RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXTL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021978

Ensembl transcript IDs: ENSMUST00000022550.8, ENSMUST00000225633.2

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTaGGGGTCTCCCGGGGGCCATGCCAGCCCTACGGCAGGAGGGATC +
Preference number: 1 (lower is better)
Translates to: PEDPVKFCSSLVLLA*GSPGGHASPTAGGI
Trigger: GATCCCTCCTGCCGTAGGGCTGGCATGGCCCCCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp CTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGGGGCCATaGCAGCCCTACGGCAGGAGGGATCTAGAGAGAAGTCAGGACAGC +
Preference number: 1 (lower is better)
Translates to: LQQPGPAGLRVSRGP*QPYGRRDLERSQDS
Trigger: GCTGTCCTGACTTCTCTCTAGATCCCTCCTGCCGTAGGGCTGGCATGGCCCCCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 90 bp GTGCAGCCTACAGCGGGGCAAGCTGTGGGAGCAGCACTGTGGCATTaGAACGGGGCCAGGAGAGGTCAGGAGACCCTGCCTAGGTCAGGC +
Preference number: 1 (lower is better)
Translates to: VQPTAGQAVGAALWH*NGARRGQETLPRSG
Trigger: GCCTGACCTAGGCAGGGTCTCCTGACCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTGCTCCCACAGCTTGCCCCGCTGTAGGCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 90 bp CCCACTGTGCAGCCTACAGCGGGGCAAGCTGTGGGAGCAGCACTGTaGCATTGGAACGGGGCCAGGAGAGGTCAGGAGACCCTGCCTAGG +
Preference number: 1 (lower is better)
Translates to: PTVQPTAGQAVGAAL*HWNGARRGQETLPR
Trigger: CCTAGGCAGGGTCTCCTGACCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTGCTCCCACAGCTTGCCCCGCTGTAGGCTGCACAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 90 bp CAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCAGAAGACCCAGTaGAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCG +
Preference number: 1 (lower is better)
Translates to: QMSQAALGVRFQKTQ*SSAAAWSCWPEGLP
Trigger: CGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGAACCTGACACCAAGGGCTGCCTGGGACATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 90 bp CGCCGAGCTCCCAGCCAGCCTGCCAAGTTCCTGTTGTCTCCTCTGTaGGAAACAAGTACCACGGAACTGGCCACCAGCACCCTGCACCAG +
Preference number: 1 (lower is better)
Translates to: RRAPSQPAKFLLSPL*ETSTTELATSTLHQ
Trigger: CTGGTGCAGGGTGCTGGTGGCCAGTTCCGTGGTACTTGTTTCTCACAGAGGAGACAACAGGAACTTGGCAGGCTGGCTGGGAGCTCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp CAGCACTGTGGCATTGGAACGGGGCCAGGAGAGGTCAGGAGACCCTaGCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCAGTGTCCC +
Preference number: 1 (lower is better)
Translates to: QHCGIGTGPGEVRRP*LGQAHPAYFCSQCP
Trigger: GGGACACTGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 90 bp ACGTGTCAGGGCCTAGGAAGACGGAACTGGCTTAAGGCAGGTGCATaGCCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: TCQGLGRRNWLKAGA*PRQTELCVSCWGWG
Trigger: TCCCCAGCCCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCCAGTTCCGTCTTCCTAGGCCCTGACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp GAAGGACCCAGGCTGGCTCTACACCCGCCGAGCTCCCAGCCAGCCTaGCAAGTTCCTGTTGTCTCCTCTGTGAGAAACAAGTACCACGGA +
Preference number: 1 (lower is better)
Translates to: EGPRLALHPPSSQPA*QVPVVSSVRNKYHG
Trigger: TCCGTGGTACTTGTTTCTCACAGAGGAGACAACAGGAACTTGGCAGGCTGGCTGGGAGCTCGGCGGGTGTAGAGCCAGCCTGGGTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 90 bp CTATCCCTTTCCACTCTTCCTGCTGCCTCTCCCAGCAAAGGGTCTTaGCCCTGCCCGACAGATGTCCCCAAGGACCTTCGACACCTTGGG +
Preference number: 1 (lower is better)
Translates to: LSLSTLPAASPSKGS*PCPTDVPKDLRHLG
Trigger: CCCAAGGTGTCGAAGGTCCTTGGGGACATCTGTCGGGCAGGGCCAAGACCCTTTGCTGGGAGAGGCAGCAGGAAGAGTGGAAAGGGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp CTTTCCACTCTTCCTGCTGCCTCTCCCAGCAAAGGGTCTTGGCCCTaGCCGACAGATGTCCCCAAGGACCTTCGACACCTTGGGAACCTT +
Preference number: 1 (lower is better)
Translates to: LSTLPAASPSKGSWP*PTDVPKDLRHLGNL
Trigger: AAGGTTCCCAAGGTGTCGAAGGTCCTTGGGGACATCTGTCGGGCAGGGCCAAGACCCTTTGCTGGGAGAGGCAGCAGGAAGAGTGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp GGGCTTATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTaGAGACGCCCTGAGTCTGCTGACCAGGATCCCAGGCCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: GLMNSPQCSLSVSAL*RRPESADQDPRPSV
Trigger: CACACTGGGCCTGGGATCCTGGTCAGCAGACTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCATAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp CTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGTaGGGCCTGGCCCAACCCTTCAAAGCGTCCGGGGTGTGTCGTCCC +
Preference number: 1 (lower is better)
Translates to: LSQTQERMESQVMPE*GLAQPFKASGVCRP
Trigger: GGGACGACACACCCCGGACGCTTTGAAGGGTTGGGCCAGGCCGCACTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 90 bp ACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTaGTGTCAGGTTCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTG +
Preference number: 1 (lower is better)
Translates to: TPSLSCQEPDVPGSP*CQVPEDPVKFCSSL
Trigger: CAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp GAGAGGACAGAAGGTTGGGAAACAGTCTTGACCCCTTCACTGAGTTaGCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCA +
Preference number: 1 (lower is better)
Translates to: ERTEGWETVLTPSLS*QEPDVPGSPWCQVP
Trigger: TGGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTCAAGACTGTTTCCCAACCTTCTGTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 90 bp AACCCCAAAACCCAAATCACAAGCAGGGTCCAACTGCTTTGTCTCTaGCTCTTGCCTCTGACAAGAGTCCCTCAGGTACAGTCACTGCCA +
Preference number: 1 (lower is better)
Translates to: NPKTQITSRVQLLCL*LLPLTRVPQVQSLP
Trigger: TGGCAGTGACTGTACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTGCTTGTGATTTGGGTTTTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 90 bp GGGAAGAGGGCTACTGCTACAAGGGCTGATGAGAGGACAGAAGGTTaGGAAACAGTCTTGACCCCTTCACTGAGTTGCCAAGAACCAGAT +
Preference number: 1 (lower is better)
Translates to: GKRATATRADERTEG*ETVLTPSLSCQEPD
Trigger: ATCTGGTTCTTGGCAACTCAGTGAAGGGGTCAAGACTGTTTCCCAACCTTCTGTCCTCTCATCAGCCCTTGTAGCAGTAGCCCTCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 90 bp TACAGCCAACGTGGCATCAGGGGTCTAAAGCCCACAGCTACAGGATaGACTTCTAGACACAAGAGGGAAGGTGAATTTCACTTCGGTGTT +
Preference number: 1 (lower is better)
Translates to: YSQRGIRGLKPTATG*TSRHKREGEFHFGV
Trigger: AACACCGAAGTGAAATTCACCTTCCCTCTTGTGTCTAGAAGTCCATCCTGTAGCTGTGGGCTTTAGACCCCTGATGCCACGTTGGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 90 bp TGGGAAGAAAACCATCAACAGGACATGGAAAGTGGTAACGTGGGGTaGATTCCTGTTAACGTCTACGACAAGACTAGGACTTACCTAGCA +
Preference number: 1 (lower is better)
Translates to: WEENHQQDMESGNVG*IPVNVYDKTRTYLA
Trigger: TGCTAGGTAAGTCCTAGTCTTGTCGTAGACGTTAACAGGAATTCACCCCACGTTACCACTTTCCATGTCCTGTTGATGGTTTTCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGCTGGTCCTGCTGGCCTaGGGGTCTCCCGGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWLVLLA*GSPGGH
Trigger: ATGGCCCCCGGGAGACCCTCAGGCCAGCAGGACCAG...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGCTCTGCGTCAGCTGCTaGGGCTGGGGAGACAAGTCA +
Preference number: 2 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRLCVSC*GWGDKS
Trigger: TGACTTGTCTCCCCAGCCCCAGCAGCTGACGCAGAG...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 90 bp GGTCTTGGCCCTGCCCGACAGATGTCCCCAAGGACCTTCGACACCTaGGGAACCTTGAGGGTGACTCCCCTCGCTCTGCTCATCGTCTCC +
Preference number: 2 (lower is better)
Translates to: GLGPARQMSPRTFDT*GTLRVTPLALLIVS
Trigger: GGAGACGATGAGCAGAGCGAGGGGAGTCACCCTCAAGGTTCCCAAGGTGTCGAAGGTCCTTGGGGACATCTGTCGGGCAGGGCCAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTGCAGCAGCCTGGTCCTaGTGGCCTGAGGGTCTCCCG +
Preference number: 2 (lower is better)
Translates to: QGPTALSLPLASDKSPSGAAAWS*WPEGLP
Trigger: CGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGC...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCCAGCGGGGCAAGCTGTaGGAGCAGCACTGTGGCATT +
Preference number: 2 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVQRGKL*EQHCGI
Trigger: AATGCCACAGTGCTGCTCCCACAGCTTGCCCCGCTG...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 90 bp CCTGCCCGACAGATGTCCCCAAGGACCTTCGACACCTTGGGAACCTaGAGGGTGACTCCCCTCGCTCTGCTCATCGTCTCCTCAGAACTG +
Preference number: 2 (lower is better)
Translates to: PARQMSPRTFDTLGT*RVTPLALLIVSSEL
Trigger: CAGTTCTGAGGAGACGATGAGCAGAGCGAGGGGAGTCACCCTCAAGGTTCCCAAGGTGTCGAAGGTCCTTGGGGACATCTGTCGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGCAGCGGGGCAAGCTGTaGGAGCAGCACTGTGGCATT +
Preference number: 2 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGQRGKL*EQHCGI
Trigger: AATGCCACAGTGCTGCTCCCACAGCTTGCCCCGCTG...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACATGCCTGAGTGCGGCCTaGCCCAACCCTTCAAAGCGT +
Preference number: 2 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTCLSAA*PNPSKR
Trigger: ACGCTTTGAAGGGTTGGGCCAGGCCGCACTCAGGCA...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACAAGTTCTGCAGCAGCCTaGTCCTGCTGGCCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTSSAAA*SCWPEG
Trigger: ACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACT...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTCAGGTGATGCCTGAGTaGGGCCTGGCCCAACCCTTC +
Preference number: 2 (lower is better)
Translates to: QGPTALSLPLASDKSPSGQVMPE*GLAQPF
Trigger: GAAGGGTTGGGCCAGGCCGCACTCAGGCATCACCTG...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTGAGCTCTGCGTCAGCTaGTGGGGCTGGGGAGACAAG +
Preference number: 2 (lower is better)
Translates to: QGPTALSLPLASDKSPSGELCVS*WGWGDK
Trigger: CTTGTCTCCCCAGCCCCAGCAGCTGACGCAGAGCTC...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp TTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCGAGGTCAGGAGACCCTaGCTAGGTCAGGCCCATCCT +
Preference number: 2 (lower is better)
Translates to: FTELPRTRCPRQPLVSGSEVRRP*LGQAHP
Trigger: AGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTC...GGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAAGCTCCCAGCCAGCCTaGCAAGTTCCTGTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSSSQPA*QVPVVS
Trigger: GGAGACAACAGGAACTTGGCAGGCTGGCTGGGAGCT...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTAGACAGACTGAGCTCTaGGTCAGCTGCTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: QGPTALSLPLASDKSPSGRQTEL*VSCWGW
Trigger: CCAGCCCCAGCAGCTGACGCAGAGCTCAGTCTGTCT...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGCTCGTACAGCCAACGTaGCATCAGGGGTCTAAAGCC +
Preference number: 2 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGLVQPT*HQGSKA
Trigger: GGCTTTAGACCCCTGATGCCACGTTGGCTGTACGAG...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTaGGTGTCAGGTTCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: DPFTELPRTRCPRQP*VSGSRRPSEVLQQP
Trigger: AGGCTGCTGCAGAACTTCACTGGGTCTTCTGGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGGAATGGAAAGCCAGGTaGTGCCTGAGTGCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMEWKAR*CLSAAW
Trigger: CCAGGCCGCACTCAGGCATCACCTGGCTTTCCATTC...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACACATCCTGCTTATTTCTaGAGCCAGTGTCCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTHPAYF*SQCPWD
Trigger: GTCCCAGGGACACTGGCTGCAGAAATAAGCAGGATG...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGCTCGTACAGCCAACGTaGCATCAGGGGTCTAAAGCC +
Preference number: 2 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWLVQPT*HQGSKA
Trigger: GGCTTTAGACCCCTGATGCCACGTTGGCTGTACGAG...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCACACAAGAGGGAAGGTaGATTTCACTTCGGTGTTCC +
Preference number: 2 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVTQEGR*ISLRCS
Trigger: GGAACACCGAAGTGAAATTCACCTTCCCTCTTGTGT...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp TTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCCACAGGCCAAATCCCTaGCCTAAGTTTCCCACTGCC +
Preference number: 2 (lower is better)
Translates to: FTELPRTRCPRQPLVSGSHRPNP*PKFPTA
Trigger: GGCAGTGGGAAACTTAGGTCAGGGATTTGGCCTGTG...GGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGAAAGGGTCTTGGCCCTaGCCGACAGATGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMKGSWP*PTDVPK
Trigger: CTTGGGGACATCTGTCGGGCAGGGCCAAGACCCTTT...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCAGCTCCCAGCCAGCCTaGCAAGTTCCTGTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: EEQLENKAVLALELRLGSSSQPA*QVPVVS
Trigger: GGAGACAACAGGAACTTGGCAGGCTGGCTGGGAGCT...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCACCATCAACAGGACATaGAAAGTGGTAACGTGGGGT +
Preference number: 2 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVTINRT*KVVTWG
Trigger: ACCCCACGTTACCACTTTCCATGTCCTGTTGATGGT...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCACAGGCCCAGTGTGGCTaGCTTCAAAATGAAAGACAG +
Preference number: 2 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSQAQCG*LQNERQ
Trigger: CTGTCTTTCATTTTGAAGTCAGCCACACTGGGCCTG...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGCAGGCCCAGTGTGGCTaGCTTCAAAATGAAAGACAG +
Preference number: 2 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWQAQCG*LQNERQ
Trigger: CTGTCTTTCATTTTGAAGTCAGCCACACTGGGCCTG...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCAAAGGGTCTTGGCCCTaGCCGACAGATGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: VYDKTRTYLANHSLRVLAKGSWP*PTDVPK
Trigger: CTTGGGGACATCTGTCGGGCAGGGCCAAGACCCTTT...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGCTCCCTTGGAGAGATTaGCAGAAATTTCAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGLPWRD*QKFQVH
Trigger: GTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAG...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGGCAGCACTGTGGCATTaGAACGGGGCCAGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: RLLLSQTQERMESQVMPEAALWH*NGARRG
Trigger: ACCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTGC...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGGAGAGGACAGAAGGTTaGGAAACAGTCTTGACCCCT +
Preference number: 2 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWERTEG*ETVLTP
Trigger: AGGGGTCAAGACTGTTTCCCAACCTTCTGTCCTCTC...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTGCCAATGTTTGCTGCTaGGGTCCTTCAGTGAGCGTT +
Preference number: 2 (lower is better)
Translates to: QGPTALSLPLASDKSPSGANVCC*GPSVSV
Trigger: AACGCTCACTGAAGGACCCCAGCAGCAAACATTGGC...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 90 bp ACTGCTACAAGGGCTGATGAGAGGACAGAAGGTTGGGAAACAGTCTaGACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: TATRADERTEGWETV*TPSLSCQEPDVPGS
Trigger: GCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTCAAGACTGTTTCCCAACCTTCTGTCCTCTCATCAGCCCTTGTAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGCTGTTGTCTCCTCTGTaGGAAACAAGTACCACGGAA +
Preference number: 2 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWLLSPL*ETSTTE
Trigger: TTCCGTGGTACTTGTTTCTCACAGAGGAGACAACAG...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCCTTAAGGCAGGTGCATaGCCAAGACAGACTGAGCTC +
Preference number: 2 (lower is better)
Translates to: EEQLENKAVLALELRLGSLKAGA*PRQTEL
Trigger: GAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAG...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCCCTTTCCACTCTTCCTaGTGCCTCTCCCAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: VYDKTRTYLANHSLRVLAPFHSS*CLSQQR
Trigger: CCTTTGCTGGGAGAGGCAGCAGGAAGAGTGGAAAGG...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAGGTCAGGCCCATCCTaGTTATTTCTGCAGCCAGTG +
Preference number: 2 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRRSGPS*LFLQPV
Trigger: CACTGGCTGCAGAAATAAGCAGGATGGGCCTGACCT...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCCTCTGCCTCACTGTCTaGCGCCTCCTTCTCTCTCAA +
Preference number: 2 (lower is better)
Translates to: VYDKTRTYLANHSLRVLALCLTV*RLLLSQ
Trigger: TTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAG...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp CTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGCCTTTCCACTCTTCCTaGTGCCTCTCCCAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LTVCRLLLSQTQERMESQPFHSS*CLSQQR
Trigger: CCTTTGCTGGGAGAGGCAGCAGGAAGAGTGGAAAGG...CTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCACCCCTTCACTGAGTTaGCAAGAACCAGATGTCCCA +
Preference number: 2 (lower is better)
Translates to: EEQLENKAVLALELRLGSTPSLS*QEPDVP
Trigger: TGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGT...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp GGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCCCGACCCATGGCTGACTTCAAAATaGAAGACAGCTATCCCTTTC +
Preference number: 2 (lower is better)
Translates to: GRTLPWRDWQKFQVHPDPWLTSK*KTAIPF
Trigger: GAAAGGGATAGCTGTCTTTCATTTTGAAGTCAGCCA...TGGGTCGGGGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR GCA 90 bp CTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGAGGTCAGGCCCATCCTaGTTATTTCTGCAGCCAGTG +
Preference number: 2 (lower is better)
Translates to: LTVCRLLLSQTQERMESQRSGPS*LFLQPV
Trigger: CACTGGCTGCAGAAATAAGCAGGATGGGCCTGACCT...CTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGGGTAGGACCCTCCCTTaGAGAGATTGGCAGAAATTT +
Preference number: 2 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMGRTLP*RDWQKF
Trigger: AAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACC...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCGGTAGGACCCTCCCTTaGAGAGATTGGCAGAAATTT +
Preference number: 2 (lower is better)
Translates to: EEQLENKAVLALELRLGSGRTLP*RDWQKF
Trigger: AAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACC...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCATTTCATTTTCAGCCCTaGGAAGAAAACCATCAACAG +
Preference number: 2 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSFHFQP*EENHQQ
Trigger: CTGTTGATGGTTTTCTTCCCAGGGCTGAAAATGAAA...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 90 bp AAAACCCAAATCACAAGCAGGGTCCAACTGCTTTGTCTCTGCCTCTaGCCTCTGACAAGAGTCCCTCAGGTACAGTCACTGCCAATGTTT +
Preference number: 2 (lower is better)
Translates to: KTQITSRVQLLCLCL*PLTRVPQVQSLPMF
Trigger: AAACATTGGCAGTGACTGTACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTGCTTGTGATTTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCTCCCTTGGAGAGATTaGCAGAAATTTCAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: VCRLLLSQTQERMESQVMLPWRD*QKFQVH
Trigger: GTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAG...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR TCA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTTGGCTGACTTCAAAATaGAAGACAGCTATCCCTTTC +
Preference number: 2 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPWLTSK*KTAIPF
Trigger: GAAAGGGATAGCTGTCTTTCATTTTGAAGTCAGCCA...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 72 bp CCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTaGGGGTCTCCCGGGGGCCATGCCAGCCCTACGGCA +
Preference number: 3 (lower is better)
Translates to: PVKFCSSLVLLA*GSPGGHASPTA
Trigger: TGCCGTAGGGCTGGCATGGCCCCCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 72 bp CCTGGTCCTGCTGGCCTGAGGGTCTCCCGGGGGCCATaGCAGCCCTACGGCAGGAGGGATCTAGAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: PGPAGLRVSRGP*QPYGRRDLERS
Trigger: ACTTCTCTCTAGATCCCTCCTGCCGTAGGGCTGGCATGGCCCCCGGGAGACCCTCAGGCCAGCAGGACCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 72 bp ACAGCGGGGCAAGCTGTGGGAGCAGCACTGTGGCATTaGAACGGGGCCAGGAGAGGTCAGGAGACCCTGCCT +
Preference number: 3 (lower is better)
Translates to: TAGQAVGAALWH*NGARRGQETLP
Trigger: AGGCAGGGTCTCCTGACCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTGCTCCCACAGCTTGCCCCGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 72 bp CAGCCTACAGCGGGGCAAGCTGTGGGAGCAGCACTGTaGCATTGGAACGGGGCCAGGAGAGGTCAGGAGACC +
Preference number: 3 (lower is better)
Translates to: QPTAGQAVGAAL*HWNGARRGQET
Trigger: GGTCTCCTGACCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTGCTCCCACAGCTTGCCCCGCTGTAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CAA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGAGCAGCACTGTGGCATaGGAACGGGGCCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRSSTVA*ERGQER
Trigger: CCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTGCT...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CAA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGGACACCTTGGGAACCTaGAGGGTGACTCCCCTCGCT +
Preference number: 3 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRDTLGT*RVTPLA
Trigger: AGCGAGGGGAGTCACCCTCAAGGTTCCCAAGGTGTC...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 72 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTaGTTATTTCTGCAGCCAGTGTCCCTGGGACGGGGG +
Preference number: 3 (lower is better)
Translates to: RGQETLPRSGPS*LFLQPVSLGRG
Trigger: CCCCCGTCCCAGGGACACTGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 72 bp CTTCCTGCTGCCTCTCCCAGCAAAGGGTCTTGGCCCTaGCCGACAGATGTCCCCAAGGACCTTCGACACCTT +
Preference number: 3 (lower is better)
Translates to: LPAASPSKGSWP*PTDVPKDLRHL
Trigger: AAGGTGTCGAAGGTCCTTGGGGACATCTGTCGGGCAGGGCCAAGACCCTTTGCTGGGAGAGGCAGCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 72 bp GGCATTGGAACGGGGCCAGGAGAGGTCAGGAGACCCTaGCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: GIGTGPGEVRRP*LGQAHPAYFCS
Trigger: GCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCTCCTGGCCCCGTTCCAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CAA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACATCCCAGCAAAGGGTCTaGGCCCTGCCCGACAGATGT +
Preference number: 3 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTSQQRV*ALPDRC
Trigger: ACATCTGTCGGGCAGGGCCAAGACCCTTTGCTGGGA...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 72 bp AGGCTGGCTCTACACCCGCCGAGCTCCCAGCCAGCCTaGCAAGTTCCTGTTGTCTCCTCTGTGAGAAACAAG +
Preference number: 3 (lower is better)
Translates to: RLALHPPSSQPA*QVPVVSSVRNK
Trigger: CTTGTTTCTCACAGAGGAGACAACAGGAACTTGGCAGGCTGGCTGGGAGCTCGGCGGGTGTAGAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CAA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTGACACCTTGGGAACCTaGAGGGTGACTCCCCTCGCT +
Preference number: 3 (lower is better)
Translates to: QGPTALSLPLASDKSPSGDTLGT*RVTPLA
Trigger: AGCGAGGGGAGTCACCCTCAAGGTTCCCAAGGTGTC...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CAA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTTCCCAGCAAAGGGTCTaGGCCCTGCCCGACAGATGT +
Preference number: 3 (lower is better)
Translates to: QGPTALSLPLASDKSPSGSQQRV*ALPDRC
Trigger: ACATCTGTCGGGCAGGGCCAAGACCCTTTGCTGGGA...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 72 bp CCCAGCCAGCCTGCCAAGTTCCTGTTGTCTCCTCTGTaGGAAACAAGTACCACGGAACTGGCCACCAGCACC +
Preference number: 3 (lower is better)
Translates to: PSQPAKFLLSPL*ETSTTELATST
Trigger: GGTGCTGGTGGCCAGTTCCGTGGTACTTGTTTCTCACAGAGGAGACAACAGGAACTTGGCAGGCTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 72 bp GGCCTAGGAAGACGGAACTGGCTTAAGGCAGGTGCATaGCCAAGACAGACTGAGCTCTGCGTCAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: GLGRRNWLKAGA*PRQTELCVSCW
Trigger: CCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCCAGTTCCGTCTTCCTAGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 72 bp AACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTaGAGACGCCCTGAGTCTGCTGACCAGGATCCCAGG +
Preference number: 3 (lower is better)
Translates to: NSPQCSLSVSAL*RRPESADQDPR
Trigger: CCTGGGATCCTGGTCAGCAGACTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CAA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCTGTCCCAGGCAGCCCTaGGTGTCAGGTTCCAGAAGA +
Preference number: 3 (lower is better)
Translates to: EEQLENKAVLALELRLGSCPRQP*VSGSRR
Trigger: TCTTCTGGAACCTGACACCAAGGGCTGCCTGGGACA...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR GCA 72 bp ACCCAAATCACAAGCAGGGTCCAACTGCTTTGTCTCTaGCTCTTGCCTCTGACAAGAGTCCCTCAGGTACAG +
Preference number: 3 (lower is better)
Translates to: TQITSRVQLLCL*LLPLTRVPQVQ
Trigger: CTGTACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTGCTTGTGATTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR-3UTR CAA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGACCTCCCTTGGAGAGATaGGCAGAAATTTCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRPPLER*AEISGA
Trigger: TGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGG...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 72 bp TTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTaGTGCCTGAGTGCGGCCTGGCCCAACCCTTCAAAG +
Preference number: 3 (lower is better)
Translates to: FSLKHKKEWKAR*CLSAAWPNPSK
Trigger: CTTTGAAGGGTTGGGCCAGGCCGCACTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 72 bp CGTGGCATCAGGGGTCTAAAGCCCACAGCTACAGGATaGACTTCTAGACACAAGAGGGAAGGTGAATTTCAC +
Preference number: 3 (lower is better)
Translates to: RGIRGLKPTATG*TSRHKREGEFH
Trigger: GTGAAATTCACCTTCCCTCTTGTGTCTAGAAGTCCATCCTGTAGCTGTGGGCTTTAGACCCCTGATGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 72 bp ACTATCCCTCAAACACAGATCAATGATACCCATGAGTaGCCCACAGAGGGGGTCCTACCACAGAGACTGACT +
Preference number: 3 (lower is better)
Translates to: TIPQTQINDTHE*PTEGVLPQRLT
Trigger: AGTCAGTCTCTGTGGTAGGACCCCCTCTGTGGGTCACTCATGGGTATCATTGATCTGTGTTTGAGGGATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR TCA 72 bp ATGAGTGACCCACAGAGGGGGTCCTACCACAGAGACTaGCTTTCTTATCAGGTACCACAGCACCATTTACAA +
Preference number: 3 (lower is better)
Translates to: MSDPQRGSYHRD*LSYQVPQHHLQ
Trigger: TTGTAAATGGTGCTGTGGTACCTGATAAGAAAGTCAGTCTCTGTGGTAGGACCCCCTCTGTGGGTCACTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CCA 72 bp CTGTTACTGAATTTAAAAACCACGAAGCAGCTGTCCTaGGCTTATGAACAGTCCTCAGTGTTCGCTATCAGT +
Preference number: 3 (lower is better)
Translates to: LLLNLKTTKQLS*AYEQSSVFAIS
Trigger: ACTGATAGCGAACACTGAGGACTGTTCATAAGCCCAGGACAGCTGCTTCGTGGTTTTTAAATTCAGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 72 bp TACAGCGGGGCAAGCTGTGGGAGCAGCACTGTGGCATaGGAACGGGGCCAGGAGAGGTCAGGAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: YSGASCGSSTVA*ERGQERSGDPA
Trigger: GGCAGGGTCTCCTGACCTCTCCTGGCCCCGTTCCAATGCCACAGTGCTGCTCCCACAGCTTGCCCCGCTGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACAGGGGCAGGCGGGTCTTaGAGAGCACGGAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTGAGGS*RARSPP
Trigger: GGGTGGACTCCGTGCTCTTCAAGACCCGCCTGCCCC...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGGCCATGTCAGCCGGATaGGATTGGACCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRAMSAG*DWTSAA
Trigger: TGCTGCGCTGGTCCAATCGCATCCGGCTGACATGGC...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCCCGCTCCCCACACAGTaGCCACTCAGTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVPLPTQ*PLSRQA
Trigger: AGCCTGCCGACTGAGTGGGCACTGTGTGGGGAGCGG...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCCAGCCCCGCCACCGATaGGCCGAAATCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVQPRHR*AEIQSL
Trigger: CAGGGACTGGATTTCGGCCCATCGGTGGCGGGGCTG...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCCCTCCGAGCGCTGCCTaGAACTCCTTGCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVPPSAA*NSLPEP
Trigger: GGGCTCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGG...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGCCACCATGTCCCGGATaGCCTGGGGCATCACATAAG +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRPPCPG*PGASHK
Trigger: CTTATGTGATGCCCCAGGCCATCCGGGACATGGTGG...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGCTGAGCCCAGGAATTTaGCCTCAGAGGGCAACACAG +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRLSPGI*PQRATQ
Trigger: CTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAG...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCGTGAACTGCTCCCGCTaGACATTGCCTCCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVVNCSR*TLPPSA
Trigger: AGCGCTCGGAGGCAATGTCCAGCGGGAGCAGTTCAC...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCGGCCTGAGGGCACCCTaGGCATCGAAAAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVGLRAP*ASKSPP
Trigger: AGGTGGACTTTTCGATGCCCAGGGTGCCCTCAGGCC...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCACGCAGCATACAGGTCTaGCCACCGTTCCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPRSIQV*PPFPTP
Trigger: GGGAGTGGGGAACGGTGGTCAGACCTGTATGCTGCG...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGGGTAGGGGAGGCCGTTaGGTCTCTCCAGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGGRGGR*VSPGSS
Trigger: TGAACTCCCTGGAGAGACTCAACGGCCTCCCCTACC...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGCTTGCCAGCCTCGTCTaGCTCGTCCAGAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGLASLV*LVQSGE
Trigger: CTCACCACTCTGGACGAGGCAGACGAGGCTGGCAAG...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp ATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTGCAGACGCCCTGAGTCGTGGTACGGGAGCTaGACCTGCTCCCCGAGCACC +
Preference number: 4 (lower is better)
Translates to: MNSPQCSLSVSALCRRPESWYGS*TCSPST
Trigger: GGTGCTCGGGGAGCAGGTGCAGCTCCCGTACCACGA...CTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGGTGAACTGCTCCCGCTaGACATTGCCTCCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGVNCSR*TLPPSA
Trigger: AGCGCTCGGAGGCAATGTCCAGCGGGAGCAGTTCAC...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 72 bp CAGATGTCCCCAAGGACCTTCGACACCTTGGGAACCTaGAGGGTGACTCCCCTCGCTCTGCTCATCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QMSPRTFDTLGT*RVTPLALLIVS
Trigger: GGAGACGATGAGCAGAGCGAGGGGAGTCACCCTCAAGGTTCCCAAGGTGTCGAAGGTCCTTGGGGACATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 72 bp AACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATaGTCGGGATGTCCACCCACAGCTCTGGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: NETIGTGLRAER*SGCPPTALASI
Trigger: GATGGACGCCAGAGCTGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACATCTCCAGGGAGTTCATaGGCACTTCCTCCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTSPGSS*ALPPAR
Trigger: ACGAGCGGGAGGAAGTGCTCATGAACTCCCTGGAGA...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGCCCGAAACCCAAACATaGTTTCATCATGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRPETQT*FHHGGG
Trigger: ACCTCCGCCATGATGAAATCATGTTTGGGTTTCGGG...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCTCATGGGACAGGGCCTaGGGGCACCCTGGGCATCGA +
Preference number: 4 (lower is better)
Translates to: EEQLENKAVLALELRLGSSWDRA*GHPGHR
Trigger: TCGATGCCCAGGGTGCCCTCAGGCCCTGTCCCATGA...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCATGGGACAGGGCCTaGGGGCACCCTGGGCATCGA +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMSWDRA*GHPGHR
Trigger: TCGATGCCCAGGGTGCCCTCAGGCCCTGTCCCATGA...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCGTGGTACGGGAGCTaGACCTGCTCCCCGAGCACC +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMSWYGS*TCSPST
Trigger: GGTGCTCGGGGAGCAGGTGCAGCTCCCGTACCACGA...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTGCGGCCTCGTTCCACTaGAGCATGTCGTGGTACGGG +
Preference number: 4 (lower is better)
Translates to: QGPTALSLPLASDKSPSGAASFH*SMSWYG
Trigger: CCCGTACCACGACATGCTGCAGTGGAACGAGGCCGC...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACACAGAGAAAGCGGCCTTaGCGCCTCATGGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTQRKRP*RLMANR
Trigger: TCTGTTGGCCATGAGGCGGCAAGGCCGCTTTCTCTG...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACAATTGCCTCCGAGCGCTaGCTGGAACTCCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTIASER*LELLAR
Trigger: TCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGGCAAT...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACATCAGCCGGATGCGATTaGACCAGCGCAGCATACAGG +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTSAGCD*TSAAYR
Trigger: CCTGTATGCTGCGCTGGTCCAATCGCATCCGGCTGA...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCACACTGCAGCATGTCGTaGTACGGGAGCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSHCSMS*YGSCTC
Trigger: GCAGGTGCAGCTCCCGTACCACGACATGCTGCAGTG...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACAGGCCTTGCCGCCTCATaGCCAACAGATCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTGLAAS*PTDHCL
Trigger: CAGACAGTGATCTGTTGGCCATGAGGCGGCAAGGCC...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCACCTCCGAGGGCAGCTTaGGAGAGTTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSPPRAA*ESSTPP
Trigger: TGGTGGTGTGGAACTCTCCCAAGCTGCCCTCGGAGG...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACACGCCCGTCAGCACCATaGACAGCTCACAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTRPSAP*TAHRSS
Trigger: ACTACTCCTGTGAGCTGTCCATGGTGCTGACGGGCG...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGCGCAGCATACAGGTCTaGCCACCGTTCCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMRSIQV*PPFPTP
Trigger: GGGAGTGGGGAACGGTGGTCAGACCTGTATGCTGCG...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGCGATATCCTCACAGTTaGTGTACTCGTCCACCATGT +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRRYPHS*CTRPPC
Trigger: ACATGGTGGACGAGTACATCAACTGTGAGGATATCG...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGGGGGCAGGCGGGTCTTaGAGAGCACGGAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPEGAGGS*RARSPP
Trigger: GGGTGGACTCCGTGCTCTTCAAGACCCGCCTGCCCC...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp TTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCGCCATGTCAGCCGGATaGGATTGGACCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: FTELPRTRCPRQPLVSGSAMSAG*DWTSAA
Trigger: TGCTGCGCTGGTCCAATCGCATCCGGCTGACATGGC...GGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCATCGCTGTTCAGCTCCTaGCGCTTGGCTTCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPSLFSS*RLASSC
Trigger: ACAGCTCGAAGCCAAGCGGCAGGAGCTGAACAGCGA...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGGCGGCCTCGTTCCACTaGAGCATGTCGTGGTACGGG +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMAASFH*SMSWYG
Trigger: CCCGTACCACGACATGCTGCAGTGGAACGAGGCCGC...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCACAGGCCGCAGCACAGTaGGCTCTTGCATTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSQAAAQ*ALAFLP
Trigger: TGGGAGAAATGCAAGAGCCCACTGTGCTGCGGCCTG...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGATCTGTCCTCCAGTGTaGCAGAGAAAACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRICPPV*QRKQLL
Trigger: AAGCAGCTGTTTTCTCTGCCACACTGGAGGACAGAT...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGATATTTCCGCTTAACTaGCACCTGCGGTGGGATTTC +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRIFPLN*HLRWDF
Trigger: GAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATAT...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCAACTCAGTCGGCAGGCTaGGCTTCGGCTGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPTQSAG*ASAGFC
Trigger: GCAAAAACCAGCCGAAGCCCAGCCTGCCGACTGAGT...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTCACTGCAGCATGTCGTaGTACGGGAGCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: QGPTALSLPLASDKSPSGHCSMS*YGSCTC
Trigger: GCAGGTGCAGCTCCCGTACCACGACATGCTGCAGTG...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGGCTTTGCCTGAACGATaGGGGATCTCAGCCGCTACC +
Preference number: 4 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWALPER*GISAAT
Trigger: GGTAGCGGCTGAGATCCCCCATCGTTCAGGCAAAGC...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp ATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTGCAGACGCCCTGAGCCTCCGAGGGCAGCTTaGGAGAGTTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: MNSPQCSLSVSALCRRPEPPRAA*ESSTPP
Trigger: TGGTGGTGTGGAACTCTCCCAAGCTGCCCTCGGAGG...CTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGGCTCACAGGAGTAGTTaGAATTGTAGAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRAHRSS*NCRART
Trigger: AGTCCTGGCTCTACAATTCCAACTACTCCTGTGAGC...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp ATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTGCAGACGCCCTGAGTCCAGCTGCTTTGCCTaGACGATGGGGGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: MNSPQCSLSVSALCRRPESSCFA*TMGDLS
Trigger: GCTGAGATCCCCCATCGTTCAGGCAAAGCAGCTGGA...CTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp TTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCTCTCCAGGGAGTTCATaGGCACTTCCTCCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: FTELPRTRCPRQPLVSGSSPGSS*ALPPAR
Trigger: ACGAGCGGGAGGAAGTGCTCATGAACTCCCTGGAGA...GGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAGGTAGGGGAGGCCGTTaGGTCTCTCCAGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRGRGGR*VSPGSS
Trigger: TGAACTCCCTGGAGAGACTCAACGGCCTCCCCTACC...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCCCCGAAACCCAAACATaGTTTCATCATGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVPETQT*FHHGGG
Trigger: ACCTCCGCCATGATGAAATCATGTTTGGGTTTCGGG...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCGCTCCCCACACAGTaGCCACTCAGTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPHCLPPPSLSNTRKNGKPLPTQ*PLSRQA
Trigger: AGCCTGCCGACTGAGTGGGCACTGTGTGGGGAGCGG...CTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTCAGAGAAAGCGGCCTTaGCGCCTCATGGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: QGPTALSLPLASDKSPSGQRKRP*RLMANR
Trigger: TCTGTTGGCCATGAGGCGGCAAGGCCGCTTTCTCTG...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCCGGGGAGCAGTCGGATaGGCAGGGACAGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VYDKTRTYLANHSLRVLARGAVG*AGTVWA
Trigger: AGCCCAAACTGTCCCTGCCCATCCGACTGCTCCCCG...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGCTACCTCTTCCCGGATaGGAGCAGCTGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWLPLPG*EQLGSE
Trigger: TTCAGATCCCAGCTGCTCCCATCCGGGAAGAGGTAG...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCCCGACCCACTGAGCCCAGGAATTTaGCCTCAGAGGGCAACACAG +
Preference number: 4 (lower is better)
Translates to: GRTLPWRDWQKFQVHPDPLSPGI*PQRATQ
Trigger: CTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAG...TGGGTCGGGGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCAGCCCCGCCACCGATaGGCCGAAATCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMQPRHR*AEIQSL
Trigger: CAGGGACTGGATTTCGGCCCATCGGTGGCGGGGCTG...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CATAGCTGGGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCGGCCTGAGGGCACCCTaGGCATCGAAAAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: HSWVGPSLGEIGRNFRCTGLRAP*ASKSPP
Trigger: AGGTGGACTTTTCGATGCCCAGGGTGCCCTCAGGCC...GGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACCCAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAGCATGGACAAGGGGTaGCACGACCAGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRSMDKG*HDQVKA
Trigger: GGCTTTGACCTGGTCGTGTCACCCCTTGTCCATGCT...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGAGCATGGACAAGGGGTaGCACGACCAGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMSMDKG*HDQVKA
Trigger: GGCTTTGACCTGGTCGTGTCACCCCTTGTCCATGCT...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGATCCAGCTGCTTTGCCTaGACGATGGGGGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRSSCFA*TMGDLS
Trigger: GCTGAGATCCCCCATCGTTCAGGCAAAGCAGCTGGA...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGCCGAAATCCAGTCCCTaGGCCCAGGAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMPKSSP*AQEFGL
Trigger: GAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGG...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTCAGTACGGACGACCATaGTGGGGACACCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: QGPTALSLPLASDKSPSGQYGRP*WGHQCL
Trigger: CAGACATTGGTGTCCCCATCATGGTCGTCCGTACTG...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp ATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTGCAGACGCCCTGAGTCATCATGGCGGAGGTaGGCATCATCGTCGATGGAC +
Preference number: 4 (lower is better)
Translates to: MNSPQCSLSVSALCRRPESSWRR*ASSSMD
Trigger: GTCCATCGACGATGATGCTCACCTCCGCCATGATGA...CTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCCCGACCCAAGCTGCAGCAGGTCCTaGTTGGCATTCTCTATGCTC +
Preference number: 4 (lower is better)
Translates to: GRTLPWRDWQKFQVHPDPSCSRS*LAFSML
Trigger: GAGCATAGAGAATGCCAAGCAGGACCTGCTGCAGCT...TGGGTCGGGGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCACGCTTAACTGGCACCTaGGGTGGGATTTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSRLTGT*GGISMK
Trigger: CTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCG...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CATAGCTGGGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCATTGCCTCCGAGCGCTaGCTGGAACTCCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSWVGPSLGEIGRNFRCTIASER*LELLAR
Trigger: TCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGGCAAT...GGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACCCAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGATCAGCCGGATGCGATTaGACCAGCGCAGCATACAGG +
Preference number: 4 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRSAGCD*TSAAYR
Trigger: CCTGTATGCTGCGCTGGTCCAATCGCATCCGGCTGA...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGAGGGACAGTTTGGGCTaGTTCTGGGCCATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMRDSLG*FWAISS
Trigger: GGAGCTGATGGCCCAGAACCAGCCCAAACTGTCCCT...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTGGGCAGGGACAGTTTaGGCTGGTTCTGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMWAGTV*AGSGPS
Trigger: TGATGGCCCAGAACCAGCCCAAACTGTCCCTGCCCA...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CATAGCTGGGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCTGGGCAGGGACAGTTTaGGCTGGTTCTGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: HSWVGPSLGEIGRNFRCTWAGTV*AGSGPS
Trigger: TGATGGCCCAGAACCAGCCCAAACTGTCCCTGCCCA...GGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACCCAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCGGGGAGCAGTCGGATaGGCAGGGACAGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMRGAVG*AGTVWA
Trigger: AGCCCAAACTGTCCCTGCCCATCCGACTGCTCCCCG...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CATAGCTGGGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCCAGGCCGCAGCACAGTaGGCTCTTGCATTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HSWVGPSLGEIGRNFRCTQAAAQ*ALAFLP
Trigger: TGGGAGAAATGCAAGAGCCCACTGTGCTGCGGCCTG...GGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACCCAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CATAGCTGGGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCACTCAGTCGGCAGGCTaGGCTTCGGCTGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: HSWVGPSLGEIGRNFRCTTQSAG*ASAGFC
Trigger: GCAAAAACCAGCCGAAGCCCAGCCTGCCGACTGAGT...GGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACCCAGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAGCTTTGCCTGAACGATaGGGGATCTCAGCCGCTACC +
Preference number: 4 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRALPER*GISAAT
Trigger: GGTAGCGGCTGAGATCCCCCATCGTTCAGGCAAAGC...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGCATTGTCAGCCATGTTaGGGTCAGTTCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGHCQPC*GQFQLL
Trigger: AAGCAGCTGGAACTGACCCCAACATGGCTGACAATG...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCCGTCGATGGACAGTATaGCCTCTGTCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVRRWTV*PLSQSH
Trigger: ATGAGATTGAGACAGAGGCCATACTGTCCATCGACG...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTACAGGCTTCAATCTTaGGGTTCAGCTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVYRLQS*GSAWQS
Trigger: AGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTA...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCAGCTCTCACTGTAGCCTaGAAAGCCTGCTTGACCAAA +
Preference number: 4 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPALTVA*KACLTK
Trigger: TTTGGTCAAGCAGGCTTTTCAGGCTACAGTGAGAGC...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCTCATCATGGCGGAGGTaGGCATCATCGTCGATGGAC +
Preference number: 4 (lower is better)
Translates to: EEQLENKAVLALELRLGSSSWRR*ASSSMD
Trigger: GTCCATCGACGATGATGCTCACCTCCGCCATGATGA...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCTTGCCAGCCTCGTCTaGCTCGTCCAGAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LPHCLPPPSLSNTRKNGKLASLV*LVQSGE
Trigger: CTCACCACTCTGGACGAGGCAGACGAGGCTGGCAAG...CTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp TTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCAGCTGCAGCAGGTCCTaGTTGGCATTCTCTATGCTC +
Preference number: 4 (lower is better)
Translates to: FTELPRTRCPRQPLVSGSSCSRS*LAFSML
Trigger: GAGCATAGAGAATGCCAAGCAGGACCTGCTGCAGCT...GGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGATCTGTCCTCCAGTGTaGCAGAGAAAACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGICPPV*QRKQLL
Trigger: AAGCAGCTGTTTTCTCTGCCACACTGGAGGACAGAT...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp ATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTGCAGACGCCCTGAGAACTGGCACCTGCGGTaGGATTTCCATGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: MNSPQCSLSVSALCRRPENWHLR*DFHEVG
Trigger: CCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTT...CTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGCCGGATGGGAGCAGCTaGGATCTGAATTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMPDGSS*DLNSSP
Trigger: AGGACTCGAATTCAGATCCCAGCTGCTCCCATCCGG...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCCCGACCCAGAGCATCATCGTCGATaGACAGTATGGCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GRTLPWRDWQKFQVHPDPEHHRR*TVWPLS
Trigger: AGACAGAGGCCATACTGTCCATCGACGATGATGCTC...TGGGTCGGGGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCGAGCCAGGACTGGTGTaGTATGTCCCACGCATGGTA +
Preference number: 4 (lower is better)
Translates to: EEQLENKAVLALELRLGSEPGLV*YVPRMV
Trigger: TACCATGCGTGGGACATACCACACCAGTCCTGGCTC...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCCGCCCGTCAGCACCATaGACAGCTCACAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: VYDKTRTYLANHSLRVLARPSAP*TAHRSS
Trigger: ACTACTCCTGTGAGCTGTCCATGGTGCTGACGGGCG...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCACGATATCCTCACAGTTaGTGTACTCGTCCACCATGT +
Preference number: 4 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSRYPHS*CTRPPC
Trigger: ACATGGTGGACGAGTACATCAACTGTGAGGATATCG...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGACGCTTAACTGGCACCTaGGGTGGGATTTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRRLTGT*GGISMK
Trigger: CTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCG...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCCCGGATGGGAGCAGCTaGGATCTGAATTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VYDKTRTYLANHSLRVLAPDGSS*DLNSSP
Trigger: AGGACTCGAATTCAGATCCCAGCTGCTCCCATCCGG...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCAGCTCACAGGAGTAGTTaGAATTGTAGAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPAHRSS*NCRART
Trigger: AGTCCTGGCTCTACAATTCCAACTACTCCTGTGAGC...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGCCACCATGTCCCGGATaGCCTGGGGCATCACATAAG +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPEPPCPG*PGASHK
Trigger: CTTATGTGATGCCCCAGGCCATCCGGGACATGGTGG...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAAAAGCCTGCTTaGCCAAAGGGTCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMPEKPA*PKGPGS
Trigger: GCTACCTGGACCCTTTGGTCAAGCAGGCTTTTCAGG...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGCAGTACGGACGACCATaGTGGGGACACCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LTVCRLLLSQTQERMESQQYGRP*WGHQCL
Trigger: CAGACATTGGTGTCCCCATCATGGTCGTCCGTACTG...CTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACAGCTTGGCATTCTCTATaGTCTTCTTACAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTAWHSL*SSYRLQ
Trigger: TTGAAGCCTGTAAGAAGAGCATAGAGAATGCCAAGC...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCGCACCTGATCCAGCTTaGTGTCCTGTACGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: VYDKTRTYLANHSLRVLAAPDPA*CPVRPL
Trigger: TAAAGGCCGTACAGGACAGCAAGCTGGATCAGGTGC...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCAACTGGCACCTGCGGTaGGATTTCCATGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: VYDKTRTYLANHSLRVLANWHLR*DFHEVG
Trigger: CCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTT...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCTACCTCTTCCCGGATaGGAGCAGCTGGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMLPLPG*EQLGSE
Trigger: TTCAGATCCCAGCTGCTCCCATCCGGGAAGAGGTAG...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTCCTCCGAGCGCTGCCTaGAACTCCTTGCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPPPSAA*NSLPEP
Trigger: GGGCTCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGG...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCGAGCATCATCGTCGATaGACAGTATGGCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EEQLENKAVLALELRLGSEHHRR*TVWPLS
Trigger: AGACAGAGGCCATACTGTCCATCGACGATGATGCTC...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGAGCCAGGACTGGTGTaGTATGTCCCACGCATGGTA +
Preference number: 4 (lower is better)
Translates to: LTVCRLLLSQTQERMESQEPGLV*YVPRMV
Trigger: TACCATGCGTGGGACATACCACACCAGTCCTGGCTC...CTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp ATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTGCAGACGCCCTGAGGGTTTCCGTGTGATGTaGGAGACAAGGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: MNSPQCSLSVSALCRRPEGFRVM*ETRKFM
Trigger: CATGAACTTCCTTGTCTCCCACATCACACGGAAACC...CTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGCACTTGGTCTTGTCATaGGGCAGGCGGGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LTVCRLLLSQTQERMESQHLVLS*GRRVLK
Trigger: CTTCAAGACCCGCCTGCCCCATGACAAGACCAAGTG...CTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGCACTTGGTCTTGTCATaGGGCAGGCGGGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPEHLVLS*GRRVLK
Trigger: CTTCAAGACCCGCCTGCCCCATGACAAGACCAAGTG...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp TTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCGCTGGTTTTTGCAAGTaGATTCTACCAGCACCTGAT +
Preference number: 4 (lower is better)
Translates to: FTELPRTRCPRQPLVSGSAGFCK*ILPAPD
Trigger: ATCAGGTGCTGGTAGAATTCACTTGCAAAAACCAGC...GGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCGGAGCAGCTGGGATCTaGATTCGAGTCCTAATCATG +
Preference number: 4 (lower is better)
Translates to: VYDKTRTYLANHSLRVLAGAAGI*IRVLIM
Trigger: CATGATTAGGACTCGAATTCAGATCCCAGCTGCTCC...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGGGCAGAGAAAACAGCTaGTTTTCAAGGTCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMGRENS*FSRSAG
Trigger: GCCTGCCGACCTTGAAAAGCAGCTGTTTTCTCTGCC...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCATAATGACGTGGTTGTaGCCATCTGTCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EEQLENKAVLALELRLGSIMTWL*PSVLQC
Trigger: ACACTGGAGGACAGATGGGCACAACCACGTCATTAT...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGGCACCTGATCCAGCTTaGTGTCCTGTACGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LPHCLPPPSLSNTRKNGKAPDPA*CPVRPL
Trigger: TAAAGGCCGTACAGGACAGCAAGCTGGATCAGGTGC...CTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTGGGCAGCATAGAAGGTaGACTGGGCCACCATGGCCC +
Preference number: 4 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPGQHRR*TGPPWP
Trigger: GGGCCATGGTGGCCCAGTCCACCTTCTATGCTGCCC...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAAGAGCAACTGGAAAACAAAGCTGTCCTGGCCCTGGAGCTGAGACTAGGTAGCATATTTCCGCTTAACTaGCACCTGCGGTGGGATTTC +
Preference number: 4 (lower is better)
Translates to: EEQLENKAVLALELRLGSIFPLN*HLRWDF
Trigger: GAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATAT...GCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTTTTCCAGTTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGGGTTTCCGTGTGATGTaGGAGACAAGGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMGFRVM*ETRKFM
Trigger: CATGAACTTCCTTGTCTCCCACATCACACGGAAACC...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 72 bp AGGGCTGATGAGAGGACAGAAGGTTGGGAAACAGTCTaGACCCCTTCACTGAGTTGCCAAGAACCAGATGTC +
Preference number: 4 (lower is better)
Translates to: RADERTEGWETV*TPSLSCQEPDV
Trigger: GACATCTGGTTCTTGGCAACTCAGTGAAGGGGTCAAGACTGTTTCCCAACCTTCTGTCCTCTCATCAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
3UTR CAA 72 bp CCCACCAGGCCCAGAGGGCTATCCCCTAGGACACTCTaGACATCACTATCCCTCAAACACAGATCAATGATA +
Preference number: 4 (lower is better)
Translates to: PTRPRGLSPRTL*TSLSLKHRSMI
Trigger: TATCATTGATCTGTGTTTGAGGGATAGTGATGTCAAGAGTGTCCTAGGGGATAGCCCTCTGGGCCTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGGCTCTCACTGTAGCCTaGAAAGCCTGCTTGACCAAA +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPEALTVA*KACLTK
Trigger: TTTGGTCAAGCAGGCTTTTCAGGCTACAGTGAGAGC...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGGGAGCAGCTGGGATCTaGATTCGAGTCCTAATCATG +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPEGAAGI*IRVLIM
Trigger: CATGATTAGGACTCGAATTCAGATCCCAGCTGCTCC...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GGTAGGACCCTCCCTTGGAGAGATTGGCAGAAATTTCAGGTGCACCCCGACCCAATTAAAAATACTGTCTaGGGTGGAGAAGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GRTLPWRDWQKFQVHPDPIKNTV*GGEVGL
Trigger: GAGACCTACTTCTCCACCGCAGACAGTATTTTTAAT...TGGGTCGGGGTGCACCTGAAATTTCTGCCAATCTCTCCAAGGGAGGGTCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp ATGAACAGTCCTCAGTGTTCGCTATCAGTCAGTGCCCTGTGCAGACGCCCTGAGTCGATCTTCTCGCCCTaGAAAGTGAAGAGATATTTC +
Preference number: 4 (lower is better)
Translates to: MNSPQCSLSVSALCRRPESIFSP*KVKRYF
Trigger: GAAATATCTCTTCACTTTCCAGGGCGAGAAGATCGA...CTCAGGGCGTCTGCACAGGGCACTGACTGATAGCGAACACTGAGGACTGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTTCGATCTTCTCGCCCTaGAAAGTGAAGAGATATTTC +
Preference number: 4 (lower is better)
Translates to: QGPTALSLPLASDKSPSGSIFSP*KVKRYF
Trigger: GAAATATCTCTTCACTTTCCAGGGCGAGAAGATCGA...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCATTGTCAGCCATGTTaGGGTCAGTTCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LPHCLPPPSLSNTRKNGKHCQPC*GQFQLL
Trigger: AAGCAGCTGGAACTGACCCCAACATGGCTGACAATG...CTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTCCGAAATCCAGTCCCTaGGCCCAGGAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPPKSSP*AQEFGL
Trigger: GAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGG...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGATAATGACGTGGTTGTaGCCATCTGTCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMIMTWL*PSVLQC
Trigger: ACACTGGAGGACAGATGGGCACAACCACGTCATTAT...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTGGCCTTGCCGCCTCATaGCCAACAGATCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPGLAAS*PTDHCL
Trigger: CAGACAGTGATCTGTTGGCCATGAGGCGGCAAGGCC...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGCGTCGATGGACAGTATaGCCTCTGTCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPERRWTV*PLSQSH
Trigger: ATGAGATTGAGACAGAGGCCATACTGTCCATCGACG...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGTACAGGCTTCAATCTTaGGGTTCAGCTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPEYRLQS*GSAWQS
Trigger: AGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTA...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR TCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGGCTGGTTTTTGCAAGTaGATTCTACCAGCACCTGAT +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMAGFCK*ILPAPD
Trigger: ATCAGGTGCTGGTAGAATTCACTTGCAAAAACCAGC...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGGCTTGGCATTCTCTATaGTCTTCTTACAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: RLLLSQTQERMESQVMPEAWHSL*SSYRLQ
Trigger: TTGAAGCCTGTAAGAAGAGCATAGAGAATGCCAAGC...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTGGCAGAGAAAACAGCTaGTTTTCAAGGTCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPGRENS*FSRSAG
Trigger: GCCTGCCGACCTTGAAAAGCAGCTGTTTTCTCTGCC...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR GCA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGATTAAAAATACTGTCTaGGGTGGAGAAGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VCRLLLSQTQERMESQVMIKNTV*GGEVGL
Trigger: GAGACCTACTTCTCCACCGCAGACAGTATTTTTAAT...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp ACTGCTCCCGCTGGACATTGCCTCCGAGCGCTGCCTGGAACTCCTTaGCAGAGCCCCCAGCCCCGCCACCGATGGGCCGAAATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: TAPAGHCLRALPGTP*QSPQPRHRWAEIQS
Trigger: GGACTGGATTTCGGCCCATCGGTGGCGGGGCTGGGGGCTCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGGCAATGTCCAGCGGGAGCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GGCCCCCACCTCCAGGGCCTCGAAGAGCCGCGTGGCACACCCAGATaGAATGAGCAGGTGCGGGTCCCCGGGAGTGATGATGAGGGCGAA +
Preference number: 5 (lower is better)
Translates to: GPHLQGLEEPRGTPR*NEQVRVPGSDDEGE
Trigger: TTCGCCCTCATCATCACTCCCGGGGACCCGCACCTGCTCATTTCATCTGGGTGTGCCACGCGGCTCTTCGAGGCCCTGGAGGTGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp ACAACTGTGAACTGCTCCCGCTGGACATTGCCTCCGAGCGCTGCCTaGAACTCCTTGCCAGAGCCCCCAGCCCCGCCACCGATGGGCCGA +
Preference number: 5 (lower is better)
Translates to: TTVNCSRWTLPPSAA*NSLPEPPAPPPMGR
Trigger: TCGGCCCATCGGTGGCGGGGCTGGGGGCTCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGGCAATGTCCAGCGGGAGCAGTTCACAGTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GCCAGAGCCCCCAGCCCCGCCACCGATGGGCCGAAATCCAGTCCCTaGGCCCAGGAATTTGGCCTCAGAGGGCAACACAGGATCAAAGGG +
Preference number: 5 (lower is better)
Translates to: ARAPSPATDGPKSSP*AQEFGLRGQHRIKG
Trigger: CCCTTTGATCCTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGGCCCATCGGTGGCGGGGCTGGGGGCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp AGGGCCTCGAAGAGCCGCGTGGCACACCCAGATGAAATGAGCAGGTaGGGGTCCCCGGGAGTGATGATGAGGGCGAAGGTGGAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RASKSRVAHPDEMSR*GSPGVMMRAKVESF
Trigger: GAAGCTCTCCACCTTCGCCCTCATCATCACTCCCGGGGACCCGCACCTGCTCATTTCATCTGGGTGTGCCACGCGGCTCTTCGAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp CTCACTGCCAGCCCGAGGGCCGAAGATGCGCTTGCCAGCCTCGTCTaGCTCGTCCAGAGTGGTGAGGTAATAGTGAGCAATGAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: LTASPRAEDALASLV*LVQSGEVIVSNEGE
Trigger: TTCCCCCTCATTGCTCACTATTACCTCACCACTCTGGACGAGGCAGACGAGGCTGGCAAGCGCATCTTCGGCCCTCGGGCTGGCAGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp CGGCATCGTCCTTCTCGGGGAGCAGTCGGATGGGCAGGGACAGTTTaGGCTGGTTCTGGGCCATCAGCTCCTTGTAGGAGTGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: RHRPSRGAVGWAGTV*AGSGPSAPCRSALS
Trigger: AGACAGAGCACTCCTACAAGGAGCTGATGGCCCAGAACCAGCCCAAACTGTCCCTGCCCATCCGACTGCTCCCCGAGAAGGACGATGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GCCGGAGGGTCGCCCTCCATCTCTTCCTCGAAGGAACGGGCCTCCTaGAGGCTAGATCTCAGAGACTCGATCTTCTCGCCCTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: AGGSPSISSSKERAS*RLDLRDSIFSPWKV
Trigger: CACTTTCCAGGGCGAGAAGATCGAGTCTCTGAGATCTAGCCTTCAGGAGGCCCGTTCCTTCGAGGAAGAGATGGAGGGCGACCCTCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp TTGTCAGCCATGTTGGGGTCAGTTCCAGCTGCTTTGCCTGAACGATaGGGGATCTCAGCCGCTACCTCTTCCCGGATGGGAGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSAMLGSVPAALPER*GISAATSSRMGAAG
Trigger: CCCAGCTGCTCCCATCCGGGAAGAGGTAGCGGCTGAGATCCCCCATCGTTCAGGCAAAGCAGCTGGAACTGACCCCAACATGGCTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGTCCACCCACAATGGGCAGGGACAGTTaGGGCTGGTTCTGGGCCATC +
Preference number: 5 (lower is better)
Translates to: ETIGTGLRAERLSGCPPTMGRDS*GWFWAI
Trigger: GATGGCCCAGAACCAGCCCAAACTGTCCCTGCCCAT...TGTGGGTGGACATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCACCAGAGAAAGCGGCCTaGCCGCCTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPPEKAA*PPHGQQ
Trigger: CTGTTGGCCATGAGGCGGCAAGGCCGCTTTCTCTGG...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGATGCTCCCGCTGGACATaGCCTCCGAGCGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRCSRWT*PPSAAW
Trigger: CCAGGCAGCGCTCGGAGGCAATGTCCAGCGGGAGCA...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCATCCTCCGAGGGCAGCTaGGGAGAGTTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPSSEGS*GEFHTT
Trigger: GGTGGTGTGGAACTCTCCCAAGCTGCCCTCGGAGGA...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp TTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCAGGTTCCTGGGGCAGGCGGGTCTaGAAGAGCACGGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: FTELPRTRCPRQPLVSGSWGRRV*KSTEST
Trigger: GGTGGACTCCGTGCTCTTCAAGACCCGCCTGCCCCA...GGAACCTGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GCACCTGATCCAGCTTGCTGTCCTGTACGGCCTTTAGGGTGGCAATaGTGCGATCGTCATAGTCGGCCGGAGGGTCGCCCTCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: APDPACCPVRPLGWQ*CDRHSRPEGRPPSL
Trigger: AAGAGATGGAGGGCGACCCTCCGGCCGACTATGACGATCGCATCATTGCCACCCTAAAGGCCGTACAGGACAGCAAGCTGGATCAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp CTCATGGCCAACAGATCACTGTCTGAAAGACTTCGTAACAGGAAGTaGACCTCTGTGACGCGAGGCTTGGGCACCACCAGGGCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LMANRSLSERLRNRK*TSVTRGLGTTRAAS
Trigger: CGAGGCCGCCCTGGTGGTGCCCAAGCCTCGCGTCACAGAGGTCCACTTCCTGTTACGAAGTCTTTCAGACAGTGATCTGTTGGCCATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp CCCAGGAATTTGGCCTCAGAGGGCAACACAGGATCAAAGGGTGTGTaGGGAAAAAGATGGAAGGGTCCCGGGGCAGAGTTCCAGCCACGG +
Preference number: 5 (lower is better)
Translates to: PRNLASEGNTGSKGV*GKRWKGPGAEFQPR
Trigger: CCGTGGCTGGAACTCTGCCCCGGGACCCTTCCATCTTTTTCCCCACACACCCTTTGATCCTGTGTTGCCCTCTGAGGCCAAATTCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp CCCCGCCACCGATGGGCCGAAATCCAGTCCCTGAGCCCAGGAATTTaGCCTCAGAGGGCAACACAGGATCAAAGGGTGTGTGGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: PRHRWAEIQSLSPGI*PQRATQDQRVCGEK
Trigger: TTTTTCCCCACACACCCTTTGATCCTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGGCCCATCGGTGGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCAGTCAGCCGGATGCGATaGGACCAGCGCAGCATACAG +
Preference number: 5 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPVSRMR*DQRSIQ
Trigger: CTGTATGCTGCGCTGGTCCAATCGCATCCGGCTGAC...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGGGCTTCGGCTGGTTTTaGCAAGTGAATTCTACCAGC +
Preference number: 5 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRGFGWF*QVNSTS
Trigger: GCTGGTAGAATTCACTTGCAAAAACCAGCCGAAGCC...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp AGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCTCCCGGATGAACTTGAAGCACTaGGTCTTGTCATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RPSEVLQQPGPAGLRVSRMNLKH*VLSWGR
Trigger: CCTGCCCCATGACAAGACCAAGTGCTTCAAGTTCAT...CCGGGAGACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GGGCAGCATAGAAGGTGGACTGGGCCACCATGGCCCGGCCTGTACTaGCGTTGTACAGTAGATTCTGTGTGTCTGACTTCCGGGACAGGT +
Preference number: 5 (lower is better)
Translates to: GQHRRWTGPPWPGLY*RCTVDSVCLTSGTG
Trigger: ACCTGTCCCGGAAGTCAGACACACAGAATCTACTGTACAACGTCAGTACAGGCCGGGCCATGGTGGCCCAGTCCACCTTCTATGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp ACAGATCACTGTCTGAAAGACTTCGTAACAGGAAGTGGACCTCTGTaGCGCGAGGCTTGGGCACCACCAGGGCGGCCTCGTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: TDHCLKDFVTGSGPL*REAWAPPGRPRSTA
Trigger: TGCAGTGGAACGAGGCCGCCCTGGTGGTGCCCAAGCCTCGCGTCACAGAGGTCCACTTCCTGTTACGAAGTCTTTCAGACAGTGATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp AACAGCTGCTTTTCAAGGTCGGCAGGCCGCAGCACAGTGGGCTCTTaGATTTCTCCCACTAACACCACATACAGGCAGGCGATGGCCGCA +
Preference number: 5 (lower is better)
Translates to: NSCFSRSAGRSTVGS*ISPTNTTYRQAMAA
Trigger: TGCGGCCATCGCCTGCCTGTATGTGGTGTTAGTGGGAGAAATGCAAGAGCCCACTGTGCTGCGGCCTGCCGACCTTGAAAAGCAGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GGCTTAAGGCAGGTGCATGACCAAGACAGACTGAGCTCTGCGTCAGCTGCTGGGTCAGTTCCAGCTGCTTaGCCTGAACGATGGGGGATC +
Preference number: 5 (lower is better)
Translates to: GLRQVHDQDRLSSASAAGSVPAA*PERWGI
Trigger: GATCCCCCATCGTTCAGGCAAAGCAGCTGGAACTGA...CCCAGCAGCTGACGCAGAGCTCAGTCTGTCTTGGTCATGCACCTGCCTTAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCAAGGTCCAGGTCCCCATaGTCAGCCATGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPRSRSP*SAMLGS
Trigger: TGACCCCAACATGGCTGACAATGGGGACCTGGACCT...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGTGCTCCCGCTGGACATaGCCTCCGAGCGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: VCRLLLSQTQERMESQVMCSRWT*PPSAAW
Trigger: CCAGGCAGCGCTCGGAGGCAATGTCCAGCGGGAGCA...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGATCCTCCGAGGGCAGCTaGGGAGAGTTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRSSEGS*GEFHTT
Trigger: GGTGGTGTGGAACTCTCCCAAGCTGCCCTCGGAGGA...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTACGACAAGACTAGGACTTACCTAGCAAATCACAGCCTCCGGGTTCTAGCCTGGGGCAGGCGGGTCTaGAAGAGCACGGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: VYDKTRTYLANHSLRVLAWGRRV*KSTEST
Trigger: GGTGGACTCCGTGCTCTTCAAGACCCGCCTGCCCCA...GGCTAGAACCCGGAGGCTGTGATTTGCTAGGTAAGTCCTAGTCTTGTCGTAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp GGACAGCTCACAGGAGTAGTTGGAATTGTAGAGCCAGGACTGGTGTaGTATGTCCCACGCATGGTACCGGCCAGGGAAACCCACAATGCG +
Preference number: 5 (lower is better)
Translates to: GQLTGVVGIVEPGLV*YVPRMVPARETHNA
Trigger: CGCATTGTGGGTTTCCCTGGCCGGTACCATGCGTGGGACATACCACACCAGTCCTGGCTCTACAATTCCAACTACTCCTGTGAGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp AGAAGGCAGCGCCCGTCAGCACCATGGACAGCTCACAGGAGTAGTTaGAATTGTAGAGCCAGGACTGGTGTGGTATGTCCCACGCATGGT +
Preference number: 5 (lower is better)
Translates to: RRQRPSAPWTAHRSS*NCRARTGVVCPTHG
Trigger: ACCATGCGTGGGACATACCACACCAGTCCTGGCTCTACAATTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACGGGCGCTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp TCCAGAAGACCCAGTGAAGTTCTGCAGCAGCCTGGTCCTGCTGGCCTGAGGGTCGGCTTCGGCTGGTTTTaGCAAGTGAATTCTACCAGC +
Preference number: 5 (lower is better)
Translates to: SRRPSEVLQQPGPAGLRVGFGWF*QVNSTS
Trigger: GCTGGTAGAATTCACTTGCAAAAACCAGCCGAAGCC...GACCCTCAGGCCAGCAGGACCAGGCTGCTGCAGAACTTCACTGGGTCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCATCAGTTCCAGCTGCTTaGCCTGAACGATGGGGGATC +
Preference number: 5 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSSVPAA*PERWGI
Trigger: GATCCCCCATCGTTCAGGCAAAGCAGCTGGAACTGA...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp GCAGAGAAAACAGCTGCTTTTCAAGGTCGGCAGGCCGCAGCACAGTaGGCTCTTGCATTTCTCCCACTAACACCACATACAGGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: AEKTAAFQGRQAAAQ*ALAFLPLTPHTGRR
Trigger: TCGCCTGCCTGTATGTGGTGTTAGTGGGAGAAATGCAAGAGCCCACTGTGCTGCGGCCTGCCGACCTTGAAAAGCAGCTGTTTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp GGACAGGTTGATAATGACGTGGTTGTGCCCATCTGTCCTCCAGTGTaGCAGAGAAAACAGCTGCTTTTCAAGGTCGGCAGGCCGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GQVDNDVVVPICPPV*QRKQLLFKVGRPQH
Trigger: GTGCTGCGGCCTGCCGACCTTGAAAAGCAGCTGTTTTCTCTGCCACACTGGAGGACAGATGGGCACAACCACGTCATTATCAACCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp GGCACCTGCGGTGGGATTTCCATGAAGTTGGGTTCAGACATAGCATaGACAAGGGGTGACACGACCAGGTCAAAGCCAGCTCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: GTCGGISMKLGSDIA*TRGDTTRSKPALYW
Trigger: CCAGTACAGAGCTGGCTTTGACCTGGTCGTGTCACCCCTTGTCCATGCTATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CCCTCCAGCTCCATGTTCACTAACAAGGCCACCCCTGACAGGAGCATTAGGTGGTGCAGCAGGTCCTGCTaGGCATTCTCTATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSSSMFTNKATPDRSIRWCSRSC*AFSMLF
Trigger: GAAGAGCATAGAGAATGCCAAGCAGGACCTGCTGCA...CCACCTAATGCTCCTGTCAGGGGTGGCCTTGTTAGTGAACATGGAGCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GACCCCTTCACTGAGTTGCCAAGAACCAGATGTCCCAGGCAGCCCTTGGTGTCATGCAGCAGGTCCTGCTaGGCATTCTCTATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: DPFTELPRTRCPRQPLVSCSRSC*AFSMLF
Trigger: GAAGAGCATAGAGAATGCCAAGCAGGACCTGCTGCA...TGACACCAAGGGCTGCCTGGGACATCTGGTTCTTGGCAACTCAGTGAAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCAGAGAAAGCGGCCTaGCCGCCTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: VCRLLLSQTQERMESQVMPEKAA*PPHGQQ
Trigger: CTGTTGGCCATGAGGCGGCAAGGCCGCTTTCTCTGG...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp CGGTGGAGAAGTAGGTCTCCCAGAGAAAGCGGCCTTGCCGCCTCATaGCCAACAGATCACTGTCTGAAAGACTTCGTAACAGGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: RWRSRSPRESGLAAS*PTDHCLKDFVTGSG
Trigger: TCCACTTCCTGTTACGAAGTCTTTCAGACAGTGATCTGTTGGCCATGAGGCGGCAAGGCCGCTTTCTCTGGGAGACCTACTTCTCCACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp ACGATGGGGGATCTCAGCCGCTACCTCTTCCCGGATGGGAGCAGCTaGGATCTGAATTCGAGTCCTAATCATGGCCAGCACGGTATTAAA +
Preference number: 5 (lower is better)
Translates to: TMGDLSRYLFPDGSS*DLNSSPNHGQHGIK
Trigger: TTTAATACCGTGCTGGCCATGATTAGGACTCGAATTCAGATCCCAGCTGCTCCCATCCGGGAAGAGGTAGCGGCTGAGATCCCCCATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGGTCAGCCGGATGCGATaGGACCAGCGCAGCATACAG +
Preference number: 5 (lower is better)
Translates to: VCRLLLSQTQERMESQVMVSRMR*DQRSIQ
Trigger: CTGTATGCTGCGCTGGTCCAATCGCATCCGGCTGAC...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGATGGGCAGGGACAGTTaGGGCTGGTTCTGGGCCATC +
Preference number: 5 (lower is better)
Translates to: VCRLLLSQTQERMESQVMMGRDS*GWFWAI
Trigger: GATGGCCCAGAACCAGCCCAAACTGTCCCTGCCCAT...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GAAAAGAAACGAGACAATAGGGACAGGGCTCAGGGCAGAGCGATTGTCGGGATGCCATTGTCAGCCATGTaGGGGTCAGTTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: EKKRDNRDRAQGRAIVGMPLSAM*GSVPAA
Trigger: AGCAGCTGGAACTGACCCCAACATGGCTGACAATGG...CATCCCGACAATCGCTCTGCCCTGAGCCCTGTCCCTATTGTCTCGTTTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp AGAGGTCAGGAGACCCTGCCTAGGTCAGGCCCATCCTGCTTATTTCTGCAGCCAATGAACTTGAAGCACTaGGTCTTGTCATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RGQETLPRSGPSCLFLQPMNLKH*VLSWGR
Trigger: CCTGCCCCATGACAAGACCAAGTGCTTCAAGTTCAT...TGGCTGCAGAAATAAGCAGGATGGGCCTGACCTAGGCAGGGTCTCCTGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GTAACAGTCTGTGACAGTCAGAGTGAAATTGCGGAGGTATTTAGGTaGGGCATAGGGTGGTTCTGTCTCTACCGGCCCCAGGTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: VTVCDSQSEIAEVFR*GIGWFCLYRPQVQV
Trigger: GACCTGGACCTGGGGCCGGTAGAGACAGAACCACCCTATGCCTCACCTAAATACCTCCGCAATTTCACTCTGACTGTCACAGACTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp GCTTCAATCTTGAGGTTCAGCTTGGCAATCTCGCTGTTCAGCTCCTaGCGCTTGGCTTCGAGCTGTAGAAGCTCTTCGCTCACAGACTCA +
Preference number: 5 (lower is better)
Translates to: ASILRFSLAISLFSS*RLASSCRSSSLTDS
Trigger: TGAGTCTGTGAGCGAAGAGCTTCTACAGCTCGAAGCCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGATTGAAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGCCTGAGCCCAGGAATTaGGCCTCAGAGGGCAACACA +
Preference number: 5 (lower is better)
Translates to: RLLLSQTQERMESQVMPEPEPRN*ASEGNT
Trigger: TGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGG...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GGTCCTGCTTGGCATTCTCTATGCTCTTCTTACAGGCTTCAATCTTaGGGTTCAGCTTGGCAATCTCGCTGTTCAGCTCCTGCCGCTTGG +
Preference number: 5 (lower is better)
Translates to: GPAWHSLCSSYRLQS*GSAWQSRCSAPAAW
Trigger: CCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTAAGAAGAGCATAGAGAATGCCAAGCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp GGGATCTCAGCCGCTACCTCTTCCCGGATGGGAGCAGCTGGGATCTaGATTCGAGTCCTAATCATGGCCAGCACGGTATTAAAAATACTG +
Preference number: 5 (lower is better)
Translates to: GISAATSSRMGAAGI*IRVLIMASTVLKIL
Trigger: CAGTATTTTTAATACCGTGCTGGCCATGATTAGGACTCGAATTCAGATCCCAGCTGCTCCCATCCGGGAAGAGGTAGCGGCTGAGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp GGTAGGCATAATACTTGTGAAAGAAGGCAGCGCCCGTCAGCACCATaGACAGCTCACAGGAGTAGTTGGAATTGTAGAGCCAGGACTGGT +
Preference number: 5 (lower is better)
Translates to: GRHNTCERRQRPSAP*TAHRSSWNCRARTG
Trigger: ACCAGTCCTGGCTCTACAATTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACGGGCGCTGCCTTCTTTCACAAGTATTATGCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CAGGTCTCATCTCTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAATCTTGAGGTTCAGCTaGGCAATCTCGCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: QVSSLPHCLPPPSLSNTRILRFS*AISLFS
Trigger: GCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGAT...TCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAGAGATGAGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CTGCCTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCATTGTCAGCCATGTaGGGGTCAGTTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPHCLPPPSLSNTRKNGKPLSAM*GSVPAA
Trigger: AGCAGCTGGAACTGACCCCAACATGGCTGACAATGG...CTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp TGGGATTTCCATGAAGTTGGGTTCAGACATAGCATGGACAAGGGGTaGCACGACCAGGTCAAAGCCAGCTCTGTACTGGGCAGCATAGAA +
Preference number: 5 (lower is better)
Translates to: WDFHEVGFRHSMDKG*HDQVKASSVLGSIE
Trigger: TTCTATGCTGCCCAGTACAGAGCTGGCTTTGACCTGGTCGTGTCACCCCTTGTCCATGCTATGTCTGAACCCAACTTCATGGAAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp AATTCGAGTCCTAATCATGGCCAGCACGGTATTAAAAATACTGTCTaGGGTGGAGAAGTAGGTCTCCCAGAGAAAGCGGCCTTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: NSSPNHGQHGIKNTV*GGEVGLPEKAALPP
Trigger: AGGCGGCAAGGCCGCTTTCTCTGGGAGACCTACTTCTCCACCGCAGACAGTATTTTTAATACCGTGCTGGCCATGATTAGGACTCGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp GCCCTGGAAAGTGAAGAGATATTTCCGCTTAACTGGCACCTGCGGTaGGATTTCCATGAAGTTGGGTTCAGACATAGCATGGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: ALESEEIFPLNWHLR*DFHEVGFRHSMDKG
Trigger: CCCCTTGTCCATGCTATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATATCTCTTCACTTTCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CAGGGTCCAACTGCTTTGTCTCTGCCTCTTGCCTCTGACAAGAGTCCCTCAGGTTTACAGGCTTCAATCTaGAGGTTCAGCTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: QGPTALSLPLASDKSPSGLQASI*RFSLAI
Trigger: GATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTAA...ACCTGAGGGACTCTTGTCAGAGGCAAGAGGCAGAGACAAAGCAGTTGGACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 90 bp TCTCTCCACACCCGAAACCCAAACATGATTTCATCATGGCGGAGGTaGGCATCATCGTCGATGGACAGTATGGCCTCTGTCTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: SLHTRNPNMISSWRR*ASSSMDSMASVSIS
Trigger: TGAGATTGAGACAGAGGCCATACTGTCCATCGACGATGATGCTCACCTCCGCCATGATGAAATCATGTTTGGGTTTCGGGTGTGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 90 bp CTCGATCTTCTCGCCCTGGAAAGTGAAGAGATATTTCCGCTTAACTaGCACCTGCGGTGGGATTTCCATGAAGTTGGGTTCAGACATAGC +
Preference number: 5 (lower is better)
Translates to: LDLLALESEEIFPLN*HLRWDFHEVGFRHS
Trigger: GCTATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATATCTCTTCACTTTCCAGGGCGAGAAGATCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGATCTTGAGGTTCAGCTaGGCAATCTCGCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VCRLLLSQTQERMESQVMILRFS*AISLFS
Trigger: GCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGAT...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGCGGCCTGTACTGACGTaGTACAGTAGATTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RLLLSQTQERMESQVMPERPVLT*YSRFCV
Trigger: CACACAGAATCTACTGTACAACGTCAGTACAGGCCG...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCGGCCTGTACTGACGTaGTACAGTAGATTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VCRLLLSQTQERMESQVMRPVLT*YSRFCV
Trigger: CACACAGAATCTACTGTACAACGTCAGTACAGGCCG...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp GAGTGCTCTGTCTGGCTAATGACATTCTTGAGCTGCAGCAGGTCCTaGTTGGCATTCTCTATGCTCTTCTTACAGGCTTCAATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: ECSVWLMTFLSCSRS*LAFSMLFLQASILR
Trigger: CCTCAAGATTGAAGCCTGTAAGAAGAGCATAGAGAATGCCAAGCAGGACCTGCTGCAGCTCAAGAATGTCATTAGCCAGACAGAGCACTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 90 bp TTCTCGCCCTGGAAAGTGAAGAGATATTTCCGCTTAACTGGCACCTaGGGTGGGATTTCCATGAAGTTGGGTTCAGACATAGCATGGACA +
Preference number: 5 (lower is better)
Translates to: FSPWKVKRYFRLTGT*GGISMKLGSDIAWT
Trigger: TGTCCATGCTATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATATCTCTTCACTTTCCAGGGCGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGCCTGAGGGGATTTCCATGAAGTaGGGTTCAGACATAGCATGG +
Preference number: 5 (lower is better)
Translates to: RLLLSQTQERMESQVMPEGISMK*GSDIAW
Trigger: CCATGCTATGTCTGAACCCAACTTCATGGAAATCCC...CTCAGGCATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp GTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGGTGATGGGGATTTCCATGAAGTaGGGTTCAGACATAGCATGG +
Preference number: 5 (lower is better)
Translates to: VCRLLLSQTQERMESQVMGISMK*GSDIAW
Trigger: CCATGCTATGTCTGAACCCAACTTCATGGAAATCCC...CATCACCTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTAGGTCCAGGTCCCCATaGTCAGCCATGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPRSRSP*SAMLGS
Trigger: TGACCCCAACATGGCTGACAATGGGGACCTGGACCT...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTCCTGAGCCCAGGAATTaGGCCTCAGAGGGCAACACA +
Preference number: 5 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPPEPRN*ASEGNT
Trigger: TGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGG...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CTCACTGTCTGCCGCCTCCTTCTCTCTCAAACACAAGAAAGAATGGAAAGCCAGACAGTCAGAGTGAAATaGCGGAGGTATTTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LTVCRLLLSQTQERMESQTVRVK*RRYLGE
Trigger: CTCACCTAAATACCTCCGCAATTTCACTCTGACTGT...CTGGCTTTCCATTCTTTCTTGTGTTTGAGAGAGAAGGAGGCGGCAGACAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS-3UTR CAA 90 bp CTAAGTTTCCCACTGCCACCATACCCCAAGTTAGTTTATTTCATTTTCAGCCCTACAGTCAGAGTGAAATaGCGGAGGTATTTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LSFPLPPYPKLVYFIFSPTVRVK*RRYLGE
Trigger: CTCACCTAAATACCTCCGCAATTTCACTCTGACTGT...AGGGCTGAAAATGAAATAAACTAACTTGGGGTATGGTGGCAGTGGGAAACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp AACTGCTCCCGCTGGACATTGCCTCCGAGCGCTGCCTaGAACTCCTTGCCAGAGCCCCCAGCCCCGCCACCG +
Preference number: 6 (lower is better)
Translates to: NCSRWTLPPSAA*NSLPEPPAPPP
Trigger: CGGTGGCGGGGCTGGGGGCTCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGGCAATGTCCAGCGGGAGCAGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp AACTGCTCCCGCTGGACATTGCCTCCGAGCGCTGCCTGGAACTCCTaGCCAGAGCCCCCAGCCCCGCCACCGATGGGCCGAAATCCAGTC +
Preference number: 6 (lower is better)
Translates to: NCSRWTLPPSAAWNS*PEPPAPPPMGRNPV
Trigger: GACTGGATTTCGGCCCATCGGTGGCGGGGCTGGGGGCTCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGGCAATGTCCAGCGGGAGCAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp CCTCACAGAGCTCACTGCCAGCCCGAGGGCCGAAGATaGGCTTGCCAGCCTCGTCTGCCTCGTCCAGAGTGG +
Preference number: 6 (lower is better)
Translates to: PHRAHCQPEGRR*ACQPRLPRPEW
Trigger: CCACTCTGGACGAGGCAGACGAGGCTGGCAAGCGCATCTTCGGCCCTCGGGCTGGCAGTGAGCTCTGTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp CAGAGCTCACTGCCAGCCCGAGGGCCGAAGATGCGCTaGCCAGCCTCGTCTGCCTCGTCCAGAGTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: QSSLPARGPKMR*PASSASSRVVR
Trigger: CCTCACCACTCTGGACGAGGCAGACGAGGCTGGCAAGCGCATCTTCGGCCCTCGGGCTGGCAGTGAGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp CCCAGCCCCGCCACCGATGGGCCGAAATCCAGTCCCTaGGCCCAGGAATTTGGCCTCAGAGGGCAACACAGG +
Preference number: 6 (lower is better)
Translates to: PSPATDGPKSSP*AQEFGLRGQHR
Trigger: CCTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGGCCCATCGGTGGCGGGGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp CTCCAGGGCCTCGAAGAGCCGCGTGGCACACCCAGATaGAATGAGCAGGTGCGGGTCCCCGGGAGTGATGAT +
Preference number: 6 (lower is better)
Translates to: LQGLEEPRGTPR*NEQVRVPGSDD
Trigger: ATCATCACTCCCGGGGACCCGCACCTGCTCATTTCATCTGGGTGTGCCACGCGGCTCTTCGAGGCCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp GAAGGCCGGCATCGTCCTTCTCGGGGAGCAGTCGGATaGGCAGGGACAGTTTGGGCTGGTTCTGGGCCATCA +
Preference number: 6 (lower is better)
Translates to: EGRHRPSRGAVG*AGTVWAGSGPS
Trigger: TGATGGCCCAGAACCAGCCCAAACTGTCCCTGCCCATCCGACTGCTCCCCGAGAAGGACGATGCCGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp AAGAGCCGCGTGGCACACCCAGATGAAATGAGCAGGTaGGGGTCCCCGGGAGTGATGATGAGGGCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: KSRVAHPDEMSR*GSPGVMMRAKV
Trigger: CACCTTCGCCCTCATCATCACTCCCGGGGACCCGCACCTGCTCATTTCATCTGGGTGTGCCACGCGGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp CCGGCCCCAGGTCCAGGTCCCCATTGTCAGCCATGTTaGGGTCAGTTCCAGCTGCTTTGCCTGAACGATGGG +
Preference number: 6 (lower is better)
Translates to: PAPGPGPHCQPC*GQFQLLCLNDG
Trigger: CCCATCGTTCAGGCAAAGCAGCTGGAACTGACCCCAACATGGCTGACAATGGGGACCTGGACCTGGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp CCAGCTTGCTGTCCTGTACGGCCTTTAGGGTGGCAATaGTGCGATCGTCATAGTCGGCCGGAGGGTCGCCCT +
Preference number: 6 (lower is better)
Translates to: PACCPVRPLGWQ*CDRHSRPEGRP
Trigger: AGGGCGACCCTCCGGCCGACTATGACGATCGCATCATTGCCACCCTAAAGGCCGTACAGGACAGCAAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp GCACTTCCTCCCGCTCGTAGGTCAGCATCACAACTGTaGACTGCTCCCGCTGGACATTGCCTCCGAGCGCTG +
Preference number: 6 (lower is better)
Translates to: ALPPARRSASQL*TAPAGHCLRAL
Trigger: CAGCGCTCGGAGGCAATGTCCAGCGGGAGCAGTTCACAGTTGTGATGCTGACCTACGAGCGGGAGGAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp GCCCCGCCACCGATGGGCCGAAATCCAGTCCCTGAGCCCAGGAATTaGGCCTCAGAGGGCAACACAGGATCAAAGGGTGTGTGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: APPPMGRNPVPEPRN*ASEGNTGSKGVWGK
Trigger: TTTTCCCCACACACCCTTTGATCCTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGGCCCATCGGTGGCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp GTCAGCCATGTTGGGGTCAGTTCCAGCTGCTTTGCCTaGACGATGGGGGATCTCAGCCGCTACCTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: VSHVGVSSSCFA*TMGDLSRYLFP
Trigger: CGGGAAGAGGTAGCGGCTGAGATCCCCCATCGTTCAGGCAAAGCAGCTGGAACTGACCCCAACATGGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp AGCCCGAGGGCCGAAGATGCGCTTGCCAGCCTCGTCTaGCTCGTCCAGAGTGGTGAGGTAATAGTGAGCAAT +
Preference number: 6 (lower is better)
Translates to: SPRAEDALASLV*LVQSGEVIVSN
Trigger: ATTGCTCACTATTACCTCACCACTCTGGACGAGGCAGACGAGGCTGGCAAGCGCATCTTCGGCCCTCGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp GTCAGCATCACAACTGTGAACTGCTCCCGCTGGACATaGCCTCCGAGCGCTGCCTGGAACTCCTTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: VSITTVNCSRWT*PPSAAWNSLPE
Trigger: CTCTGGCAAGGAGTTCCAGGCAGCGCTCGGAGGCAATGTCCAGCGGGAGCAGTTCACAGTTGTGATGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp TCGCCCTCCATCTCTTCCTCGAAGGAACGGGCCTCCTaGAGGCTAGATCTCAGAGACTCGATCTTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: SPSISSSKERAS*RLDLRDSIFSP
Trigger: GGGCGAGAAGATCGAGTCTCTGAGATCTAGCCTTCAGGAGGCCCGTTCCTTCGAGGAAGAGATGGAGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp CTCACAGACTCACGAATCCGACAGAGATCGAGGACGTaGTTTACCTCACAGAGCTCACTGCCAGCCCGAGGG +
Preference number: 6 (lower is better)
Translates to: LTDSRIRQRSRT*FTSQSSLPARG
Trigger: CCCTCGGGCTGGCAGTGAGCTCTGTGAGGTAAAGCACGTCCTCGATCTCTGTCGGATTCGTGAGTCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp TGTCCCACGCATGGTACCGGCCAGGGAAACCCACAATaGGATCACGTGCTTCTCTCCACACCCGAAACCCAA +
Preference number: 6 (lower is better)
Translates to: CPTHGTGQGNPQ*DHVLLSTPETQ
Trigger: TTGGGTTTCGGGTGTGGAGAGAAGCACGTGATCGCATTGTGGGTTTCCCTGGCCGGTACCATGCGTGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp ATGTTGGGGTCAGTTCCAGCTGCTTTGCCTGAACGATaGGGGATCTCAGCCGCTACCTCTTCCCGGATGGGA +
Preference number: 6 (lower is better)
Translates to: MLGSVPAALPER*GISAATSSRMG
Trigger: TCCCATCCGGGAAGAGGTAGCGGCTGAGATCCCCCATCGTTCAGGCAAAGCAGCTGGAACTGACCCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp CTCAGTACGGACGACCATGATGGGGACACCAATGTCTaGCCACAAAAGGTCCTCCGAGGGCAGCTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: LSTDDHDGDTNV*PQKVLRGQLGR
Trigger: TCTCCCAAGCTGCCCTCGGAGGACCTTTTGTGGCCAGACATTGGTGTCCCCATCATGGTCGTCCGTACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp GTGGACTGGGCCACCATGGCCCGGCCTGTACTGACGTaGTACAGTAGATTCTGTGTGTCTGACTTCCGGGAC +
Preference number: 6 (lower is better)
Translates to: VDWATMARPVLT*YSRFCVSDFRD
Trigger: GTCCCGGAAGTCAGACACACAGAATCTACTGTACAACGTCAGTACAGGCCGGGCCATGGTGGCCCAGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp CCGATGGGCCGAAATCCAGTCCCTGAGCCCAGGAATTaGGCCTCAGAGGGCAACACAGGATCAAAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: PMGRNPVPEPRN*ASEGNTGSKGV
Trigger: CACACCCTTTGATCCTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGGCCCATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp TTTTCAAGGTCGGCAGGCCGCAGCACAGTGGGCTCTTaGATTTCTCCCACTAACACCACATACAGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: FSRSAGRSTVGS*ISPTNTTYRQA
Trigger: CGCCTGCCTGTATGTGGTGTTAGTGGGAGAAATGCAAGAGCCCACTGTGCTGCGGCCTGCCGACCTTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp GATCTCAGCCGCTACCTCTTCCCGGATGGGAGCAGCTaGGATCTGAATTCGAGTCCTAATCATGGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: DLSRYLFPDGSS*DLNSSPNHGQH
Trigger: GTGCTGGCCATGATTAGGACTCGAATTCAGATCCCAGCTGCTCCCATCCGGGAAGAGGTAGCGGCTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp CGATGGGCCGAAATCCAGTCCCTGAGCCCAGGAATTTaGCCTCAGAGGGCAACACAGGATCAAAGGGTGTGT +
Preference number: 6 (lower is better)
Translates to: RWAEIQSLSPGI*PQRATQDQRVC
Trigger: ACACACCCTTTGATCCTGTGTTGCCCTCTGAGGCCAAATTCCTGGGCTCAGGGACTGGATTTCGGCCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp CGCCCGTCAGCACCATGGACAGCTCACAGGAGTAGTTaGAATTGTAGAGCCAGGACTGGTGTGGTATGTCCC +
Preference number: 6 (lower is better)
Translates to: RPSAPWTAHRSS*NCRARTGVVCP
Trigger: GGGACATACCACACCAGTCCTGGCTCTACAATTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp CCAATGTCTGGCCACAAAAGGTCCTCCGAGGGCAGCTaGGGAGAGTTCCACACCACCACTACCTTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: PMSGHKRSSEGS*GEFHTTTTLFR
Trigger: CCTGAACAAGGTAGTGGTGGTGTGGAACTCTCCCAAGCTGCCCTCGGAGGACCTTTTGTGGCCAGACATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp AGAAGGTGGACTGGGCCACCATGGCCCGGCCTGTACTaGCGTTGTACAGTAGATTCTGTGTGTCTGACTTCC +
Preference number: 6 (lower is better)
Translates to: RRWTGPPWPGLY*RCTVDSVCLTS
Trigger: GGAAGTCAGACACACAGAATCTACTGTACAACGTCAGTACAGGCCGGGCCATGGTGGCCCAGTCCACCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp GCCGCTACCTCTTCCCGGATGGGAGCAGCTGGGATCTaGATTCGAGTCCTAATCATGGCCAGCACGGTATTA +
Preference number: 6 (lower is better)
Translates to: AATSSRMGAAGI*IRVLIMASTVL
Trigger: TAATACCGTGCTGGCCATGATTAGGACTCGAATTCAGATCCCAGCTGCTCCCATCCGGGAAGAGGTAGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp TTGAGGTTCAGCTTGGCAATCTCGCTGTTCAGCTCCTaGCGCTTGGCTTCGAGCTGTAGAAGCTCTTCGCTC +
Preference number: 6 (lower is better)
Translates to: LRFSLAISLFSS*RLASSCRSSSL
Trigger: GAGCGAAGAGCTTCTACAGCTCGAAGCCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp TCAGCTTGGCAATCTCGCTGTTCAGCTCCTGCCGCTTaGCTTCGAGCTGTAGAAGCTCTTCGCTCACAGACT +
Preference number: 6 (lower is better)
Translates to: SAWQSRCSAPAA*LRAVEALRSQT
Trigger: AGTCTGTGAGCGAAGAGCTTCTACAGCTCGAAGCCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp CAATGTCTGGCCACAAAAGGTCCTCCGAGGGCAGCTTaGGAGAGTTCCACACCACCACTACCTTGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: QCLATKGPPRAA*ESSTPPLPCSG
Trigger: ACCTGAACAAGGTAGTGGTGGTGTGGAACTCTCCCAAGCTGCCCTCGGAGGACCTTTTGTGGCCAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp ACAGGAGTAGTTGGAATTGTAGAGCCAGGACTGGTGTaGTATGTCCCACGCATGGTACCGGCCAGGGAAACC +
Preference number: 6 (lower is better)
Translates to: TGVVGIVEPGLV*YVPRMVPARET
Trigger: GGTTTCCCTGGCCGGTACCATGCGTGGGACATACCACACCAGTCCTGGCTCTACAATTCCAACTACTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp TTCAGCTTGGCAATCTCGCTGTTCAGCTCCTGCCGCTaGGCTTCGAGCTGTAGAAGCTCTTCGCTCACAGAC +
Preference number: 6 (lower is better)
Translates to: FSLAISLFSSCR*ASSCRSSSLTD
Trigger: GTCTGTGAGCGAAGAGCTTCTACAGCTCGAAGCCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp TTGAAGCACTTGGTCTTGTCATGGGGCAGGCGGGTCTaGAAGAGCACGGAGTCCACCCTGAACTGTGTGTAC +
Preference number: 6 (lower is better)
Translates to: LKHLVLSWGRRV*KSTESTLNCVY
Trigger: GTACACACAGTTCAGGGTGGACTCCGTGCTCTTCAAGACCCGCCTGCCCCATGACAAGACCAAGTGCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp CATGAAGTTGGGTTCAGACATAGCATGGACAAGGGGTaGCACGACCAGGTCAAAGCCAGCTCTGTACTGGGC +
Preference number: 6 (lower is better)
Translates to: HEVGFRHSMDKG*HDQVKASSVLG
Trigger: GCCCAGTACAGAGCTGGCTTTGACCTGGTCGTGTCACCCCTTGTCCATGCTATGTCTGAACCCAACTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp ACAGCTGCTTTTCAAGGTCGGCAGGCCGCAGCACAGTaGGCTCTTGCATTTCTCCCACTAACACCACATACA +
Preference number: 6 (lower is better)
Translates to: TAAFQGRQAAAQ*ALAFLPLTPHT
Trigger: TGTATGTGGTGTTAGTGGGAGAAATGCAAGAGCCCACTGTGCTGCGGCCTGCCGACCTTGAAAAGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp AACAGATCACTGTCTGAAAGACTTCGTAACAGGAAGTaGACCTCTGTGACGCGAGGCTTGGGCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: NRSLSERLRNRK*TSVTRGLGTTR
Trigger: CCTGGTGGTGCCCAAGCCTCGCGTCACAGAGGTCCACTTCCTGTTACGAAGTCTTTCAGACAGTGATCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp CATGGCGGAGGTGAGCATCATCGTCGATGGACAGTATaGCCTCTGTCTCAATCTCATTCCAGGGCAAGAACC +
Preference number: 6 (lower is better)
Translates to: HGGGEHHRRWTV*PLSQSHSRART
Trigger: GGTTCTTGCCCTGGAATGAGATTGAGACAGAGGCCATACTGTCCATCGACGATGATGCTCACCTCCGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp CGCTTAACTGGCACCTGCGGTGGGATTTCCATGAAGTaGGGTTCAGACATAGCATGGACAAGGGGTGACACG +
Preference number: 6 (lower is better)
Translates to: RLTGTCGGISMK*GSDIAWTRGDT
Trigger: CGTGTCACCCCTTGTCCATGCTATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp ATCTTGAGGTTCAGCTTGGCAATCTCGCTGTTCAGCTCCTGCCGCTaGGCTTCGAGCTGTAGAAGCTCTTCGCTCACAGACTCACGAATC +
Preference number: 6 (lower is better)
Translates to: ILRFSLAISLFSSCR*ASSCRSSSLTDSRI
Trigger: GATTCGTGAGTCTGTGAGCGAAGAGCTTCTACAGCTCGAAGCCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp TGTGACAGTCAGAGTGAAATTGCGGAGGTATTTAGGTaGGGCATAGGGTGGTTCTGTCTCTACCGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: CDSQSEIAEVFR*GIGWFCLYRPQ
Trigger: CTGGGGCCGGTAGAGACAGAACCACCCTATGCCTCACCTAAATACCTCCGCAATTTCACTCTGACTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp ATGGTACCGGCCAGGGAAACCCACAATGCGATCACGTaGTTCTCTCCACACCCGAAACCCAAACATGATTTC +
Preference number: 6 (lower is better)
Translates to: MVPARETHNAIT*FSPHPKPKHDF
Trigger: GAAATCATGTTTGGGTTTCGGGTGTGGAGAGAAGCACGTGATCGCATTGTGGGTTTCCCTGGCCGGTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp GATAATGACGTGGTTGTGCCCATCTGTCCTCCAGTGTaGCAGAGAAAACAGCTGCTTTTCAAGGTCGGCAGG +
Preference number: 6 (lower is better)
Translates to: DNDVVVPICPPV*QRKQLLFKVGR
Trigger: CCTGCCGACCTTGAAAAGCAGCTGTTTTCTCTGCCACACTGGAGGACAGATGGGCACAACCACGTCATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp GGTGGGATTTCCATGAAGTTGGGTTCAGACATAGCATaGACAAGGGGTGACACGACCAGGTCAAAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: GGISMKLGSDIA*TRGDTTRSKPA
Trigger: AGCTGGCTTTGACCTGGTCGTGTCACCCCTTGTCCATGCTATGTCTGAACCCAACTTCATGGAAATCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp AGTAGGTCTCCCAGAGAAAGCGGCCTTGCCGCCTCATaGCCAACAGATCACTGTCTGAAAGACTTCGTAACA +
Preference number: 6 (lower is better)
Translates to: SRSPRESGLAAS*PTDHCLKDFVT
Trigger: TGTTACGAAGTCTTTCAGACAGTGATCTGTTGGCCATGAGGCGGCAAGGCCGCTTTCTCTGGGAGACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp GTGTCTGACTTCCGGGACAGGTTGATAATGACGTGGTaGTGCCCATCTGTCCTCCAGTGTGGCAGAGAAAAC +
Preference number: 6 (lower is better)
Translates to: VSDFRDRLIMTW*CPSVLQCGREN
Trigger: GTTTTCTCTGCCACACTGGAGGACAGATGGGCACAACCACGTCATTATCAACCTGTCCCGGAAGTCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp GCATTCTCTATGCTCTTCTTACAGGCTTCAATCTTGAGGTTCAGCTaGGCAATCTCGCTGTTCAGCTCCTGCCGCTTGGCTTCGAGCTGT +
Preference number: 6 (lower is better)
Translates to: AFSMLFLQASILRFS*AISLFSSCRLASSC
Trigger: ACAGCTCGAAGCCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTAAGAAGAGCATAGAGAATGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp AGGTCCTGCTTGGCATTCTCTATGCTCTTCTTACAGGCTTCAATCTaGAGGTTCAGCTTGGCAATCTCGCTGTTCAGCTCCTGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: RSCLAFSMLFLQASI*RFSLAISLFSSCRL
Trigger: CAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTAAGAAGAGCATAGAGAATGCCAAGCAGGACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp CTGACGTTGTACAGTAGATTCTGTGTGTCTGACTTCCGGGACAGGTaGATAATGACGTGGTTGTGCCCATCTGTCCTCCAGTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: LTLYSRFCVSDFRDR*IMTWLCPSVLQCGR
Trigger: TCTGCCACACTGGAGGACAGATGGGCACAACCACGTCATTATCAACCTGTCCCGGAAGTCAGACACACAGAATCTACTGTACAACGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp AGATATTTCCGCTTAACTGGCACCTGCGGTGGGATTTCCATGAAGTaGGGTTCAGACATAGCATGGACAAGGGGTGACACGACCAGGTCA +
Preference number: 6 (lower is better)
Translates to: RYFRLTGTCGGISMK*GSDIAWTRGDTTRS
Trigger: TGACCTGGTCGTGTCACCCCTTGTCCATGCTATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp ACCCGAAACCCAAACATGATTTCATCATGGCGGAGGTaGGCATCATCGTCGATGGACAGTATGGCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: TRNPNMISSWRR*ASSSMDSMASV
Trigger: GACAGAGGCCATACTGTCCATCGACGATGATGCTCACCTCCGCCATGATGAAATCATGTTTGGGTTTCGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp GATCACGTGCTTCTCTCCACACCCGAAACCCAAACATaGTTTCATCATGGCGGAGGTGAGCATCATCGTCGA +
Preference number: 6 (lower is better)
Translates to: DHVLLSTPETQT*FHHGGGEHHRR
Trigger: TCGACGATGATGCTCACCTCCGCCATGATGAAATCATGTTTGGGTTTCGGGTGTGGAGAGAAGCACGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp CTCGCCCTGGAAAGTGAAGAGATATTTCCGCTTAACTaGCACCTGCGGTGGGATTTCCATGAAGTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: LALESEEIFPLN*HLRWDFHEVGF
Trigger: GAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATATCTCTTCACTTTCCAGGGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp AATACTTGTGAAAGAAGGCAGCGCCCGTCAGCACCATaGACAGCTCACAGGAGTAGTTGGAATTGTAGAGCC +
Preference number: 6 (lower is better)
Translates to: NTCERRQRPSAP*TAHRSSWNCRA
Trigger: GGCTCTACAATTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACGGGCGCTGCCTTCTTTCACAAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp ATGCTCTTCTTACAGGCTTCAATCTTGAGGTTCAGCTaGGCAATCTCGCTGTTCAGCTCCTGCCGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: MLFLQASILRFS*AISLFSSCRLA
Trigger: AGCCAAGCGGCAGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTAAGAAGAGCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp AGATTCTGTGTGTCTGACTTCCGGGACAGGTTGATAATGACGTGGTaGTGCCCATCTGTCCTCCAGTGTGGCAGAGAAAACAGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: RFCVSDFRDRLIMTW*CPSVLQCGRENSCF
Trigger: AAAGCAGCTGTTTTCTCTGCCACACTGGAGGACAGATGGGCACAACCACGTCATTATCAACCTGTCCCGGAAGTCAGACACACAGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp TACAGTAGATTCTGTGTGTCTGACTTCCGGGACAGGTaGATAATGACGTGGTTGTGCCCATCTGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: YSRFCVSDFRDR*IMTWLCPSVLQ
Trigger: CTGGAGGACAGATGGGCACAACCACGTCATTATCAACCTGTCCCGGAAGTCAGACACACAGAATCTACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp GTCTGGCTAATGACATTCTTGAGCTGCAGCAGGTCCTaGTTGGCATTCTCTATGCTCTTCTTACAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: VWLMTFLSCSRS*LAFSMLFLQAS
Trigger: TGAAGCCTGTAAGAAGAGCATAGAGAATGCCAAGCAGGACCTGCTGCAGCTCAAGAATGTCATTAGCCAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 90 bp TGCTCTGTCTGGCTAATGACATTCTTGAGCTGCAGCAGGTCCTGCTaGGCATTCTCTATGCTCTTCTTACAGGCTTCAATCTTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: CSVWLMTFLSCSRSC*AFSMLFLQASILRF
Trigger: GAACCTCAAGATTGAAGCCTGTAAGAAGAGCATAGAGAATGCCAAGCAGGACCTGCTGCAGCTCAAGAATGTCATTAGCCAGACAGAGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS TCA 72 bp TGGCATTCTCTATGCTCTTCTTACAGGCTTCAATCTTaGGGTTCAGCTTGGCAATCTCGCTGTTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: WHSLCSSYRLQS*GSAWQSRCSAP
Trigger: AGGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTAAGAAGAGCATAGAGAATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CCA 72 bp AGTGAAGAGATATTTCCGCTTAACTGGCACCTGCGGTaGGATTTCCATGAAGTTGGGTTCAGACATAGCATG +
Preference number: 6 (lower is better)
Translates to: SEEIFPLNWHLR*DFHEVGFRHSM
Trigger: CATGCTATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATATCTCTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS CAA 72 bp TTGGCATTCTCTATGCTCTTCTTACAGGCTTCAATCTaGAGGTTCAGCTTGGCAATCTCGCTGTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LAFSMLFLQASI*RFSLAISLFSS
Trigger: GGAGCTGAACAGCGAGATTGCCAAGCTGAACCTCAAGATTGAAGCCTGTAAGAAGAGCATAGAGAATGCCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2
CDS GCA 72 bp TGGAAAGTGAAGAGATATTTCCGCTTAACTGGCACCTaGGGTGGGATTTCCATGAAGTTGGGTTCAGACATA +
Preference number: 6 (lower is better)
Translates to: WKVKRYFRLTGT*GGISMKLGSDI
Trigger: TATGTCTGAACCCAACTTCATGGAAATCCCACCGCAGGTGCCAGTTAAGCGGAAATATCTCTTCACTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022550.8
ENSMUST00000225633.2