Pregenerated sensors for EZHIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073294Ensembl transcript IDs: ENSMUST00000101698.4, ENSMUST00000117544.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGATAATCACACAACCAACAGGGGATACGTGCCAATTCCTTTTCTaGACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: EIITQPTGDTCQFLF*TWENPHNELQQGQS Trigger: ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACGTATCCCCTGTTGGTTGTGTGATTATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| 3UTR GCA 72 bp | ACACAACCAACAGGGGATACGTGCCAATTCCTTTTCTaGACCTGGGAGAACCCTCACAATGAATTACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: TQPTGDTCQFLF*TWENPHNELQQ Trigger: TTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACGTATCCCCTGTTGGTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGACGCAGCGCGCTGCCTaGCCCCGAGGGACCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRTQRAA*PRGTTS Trigger: CGAGGTGGTCCCTCGGGGGCAGGCAGCGCGCTGCGT...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGACCACCTCGGCCTCTaGGCCCCGAAGGCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRDHLGL*APKAPE Trigger: CTCCGGGGCCTTCGGGGCCCAGAGGCCGAGGTGGTC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTACGCAGCGCGCTGCCTaGCCCCGAGGGACCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSTQRAA*PRGTTS Trigger: CGAGGTGGTCCCTCGGGGGCAGGCAGCGCGCTGCGT...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTGACCACCTCGGCCTCTaGGCCCCGAAGGCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSDHLGL*APKAPE Trigger: CTCCGGGGCCTTCGGGGCCCAGAGGCCGAGGTGGTC...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGCTACTGCTCTTGGTGTaGGGCGGGGAGCCGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRLLLLV*GGEPLP Trigger: CGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAG...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGCTTCGGGGGTCCCGCTaGCTCTGGGATCAGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRLRGSR*LWDQDH Trigger: GTGGTCCTGATCCCAGAGGCAGCGGGACCCCCGAAG...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGACTCGTCAGTGTCTCTaGGCGCCTCCAGCCCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRTRQCL*APPAPS Trigger: AGAGGGGGCTGGAGGCGCTCAGAGACACTGACGAGT...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTAGACCCCGAGCCCTGTaGGGTGGAGCTCCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSRPRAL*GGAPEG Trigger: ACCCTCAGGAGCTCCACCTCACAGGGCTCGGGGTCT...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGAGACCCCGAGCCCTGTaGGGTGGAGCTCCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKRPRAL*GGAPEG Trigger: ACCCTCAGGAGCTCCACCTCACAGGGCTCGGGGTCT...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGGCGAGCTTCAGGGCTaGCCACTGATGCACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRGELQG*PLMHCS Trigger: GGAGCAGTGCATCAGTGGTCAGCCCTGAAGCTCGCC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGCTTCGGGGGTCCCGCTaGCTCTGGGATCAGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKLRGSR*LWDQDH Trigger: GTGGTCCTGATCCCAGAGGCAGCGGGACCCCCGAAG...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGCTCGGCCAGCAGGGCTaGACTGGTCACTCTCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKLGQQG*TGHSRH Trigger: GTGCCGAGAGTGACCAGTCCAGCCCTGCTGGCCGAG...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGACTCGTCAGTGTCTCTaGGCGCCTCCAGCCCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKTRQCL*APPAPS Trigger: AGAGGGGGCTGGAGGCGCTCAGAGACACTGACGAGT...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGTTCCAGCCTGTGCACTaGGCTTCGGGGCGAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRFQPVH*ASGRTS Trigger: AGAGGTTCGCCCCGAAGCCCAGTGCACAGGCTGGAA...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGACGAACTGGGCGCCTTaGAGGAGAGTCTTCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRTNWAP*RRVFGC Trigger: GCAGCCGAAGACTCTCCTCCAAGGCGCCCAGTTCGT...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGAGGACGTAAATTCCTaGCTGCGCTCTGGGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVREDVNS*LRSGLP Trigger: CGGAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTCTCCAGCCCCCTCTCTaGAGACGAAGAGCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSLQPPL*RRRAGH Trigger: ATGGCCAGCTCTTCGTCTCCAGAGAGGGGGCTGGAG...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGCTCCAGCCCCCTCTCTaGAGACGAAGAGCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKLQPPL*RRRAGH Trigger: ATGGCCAGCTCTTCGTCTCCAGAGAGGGGGCTGGAG...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTGCTAGGGCCAGGTTCTaGCTCCAGCTCTTGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSARARF*LQLLLF Trigger: GAAGAGCAAGAGCTGGAGTCAGAACCTGGCCCTAGC...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGTAAATTCCAGCCTGTaGACTGGGCTTCGGGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRVNSSL*TGLRGE Trigger: TTCGCCCCGAAGCCCAGTGCACAGGCTGGAATTTAC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGAGGACGTAAATTCCTaGCTGCGCTCTGGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVREDVNS*LRSGLW Trigger: CCAAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGACGAGTGTGAGGGGCTaGCTCTATTTCTTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRTSVRG*LYFFPW Trigger: CCAGGGGAAGAAATAGAGGCAGCCCCTCACACTCGT...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGACCTCGTGGTACTGCTaGGAGCAACAGGAACTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRTSWYC*EQQELV Trigger: CACGAGTTCCTGTTGCTCCCAGCAGTACCACGAGGT...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGTCTTTCTACTGCTCTTaGTGTGAGGCGGGGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKSFYCS*CEAGSR Trigger: GCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGA...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTGGACTCACTGGAAGATaGGGAGGGAGAATGGACACC | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSGLTGR*GGRMDT Trigger: GGTGTCCATTCTCCCTCCTCATCTTCCAGTGAGTCC...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGACTCACTGGAAGATaGGGAGGGAGAATGGACACC | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKGLTGR*GGRMDT Trigger: GGTGTCCATTCTCCCTCCTCATCTTCCAGTGAGTCC...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGGAGCCTGGATCTGGTaGCTTATTGAGGGGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRGAWIW*LIEGRM Trigger: CATTCTCCCCTCAATAAGGCACCAGATCCAGGCTCC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTACCTCGTGGTACTGCTaGGAGCAACAGGAACTCGTG | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSTSWYC*EQQELV Trigger: CACGAGTTCCTGTTGCTCCCAGCAGTACCACGAGGT...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGTGCCTCTATCAGAACTaGACCTCGTGGTACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRCLYQN*TSWYCW Trigger: CCAGCAGTACCACGAGGTCCAGTTCTGATAGAGGCA...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGCTTCCCCTGGCACTCTaGGAGAGGAAGAATCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRLPLAL*ERKNQG Trigger: ACCTTGATTCTTCCTCTCCCAGAGTGCCAGGGGAAG...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTAGAGAAGACTCTGGCTaGGGCATAGCAGGAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSREDSG*GIAGDP Trigger: AGGGTCTCCTGCTATGCCCCAGCCAGAGTCTTCTCT...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTGCTCAGAGAAGACTCTaGCTGGGGCATAGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSAQRRL*LGHSRR Trigger: TCTCCTGCTATGCCCCAGCCAGAGTCTTCTCTGAGC...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGATCTGGTGCCTTATTaGGGGGAGAATGGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRDLVPY*GENGNL Trigger: CAAGTTCCCATTCTCCCCTCAATAAGGCACCAGATC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGTCTGACTCCAGCTCTTaGTCTTCTTGCTCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKSDSSS*SSCSAS Trigger: GGAGGCAGAGCAAGAAGAGCAAGAGCTGGAGTCAGA...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTGGAGCCTGGATCTGGTaGCTTATTGAGGGGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSGAWIW*LIEGRM Trigger: CATTCTCCCCTCAATAAGGCACCAGATCCAGGCTCC...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGTGCCTCTATCAGAACTaGACCTCGTGGTACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKCLYQN*TSWYCW Trigger: CCAGCAGTACCACGAGGTCCAGTTCTGATAGAGGCA...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGCACTGGAGGACTCACTaGAAGATGAGGAGGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRHWRTH*KMRREN Trigger: ATTCTCCCTCCTCATCTTCCAGTGAGTCCTCCAGTG...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTCTTCCCCTGGCACTCTaGGAGAGGAAGAATCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSLPLAL*ERKNQG Trigger: ACCTTGATTCTTCCTCTCCCAGAGTGCCAGGGGAAG...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTGATCTGGTGCCTTATTaGGGGGAGAATGGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSDLVPY*GENGNL Trigger: CAAGTTCCCATTCTCCCCTCAATAAGGCACCAGATC...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTCACTGGAGGACTCACTaGAAGATGAGGAGGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSHWRTH*KMRREN Trigger: ATTCTCCCTCCTCATCTTCCAGTGAGTCCTCCAGTG...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGGGAACTTGAAACACTaGAGGACTCACTGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRGNLKH*RTHWKM Trigger: CATCTTCCAGTGAGTCCTCCAGTGTTTCAAGTTCCC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS-3UTR CCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGCTCTATTTCTTCCCCTaGCACTCTGGGAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKLYFFP*HSGRGR Trigger: TCTTCCTCTCCCAGAGTGCCAGGGGAAGAAATAGAG...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTCTCTATTTCTTCCCCTaGCACTCTGGGAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSLYFFP*HSGRGR Trigger: TCTTCCTCTCCCAGAGTGCCAGGGGAAGAAATAGAG...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTTCAAAATGGTGGCTTTaGTCAGGCCTAGGGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSSKWWL*SGLGLR Trigger: TCTGAGCCCTAGGCCTGACCAAAGCCACCATTTTGA...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTGGGAACTTGAAACACTaGAGGACTCACTGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSGNLKH*RTHWKM Trigger: CATCTTCCAGTGAGTCCTCCAGTGTTTCAAGTTCCC...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGTTATTGAGGGGAGAATaGGAACTTGAAACACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWENPHNELQQGQSMAVRLLRGE*ELETLE Trigger: CTCCAGTGTTTCAAGTTCCCATTCTCCCCTCAATAA...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTCTTCAAAATAGTGCTTaGGCAAAGGATAGAGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSLQNSA*AKDRAY Trigger: GTAGGCTCTATCCTTTGCCCAAGCACTATTTTGAAG...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CCA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGTTATTGAGGGGAGAATaGGAACTTGAAACACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RANSFSAPGRTLTMNYSKLLRGE*ELETLE Trigger: CTCCAGTGTTTCAAGTTCCCATTCTCCCCTCAATAA...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTACTGGAAAATCAAAATaGTGGCTTTGGTCAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLFCTWENPHNELQQGQSTGKSK*WLWSGL Trigger: TAGGCCTGACCAAAGCCACCATTTTGATTTTCCAGT...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS TCA 90 bp | TCCCAGGCTCAGAAAATGTCCCCAGGTCCTCACCGGCCGTGGAGGTaGCGCAGGCCGCCGCCATTTCGGCTTCGAGGCTCCGGAGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQAQKMSPGPHRPWR*RRPPPFRLRGSGDA Trigger: TGCGTCTCCGGAGCCTCGAAGCCGAAATGGCGGCGGCCTGCGTCACCTCCACGGCCGGTGAGGACCTGGGGACATTTTCTGAGCCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS GCA 90 bp | TACGGCTCCGTTGATGGTCAGAGCCGAGCCTGGGTGTACTGCAGCTaGGGCTTCGGCTCCGGCTCCGTGGGGCACGGCTGCTGCCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: YGSVDGQSRAWVYCS*GFGSGSVGHGCCLY Trigger: ATAGAGGCAGCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGCTCTGACCATCAACGGAGCCGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 90 bp | GCCGAGCCTGGGTGTACTGCAGCTGCGGCTTCGGCTCCGGCTCCGTaGGGCACGGCTGCTGCCTCTATCAGAACTGGACCTCGTGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: AEPGCTAAAASAPAP*GTAAASIRTGPRGT Trigger: AGTACCACGAGGTCCAGTTCTGATAGAGGCAGCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS TCA 90 bp | CTCCGGTTGGGGTTGGGCTGCTCCCTCTTTCTACTGCTCTTGGTGTaGGGCGGGGAGCCGCTGCCGCCTTTCCTGCCTTTCCCGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLGLGCSLFLLLLV*GGEPLPPFLPFPPW Trigger: CCAAGGCGGGAAAGGCAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGAGGGAGCAGCCCAACCCCAACCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS GCA 90 bp | TACTGCAGCTGCGGCTTCGGCTCCGGCTCCGTGGGGCACGGCTGCTaGCTCTATCAGAACTGGACCTCGTGGTACTGCTGGGAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: YCSCGFGSGSVGHGC*LYQNWTSWYCWEQQ Trigger: CTGTTGCTCCCAGCAGTACCACGAGGTCCAGTTCTGATAGAGGCAGCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 90 bp | GTGTACTGCAGCTGCGGCTTCGGCTCCGGCTCCGTGGGGCACGGCTaGTGCCTCTATCAGAACTGGACCTCGTGGTACTGCTGGGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VYCSCGFGSGSVGHG*CLYQNWTSWYCWEQ Trigger: TTGCTCCCAGCAGTACCACGAGGTCCAGTTCTGATAGAGGCAGCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 90 bp | TTATTTTACGGCTCCGTTGATGGTCAGAGCCGAGCCTGGGTGTACTaGAGCTGCGGCTTCGGCTCCGGCTCCGTGGGGCACGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFYGSVDGQSRAWVY*SCGFGSGSVGHGCC Trigger: GCAGCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGCTCTGACCATCAACGGAGCCGTAAAATAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 90 bp | GGGCCATTAGGCTCCGGTTGGGGTTGGGCTGCTCCCTCTTTCTACTaGTCTTGGTGTGAGGCGGGGAGCCGCTGCCGCCTTTCCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPLGSGWGWAAPSFY*SWCEAGSRCRLSCL Trigger: AAGGCAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGAGGGAGCAGCCCAACCCCAACCGGAGCCTAATGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS CCA 90 bp | TTAGGCTCCGGTTGGGGTTGGGCTGCTCCCTCTTTCTACTGCTCTTaGTGTGAGGCGGGGAGCCGCTGCCGCCTTTCCTGCCTTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSGWGWAAPSFYCS*CEAGSRCRLSCLSR Trigger: GCGGGAAAGGCAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGAGGGAGCAGCCCAACCCCAACCGGAGCCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS TCA 90 bp | CCAAGTTCTAGGTCTGGGCCACCGCCACCCTCAGGGTCGCCATGTTaGCTCCCAGGCTCAGAAAATGTCCCCAGGTCCTCACCGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSRSGPPPPSGSPC*LPGSENVPRSSPAV Trigger: CACGGCCGGTGAGGACCTGGGGACATTTTCTGAGCCTGGGAGTCAACATGGCGACCCTGAGGGTGGCGGTGGCCCAGACCTAGAACTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS GCA 90 bp | CTCGCTTGCGGCCGGCTGCTAGGGCCAGGTTCTGACTCCAGCTCTTaGTCTTCTTGCTCTGCCTCCGATTCCGGCTCACGGTCCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LACGRLLGPGSDSSS*SSCSASDSGSRSTC Trigger: GCAAGTGGACCGTGAGCCGGAATCGGAGGCAGAGCAAGAAGAGCAAGAGCTGGAGTCAGAACCTGGCCCTAGCAGCCGGCCGCAAGCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 90 bp | CGCCGCCTTTCGGGGTCAGGCCGAGCTCTCTCTGGCTTCTCATCATaGGCCTTGCATGTCCAAGTTCTAGGTCTGGGCCACCGCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRLSGSGRALSGFSS*ALHVQVLGLGHRHP Trigger: AGGGTGGCGGTGGCCCAGACCTAGAACTTGGACATGCAAGGCCCATGATGAGAAGCCAGAGAGAGCTCGGCCTGACCCCGAAAGGCGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS TCA 90 bp | CCATCACCGTCATCATCATCATCGGGAGCCCGTGGACTGGCCTGTTaGCGCAGTTCTCGGCCAGCAGGGCTGGACTGGTCACTCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPSSSSSGARGLAC*RSSRPAGLDWSLSA Trigger: TGCCGAGAGTGACCAGTCCAGCCCTGCTGGCCGAGAACTGCGTCAACAGGCCAGTCCACGGGCTCCCGATGATGATGATGACGGTGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 90 bp | GAGGATCTCCCTGGGACTGCAAACCTAGAGGAGGAACGGCTCGCTTaGGGCCGGCTGCTAGGGCCAGGTTCTGACTCCAGCTCTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EDLPGTANLEEERLA*GRLLGPGSDSSSCS Trigger: AGAGCAAGAGCTGGAGTCAGAACCTGGCCCTAGCAGCCGGCCGCAAGCGAGCCGTTCCTCCTCTAGGTTTGCAGTCCCAGGGAGATCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 90 bp | GCCTCATCTTTATTTTACGGCTCCGTTGATGGTCAGAGCCGAGCCTaGGTGTACTGCAGCTGCGGCTTCGGCTCCGGCTCCGTGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLFYGSVDGQSRA*VYCSCGFGSGSVGH Trigger: GTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGCTCTGACCATCAACGGAGCCGTAAAATAAAGATGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 90 bp | GATGCACTGCTCCGAGGACGAGGACGTAAATTCCTGCCTGCGCTCTaGGCTTTGGGGCGAGCTTCAGGGCTGACCACTGATGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DALLRGRGRKFLPAL*ALGRASGLTTDALL Trigger: GAGCAGTGCATCAGTGGTCAGCCCTGAAGCTCGCCCCAAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTCGTCCTCGGAGCAGTGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 90 bp | ATCAAAATGGTGGCTTTGGTCAGGCCTAGGGCTCAGAGAAGACTCTaGCTGGGGCATAGCAGGAGACCCTCGAGCTCCGGGAAGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKMVALVRPRAQRRL*LGHSRRPSSSGKRR Trigger: CCTCCGCTTCCCGGAGCTCGAGGGTCTCCTGCTATGCCCCAGCCAGAGTCTTCTCTGAGCCCTAGGCCTGACCAAAGCCACCATTTTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGTACGAACTGGGCGCCTaGGAGGAGAGTCTTCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWENPHNELQQGQSMAVRYELGA*EESLRL Trigger: CAGCCGAAGACTCTCCTCCAAGGCGCCCAGTTCGTA...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTTACGAACTGGGCGCCTaGGAGGAGAGTCTTCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFCTWENPHNELQQGQSYELGA*EESLRL Trigger: CAGCCGAAGACTCTCCTCCAAGGCGCCCAGTTCGTA...ACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 90 bp | CACTGGAAGATGAGGAGGGAGAATGGACACCTTCAAAATAGTGCTTaGGCAAAGGATAGAGCCTACCAGGAGGAGAAGGGGAAGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HWKMRRENGHLQNSA*AKDRAYQEEKGKRL Trigger: GAGCCTCTTCCCCTTCTCCTCCTGGTAGGCTCTATCCTTTGCCCAAGCACTATTTTGAAGGTGTCCATTCTCCCTCCTCATCTTCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS TCA 90 bp | AGAGAGAGCTTAATGGAGGTGAGGAGCCTGGATCTGGTGCCTTATTaGGGGGAGAATGGGAACTTGAAACACTGGAGGACTCACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RESLMEVRSLDLVPY*GENGNLKHWRTHWK Trigger: CTTCCAGTGAGTCCTCCAGTGTTTCAAGTTCCCATTCTCCCCTCAATAAGGCACCAGATCCAGGCTCCTCACCTCCATTAAGCTCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGCAGAGTATGGCAGTAAGGGGATCTGGTGCCTTATaGAGGGGAGAATGGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: TWENPHNELQQGQSMAVRGSGAL*RGEWEL Trigger: AAGTTCCCATTCTCCCCTCAATAAGGCACCAGATCC...CCTTACTGCCATACTCTGCCCTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CAA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGATCAAAATGGTGGCTTaGGTCAGGCCTAGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RANSFSAPGRTLTMNYSKIKMVA*VRPRAQ Trigger: CTGAGCCCTAGGCCTGACCAAAGCCACCATTTTGAT...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS-3UTR CAA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGGGATCTGGTGCCTTATaGAGGGGAGAATGGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RANSFSAPGRTLTMNYSKGSGAL*RGEWEL Trigger: AAGTTCCCATTCTCCCCTCAATAAGGCACCAGATCC...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS-3UTR CAA 90 bp | CGTGCCAATTCCTTTTCTGCACCTGGGAGAACCCTCACAATGAATTACAGCAAGTTCTCATCATGGGCCTaGCATGTCCAAGTTCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RANSFSAPGRTLTMNYSKFSSWA*HVQVLG Trigger: ACCTAGAACTTGGACATGCAAGGCCCATGATGAGAA...CTTGCTGTAATTCATTGTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | TTCGGCTTCGAGGCTCCGGAGACGCAGCGCGCTGCCTaGCCCCGAGGGACCACCTCGGCCTCTGGGCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: FGFEAPETQRAA*PRGTTSASGPR Trigger: TCGGGGCCCAGAGGCCGAGGTGGTCCCTCGGGGGCAGGCAGCGCGCTGCGTCTCCGGAGCCTCGAAGCCGAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 72 bp | GGCCAGCAGGGCTGGACTGGTCACTCTCGGCACGGCTaGACTCGGCACAGCGGAGGGCCTCGGGGACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQQGWTGHSRHG*TRHSGGPRGLE Trigger: CTCCAGTCCCCGAGGCCCTCCGCTGTGCCGAGTCCAGCCGTGCCGAGAGTGACCAGTCCAGCCCTGCTGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS CCA 72 bp | GGGGAGCCGCTGCCGCCTTTCCTGCCTTTCCCGCCTTaGTCGGCTTTCCCGCCGCCTTTCGGGGTCAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GEPLPPFLPFPP*SAFPPPFGVRP Trigger: CGGCCTGACCCCGAAAGGCGGCGGGAAAGCCGACCAAGGCGGGAAAGGCAGGAAAGGCGGCAGCGGCTCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS CAA 72 bp | CGGGGAGCCGCTGCCGCCTTTCCTGCCTTTCCCGCCTaGGTCGGCTTTCCCGCCGCCTTTCGGGGTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGAAAAFPAFPA*VGFPAAFRGQA Trigger: GGCCTGACCCCGAAAGGCGGCGGGAAAGCCGACCAAGGCGGGAAAGGCAGGAAAGGCGGCAGCGGCTCCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS CCA 72 bp | CCTCGAGCTCCGGGAAGCGGAGGCCCGGCTGCACCTTaGGCCATTAGGCTCCGGTTGGGGTTGGGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRAPGSGGPAAP*AIRLRLGLGCS Trigger: GGAGCAGCCCAACCCCAACCGGAGCCTAATGGCCCAAGGTGCAGCCGGGCCTCCGCTTCCCGGAGCTCGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | GTTGATGGTCAGAGCCGAGCCTGGGTGTACTGCAGCTaGGGCTTCGGCTCCGGCTCCGTGGGGCACGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VDGQSRAWVYCS*GFGSGSVGHGC Trigger: GCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGCTCTGACCATCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | GGCTCCGTTGATGGTCAGAGCCGAGCCTGGGTGTACTaGAGCTGCGGCTTCGGCTCCGGCTCCGTGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSVDGQSRAWVY*SCGFGSGSVGH Trigger: GTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGCTCTGACCATCAACGGAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | TCTTGGTGTGAGGCGGGGAGCCGCTGCCGCCTTTCCTaGCTTTCCCGCCTTGGTCGGCTTTCCCGCCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SWCEAGSRCRLS*LSRLGRLSRRL Trigger: AAGGCGGCGGGAAAGCCGACCAAGGCGGGAAAGGCAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS TCA 72 bp | CAGAAAATGTCCCCAGGTCCTCACCGGCCGTGGAGGTaGCGCAGGCCGCCGCCATTTCGGCTTCGAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QKMSPGPHRPWR*RRPPPFRLRGS Trigger: GGAGCCTCGAAGCCGAAATGGCGGCGGCCTGCGTCACCTCCACGGCCGGTGAGGACCTGGGGACATTTTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | CAGGAACTCGTGGAGTGGCCCGAGGACGTAAATTCCTaGCTGCGCTCTGGGCTTCCGGGCGAGCTTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QELVEWPEDVNS*LRSGLPGELRG Trigger: GCCCCGAAGCTCGCCCGGAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTCGGGCCACTCCACGAGTTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | TGCGGCTTCGGCTCCGGCTCCGTGGGGCACGGCTGCTaGCTCTATCAGAACTGGACCTCGTGGTACTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CGFGSGSVGHGC*LYQNWTSWYCW Trigger: CCAGCAGTACCACGAGGTCCAGTTCTGATAGAGGCAGCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | AGCTGCGGCTTCGGCTCCGGCTCCGTGGGGCACGGCTaGTGCCTCTATCAGAACTGGACCTCGTGGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCGFGSGSVGHG*CLYQNWTSWYC Trigger: GCAGTACCACGAGGTCCAGTTCTGATAGAGGCAGCAGCCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
||
| CDS GCA 72 bp | GGCTCCGGTTGGGGTTGGGCTGCTCCCTCTTTCTACTaGTCTTGGTGTGAGGCGGGGAGCCGCTGCCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GSGWGWAAPSFY*SWCEAGSRCRL Trigger: AAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGAGGGAGCAGCCCAACCCCAACCGGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS GCA 72 bp | CTCCGGAACGGAGGACCCAGCCTTCGGGGGTCCCGCTaGCTCTGGGATCAGGACCACCATCACCGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LRNGGPSLRGSR*LWDQDHHHRHH Trigger: ATGATGACGGTGATGGTGGTCCTGATCCCAGAGGCAGCGGGACCCCCGAAGGCTGGGTCCTCCGTTCCGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CCA 72 bp | GGTTGGGGTTGGGCTGCTCCCTCTTTCTACTGCTCTTaGTGTGAGGCGGGGAGCCGCTGCCGCCTTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GWGWAAPSFYCS*CEAGSRCRLSC Trigger: GCAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGAGGGAGCAGCCCAACCCCAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS TCA 72 bp | GGGTTGGGCTGCTCCCTCTTTCTACTGCTCTTGGTGTaGGGCGGGGAGCCGCTGCCGCCTTTCCTGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GLGCSLFLLLLV*GGEPLPPFLPF Trigger: GAAAGGCAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGAGGGAGCAGCCCAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS GCA 72 bp | GGCCGGCTGCTAGGGCCAGGTTCTGACTCCAGCTCTTaGTCTTCTTGCTCTGCCTCCGATTCCGGCTCACGG | + |
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Preference number: 6 (lower is better) Translates to: GRLLGPGSDSSS*SSCSASDSGSR Trigger: CCGTGAGCCGGAATCGGAGGCAGAGCAAGAAGAGCAAGAGCTGGAGTCAGAACCTGGCCCTAGCAGCCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CCA 72 bp | GTGGCTTTGGTCAGGCCTAGGGCTCAGAGAAGACTCTaGCTGGGGCATAGCAGGAGACCCTCGAGCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VALVRPRAQRRL*LGHSRRPSSSG Trigger: CCCGGAGCTCGAGGGTCTCCTGCTATGCCCCAGCCAGAGTCTTCTCTGAGCCCTAGGCCTGACCAAAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS CAA 90 bp | ACCATCACCGTCATCATCATCATCGGGAGCCCGTGGACTGGCCTGTaGACGCAGTTCTCGGCCAGCAGGGCTGGACTGGTCACTCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: TITVIIIIGSPWTGL*TQFSASRAGLVTLG Trigger: GCCGAGAGTGACCAGTCCAGCCCTGCTGGCCGAGAACTGCGTCAACAGGCCAGTCCACGGGCTCCCGATGATGATGATGACGGTGATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS TCA 72 bp | AGGTCTGGGCCACCGCCACCCTCAGGGTCGCCATGTTaGCTCCCAGGCTCAGAAAATGTCCCCAGGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSGPPPPSGSPC*LPGSENVPRSS Trigger: TGAGGACCTGGGGACATTTTCTGAGCCTGGGAGTCAACATGGCGACCCTGAGGGTGGCGGTGGCCCAGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS GCA 72 bp | CTGATGCACTGCTCCGAGGACGAGGACGTAAATTCCTaGCTGCGCTCTGGGCTTTGGGGCGAGCTTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LMHCSEDEDVNS*LRSGLWGELQG Trigger: GCCCTGAAGCTCGCCCCAAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTCGTCCTCGGAGCAGTGCATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS GCA 72 bp | TCTTTCTACTGCTCTTGGTGTGAGGCGGGGAGCCGCTaGCGCCTTTCCTGCCTTTCCCGCCTTGGTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SFYCSWCEAGSR*RLSCLSRLGRL Trigger: AAGCCGACCAAGGCGGGAAAGGCAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS CCA 72 bp | CATCACCGTCATCATCATCATCGGGAGCCCGTGGACTaGCCTGTTGACGCAGTTCTCGGCCAGCAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: HHRHHHHREPVD*PVDAVLGQQGW Trigger: CCAGCCCTGCTGGCCGAGAACTGCGTCAACAGGCCAGTCCACGGGCTCCCGATGATGATGATGACGGTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CAA 90 bp | CTTTCGGGGTCAGGCCGAGCTCTCTCTGGCTTCTCATCATGGGCCTaGCATGTCCAAGTTCTAGGTCTGGGCCACCGCCACCCTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LSGSGRALSGFSSWA*HVQVLGLGHRHPQG Trigger: ACCCTGAGGGTGGCGGTGGCCCAGACCTAGAACTTGGACATGCAAGGCCCATGATGAGAAGCCAGAGAGAGCTCGGCCTGACCCCGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS CCA 72 bp | CTCCGAGGACGAGGACGTAAATTCCTGCCTGCGCTCTaGGCTTTGGGGCGAGCTTCAGGGCTGACCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: LRGRGRKFLPAL*ALGRASGLTTD Trigger: ATCAGTGGTCAGCCCTGAAGCTCGCCCCAAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTCGTCCTCGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CCA 72 bp | TTATTTTACGGCTCCGTTGATGGTCAGAGCCGAGCCTaGGTGTACTGCAGCTGCGGCTTCGGCTCCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFYGSVDGQSRA*VYCSCGFGSGS Trigger: GGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGCTCTGACCATCAACGGAGCCGTAAAATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CCA 72 bp | TCGGGGTCAGGCCGAGCTCTCTCTGGCTTCTCATCATaGGCCTTGCATGTCCAAGTTCTAGGTCTGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SGSGRALSGFSS*ALHVQVLGLGH Trigger: GTGGCCCAGACCTAGAACTTGGACATGCAAGGCCCATGATGAGAAGCCAGAGAGAGCTCGGCCTGACCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS CAA 72 bp | TCAGGCCGAGCTCTCTCTGGCTTCTCATCATGGGCCTaGCATGTCCAAGTTCTAGGTCTGGGCCACCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SGRALSGFSSWA*HVQVLGLGHRH Trigger: GTGGCGGTGGCCCAGACCTAGAACTTGGACATGCAAGGCCCATGATGAGAAGCCAGAGAGAGCTCGGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117544.2 |
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| CDS CCA 72 bp | TGTGAGGGGCTGCCTCTATTTCTTCCCCTGGCACTCTaGGAGAGGAAGAATCAAGGTTATCCAGGTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: CEGLPLFLPLAL*ERKNQGYPGQL Trigger: TAGCTGACCTGGATAACCTTGATTCTTCCTCTCCCAGAGTGCCAGGGGAAGAAATAGAGGCAGCCCCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CCA 72 bp | TTCACGAGTGTGAGGGGCTGCCTCTATTTCTTCCCCTaGCACTCTGGGAGAGGAAGAATCAAGGTTATCCAG | + |
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Preference number: 6 (lower is better) Translates to: FTSVRGCLYFFP*HSGRGRIKVIQ Trigger: CTGGATAACCTTGATTCTTCCTCTCCCAGAGTGCCAGGGGAAGAAATAGAGGCAGCCCCTCACACTCGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CCA 72 bp | ATGAGGAGGGAGAATGGACACCTTCAAAATAGTGCTTaGGCAAAGGATAGAGCCTACCAGGAGGAGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: MRRENGHLQNSA*AKDRAYQEEKG Trigger: CCCCTTCTCCTCCTGGTAGGCTCTATCCTTTGCCCAAGCACTATTTTGAAGGTGTCCATTCTCCCTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CAA 72 bp | CTTAATGGAGGTGAGGAGCCTGGATCTGGTGCCTTATaGAGGGGAGAATGGGAACTTGAAACACTGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LNGGEEPGSGAL*RGEWELETLED Trigger: GTCCTCCAGTGTTTCAAGTTCCCATTCTCCCCTCAATAAGGCACCAGATCCAGGCTCCTCACCTCCATTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS TCA 72 bp | TTAATGGAGGTGAGGAGCCTGGATCTGGTGCCTTATTaGGGGGAGAATGGGAACTTGAAACACTGGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: LMEVRSLDLVPY*GENGNLKHWRT Trigger: AGTCCTCCAGTGTTTCAAGTTCCCATTCTCCCCTCAATAAGGCACCAGATCCAGGCTCCTCACCTCCATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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| CDS CCA 72 bp | GGGGAGAATGGGAACTTGAAACACTGGAGGACTCACTaGAAGATGAGGAGGGAGAATGGACACCTTCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: GENGNLKHWRTH*KMRRENGHLQN Trigger: ATTTTGAAGGTGTCCATTCTCCCTCCTCATCTTCCAGTGAGTCCTCCAGTGTTTCAAGTTCCCATTCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101698.4 ENSMUST00000117544.2 |
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