGCATTTCTCTTTCTGGCAATGTTTCCCAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: PVLNHSSFSWKNLRS*GSKHFSFWQCFPVR Trigger: CCTCACTGGGAAACATTGCCAGAAAGAGAAATGCTTTGAGCCTCAGCTTCTCAAGTTCTTCCACGAGAATGAGCTATGGTTTAGAACGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 90 bp | CCGGTAGGTGGCCTCCACGGTCCACCGCTGACATGGCGCACCCGATaGCGTAGTTCCAGCCTGGCCCCGGTAGCTGAGCCCCCTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PVGGLHGPPLTWRTR*RSSSLAPVAEPPAF Trigger: GAAGGCAGGGGGCTCAGCTACCGGGGCCAGGCTGGAACTACGCAATCGGGTGCGCCATGTCAGCGGTGGACCGTGGAGGCCACCTACCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | GGCCTCCACGGTCCACCGCTGACATGGCGCACCCGATaGCGTAGTTCCAGCCTGGCCCCGGTAGCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GLHGPPLTWRTR*RSSSLAPVAEP Trigger: GGGCTCAGCTACCGGGGCCAGGCTGGAACTACGCAATCGGGTGCGCCATGTCAGCGGTGGACCGTGGAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 72 bp | GTTCCGGTAGGTGGCCTCCACGGTCCACCGCTGACATaGCGCACCCGATTGCGTAGTTCCAGCCTGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: VPVGGLHGPPLT*RTRLRSSSLAP Trigger: CGGGGCCAGGCTGGAACTACGCAATCGGGTGCGCCATGTCAGCGGTGGACCGTGGAGGCCACCTACCGGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 72 bp | CGCAGAGCACTGTCTCAGAGGGTGGGGCCGCGCCGCTaGGTAGACACACAGGCTGAACGTGAGGTGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: RRALSQRVGPRR*VDTQAEREVTG Trigger: TCCTGTCACCTCACGTTCAGCCTGTGTGTCTACCCAGCGGCGCGGCCCCACCCTCTGAGACAGTGCTCTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS TCA 72 bp | CCTGCAGGCGCAGCAGAGCCAAGTCGTGCTGGTAGGTaGTGGAGGAGAAGCCCTCGTGAAGGCGGTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PAGAAEPSRAGR*WRRSPREGGRS Trigger: GCTCCTACCGCCTTCACGAGGGCTTCTCCTCCATCACCTACCAGCACGACTTGGCTCTGCTGCGCCTGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 72 bp | GAGACTGCCCGCGCAGAAGTTGTTACCCCAGTACAGTaGAGCGATGTAGGGGTGCGACCCAGGCAGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ETARAEVVTPVQ*SDVGVRPRQSH Trigger: GTGGCTCTGCCTGGGTCGCACCCCTACATCGCTGCACTGTACTGGGGTAACAACTTCTGCGCGGGCAGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 72 bp | AGCTTAGCGCTTGCTTCTCAGTCATGTTCCGGTAGGTaGCCTCCACGGTCCACCGCTGACATGGCGCACCCG | + |
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Preference number: 6 (lower is better) Translates to: SLALASQSCSGR*PPRSTADMAHP Trigger: CGGGTGCGCCATGTCAGCGGTGGACCGTGGAGGCCACCTACCGGAACATGACTGAGAAGCAAGCGCTAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 72 bp | ATCTTGACCAAGTACCACTGTCAGTTCCTCGGGCGCTaGCCGATTCTGCAGGCAGTGAGCCGCGGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: ILTKYHCQFLGR*PILQAVSRGQH Trigger: GTGCTGACCGCGGCTCACTGCCTGCAGAATCGGCCAGCGCCCGAGGAACTGACAGTGGTACTTGGTCAAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 90 bp | GCGCAAAGCATCCCAGGGAGAATGGCGTCTCCGTGCACGTTAGAGTaGGAGCAGCGATCCAGGGCGATAAAGGGAACCTGTGCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AQSIPGRMASPCTLE*EQRSRAIKGTCASC Trigger: GCAGGAGGCACAGGTTCCCTTTATCGCCCTGGATCGCTGCTCCAACTCTAACGTGCACGGAGACGCCATTCTCCCTGGGATGCTTTGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021948.15 ENSMUST00000170921.2 |
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| CDS CAA 72 bp | CCTCCTGACTCTCAGGGACAACTAGAGGTGCAAACGTaGGCGTCTGGCACTGCTCCAGGCCGCAATAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PPDSQGQLEVQT*ASGTAPGRNSP Trigger: GGGACTATTGCGGCCTGGAGCAGTGCCAGACGCCAACGTTTGCACCTCTAGTTGTCCCTGAGAGTCAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 72 bp | CCAGCTCAGCCTGTCGCCACTCCAGACGAAGCACCATaGACGTGTGTCATTATCTGGGTTCCGGCAAAATGC | + |
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Preference number: 6 (lower is better) Translates to: PAQPVATPDEAP*TCVIIWVPAKC Trigger: GCATTTTGCCGGAACCCAGATAATGACACACGTCCATGGTGCTTCGTCTGGAGTGGCGACAGGCTGAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CCA 72 bp | CAGGCTGAACGTGAGGTGACAGGATCGCGCAACTGTTaGTTTTGCTTTCCTGCAGGCGCAGCAGAGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: QAEREVTGSRNC*FCFPAGAAEPS Trigger: ACTTGGCTCTGCTGCGCCTGCAGGAAAGCAAAACCAACAGTTGCGCGATCCTGTCACCTCACGTTCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | CCAGTGAGGTGTTCAGGGCAGAGACAGTGTGGCCCATaGGGGGTGTTGATACATGTCCCTCCTTTGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PVRCSGQRQCGP*GVLIHVPPLWH Trigger: GTGCCACAAAGGAGGGACATGTATCAACACCCCCAATGGGCCACACTGTCTCTGCCCTGAACACCTCACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | ATCCCAGGGAGAATGGCGTCTCCGTGCACGTTAGAGTaGGAGCAGCGATCCAGGGCGATAAAGGGAACCTGT | + |
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Preference number: 6 (lower is better) Translates to: IPGRMASPCTLE*EQRSRAIKGTC Trigger: ACAGGTTCCCTTTATCGCCCTGGATCGCTGCTCCAACTCTAACGTGCACGGAGACGCCATTCTCCCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021948.15 ENSMUST00000170921.2 |
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| CDS CAA 90 bp | CCAGTGAGGTGTTCAGGGCAGAGACAGTGTGGCCCATTGGGGGTGTaGATACATGTCCCTCCTTTGTGGCACGGGTTGTGTTTGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: PVRCSGQRQCGPLGV*IHVPPLWHGLCLLQ Trigger: TTGCAGCAAACACAACCCGTGCCACAAAGGAGGGACATGTATCAACACCCCCAATGGGCCACACTGTCTCTGCCCTGAACACCTCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 90 bp | TCGTGTTGGTCTTGGACAGAGAAGTCTGATGATCGGTCGAGTCATTaGGTGCATGGGACAGAGATGGTGCCTGGGACGGGGACTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SCWSWTEKSDDRSSH*VHGTEMVPGTGTPP Trigger: AGGAGGAGTCCCCGTCCCAGGCACCATCTCTGTCCCATGCACCAAATGACTCGACCGATCATCAGACTTCTCTGTCCAAGACCAACACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS TCA 72 bp | GTTCAGGGCAGAGACAGTGTGGCCCATTGGGGGTGTTaGTACATGTCCCTCCTTTGTGGCACGGGTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VQGRDSVAHWGC*YMSLLCGTGCV Trigger: AACACAACCCGTGCCACAAAGGAGGGACATGTATCAACACCCCCAATGGGCCACACTGTCTCTGCCCTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | TGTTCAGGGCAGAGACAGTGTGGCCCATTGGGGGTGTaGATACATGTCCCTCCTTTGTGGCACGGGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: CSGQRQCGPLGV*IHVPPLWHGLC Trigger: ACACAACCCGTGCCACAAAGGAGGGACATGTATCAACACCCCCAATGGGCCACACTGTCTCTGCCCTGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | TCTTGGACAGAGAAGTCTGATGATCGGTCGAGTCATTaGGTGCATGGGACAGAGATGGTGCCTGGGACGGGG | + |
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Preference number: 6 (lower is better) Translates to: SWTEKSDDRSSH*VHGTEMVPGTG Trigger: CCCCGTCCCAGGCACCATCTCTGTCCCATGCACCAAATGACTCGACCGATCATCAGACTTCTCTGTCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 90 bp | CAATGTTTCCCAGTGAGGTGTTCAGGGCAGAGACAGTGTGGCCCATaGGGGGTGTTGATACATGTCCCTCCTTTGTGGCACGGGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: QCFPVRCSGQRQCGP*GVLIHVPPLWHGLC Trigger: ACACAACCCGTGCCACAAAGGAGGGACATGTATCAACACCCCCAATGGGCCACACTGTCTCTGCCCTGAACACCTCACTGGGAAACATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 72 bp | CCCATCCACAGTGAGAACCACTGTGGGCCCATCAGGTaGGTCCTTAAATTTCTTGGAGTCTTTCCATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PIHSENHCGPIR*VLKFLGVFPWW Trigger: CCACCATGGAAAGACTCCAAGAAATTTAAGGACGCACCTGATGGGCCCACAGTGGTTCTCACTGTGGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS GCA 72 bp | GGAGTATTCTTCAGCCCCCACTGTGGGCCCATCAGGTaGGTCCTTAAATTTCTTGGAGTCTTTCCATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GVFFSPHCGPIR*VLKFLGVFPWW Trigger: CCACCATGGAAAGACTCCAAGAAATTTAAGGACGCACCTGATGGGCCCACAGTGGGGGCTGAAGAATACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170921.2 |
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| CDS CAA 72 bp | TGTGGCCCATTGGGGGTGTTGATACATGTCCCTCCTTaGTGGCACGGGTTGTGTTTGCTGCAATGGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: CGPLGVLIHVPP*WHGLCLLQWSF Trigger: GAAAGACCATTGCAGCAAACACAACCCGTGCCACAAAGGAGGGACATGTATCAACACCCCCAATGGGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | CCCACTGTGGGCCCATCAGGTGCGTCCTTAAATTTCTaGGAGTCTTTCCATGGTGGAGCCGAAAGTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PTVGPSGASLNF*ESFHGGAESVR Trigger: TCTGACACTTTCGGCTCCACCATGGAAAGACTCCAAGAAATTTAAGGACGCACCTGATGGGCCCACAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170921.2 |
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| CDS CAA 72 bp | ACCACTGTGGGCCCATCAGGTGCGTCCTTAAATTTCTaGGAGTCTTTCCATGGTGGAGCCGAAAGTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TTVGPSGASLNF*ESFHGGAESVR Trigger: TCTGACACTTTCGGCTCCACCATGGAAAGACTCCAAGAAATTTAAGGACGCACCTGATGGGCCCACAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS TCA 72 bp | TTCACTTTCTTGGGCTCCAAGCAGTATCCCCATTGCTaGTCTTCATCAAAGTTGGGGGTGGTAGCACACCAG | + |
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Preference number: 6 (lower is better) Translates to: FTFLGSKQYPHC*SSSKLGVVAHQ Trigger: CTGGTGTGCTACCACCCCCAACTTTGATGAAGATCAGCAATGGGGATACTGCTTGGAGCCCAAGAAAGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | GTCTTTCACTTTCTTGGGCTCCAAGCAGTATCCCCATaGCTGATCTTCATCAAAGTTGGGGGTGGTAGCACA | + |
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Preference number: 6 (lower is better) Translates to: VFHFLGLQAVSP*LIFIKVGGGST Trigger: TGTGCTACCACCCCCAACTTTGATGAAGATCAGCAATGGGGATACTGCTTGGAGCCCAAGAAAGTGAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS CAA 72 bp | TTGATACATGTCCCTCCTTTGTGGCACGGGTTGTGTTaGCTGCAATGGTCTTTCACTTTCTTGGGCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LIHVPPLWHGLC*LQWSFTFLGSK Trigger: CTTGGAGCCCAAGAAAGTGAAAGACCATTGCAGCAAACACAACCCGTGCCACAAAGGAGGGACATGTATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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| CDS TCA 72 bp | AACCATAGCTCATTCTCGTGGAAGAACTTGAGAAGCTaGGGCTCAAAGCATTTCTCTTTCTGGCAATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: NHSSFSWKNLRS*GSKHFSFWQCF Trigger: GAAACATTGCCAGAAAGAGAAATGCTTTGAGCCTCAGCTTCTCAAGTTCTTCCACGAGAATGAGCTATGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021948.15 |
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