Pregenerated sensors for F11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031645Ensembl transcript IDs: ENSMUST00000034064.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGATGCAGAAAACAACCAGTGGTTCTCCCAGATCAGGAATTCTGAAAATAATATCAAGCTCATTTCTATaGAATAATCTTCCAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: WMQKTTSGSPRSGILKIISSSFL*NNLPGP Trigger: TGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGA...TATTATTTTCAGAATTCCTGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| 3UTR CCA 72 bp | CCAGTGTCTTCATCAGAGACGTCAAGCTCATTTCTATaGAATAATCTTCCAGGGCCACAAAGTGATACCAGT | + |
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Preference number: 3 (lower is better) Translates to: PVSSSETSSSFL*NNLPGPQSDTS Trigger: ACTGGTATCACTTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAGACACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| 3UTR CCA 72 bp | TTCTGGGTGTTCTTACGTACATCAAGGCCATTCAATTaGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: FWVFLRTSRPFN*LQWKSQYPSVF Trigger: GAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCTTGATGTACGTAAGAACACCCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| 3UTR CCA 72 bp | AATCTCCTTGCTGTATTTGTTTCCTTGAGTAGTAGCTaGATGCAGAAAACAACCAGTGGTTCTCCCAGATCA | + |
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Preference number: 3 (lower is better) Translates to: NLLAVFVSLSSS*MQKTTSGSPRS Trigger: TGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCAGCTACTACTCAAGGAAACAAATACAGCAAGGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | CCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACCCCGGTCTCTCCTTCTaGCCACAGCCTTCACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PFNWLQWKSQYPSVFIRDPGLSF*PQPSPQ Trigger: CTGGGGTGAAGGCTGTGGTCAGAAGGAGAGACCGGG...GTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTTCATGGCCACTCACCGTaGACAGACGCAGCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: YSGRVSIPVSSSETSSSFHGHSP*TDAAPP Trigger: AGGAGGAGCTGCGTCTGTTCACGGTGAGTGGCCATG...AAATGAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | GCCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGAACAGGTGTCCCTGGCTaGTGTGCAGAGTCACCTGCC | + |
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Preference number: 4 (lower is better) Translates to: AIQLVTVEESVSQCLHQRTGVPG*CAESPA Trigger: GGCAGGTGACTCTGCACATCAGCCAGGGACACCTGT...TCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | GTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATCTGTGCCTGCAGTGCTaGAGACTGAAGCCCGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VTVEESVSQCLHQRRQAHLCLQC*RLKPER Trigger: CCTTTCGGGCTTCAGTCTCCAGCACTGCAGGCACAG...ATGAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | TGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCTTTGCACAGCCTCAGTaGGTATCCAGAGATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WLQWKSQYPSVFIRDVKLFAQPQ*VSRDAS Trigger: GGAGGCATCTCTGGATACTCACTGAGGCTGTGCAAA...GAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | TTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCAGAGTCACCTGCCATaGCCACTCACCGTGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: LVTVEESVSQCLHQRRQAQSHLP*PLTVNR Trigger: TCTGTTCACGGTGAGTGGCCATGGCAGGTGACTCTG...AGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | TGGATGCAGAAAACAACCAGTGGTTCTCCCAGATCAGGAATTCTGAAAATAATATGCAGTGCTGGAGACTaGAGCCCGAAAGGGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WMQKTTSGSPRSGILKIICSAGD*SPKGRG Trigger: GCCACGCCCTTTCGGGCTTCAGTCTCCAGCACTGCA...TATTATTTTCAGAATTCCTGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | TGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCGTGATGCCCACCAAGTaGCAGACCCCATTGTATTTG | + |
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Preference number: 4 (lower is better) Translates to: WLQWKSQYPSVFIRDVKLVMPTK*QTPLYL Trigger: CAAATACAATGGGGTCTGGCACTTGGTGGGCATCAC...GAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAACCACACAGGTGTCCCTaGCTGATGTGCAGAGTCACC | + |
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Preference number: 4 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKPHRCP*LMCRVT Trigger: GGTGACTCTGCACATCAGCCAGGGACACCTGTGTGG...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAACACTGTGCCTGCAGTaGTGGAGACTGAAGCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKTLCLQ*WRLKPE Trigger: TTCGGGCTTCAGTCTCCAGCACTGCAGGCACAGTGT...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAATCCAGTCCACGTACTTaGCCACGTTCGTGTAGACCC | + |
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Preference number: 4 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKSSPRT*PRSCRP Trigger: GGGTCTACACGAACGTGGCCAAGTACGTGGACTGGA...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | TTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCGTGAGTATCCAGAGATaGCTCCCCTCCCATGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: FNWLQWKSQYPSVFIRDVVSIQR*LPSHEV Trigger: TACTTCATGGGAGGGGAGGCATCTCTGGATACTCAC...GACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | TTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTACCCAGCATTCTGTGTaGACTGCGTTTCTATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LVTVEESVSQCLHQRRQATQHSV*TAFLSP Trigger: AGGAGATAGAAACGCAGTGCACACAGAATGCTGGGT...AGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTTCTCAGGTCACCTCCTTaGAAGCTGATGTCTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: YSGRVSIPVSSSETSSSFLRSPP*KLMSLK Trigger: CTTCAAAGACATCAGCTTTCAAGGAGGTGACCTGAG...AAATGAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | TACATCAAGGCCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTTCCATTGGTTTCCAATaGTGGAGCCTCCACACAGGT | + |
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Preference number: 4 (lower is better) Translates to: YIKAIQLVTVEESVSQCLSIGFQ*WSLHTG Trigger: ACCTGTGTGGAGGCTCCATCATTGGAAACCAATGGA...AAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCTTGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAGGTGATGCGTGCAGATaGGACGACAGACAAAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKGDACR*DDRQKH Trigger: ATGCTTTTGTCTGTCGTCGCATCTGCACGCATCACC...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAATGCGGTTCCTCTCATTaGACAGTCTGTGCGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKCGSSH*TVCAMD Trigger: ATCCATCGCACAGACTGTGCAATGAGAGGAACCGCA...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | AGGCCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAAGACAAAGATGTCTCTaGGATTCTTTCGGCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: RPFNWLQWKSQYPSVFIRRQRCL*DSFGHA Trigger: AGCATGGCCGAAAGAATCTCAGAGACATCTTTGTCT...TCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTTGCACAGTCTGTGCGATaGATAGTAGGTAAAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: YSGRVSIPVSSSETSSSFAQSVR*IVGKEL Trigger: CAGTTCTTTACCTACTATCCATCGCACAGACTGTGC...AAATGAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | CGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAGTGATACCAGTTCGTTTCTATCTCCTTTaGAAGGCAGGCATATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RQAHFYGIIFQGHKVIPVRFYLL*KAGILA Trigger: GGCCAATATGCCTGCCTTCCAAAGGAGATAGAAACG...AACTGGTATCACTTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | TCTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAATTGGTACACGTTTTCTaGCAGGTTTCTTGGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SSSETSSSFLWNNLPGPQLVHVF*QVSWPF Trigger: GAAAGGCCAAGAAACCTGTCAGAAAACGTGTACCAA...TTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | AGGCCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGATCATTTCTTGAACCCTaGAGAAAGCAGTCCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RPFNWLQWKSQYPSVFIRSFLEP*RKQSLH Trigger: ATGAAGGGACTGCTTTCTTCAGGGTTCAAGAAATGA...TCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | ATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCCTTCTGTATCTTGTCTaGCATTCTTCATTTGACACC | + |
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Preference number: 4 (lower is better) Translates to: IGYSGRVSIPVSSSETSSLLYLV*HSSFDT Trigger: GGTGTCAAATGAAGAATGTCAGACAAGATACAGAAG...GCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | ATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCACACATTATCCATTTTaGACAGCCTCAGTGAGTATC | + |
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Preference number: 4 (lower is better) Translates to: IGYSGRVSIPVSSSETSSTHYPF*TASVSI Trigger: GATACTCACTGAGGCTGTGCAAAATGGATAATGTGT...GCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAACTGATTGATTTACAATaGCACCGTAGACACGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKLIDLQ*HRRHAA Trigger: AGCTGCGTGTCTACGGTGGCATTGTAAATCAATCAG...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | TTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTTCCTTCTTTGTAGCCTaGACAGATCATCTTATTGGT | + |
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Preference number: 4 (lower is better) Translates to: LVTVEESVSQCLHQRRQASFFVA*TDHLIG Trigger: ACCAATAAGATGATCTGTGCAGGCTACAAAGAAGGA...AGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | TGGATGCAGAAAACAACCAGTGGTTCTCCCAGATCAGGAATTCTGAAAATAATACTCCAGAATCTCCCTTaGACGTATCCTTCCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: WMQKTTSGSPRSGILKIILQNLP*TYPSLL Trigger: AAGGAGGGAAGGATACGTGCAAGGGAGATTCTGGAG...TATTATTTTCAGAATTCCTGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | TCTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAGCTGTCAGTATCCATTaGTTTCCAATGATGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSSETSSSFLWNNLPGPQAVSIH*FPMMEP Trigger: AGGCTCCATCATTGGAAACCAATGGATACTGACAGC...TTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| 3UTR CAA 72 bp | TTTCTGGGTGTTCTTACGTACATCAAGGCCATTCAATaGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLGVLTYIKAIQ*VTVEESVSQCL Trigger: AAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCTTGATGTACGTAAGAACACCCAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAGGAACCTTGGCTTTCTaGAGAGTACTTTGTACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKGTLAF*RVLCTS Trigger: TGAAGTACAAAGTACTCTTCAGAAAGCCAAGGTTCC...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | TACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTTCGTACACATCTTTGCTaGAAGTACTTAATTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: YSGRVSIPVSSSETSSSFRTHLC*KYLIAE Trigger: CTCAGCAATTAAGTACTTGCAGCAAAGATGTGTACG...AAATGAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | GTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCTTGGGAAAAGAATGTaGAGAACAAACAAGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VSQCLHQRRQAHFYGIIFLGKRM*RTNKWG Trigger: ACCCCACTTGTTTGTTCTTCACATTCTTTTCCCAAG...GAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAGACACTGGGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | CAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAGTGATAAGATTCTTTCGGCCATaGTTGGGAAAAGAATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: QRRQAHFYGIIFQGHKVIRFFRP*LGKECE Trigger: TTCACATTCTTTTCCCAAGCATGGCCGAAAGAATCT...TATCACTTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | TTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCTGTCATGTTTACCATTaGCAATATTTCTGTGACGCT | + |
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Preference number: 4 (lower is better) Translates to: FNWLQWKSQYPSVFIRDVCHVYH*QYFCDA Trigger: AGCGTCACAGAAATATTGCCAATGGTAAACATGACA...GACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR TCA 90 bp | CAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAGTGATACCCTTCATTTATTTCTaGTTGATTTACAATGCCACC | + |
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Preference number: 4 (lower is better) Translates to: QRRQAHFYGIIFQGHKVIPFIYF*LIYNAT Trigger: GGTGGCATTGTAAATCAATCAGAAATAAATGAAGGG...TATCACTTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | TGGATGCAGAAAACAACCAGTGGTTCTCCCAGATCAGGAATTCTGAAAATAATATCTTTCGGCCATGCTTaGGAAAAGAATGTGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: WMQKTTSGSPRSGILKIISFGHA*EKNVKN Trigger: GTTCTTCACATTCTTTTCCCAAGCATGGCCGAAAGA...TATTATTTTCAGAATTCCTGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CCA 90 bp | GTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCACACCAATGGAACCTTaGCTTTCTGAAGAGTACTTT | + |
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Preference number: 4 (lower is better) Translates to: VSQCLHQRRQAHFYGIIFTPMEP*LSEEYF Trigger: AAAGTACTCTTCAGAAAGCCAAGGTTCCATTGGTGT...GAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAGACACTGGGATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR GCA 90 bp | AATAATAGTTTTCTTTCTGGGTGTTCTTACGTACATCAAGGCCATTCAATTGGTAGCTGTTATAGTTCATaGCCTTCATGTCTAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NNSFLSGCSYVHQGHSIGSCYSS*PSCLGS Trigger: TGAACCTAGACATGAAGGGCATGAACTATAACAGCT...ACCAATTGAATGGCCTTGATGTACGTAAGAACACCCAGAAAGAAAACTATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 90 bp | GAAGATGACTCAGCCATGAACGTGAAGAGCAAGCACCGTGGGTGGTaGGTGCAGACCAAGCGGCAGTATGTGGCGCTCGGTGTGAAAACA | + |
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Preference number: 5 (lower is better) Translates to: EDDSAMNVKSKHRGW*VQTKRQYVALGVKT Trigger: TGTTTTCACACCGAGCGCCACATACTGCCGCTTGGTCTGCACTCACCACCCACGGTGCTTGCTCTTCACGTTCATGGCTGAGTCATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 90 bp | GTATTCTCGTTGGAGATCCATTGGAGGAAAGCTTTAGGTAACATCTaGCCCTGCGGTTCCTCTCATTGCACAGTCTGTGCGATGGATAGT | + |
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Preference number: 5 (lower is better) Translates to: VFSLEIHWRKALGNI*PCGSSHCTVCAMDS Trigger: ACTATCCATCGCACAGACTGTGCAATGAGAGGAACCGCAGGGGCAGATGTTACCTAAAGCTTTCCTCCAATGGATCTCCAACGAGAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 90 bp | TGCACACATTATCCATTTTGCACAGCCTCAGTGAGTATCCAGAGATaGCTCCCCTCCCATGAAGTATTCTCGTTGGAGATCCATTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CTHYPFCTASVSIQR*LPSHEVFSLEIHWR Trigger: CCTCCAATGGATCTCCAACGAGAATACTTCATGGGAGGGGAGGCATCTCTGGATACTCACTGAGGCTGTGCAAAATGGATAATGTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | CAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAGTGATAGCTTCGTTATTGTGGTaGGCGTCCCCGTTCGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: QRRQAHFYGIIFQGHKVIASLLW*ASPFGC Trigger: ACACCCGAACGGGGACGCCAACCACAATAACGAAGC...TATCACTTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TACATCAAGGCCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCAGACCCCATTGTATTaGCAGGACAGGGGCCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: YIKAIQLVTVEESVSQCLQTPLY*QDRGPP Trigger: TGGAGGGCCCCTGTCCTGCAAATACAATGGGGTCTG...AAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCTTGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 90 bp | GACACGCAGCTTTTTAGGTGTCTCTATCCCAGAGAAACAATGAGCTaGTGTCAGTATCCATTGGTTTCCAATGATGGAGCCTCCACACAG | + |
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Preference number: 5 (lower is better) Translates to: DTQLFRCLYPRETMS*CQYPLVSNDGASTQ Trigger: CTGTGTGGAGGCTCCATCATTGGAAACCAATGGATACTGACAGCAGCTCATTGTTTCTCTGGGATAGAGACACCTAAAAAGCTGCGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TACATCAAGGCCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCCTCCAGAATCTCCCTaGCACGTATCCTTCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: YIKAIQLVTVEESVSQCLPPESP*HVSFPP Trigger: AGGAGGGAAGGATACGTGCAAGGGAGATTCTGGAGG...AAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCTTGATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | CTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAAAAAGTGCCAGACCCCATaGTATTTGCAGGACAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LHQRRQAHFYGIIFQGHKKCQTP*YLQDRG Trigger: GCCCCTGTCCTGCAAATACAATGGGGTCTGGCACTT...TTTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 90 bp | CCTGGCATTCTCGAGCATTCTTCACGACAGAGCTGTTATAGTTCATaGCCTTCATGTCTAGGTTCACGTACACATCTTTGCTGCAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: PGILEHSSRQSCYSS*PSCLGSRTHLCCKY Trigger: GTACTTGCAGCAAAGATGTGTACGTGAACCTAGACATGAAGGGCATGAACTATAACAGCTCTGTCGTGAAGAATGCTCGAGAATGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 90 bp | TTGCTTGAAGGAATATCCAGAGATCGCGCCTGTCATGTTTACCATTaGCAATATTTCTGTGACGCTGTCCTTCAGGATGCAGGCAAACCA | + |
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Preference number: 5 (lower is better) Translates to: LLEGISRDRACHVYH*QYFCDAVLQDAGKP Trigger: TGGTTTGCCTGCATCCTGAAGGACAGCGTCACAGAAATATTGCCAATGGTAAACATGACAGGCGCGATCTCTGGATATTCCTTCAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTTTGGAAGGCAGGCATATaGGCCGCTGAAAATCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: YSGRVSIPVSSSETSSSFWKAGI*AAENLC Trigger: ACACAGATTTTCAGCGGCCAATATGCCTGCCTTCCA...AAATGAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 90 bp | CGTACACATCTTTGCTGCAAGTACTTAATTGCTGAGGGCATTGCTTaGAGGAATATCCAGAGATCGCGCCTGTCATGTTTACCATTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RTHLCCKYLIAEGIA*RNIQRSRLSCLPLA Trigger: TGCCAATGGTAAACATGACAGGCGCGATCTCTGGATATTCCTTCAAGCAATGCCCTCAGCAATTAAGTACTTGCAGCAAAGATGTGTACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 90 bp | ATGTCTAGGTTCACGTACACATCTTTGCTGCAAGTACTTAATTGCTaGGGGCATTGCTTGAAGGAATATCCAGAGATCGCGCCTGTCATG | + |
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Preference number: 5 (lower is better) Translates to: MSRFTYTSLLQVLNC*GHCLKEYPEIAPVM Trigger: CATGACAGGCGCGATCTCTGGATATTCCTTCAAGCAATGCCCTCAGCAATTAAGTACTTGCAGCAAAGATGTGTACGTGAACCTAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTCATTCCAGATACCACGCCATaGAGCTTCGTTATTGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LQWKSQYPSVFIRDVKLIPDTTP*SFVIVV Trigger: AACCACAATAACGAAGCTCAATGGCGTGGTATCTGG...AATGAGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TCTTCATCAGAGACGTCAAGCTCATTTCTATGGAATAATCTTCCAGGGCCACAATGCTGTCAGTATCCATaGGTTTCCAATGATGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSSETSSSFLWNNLPGPQCCQYP*VSNDGA Trigger: GGCTCCATCATTGGAAACCAATGGATACTGACAGCA...TTGTGGCCCTGGAAGATTATTCCATAGAAATGAGCTTGACGTCTCTGATGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TGGATGCAGAAAACAACCAGTGGTTCTCCCAGATCAGGAATTCTGAAAATAATAGCGTTTCTATCTCCTTaGGAAGGCAGGCATATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WMQKTTSGSPRSGILKIIAFLSP*EGRHIG Trigger: GCCAATATGCCTGCCTTCCAAAGGAGATAGAAACGC...TATTATTTTCAGAATTCCTGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | AGGCCATTCAATTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGATTCACGTACACATCTTaGCTGCAAGTACTTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: RPFNWLQWKSQYPSVFIRFTYTS*LQVLNC Trigger: GCAATTAAGTACTTGCAGCAAAGATGTGTACGTGAA...TCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAATTGAATGGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TTGGTTACAGTGGAAGAGTCAGTATCCCAGTGTCTTCATCAGAGACGTCAAGCTGCACAGATCATCTTATaGGTTATTTTGTGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTVEESVSQCLHQRRQAAQIIL*VILCLL Trigger: CAGAAGACACAAAATAACCAATAAGATGATCTGTGC...AGCTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 90 bp | TTCTGTATCTTGTCTGACATTCTTCATTTGACACCAATGGAACCTTaGCTTTCTGAAGAGTACTTTGTACTTCACCTCTTAGTGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCILSDILHLTPMEP*LSEEYFVLHLLVLC Trigger: ACACAGCACTAAGAGGTGAAGTACAAAGTACTCTTCAGAAAGCCAAGGTTCCATTGGTGTCAAATGAAGAATGTCAGACAAGATACAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS-3UTR CAA 90 bp | TGGATGCAGAAAACAACCAGTGGTTCTCCCAGATCAGGAATTCTGAAAATAATATTCTTTCGGCCATGCTaGGGAAAAGAATGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WMQKTTSGSPRSGILKIIFFRPC*GKECEE Trigger: TTCTTCACATTCTTTTCCCAAGCATGGCCGAAAGAA...TATTATTTTCAGAATTCCTGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 72 bp | GACGGATGGCAGAATACTGGGACACTGTGCCTGCAGTaGTGGAGACTGAAGCCCGAAAGGGCGTGGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DGWQNTGTLCLQ*WRLKPERAWLF Trigger: AAAGAGCCACGCCCTTTCGGGCTTCAGTCTCCAGCACTGCAGGCACAGTGTCCCAGTATTCTGCCATCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | GGATGGCAGAATACTGGGACACTGTGCCTGCAGTGCTaGAGACTGAAGCCCGAAAGGGCGTGGCTCTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GWQNTGTLCLQC*RLKPERAWLFV Trigger: TACAAAGAGCCACGCCCTTTCGGGCTTCAGTCTCCAGCACTGCAGGCACAGTGTCCCAGTATTCTGCCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | TGCCTGCAGTGCTGGAGACTGAAGCCCGAAAGGGCGTaGCTCTTTGTAATGCGTGTGCTTGGTAATCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CLQCWRLKPERA*LFVMRVLGNPL Trigger: AAGTGGATTACCAAGCACACGCATTACAAAGAGCCACGCCCTTTCGGGCTTCAGTCTCCAGCACTGCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 72 bp | CACAGGACTTCAGTGAAAATCCAGATACCACGCCATTaGGCTTCGTTATTGTGGTTGGCGTCCCCGTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRTSVKIQIPRH*ASLLWLASPFG Trigger: CCCGAACGGGGACGCCAACCACAATAACGAAGCTCAATGGCGTGGTATCTGGATTTTCACTGAAGTCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | ATCAGTGTCGTTGTAAAAGGACGGATGGCAGAATACTaGGACACTGTGCCTGCAGTGCTGGAGACTGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ISVVVKGRMAEY*DTVPAVLETEA Trigger: GGCTTCAGTCTCCAGCACTGCAGGCACAGTGTCCCAGTATTCTGCCATCCGTCCTTTTACAACGACACTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 72 bp | CCACAGGACTTCAGTGAAAATCCAGATACCACGCCATaGAGCTTCGTTATTGTGGTTGGCGTCCCCGTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PQDFSENPDTTP*SFVIVVGVPVR Trigger: CCGAACGGGGACGCCAACCACAATAACGAAGCTCAATGGCGTGGTATCTGGATTTTCACTGAAGTCCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 90 bp | GAACTGGCAGCGGGCGTTATTGGTACACGTTTTCTGACAGGTTTCTaGGCCTTTCACATCGACGATGTCCAGCTCTTCTCCCAAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: ELAAGVIGTRFLTGF*AFHIDDVQLFSQEI Trigger: GATTTCTTGGGAGAAGAGCTGGACATCGTCGATGTGAAAGGCCAAGAAACCTGTCAGAAAACGTGTACCAATAACGCCCGCTGCCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 90 bp | TCAGTGAGTATCCAGAGATGCCTCCCCTCCCATGAAGTATTCTCGTaGGAGATCCATTGGAGGAAAGCTTTAGGTAACATCTGCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVSIQRCLPSHEVFS*EIHWRKALGNICPC Trigger: GCAGGGGCAGATGTTACCTAAAGCTTTCCTCCAATGGATCTCCAACGAGAATACTTCATGGGAGGGGAGGCATCTCTGGATACTCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 72 bp | GATGGTCCACACTGGGAAAATACCCTGTTGCGTATGTaGAAAACTGGCAGTGGGCATCGTCTGTGCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DGPHWENTLLRM*KTGSGHRLCIS Trigger: AGAGATGCACAGACGATGCCCACTGCCAGTTTTTCACATACGCAACAGGGTATTTTCCCAGTGTGGACCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 72 bp | AAGAACTGGCAGCGGGCGTTATTGGTACACGTTTTCTaGCAGGTTTCTTGGCCTTTCACATCGACGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KNWQRALLVHVF*QVSWPFTSTMS Trigger: GGACATCGTCGATGTGAAAGGCCAAGAAACCTGTCAGAAAACGTGTACCAATAACGCCCGCTGCCAGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | GGAAAATACCCTGTTGCGTATGTGAAAAACTGGCAGTaGGCATCGTCTGTGCATCTCTCCTGGCATTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GKYPVAYVKNWQ*ASSVHLSWHSR Trigger: TCGAGAATGCCAGGAGAGATGCACAGACGATGCCCACTGCCAGTTTTTCACATACGCAACAGGGTATTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | TCCAGATACCACGCCATTGAGCTTCGTTATTGTGGTTaGCGTCCCCGTTCGGGTGTACTTCAAAAGACACAT | + |
|
Preference number: 6 (lower is better) Translates to: SRYHAIELRYCG*RPRSGVLQKTH Trigger: ATGTGTCTTTTGAAGTACACCCGAACGGGGACGCCAACCACAATAACGAAGCTCAATGGCGTGGTATCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | CCCAGCATTCTGTGTGCACTGCGTTTCTATCTCCTTTaGAAGGCAGGCATATTGGCCGCTGAAAATCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSILCALRFYLL*KAGILAAENLC Trigger: ACACAGATTTTCAGCGGCCAATATGCCTGCCTTCCAAAGGAGATAGAAACGCAGTGCACACAGAATGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 72 bp | TCTGTGACGCTGTCCTTCAGGATGCAGGCAAACCATTaGGTAGGATCATCCGAAGATGACTCAGCCATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SVTLSFRMQANH*VGSSEDDSAMN Trigger: GTTCATGGCTGAGTCATCTTCGGATGATCCTACCAAATGGTTTGCCTGCATCCTGAAGGACAGCGTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 90 bp | GGCAATATTTCTGTGACGCTGTCCTTCAGGATGCAGGCAAACCATTaGGTAGGATCATCCGAAGATGACTCAGCCATGAACGTGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GNISVTLSFRMQANH*VGSSEDDSAMNVKS Trigger: GCTCTTCACGTTCATGGCTGAGTCATCTTCGGATGATCCTACCAAATGGTTTGCCTGCATCCTGAAGGACAGCGTCACAGAAATATTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 72 bp | GGCGCTCGGTGTGAAAACAGTACTCAGGTCACCTCCTaGAAAGCTGATGTCTTTGAAGACCTTAGTAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: GARCENSTQVTS*KADVFEDLSNA Trigger: TGCGTTACTAAGGTCTTCAAAGACATCAGCTTTCAAGGAGGTGACCTGAGTACTGTTTTCACACCGAGCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 72 bp | AGTTGTGCACACATTATCCATTTTGCACAGCCTCAGTaGGTATCCAGAGATGCCTCCCCTCCCATGAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SCAHIIHFAQPQ*VSRDASPPMKY Trigger: ATACTTCATGGGAGGGGAGGCATCTCTGGATACTCACTGAGGCTGTGCAAAATGGATAATGTGTGCACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | GGAATATCCAGAGATCGCGCCTGTCATGTTTACCATTaGCAATATTTCTGTGACGCTGTCCTTCAGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: GISRDRACHVYH*QYFCDAVLQDA Trigger: TGCATCCTGAAGGACAGCGTCACAGAAATATTGCCAATGGTAAACATGACAGGCGCGATCTCTGGATATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 72 bp | ATCCAGAGATGCCTCCCCTCCCATGAAGTATTCTCGTaGGAGATCCATTGGAGGAAAGCTTTAGGTAACATC | + |
|
Preference number: 6 (lower is better) Translates to: IQRCLPSHEVFS*EIHWRKALGNI Trigger: GATGTTACCTAAAGCTTTCCTCCAATGGATCTCCAACGAGAATACTTCATGGGAGGGGAGGCATCTCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 72 bp | CTGGGGTTGATTTTAGTTGTGCACACATTATCCATTTaGCACAGCCTCAGTGAGTATCCAGAGATGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGLILVVHTLSI*HSLSEYPEMPP Trigger: GGGAGGCATCTCTGGATACTCACTGAGGCTGTGCAAAATGGATAATGTGTGCACAACTAAAATCAACCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 72 bp | CTCGAGCATTCTTCACGACAGAGCTGTTATAGTTCATaGCCTTCATGTCTAGGTTCACGTACACATCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LEHSSRQSCYSS*PSCLGSRTHLC Trigger: GCAAAGATGTGTACGTGAACCTAGACATGAAGGGCATGAACTATAACAGCTCTGTCGTGAAGAATGCTCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 72 bp | GCACTGCGTTTCTATCTCCTTTGGAAGGCAGGCATATaGGCCGCTGAAAATCTGTGTAATTCATGGCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: ALRFYLLWKAGI*AAENLCNSWLI Trigger: AATCAGCCATGAATTACACAGATTTTCAGCGGCCAATATGCCTGCCTTCCAAAGGAGATAGAAACGCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 72 bp | CTTTGCTGCAAGTACTTAATTGCTGAGGGCATTGCTTaGAGGAATATCCAGAGATCGCGCCTGTCATGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LCCKYLIAEGIA*RNIQRSRLSCL Trigger: TAAACATGACAGGCGCGATCTCTGGATATTCCTTCAAGCAATGCCCTCAGCAATTAAGTACTTGCAGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS TCA 72 bp | TTCACGTACACATCTTTGCTGCAAGTACTTAATTGCTaGGGGCATTGCTTGAAGGAATATCCAGAGATCGCG | + |
|
Preference number: 6 (lower is better) Translates to: FTYTSLLQVLNC*GHCLKEYPEIA Trigger: CGCGATCTCTGGATATTCCTTCAAGCAATGCCCTCAGCAATTAAGTACTTGCAGCAAAGATGTGTACGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 72 bp | GAGACAAAGATGTCTCTGAGATTCTTTCGGCCATGCTaGGGAAAAGAATGTGAAGAACAAACAAGTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ETKMSLRFFRPC*GKECEEQTSGV Trigger: CACCCCACTTGTTTGTTCTTCACATTCTTTTCCCAAGCATGGCCGAAAGAATCTCAGAGACATCTTTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CAA 90 bp | ATTCTGTGTGCACTGCGTTTCTATCTCCTTTGGAAGGCAGGCATATaGGCCGCTGAAAATCTGTGTAATTCATGGCTGATTCCAGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ILCALRFYLLWKAGI*AAENLCNSWLIPVL Trigger: TAAAACTGGAATCAGCCATGAATTACACAGATTTTCAGCGGCCAATATGCCTGCCTTCCAAAGGAGATAGAAACGCAGTGCACACAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 72 bp | AAGGAGACAAAGATGTCTCTGAGATTCTTTCGGCCATaGTTGGGAAAAGAATGTGAAGAACAAACAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KETKMSLRFFRP*LGKECEEQTSG Trigger: CCCACTTGTTTGTTCTTCACATTCTTTTCCCAAGCATGGCCGAAAGAATCTCAGAGACATCTTTGTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS GCA 72 bp | TCCCTTGCACGTATCCTTCCCTCCTTCTTTGTAGCCTaGACAGATCATCTTATTGGTTATTTTGTGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLARILPSFFVA*TDHLIGYFVSS Trigger: AGAAGACACAAAATAACCAATAAGATGATCTGTGCAGGCTACAAAGAAGGAGGGAAGGATACGTGCAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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| CDS CCA 72 bp | TTGTCTGACATTCTTCATTTGACACCAATGGAACCTTaGCTTTCTGAAGAGTACTTTGTACTTCACCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LSDILHLTPMEP*LSEEYFVLHLL Trigger: TAAGAGGTGAAGTACAAAGTACTCTTCAGAAAGCCAAGGTTCCATTGGTGTCAAATGAAGAATGTCAGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034064.5 |
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