Pregenerated sensors for EXTL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027963Ensembl transcript IDs: ENSMUST00000029575.12, ENSMUST00000106501.8, ENSMUST00000106502.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGAACAAGGTCAAACCAAAGGACAGCAGGCAAGACACAGACACTaGCTCCCACAGCGAGAGGTGTGTGGTAGGAACAGTGAACTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GEQGQTKGQQARHRH*LPQREVCGRNSELL Trigger: CAGGAGTTCACTGTTCCTACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTTGGTTTGACCTTGTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR GCA 90 bp | AGGTCATATGCGGTGACAGATTACAGGGACACACTGATTCCTTGTTaGATACAAGTTACATATAAGAAACATGGCTGGCACATTTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RSYAVTDYRDTLIPC*IQVTYKKHGWHISV Trigger: CACTGAAATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGTGTCCCTGTAATCTGTCACCGCATATGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR TCA 90 bp | TTATTAACACAGTGGCCAGCTGACGTTTATTTATTTGACAGTGGATaGCCAAGAAGCAAAAATGTATTACCAAATGTGGACAACCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LLTQWPADVYLFDSG*PRSKNVLPNVDNQE Trigger: TTCTTGGTTGTCCACATTTGGTAATACATTTTTGCTTCTTGGTCATCCACTGTCAAATAAATAAACGTCAGCTGGCCACTGTGTTAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029575.12 |
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| 3UTR-3UTR TCA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTGGAACAGTGAACTCCTaGGAGCATCCCACTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: KGQQARHRHWLPQREVCGGTVNS*EHPTAF Trigger: GAAGGCAGTGGGATGCTCTCAGGAGTTCACTGTTCC...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTGAAAATTGTCTCTTGTaGGTCTCTGGAAGCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: KGQQARHRHWLPQREVCGENCLL*VSGSSL Trigger: CAAGCTGCTTCCAGAGACTCACAAGAGACAATTTTC...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTTCTCTGGAAGCAGCTTaGTGTAGGGCCTTGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPSLEAA*CRALRQ Trigger: TTGCCTCAAGGCCCTACAGCAAGCTGCTTCCAGAGA...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTATTCTCAAGGTCATATaGGGTGACAGATTACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KGQQARHRHWLPQREVCGILKVI*GDRLQG Trigger: TCCCTGTAATCTGTCACCGCATATGACCTTGAGAAT...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTTCTCTTGTGAGTCTCTaGAAGCAGCTTGCTGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFSLVSL*KQLAVG Trigger: CCCTACAGCAAGCTGCTTCCAGAGACTCACAAGAGA...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTCAAGGTCATATGCGGTaGCAGATTACAGGGACACAC | + |
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Preference number: 2 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPQGHMR*QITGTH Trigger: GTGTGTCCCTGTAATCTGTCACCGCATATGACCTTG...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCCAGCTGACGTTTATTTATTTGACAGTGGATGACCAAGAAGCAAAAATGGCAAGACACAGACACTaGCTCCCACAGCGAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SGQLTFIYLTVDDQEAKMARHRH*LPQREV Trigger: CACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGC...CATTTTTGCTTCTTGGTCATCCACTGTCAAATAAATAAACGTCAGCTGGCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029575.12 |
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| 3UTR-3UTR TCA 90 bp | CCCACTGCCTTCTCACATGATGGCTCAGTCCTTTTTATTTTCAACAACCATGTAGCTGGCACATTTCAGTaGTCCATGCAGAGTAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PTAFSHDGSVLFIFNNHVAGTFQ*SMQSRL Trigger: GAGCCTACTCTGCATGGATCACTGAAATGTGCCAGC...TACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACTGCCTTCTCACATGATGGCTCAGTCCTTTTTATTTTCAACAACCATGTATCTCTGGAAGCAGCTTaGTGTAGGGCCTTGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: PTAFSHDGSVLFIFNNHVSLEAA*CRALRQ Trigger: TTGCCTCAAGGCCCTACAGCAAGCTGCTTCCAGAGA...TACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTATTCTCAAGGTCATATaGGGTGACAGATTACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPILKVI*GDRLQG Trigger: TCCCTGTAATCTGTCACCGCATATGACCTTGAGAAT...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTATAATGTCACCATCTTaGACAAAAGCTCTTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFIMSPS*TKALHR Trigger: CCTGTGAAGAGCTTTTGTCCAAGATGGTGACATTAT...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGGCATGGAGAAGCCACTaGAAACCCAGCGCGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKAWRSH*KPSAVF Trigger: AAACACCGCGCTGGGTTTTCAGTGGCTTCTCCATGC...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTATAATGTCACCATCTTaGACAAAAGCTCTTCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPIMSPS*TKALHR Trigger: CCTGTGAAGAGCTTTTGTCCAAGATGGTGACATTAT...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGATTCCTTGTTGCATACAAGTTACATATAAGAAACATGGCTGGCACATTGCATGGAGAAGCCACTaGAAACCCAGCGCGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TLIPCCIQVTYKKHGWHIAWRSH*KPSAVF Trigger: AAACACCGCGCTGGGTTTTCAGTGGCTTCTCCATGC...AATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTCAACTTCTTGGCTTTTaGAGGTCCATGTGTTTTATA | + |
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Preference number: 2 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPQLLGF*RSMCFI Trigger: TATAAAACACATGGACCTTCAAAAGCCAAGAAGTTG...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACGAAAATTGTCTCTTGTaGGTCTCTGGAAGCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLTWLFPIPQAFQASNKNENCLL*VSGSSL Trigger: CAAGCTGCTTCCAGAGACTCACAAGAGACAATTTTC...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACTGCCTTCTCACATGATGGCTCAGTCCTTTTTATTTTCAACAACCATGTAGAAAATTGTCTCTTGTaGGTCTCTGGAAGCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PTAFSHDGSVLFIFNNHVENCLL*VSGSSL Trigger: CAAGCTGCTTCCAGAGACTCACAAGAGACAATTTTC...TACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACTGCCTTCTCACATGATGGCTCAGTCCTTTTTATTTTCAACAACCATGTAGTAAGGCCAACTTCTTaGCTTTTGAAGGTCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: PTAFSHDGSVLFIFNNHVVRPTS*LLKVHV Trigger: CACATGGACCTTCAAAAGCCAAGAAGTTGGCCTTAC...TACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGTCTCTTGTGAGTCTCTaGAAGCAGCTTGCTGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKSLVSL*KQLAVG Trigger: CCCTACAGCAAGCTGCTTCCAGAGACTCACAAGAGA...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAAGCAAAAATGTATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTCTCTGGAAGCAGCTTaGTGTAGGGCCTTGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: PRSKNVLPNVDNQEAKVYSLEAA*CRALRQ Trigger: TTGCCTCAAGGCCCTACAGCAAGCTGCTTCCAGAGA...ATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAATACATTTTTGCTTCTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTAGTGGTGAACAAGGTCAAACCAAAGGACAGCAGGCAAGACACAGACACTATCCTGGGTTCTGTATaGAAACATTTTTGTGCAATA | + |
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Preference number: 2 (lower is better) Translates to: SVVVNKVKPKDSRQDTDTILGSV*KHFCAI Trigger: TATTGCACAAAAATGTTTCCATACAGAACCCAGGAT...AGTGTCTGTGTCTTGCCTGCTGTCCTTTGGTTTGACCTTGTTCACCACTACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAACCTGGCTCTCAACACTaGGTTCAGACTAAACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKPGSQH*VQTKLS Trigger: GGAGAGTTTAGTCTGAACTCAGTGTTGAGAGCCAGG...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAACAAGGTCATATGCGGTaGCAGATTACAGGGACACAC | + |
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Preference number: 2 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKQGHMR*QITGTH Trigger: GTGTGTCCCTGTAATCTGTCACCGCATATGACCTTG...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAAGCAAAAATGTATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTCTCTTGTGAGTCTCTaGAAGCAGCTTGCTGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: PRSKNVLPNVDNQEAKVYSLVSL*KQLAVG Trigger: CCCTACAGCAAGCTGCTTCCAGAGACTCACAAGAGA...ATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAATACATTTTTGCTTCTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 |
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| 3UTR-3UTR CCA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGGGAAGGTCTTGCAGTaGAACTTGGGTGGTCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKGKVLQ*NLGGQY Trigger: ATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTCACTGCCTTCTCACATaGTGGCTCAGTCCTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: KCGQPRSKSVLPNVDKACHCLLT*WLSPFY Trigger: ATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTG...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTGATTCCTTGTTGCATACAAGTTACATATAAGAAACATGGCTGGCACATTGTAAGGCCAACTTCTTaGCTTTTGAAGGTCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: TLIPCCIQVTYKKHGWHIVRPTS*LLKVHV Trigger: CACATGGACCTTCAAAAGCCAAGAAGTTGGCCTTAC...AATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTGCAGTGGAACTTGGGTaGTCAGTATTCTCCTATTTT | + |
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Preference number: 2 (lower is better) Translates to: KCGQPRSKSVLPNVDKACAVELG*SVFSYF Trigger: AAAATAGGAGAATACTGACCACCCAAGTTCCACTGC...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGCAACTTCTTGGCTTTTaGAGGTCCATGTGTTTTATA | + |
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Preference number: 2 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKQLLGF*RSMCFI Trigger: TATAAAACACATGGACCTTCAAAAGCCAAGAAGTTG...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTATAATGTCACCATCTTaGACAAAAGCTCTTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: KCGQPRSKSVLPNVDKACIMSPS*TKALHR Trigger: CCTGTGAAGAGCTTTTGTCCAAGATGGTGACATTAT...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGATTCCTTGTTGCATACAAGTTACATATAAGAAACATGGCTGGCACATTCAACTTCTTGGCTTTTaGAGGTCCATGTGTTTTATA | + |
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Preference number: 2 (lower is better) Translates to: TLIPCCIQVTYKKHGWHIQLLGF*RSMCFI Trigger: TATAAAACACATGGACCTTCAAAAGCCAAGAAGTTG...AATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CCA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAATCCTGGGTTCTGTATaGAAACATTTTTGTGCAATA | + |
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Preference number: 2 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKILGSV*KHFCAI Trigger: TATTGCACAAAAATGTTTCCATACAGAACCCAGGAT...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR CCA 72 bp | GGTCAAACCAAAGGACAGCAGGCAAGACACAGACACTaGCTCCCACAGCGAGAGGTGTGTGGTAGGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: GQTKGQQARHRH*LPQREVCGRNS Trigger: ACTGTTCCTACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTTGGTTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTGGTAAGGCCAACTTCTaGGCTTTTGAAGGTCCATGT | + |
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Preference number: 3 (lower is better) Translates to: KGQQARHRHWLPQREVCGGKANF*AFEGPC Trigger: ACATGGACCTTCAAAAGCCAAGAAGTTGGCCTTACC...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTCCAACTTCTTGGCTTTaGAAGGTCCATGTGTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: KGQQARHRHWLPQREVCGPTSWL*KVHVFY Trigger: ATAAAACACATGGACCTTCAAAAGCCAAGAAGTTGG...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTGGTAAGGCCAACTTCTaGGCTTTTGAAGGTCCATGT | + |
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Preference number: 3 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFGKANF*AFEGPC Trigger: ACATGGACCTTCAAAAGCCAAGAAGTTGGCCTTACC...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR GCA 72 bp | AGACAAACAGACGCTGAACTGACGGCGGGAAGGTCTTaGAGTGGAACTTGGGTGGTCAGTATTCTCCTATTT | + |
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Preference number: 3 (lower is better) Translates to: RQTDAELTAGRS*SGTWVVSILLF Trigger: AAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCCGCCGTCAGTTCAGCGTCTGTTTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCCAGCTGACGTTTATTTATTTGACAGTGGATGACCAAGAAGCAAAAATGGACGGCGGGAAGGTCTaGCAGTGGAACTTGGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SGQLTFIYLTVDDQEAKMDGGKV*QWNLGG Trigger: ACCACCCAAGTTCCACTGCAAGACCTTCCCGCCGTC...CATTTTTGCTTCTTGGTCATCCACTGTCAAATAAATAAACGTCAGCTGGCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029575.12 |
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| 3UTR TCA 72 bp | ACACCGGCAACCAGGAATTTTCCTGGCTCTCAACACTaGGTTCAGACTAAACTCTCCTCACATGGCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TPATRNFPGSQH*VQTKLSSHGFS Trigger: GGAAAAGCCATGTGAGGAGAGTTTAGTCTGAACTCAGTGTTGAGAGCCAGGAAAATTCCTGGTTGCCGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACGGTAAGGCCAACTTCTaGGCTTTTGAAGGTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LLTWLFPIPQAFQASNKNGKANF*AFEGPC Trigger: ACATGGACCTTCAAAAGCCAAGAAGTTGGCCTTACC...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| 3UTR TCA 72 bp | AGTGAACTCCTGAGAGCATCCCACTGCCTTCTCACATaGTGGCTCAGTCCTTTTTATTTTCAACAACCATGT | + |
|
Preference number: 3 (lower is better) Translates to: SELLRASHCLLT*WLSPFYFQQPC Trigger: ACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGGATGCTCTCAGGAGTTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| 3UTR GCA 72 bp | GCGGTGACAGATTACAGGGACACACTGATTCCTTGTTaGATACAAGTTACATATAAGAAACATGGCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AVTDYRDTLIPC*IQVTYKKHGWH Trigger: GTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGTGTCCCTGTAATCTGTCACCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGCCAGCTGACGTTTATTTATTTGACAGTGGATGACCAAGAAGCAAAAATGGGACACACTGATTCCTaGTTGCATACAAGTTACATA | + |
|
Preference number: 3 (lower is better) Translates to: SGQLTFIYLTVDDQEAKMGHTDS*LHTSYI Trigger: TATGTAACTTGTATGCAACAAGGAATCAGTGTGTCC...CATTTTTGCTTCTTGGTCATCCACTGTCAAATAAATAAACGTCAGCTGGCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029575.12 |
||
| 3UTR TCA 72 bp | GCTTCAAATAAAAACAATCGACCTTCACCGAAAAGCTaGAAATTGTCTCTTGTGAGTCTCTGGAAGCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ASNKNNRPSPKS*KLSLVSLWKQL Trigger: AAGCTGCTTCCAGAGACTCACAAGAGACAATTTTCAGCTTTTCGGTGAAGGTCGATTGTTTTTATTTGAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| 3UTR TCA 72 bp | CAGTGGCCAGCTGACGTTTATTTATTTGACAGTGGATaGCCAAGAAGCAAAAATGTATTACCAAATGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QWPADVYLFDSG*PRSKNVLPNVD Trigger: GTCCACATTTGGTAATACATTTTTGCTTCTTGGTCATCCACTGTCAAATAAATAAACGTCAGCTGGCCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029575.12 |
||
| CDS-3UTR TCA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTGCATCTTGTCTTCTTTaGTGTTGGGGAGTAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQQARHRHWLPQREVCGASCLL*CWGVSW Trigger: CCAACTTACTCCCCAACATCAAAGAAGACAAGATGC...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGTGGTGAACAAGGTCAAACCAAAGGACAGCAGGCAAGACACAGACACTATGACAGGGATCGGGTaGGGCCCTAGAGAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVVVNKVKPKDSRQDTDTMTGIG*GPREFH Trigger: GTGGAATTCTCTAGGGCCTCACCCGATCCCTGTCAT...AGTGTCTGTGTCTTGCCTGCTGTCCTTTGGTTTGACCTTGTTCACCACTACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTTCCTGGCTCTCAACAGCTGCAGGCTGCTTCTaGAAGAGTTCCAGGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CEMDQKDTGNQEFSWLSTAAGCF*KSSRYL Trigger: CAAATACCTGGAACTCTTCCAGAAGCAGCCTGCAGC...TGTTGAGAGCCAGGAAAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACGCACTCGAATCCCCATaGCTCTTCCCGGAAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLFPIPQAFQASNKNALESP*LFPEVC Trigger: GCAAACTTCCGGGAAGAGTCATGGGGATTCGAGTGC...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106502.2 |
||
| CDS-3UTR GCA 90 bp | CCCACTGCCTTCTCACATGATGGCTCAGTCCTTTTTATTTTCAACAACCATGTATGGACGGCTGCAGGCTaGTTCTGGAAGAGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTAFSHDGSVLFIFNNHVWTAAG*FWKSSR Trigger: CCTGGAACTCTTCCAGAAGCAGCCTGCAGCCGTCCA...TACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTAGTGGTGAACAAGGTCAAACCAAAGGACAGCAGGCAAGACACAGACACTGCTGCAGGCTGCTTCTaGAAGAGTTCCAGGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVVVNKVKPKDSRQDTDTAAGCF*KSSRYL Trigger: CAAATACCTGGAACTCTTCCAGAAGCAGCCTGCAGC...AGTGTCTGTGTCTTGCCTGCTGTCCTTTGGTTTGACCTTGTTCACCACTACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTGCATCTTGTCTTCTTTaGTGTTGGGGAGTAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPASCLL*CWGVSW Trigger: CCAACTTACTCCCCAACATCAAAGAAGACAAGATGC...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACCTCTTCCCGGAAGTTTaGAGATGTGGCAACCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLFPIPQAFQASNKNLFPEV*RCGNPS Trigger: TGAGGGGTTGCCACATCTGCAAACTTCCGGGAAGAG...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTAAATTGCTGCCAAATTaGGAAAGCGAAAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFKLLPN*ESENKV Trigger: GACCTTGTTTTCGCTTTCTCAATTTGGCAGCAATTT...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTACAAATCCTATGATCTaGTCAGGAAATTGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFTNPMI*SGNCCQ Trigger: TTGGCAGCAATTTCCTGATCAGATCATAGGATTTGT...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTTCCTGGCTCTCAACAAAATTGCTGCCAAATTaGGAAAGCGAAAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CEMDQKDTGNQEFSWLSTKLLPN*ESENKV Trigger: GACCTTGTTTTCGCTTTCTCAATTTGGCAGCAATTT...TGTTGAGAGCCAGGAAAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTTTTGTTTGCTGTTTGTaGTTTGAAGATGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFFVCCL*FEDDRD Trigger: ATCCCTGTCATCTTCAAACCACAAACAGCAAACAAA...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACGCGAAAACAAGGTCCTaGGCACTAATGAGTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLFPIPQAFQASNKNAKTRS*ALMSVS Trigger: TGACACACTCATTAGTGCCCAGGACCTTGTTTTCGC...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTGCACTCGAATCCCCATaGCTCTTCCCGGAAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KCGQPRSKSVLPNVDKACALESP*LFPEVC Trigger: GCAAACTTCCGGGAAGAGTCATGGGGATTCGAGTGC...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACGCATCTTGTCTTCTTTaGTGTTGGGGAGTAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLFPIPQAFQASNKNASCLL*CWGVSW Trigger: CCAACTTACTCCCCAACATCAAAGAAGACAAGATGC...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTTTTGTTTGCTGTTTGTaGTTTGAAGATGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPFVCCL*FEDDRD Trigger: ATCCCTGTCATCTTCAAACCACAAACAGCAAACAAA...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAGCAAAAATGTATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATATGACAGGGATCGGGTaGGGCCCTAGAGAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRSKNVLPNVDNQEAKVYMTGIG*GPREFH Trigger: GTGGAATTCTCTAGGGCCTCACCCGATCCCTGTCAT...ATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAATACATTTTTGCTTCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGATTCCTTGTTGCATACAAGTTACATATAAGAAACATGGCTGGCACATTCTCTTCCCGGAAGTTTaGAGATGTGGCAACCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLIPCCIQVTYKKHGWHILFPEV*RCGNPS Trigger: TGAGGGGTTGCCACATCTGCAAACTTCCGGGAAGAG...AATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106502.2 |
||
| 3UTR CAA 72 bp | CTTCACAGGAAATCCTATCCCGGTAAGGCCAACTTCTaGGCTTTTGAAGGTCCATGTGTTTTATATTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHRKSYPGKANF*AFEGPCVLYSR Trigger: TCTAGAATATAAAACACATGGACCTTCAAAAGCCAAGAAGTTGGCCTTACCGGGATAGGATTTCCTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACTTTGTTTGCTGTTTGTaGTTTGAAGATGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLFPIPQAFQASNKNFVCCL*FEDDRD Trigger: ATCCCTGTCATCTTCAAACCACAAACAGCAAACAAA...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGATTCCTTGTTGCATACAAGTTACATATAAGAAACATGGCTGGCACATTGCGAAAACAAGGTCCTaGGCACTAATGAGTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLIPCCIQVTYKKHGWHIAKTRS*ALMSVS Trigger: TGACACACTCATTAGTGCCCAGGACCTTGTTTTCGC...AATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CCA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCTGCAGGCTGCTTCTaGAAGAGTTCCAGGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKAAGCF*KSSRYL Trigger: CAAATACCTGGAACTCTTCCAGAAGCAGCCTGCAGC...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGGAGGAAGTAGAGACGTaGTTTCTAGGTACAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKEEVET*FLGTNP Trigger: AGGATTTGTACCTAGAAAGCACGTCTCTACTTCCTC...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGACAAATCCTATGATCTaGTCAGGAAATTGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKTNPMI*SGNCCQ Trigger: TTGGCAGCAATTTCCTGATCAGATCATAGGATTTGT...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTAAATTGCTGCCAAATTaGGAAAGCGAAAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCGQPRSKSVLPNVDKACKLLPN*ESENKV Trigger: GACCTTGTTTTCGCTTTCTCAATTTGGCAGCAATTT...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR GCA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGAGGAAGTAGAGACGTaGTTTCTAGGTACAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKEEVET*FLGTNP Trigger: AGGATTTGTACCTAGAAAGCACGTCTCTACTTCCTC...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAGCAAAAATGTATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATACAAATCCTATGATCTaGTCAGGAAATTGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRSKNVLPNVDNQEAKVYTNPMI*SGNCCQ Trigger: TTGGCAGCAATTTCCTGATCAGATCATAGGATTTGT...ATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAATACATTTTTGCTTCTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 |
||
| CDS CCA 90 bp | TATTTGCTGTTGAAGAAGGAGGCTCCGATGAGCACCATGGAGTACTaGTCGCCATTCCCGGGCCCCGGTGTCTGCAGCTCAAAGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: YLLLKKEAPMSTMEY*SPFPGPGVCSSKPP Trigger: CGGAGGCTTTGAGCTGCAGACACCGGGGCCCGGGAATGGCGACCAGTACTCCATGGTGCTCATCGGAGCCTCCTTCTTCAACAGCAAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS CCA 90 bp | TTCATAGCGATGTCGTCACAGTTCTGCGTCTCATCGATCAGCGCGTaGACGGCTGCAGGCTGCTTCTGGAAGAGTTCCAGGTATTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIAMSSQFCVSSISA*TAAGCFWKSSRYLL Trigger: CAGCAAATACCTGGAACTCTTCCAGAAGCAGCCTGCAGCCGTCCACGCGCTGATCGATGAGACGCAGAACTGTGACGACATCGCTATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTTCCAGGTATTTGCTGTaGAAGAAGGAGGCTCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: KGQQARHRHWLPQREVCGSRYLL*KKEAPM Trigger: CATCGGAGCCTCCTTCTTCAACAGCAAATACCTGGA...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTAATATCCCTGAAGGCTaGCCAGTGTGCCTGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPNIPEG*PVCLVT Trigger: CGTCACCAGGCACACTGGCAAGCCTTCAGGGATATT...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTTCCTGGCTCTCAACAAATATCCCTGAAGGCTaGCCAGTGTGCCTGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: CEMDQKDTGNQEFSWLSTNIPEG*PVCLVT Trigger: CGTCACCAGGCACACTGGCAAGCCTTCAGGGATATT...TGTTGAGAGCCAGGAAAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS TCA 90 bp | CTCATTTTGTTTGCTGTTTGTGGTTTGAAGATGACAGGGATCGGGTaGGGCCCTAGAGAATTCCACAACTCCTCTGGGCCCTTCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LILFAVCGLKMTGIG*GPREFHNSSGPFSP Trigger: GGGAGAGAAGGGCCCAGAGGAGTTGTGGAATTCTCTAGGGCCTCACCCGATCCCTGTCATCTTCAAACCACAAACAGCAAACAAAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTAGCATCTTGTCTTCTTaGATGTTGGGGAGTAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGQQARHRHWLPQREVCGSILSS*MLGSKL Trigger: CAACTTACTCCCCAACATCAAAGAAGACAAGATGCT...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTTCCAGGTATTTGCTGTaGAAGAAGGAGGCTCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFSRYLL*KKEAPM Trigger: CATCGGAGCCTCCTTCTTCAACAGCAAATACCTGGA...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTTCCTGGCTCTCAACACGCAGAGTGAGCATCTaGTCTTCTTTGATGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CEMDQKDTGNQEFSWLSTRRVSI*SSLMLG Trigger: CCCCAACATCAAAGAAGACAAGATGCTCACTCTGCG...TGTTGAGAGCCAGGAAAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | AAAGGACAGCAGGCAAGACACAGACACTGGCTCCCACAGCGAGAGGTGTGTGGTCATTTTGTTTGCTGTTaGTGGTTTGAAGATGACAGG | + |
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Preference number: 5 (lower is better) Translates to: KGQQARHRHWLPQREVCGHFVCC*WFEDDR Trigger: CCTGTCATCTTCAAACCACAAACAGCAAACAAAATG...ACCACACACCTCTCGCTGTGGGAGCCAGTGTCTGTGTCTTGCCTGCTGTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTTTTGCTGTTTGTGGTTaGAAGATGACAGGGATCGGG | + |
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Preference number: 5 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPFAVCG*KMTGIG Trigger: CCCGATCCCTGTCATCTTCAAACCACAAACAGCAAA...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CCA 90 bp | TCGTCTACCATCAACACCGCGTTGGTCTCCACTTCAGGGAAGACCTaGAGTCGGTTTCTCATTTTGTTTGCTGTTTGTGGTTTGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: SSTINTALVSTSGKT*SRFLILFAVCGLKM Trigger: CATCTTCAAACCACAAACAGCAAACAAAATGAGAAACCGACTCCAGGTCTTCCCTGAAGTGGAGACCAACGCGGTGTTGATGGTAGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | TCAGTAGTGGTGAACAAGGTCAAACCAAAGGACAGCAGGCAAGACACAGACACTAAGAGGTCTGTTCTGTaGTATGTCTGCATGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: SVVVNKVKPKDSRQDTDTKRSVL*YVCMMR Trigger: CCTCATCATGCAGACATACAACAGAACAGACCTCTT...AGTGTCTGTGTCTTGCCTGCTGTCCTTTGGTTTGACCTTGTTCACCACTACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | GGGCTCAGTCAGTTCTGTGAGATGGACCAGAAAGACACCGGCAACCAGGAATTTCATTTTGTTTGCTGTTaGTGGTTTGAAGATGACAGG | + |
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Preference number: 5 (lower is better) Translates to: GLSQFCEMDQKDTGNQEFHFVCC*WFEDDR Trigger: CCTGTCATCTTCAAACCACAAACAGCAAACAAAATG...AAATTCCTGGTTGCCGGTGTCTTTCTGGTCCATCTCACAGAACTGACTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTATTCCGGAATACCCGTaGGTTTCTTTTTCCAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPIPEYP*VSFSKL Trigger: CAACTTGGAAAAAGAAACCAACGGGTATTCCGGAAT...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGGTCTTGCAGTGGAACTTGGGTGGTCAGTATTCTCCTATTTTCACGCCTCATTTTGTTTGCTGTTaGTGGTTTGAAGATGACAGG | + |
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Preference number: 5 (lower is better) Translates to: GKVLQWNLGGQYSPIFTPHFVCC*WFEDDR Trigger: CCTGTCATCTTCAAACCACAAACAGCAAACAAAATG...AGGCGTGAAAATAGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGAATATCCCTGAAGGCTaGCCAGTGTGCCTGGTGACG | + |
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Preference number: 5 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKNIPEG*PVCLVT Trigger: CGTCACCAGGCACACTGGCAAGCCTTCAGGGATATT...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS TCA 90 bp | TTCTTTTTCCAAGTTGACCATGTTTATGGGTTTCACGAATATCCCTaGAGGCTTGCCAGTGTGCCTGGTGACGAGGAAATTCATAGCGAT | + |
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Preference number: 5 (lower is better) Translates to: FFFQVDHVYGFHEYP*RLASVPGDEEIHSD Trigger: ATCGCTATGAATTTCCTCGTCACCAGGCACACTGGCAAGCCTTCAGGGATATTCGTGAAACCCATAAACATGGTCAACTTGGAAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTACTCTTCCCGGAAGTTaGCAGATGTGGCAACCCCTC | + |
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Preference number: 5 (lower is better) Translates to: KCGQPRSKSVLPNVDKACTLPGS*QMWQPL Trigger: GAGGGGTTGCCACATCTGCAAACTTCCGGGAAGAGT...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | ACACTGATTCCTTGTTGCATACAAGTTACATATAAGAAACATGGCTGGCACATTACTCTTCCCGGAAGTTaGCAGATGTGGCAACCCCTC | + |
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Preference number: 5 (lower is better) Translates to: TLIPCCIQVTYKKHGWHITLPGS*QMWQPL Trigger: GAGGGGTTGCCACATCTGCAAACTTCCGGGAAGAGT...AATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | CCCACTGCCTTCTCACATGATGGCTCAGTCCTTTTTATTTTCAACAACCATGTATTTGCTGTTTGTGGTTaGAAGATGACAGGGATCGGG | + |
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Preference number: 5 (lower is better) Translates to: PTAFSHDGSVLFIFNNHVFAVCG*KMTGIG Trigger: CCCGATCCCTGTCATCTTCAAACCACAAACAGCAAA...TACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGTCCAGGTATTTGCTGTaGAAGAAGGAGGCTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKSRYLL*KKEAPM Trigger: CATCGGAGCCTCCTTCTTCAACAGCAAATACCTGGA...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTCGCAGAGTGAGCATCTaGTCTTCTTTGATGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: KCGQPRSKSVLPNVDKACRRVSI*SSLMLG Trigger: CCCCAACATCAAAGAAGACAAGATGCTCACTCTGCG...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCACATGGCTTTTCCCTATACCGCAGGCATTTCAGGCTTCAAATAAAAACAGTCGGTTTCTCATTTaGTTTGCTGTTTGTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: LLTWLFPIPQAFQASNKNSRFLI*FAVCGL Trigger: CAAACCACAAACAGCAAACAAAATGAGAAACCGACT...GTTTTTATTTGAAGCCTGAAATGCCTGCGGTATAGGGAAAAGCCATGTGAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | CCCACTGCCTTCTCACATGATGGCTCAGTCCTTTTTATTTTCAACAACCATGTAATTCCGGAATACCCGTaGGTTTCTTTTTCCAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: PTAFSHDGSVLFIFNNHVIPEYP*VSFSKL Trigger: CAACTTGGAAAAAGAAACCAACGGGTATTCCGGAAT...TACATGGTTGTTGAAAATAAAAAGGACTGAGCCATCATGTGAGAAGGCAGTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | ACACTGATTCCTTGTTGCATACAAGTTACATATAAGAAACATGGCTGGCACATTTTTGCTGTTTGTGGTTaGAAGATGACAGGGATCGGG | + |
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Preference number: 5 (lower is better) Translates to: TLIPCCIQVTYKKHGWHIFAVCG*KMTGIG Trigger: CCCGATCCCTGTCATCTTCAAACCACAAACAGCAAA...AATGTGCCAGCCATGTTTCTTATATGTAACTTGTATGCAACAAGGAATCAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | AAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAGCATGTAAGAGGTCTGTTCTGTaGTATGTCTGCATGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: KCGQPRSKSVLPNVDKACKRSVL*YVCMMR Trigger: CCTCATCATGCAGACATACAACAGAACAGACCTCTT...ACATGCTTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTGATAGATTATTTCTTTTCAGTAGTGGTGAACAAGGTCAAACCAAAGATTCCGGAATACCCGTaGGTTTCTTTTTCCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGLIDYFFSVVVNKVKPKIPEYP*VSFSKL Trigger: CAACTTGGAAAAAGAAACCAACGGGTATTCCGGAAT...CTTTGGTTTGACCTTGTTCACCACTACTGAAAAGAAATAATCTATCAGGCCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAAAGAGGTCTGTTCTGTaGTATGTCTGCATGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKKRSVL*YVCMMR Trigger: CCTCATCATGCAGACATACAACAGAACAGACCTCTT...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | ATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATTACCAAATGTGGACAAAAGCATCTTGTCTTCTTaGATGTTGGGGAGTAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: ITKCGQPRSKSVLPNVDKSILSS*MLGSKL Trigger: CAACTTACTCCCCAACATCAAAGAAGACAAGATGCT...TTTGTCCACATTTGGTAATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS-3UTR CAA 90 bp | CCAAGAAGCAAAAATGTATTACCAAATGTGGACAACCAAGAAGCAAAAGTGTATAGCATCTTGTCTTCTTaGATGTTGGGGAGTAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRSKNVLPNVDNQEAKVYSILSS*MLGSKL Trigger: CAACTTACTCCCCAACATCAAAGAAGACAAGATGCT...ATACACTTTTGCTTCTTGGTTGTCCACATTTGGTAATACATTTTTGCTTCTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 |
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| CDS CCA 72 bp | TTGAAGAAGGAGGCTCCGATGAGCACCATGGAGTACTaGTCGCCATTCCCGGGCCCCGGTGTCTGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LKKEAPMSTMEY*SPFPGPGVCSS Trigger: TGAGCTGCAGACACCGGGGCCCGGGAATGGCGACCAGTACTCCATGGTGCTCATCGGAGCCTCCTTCTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS TCA 72 bp | TGGTCAAAGCCCCCGCTACCAGCAGCAACACAAGGATaGCCACCAGGGAGAACCGGAGCACTCGAATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: WSKPPLPAATQG*PPGRTGALESP Trigger: TGGGGATTCGAGTGCTCCGGTTCTCCCTGGTGGTCATCCTTGTGTTGCTGCTGGTAGCGGGGGCTTTGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 72 bp | ACGGCTGCAGGCTGCTTCTGGAAGAGTTCCAGGTATTaGCTGTTGAAGAAGGAGGCTCCGATGAGCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: TAAGCFWKSSRY*LLKKEAPMSTM Trigger: CATGGTGCTCATCGGAGCCTCCTTCTTCAACAGCAAATACCTGGAACTCTTCCAGAAGCAGCCTGCAGCCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 72 bp | TCCCTACGCAGAGTGAGCATCTTGTCTTCTTTGATGTaGGGGAGTAAGTTGGTCAAAGCCCCCGCTACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLRRVSILSSLM*GSKLVKAPATS Trigger: GCTGGTAGCGGGGGCTTTGACCAACTTACTCCCCAACATCAAAGAAGACAAGATGCTCACTCTGCGTAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 72 bp | AGGGTGAATGAATCCAGGGCCGACTTGCTCGGGGATTaGATCTCCCTACGCAGAGTGAGCATCTTGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RVNESRADLLGD*ISLRRVSILSS Trigger: AGAAGACAAGATGCTCACTCTGCGTAGGGAGATCAAATCCCCGAGCAAGTCGGCCCTGGATTCATTCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 90 bp | CTACGCAGAGTGAGCATCTTGTCTTCTTTGATGTTGGGGAGTAAGTaGGTCAAAGCCCCCGCTACCAGCAGCAACACAAGGATGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: LRRVSILSSLMLGSK*VKAPATSSNTRMTT Trigger: GGTGGTCATCCTTGTGTTGCTGCTGGTAGCGGGGGCTTTGACCAACTTACTCCCCAACATCAAAGAAGACAAGATGCTCACTCTGCGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 72 bp | GTGAGCATCTTGTCTTCTTTGATGTTGGGGAGTAAGTaGGTCAAAGCCCCCGCTACCAGCAGCAACACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSILSSLMLGSK*VKAPATSSNTR Trigger: CCTTGTGTTGCTGCTGGTAGCGGGGGCTTTGACCAACTTACTCCCCAACATCAAAGAAGACAAGATGCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 90 bp | GATTTGATCTCCCTACGCAGAGTGAGCATCTTGTCTTCTTTGATGTaGGGGAGTAAGTTGGTCAAAGCCCCCGCTACCAGCAGCAACACA | + |
|
Preference number: 6 (lower is better) Translates to: DLISLRRVSILSSLM*GSKLVKAPATSSNT Trigger: TGTGTTGCTGCTGGTAGCGGGGGCTTTGACCAACTTACTCCCCAACATCAAAGAAGACAAGATGCTCACTCTGCGTAGGGAGATCAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 90 bp | TGCATGATGAGGGTGAATGAATCCAGGGCCGACTTGCTCGGGGATTaGATCTCCCTACGCAGAGTGAGCATCTTGTCTTCTTTGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CMMRVNESRADLLGD*ISLRRVSILSSLML Trigger: CAACATCAAAGAAGACAAGATGCTCACTCTGCGTAGGGAGATCAAATCCCCGAGCAAGTCGGCCCTGGATTCATTCACCCTCATCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS GCA 72 bp | ATGGGTTTCACGAATATCCCTGAAGGCTTGCCAGTGTaGCTGGTGACGAGGAAATTCATAGCGATGTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MGFTNIPEGLPV*LVTRKFIAMSS Trigger: TGACGACATCGCTATGAATTTCCTCGTCACCAGGCACACTGGCAAGCCTTCAGGGATATTCGTGAAACCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CAA 72 bp | TTGATCTCCCTACGCAGAGTGAGCATCTTGTCTTCTTaGATGTTGGGGAGTAAGTTGGTCAAAGCCCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LISLRRVSILSS*MLGSKLVKAPA Trigger: AGCGGGGGCTTTGACCAACTTACTCCCCAACATCAAAGAAGACAAGATGCTCACTCTGCGTAGGGAGATCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CCA 72 bp | ATCAACACCGCGTTGGTCTCCACTTCAGGGAAGACCTaGAGTCGGTTTCTCATTTTGTTTGCTGTTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: INTALVSTSGKT*SRFLILFAVCG Trigger: ACCACAAACAGCAAACAAAATGAGAAACCGACTCCAGGTCTTCCCTGAAGTGGAGACCAACGCGGTGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS CCA 72 bp | AATTGCTGCCAAATTGAGAAAGCGAAAACAAGGTCCTaGGCACTAATGAGTGTGTCATCGTCTACCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NCCQIEKAKTRS*ALMSVSSSTIN Trigger: GTTGATGGTAGACGATGACACACTCATTAGTGCCCAGGACCTTGTTTTCGCTTTCTCAATTTGGCAGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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| CDS TCA 72 bp | GTAGAGACGTGCTTTCTAGGTACAAATCCTATGATCTaGTCAGGAAATTGCTGCCAAATTGAGAAAGCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VETCFLGTNPMI*SGNCCQIEKAK Trigger: TTTCGCTTTCTCAATTTGGCAGCAATTTCCTGATCAGATCATAGGATTTGTACCTAGAAAGCACGTCTCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029575.12 ENSMUST00000106501.8 ENSMUST00000106502.2 |
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