Pregenerated sensors for EXTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028838Ensembl transcript IDs: ENSMUST00000030643.3
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGATGAGAGCAGGACTCCGCCCTACGGAGCTTGCAGGCCGGCCCTaGGGCCTCGTGATGTGCTCAAGGCCACTCGGCGTGAATCGTGCG | + |
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Preference number: 1 (lower is better) Translates to: EMRAGLRPTELAGRP*GLVMCSRPLGVNRA Trigger: CGCACGATTCACGCCGAGTGGCCTTGAGCACATCACGAGGCCCCAGGGCCGGCCTGCAAGCTCCGTAGGGCGGAGTCCTGCTCTCATCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 90 bp | CTCCGCCCTACGGAGCTTGCAGGCCGGCCCTGGGGCCTCGTGATGTaGTCAAGGCCACTCGGCGTGAATCGTGCGAGGACTTCGAGATCA | + |
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Preference number: 1 (lower is better) Translates to: LRPTELAGRPWGLVM*SRPLGVNRARTSRS Trigger: TGATCTCGAAGTCCTCGCACGATTCACGCCGAGTGGCCTTGAGCACATCACGAGGCCCCAGGGCCGGCCTGCAAGCTCCGTAGGGCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 90 bp | ATTTCAGGGAACAGGATCAGCCTGTACACCGGCCTGTGCGAAACGTaGCAAACGCAACCCCACTGCAGCTGGAGAAGGCCCCGGCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: ISGNRISLYTGLCET*QTQPHCSWRRPRPS Trigger: TGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTTCGCACAGGCCGGTGTACAGGCTGATCCTGTTCCCTGAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR TCA 90 bp | AGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATaGGAGCAGGACTCCGCCCTACGGAGCTTGCAGGCCGGCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SYCSNIYSAPARPKR*EQDSALRSLQAGPG Trigger: CCCAGGGCCGGCCTGCAAGCTCCGTAGGGCGGAGTCCTGCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR TCA 90 bp | ACCTGTAACTCTAACACTTGGGAAACTGAGGCAGTAAGACTGCAGTaGGTTCCAAGCCAGCCTGGGTTACAGACTGGGACCTTGTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: TCNSNTWETEAVRLQ*VPSQPGLQTGTLSC Trigger: GCAAGACAAGGTCCCAGTCTGTAACCCAGGCTGGCTTGGAACTCACTGCAGTCTTACTGCCTCAGTTTCCCAAGTGTTAGAGTTACAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGCCTCCCCTCCCCTACTCCACTCTCACCTACAGGATGCTGAGGACAGCCGGCCCTGGGGCCTCGTaGTGTGCTCAAGGCCACTCG | + |
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Preference number: 2 (lower is better) Translates to: KQPPLPYSTLTYRMLRTAGPGAS*CAQGHS Trigger: CGAGTGGCCTTGAGCACATCACGAGGCCCCAGGGCC...GGCTGTCCTCAGCATCCTGTAGGTGAGAGTGGAGTAGGGGAGGGGAGGCTGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGAGAGCAGGACTCCGCCCTACGGAGCTTGCAGGCCGGCCCTGGGGCCTTCGACCAGGCAGAGATaGAGAGAAAGGCATTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RDESRTPPYGACRPALGPSTRQR*RERHFR Trigger: CCTGAAATGCCTTTCTCTGCATCTCTGCCTGGTCGA...AGGCCCCAGGGCCGGCCTGCAAGCTCCGTAGGGCGGAGTCCTGCTCTCATCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCGCAGTAAGACTGCAGTaGGTTCCAAGCCAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SHLQDAEDSPLPGDQPICAVRLQ*VPSQPG Trigger: CCCAGGCTGGCTTGGAACTCACTGCAGTCTTACTGC...GCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAATCCTGGTGTGTGCTTTGTACCGGGACCAGGAACTCCAGAGTAAGGGGCAACCCCACTGCAGCTaGAGAAGGCCCCGGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LEILVCALYRDQELQSKGQPHCS*RRPRPS Trigger: TGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTG...CCCCTTACTCTGGAGTTCCTGGTCCCGGTACAAAGCACACACCAGGATTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR GCA 90 bp | CACTCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCGTGTTCCACCACGCATaGCACCAGTTAATACTCTTG | + |
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Preference number: 2 (lower is better) Translates to: HSHLQDAEDSPLPGDQPIVFHHA*HQLILL Trigger: CAAGAGTATTAACTGGTGGCATGCGTGGTGGAACAC...GATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTTATCCGTAGTCTTTAACTCCATTCAGTCAGGCATTGTGGCTCACACCTGTGCCAGACCAAAGAGATaGGAGCAGGACTCCGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: ILSVVFNSIQSGIVAHTCARPKR*EQDSAL Trigger: TAGGGCGGAGTCCTGCTCTCATCTCTTTGGTCTGGC...ACAGGTGTGAGCCACAATGCCTGACTGAATGGAGTTAAAGACTACGGATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR CAA 90 bp | CCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTATaGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: PVFHHACHQLILLQL*LKYLQCTCQTKEMR Trigger: TCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR CAA 90 bp | CACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTaGCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: HILPVFHHACHQLIL*QLLLKYLQCTCQTK Trigger: TTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTGCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATCACCAAGGAGGTGAGTaGAGGTCTGACAGACATAGG | + |
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Preference number: 2 (lower is better) Translates to: TLAAIAQIFTVHLPDQRDHQGGE*RSDRHR Trigger: CCTATGTCTGTCAGACCTGCACTCACCTCCTTGGTG...ATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTTATCCGTAGTCTTTAACTCCATTCAGTCAGGCATTGTGGCTCACACCTGTTATTTACAGTGCACCTaGCAGACCAAAGAGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: ILSVVFNSIQSGIVAHTCYLQCT*QTKEMR Trigger: TCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATA...ACAGGTGTGAGCCACAATGCCTGACTGAATGGAGTTAAAGACTACGGATAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR CCA 72 bp | GCAGGACTCCGCCCTACGGAGCTTGCAGGCCGGCCCTaGGGCCTCGTGATGTGCTCAAGGCCACTCGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: AGLRPTELAGRP*GLVMCSRPLGV Trigger: CACGCCGAGTGGCCTTGAGCACATCACGAGGCCCCAGGGCCGGCCTGCAAGCTCCGTAGGGCGGAGTCCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | ACGGAGCTTGCAGGCCGGCCCTGGGGCCTCGTGATGTaGTCAAGGCCACTCGGCGTGAATCGTGCGAGGACT | + |
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Preference number: 3 (lower is better) Translates to: TELAGRPWGLVM*SRPLGVNRART Trigger: AGTCCTCGCACGATTCACGCCGAGTGGCCTTGAGCACATCACGAGGCCCCAGGGCCGGCCTGCAAGCTCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR CCA 72 bp | CTGTGCGAAACGTGCCAAACGCAACCCCACTGCAGCTaGAGAAGGCCCCGGCCCTCAGGGATCCCTGTAGCG | + |
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Preference number: 3 (lower is better) Translates to: LCETCQTQPHCS*RRPRPSGIPVA Trigger: CGCTACAGGGATCCCTGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTTCGCACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR TCA 72 bp | CTCCCCTCCCCTACTCCACTCTCACCTACAGGATGCTaGGGACAGCCCTCTTCCTGGCGACCAGCCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: LPSPTPLSPTGC*GQPSSWRPAHL Trigger: CAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGAGTGGAGTAGGGGAGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | AACAGGATCAGCCTGTACACCGGCCTGTGCGAAACGTaGCAAACGCAACCCCACTGCAGCTGGAGAAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: NRISLYTGLCET*QTQPHCSWRRP Trigger: GGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTTCGCACAGGCCGGTGTACAGGCTGATCCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | GCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTaGCAACAGCCCAAGTTTGCAGGCCAACGTGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: AEDSPLPGDQPI*QQPKFAGQRGV Trigger: AACTCCACGTTGGCCTGCAAACTTGGGCTGTTGGCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGGGCCTCGTGATGTGCTCAAGGCCACTCGGCGTGAATCGTGCGAGGACTAACCGGGACAGGACTTaGATCCATCTCTGTTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: PWGLVMCSRPLGVNRARTNRDRT*IHLCWF Trigger: GAACCAACAGAGATGGATCAAAGTCCTGTCCCGGTT...AGTCCTCGCACGATTCACGCCGAGTGGCCTTGAGCACATCACGAGGCCCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGAGCTCCGCCCTACGGAGCTaGCAGGCCGGCCCTGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: AAIAQIFTVHLPDQRDESSALRS*QAGPGA Trigger: GGCCCCAGGGCCGGCCTGCAAGCTCCGTAGGGCGGA...GCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | CCTCGTGATGTGCTCAAGGCCACTCGGCGTGAATCGTaGGAGGACTTCGAGATCACCAAGGAGGTGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: PRDVLKATRRES*EDFEITKEVSA Trigger: TGCACTCACCTCCTTGGTGATCTCGAAGTCCTCGCACGATTCACGCCGAGTGGCCTTGAGCACATCACGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | CAGGAACTCCAGAGTAAGGGGCAGCGTTATGTCTTGTaGACATTCTGCCCGTGTTCCACCACGCATGCCACC | + |
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Preference number: 3 (lower is better) Translates to: QELQSKGQRYVL*TFCPCSTTHAT Trigger: GGTGGCATGCGTGGTGGAACACGGGCAGAATGTGCACAAGACATAACGCTGCCCCTTACTCTGGAGTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | ATCGTGCGAGGACTTCGAGATCACCAAGGAGGTGAGTaGAGGTCTGACAGACATAGGTCGACCAGGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: IVRGLRDHQGGE*RSDRHRSTRQR Trigger: TCTCTGCCTGGTCGACCTATGTCTGTCAGACCTGCACTCACCTCCTTGGTGATCTCGAAGTCCTCGCACGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR TCA 72 bp | TCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATaGGAGCAGGACTCCGCCCTACGGAGCTTGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: SNIYSAPARPKR*EQDSALRSLQA Trigger: GGCCTGCAAGCTCCGTAGGGCGGAGTCCTGCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR TCA 72 bp | GATCCCTGTAGCGATTGGCCAACCGGGACAGGACTTTaGTCCATCTCTGTTGGTTCTCTCGTGTCTAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: DPCSDWPTGTGL*SISVGSLVSSR Trigger: TCTGCTAGACACGAGAGAACCAACAGAGATGGATCAAAGTCCTGTCCCGGTTGGCCAATCGCTACAGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR TCA 72 bp | TCTAACACTTGGGAAACTGAGGCAGTAAGACTGCAGTaGGTTCCAAGCCAGCCTGGGTTACAGACTGGGACC | + |
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Preference number: 3 (lower is better) Translates to: SNTWETEAVRLQ*VPSQPGLQTGT Trigger: GGTCCCAGTCTGTAACCCAGGCTGGCTTGGAACTCACTGCAGTCTTACTGCCTCAGTTTCCCAAGTGTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | AGTTTGCAGGCCAACGTGGAGTTCTGTCGTATTCCTTaGATGTTTTCATCCTGGGGTCTGCACACACCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLQANVEFCRIP*MFSSWGLHTPV Trigger: CACTGGTGTGTGCAGACCCCAGGATGAAAACATGCAAGGAATACGACAGAACTCCACGTTGGCCTGCAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR TCA 72 bp | TATCTTCGACTCCTGGCCTCTTTGTTCACGCTTGATTaGGTCTGGAAATCCTGGTGTGTGCTTTGTACCGGG | + |
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Preference number: 3 (lower is better) Translates to: YLRLLASLFTLD*VWKSWCVLCTG Trigger: CCCGGTACAAAGCACACACCAGGATTTCCAGACTCAATCAAGCGTGAACAAAGAGGCCAGGAGTCGAAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | CTCTTGCAGCTATTGCTCAAATATTTACAGTGCACCTaGCAGACCAAAGAGATGAGAGCAGGACTCCGCCCT | + |
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Preference number: 3 (lower is better) Translates to: LLQLLLKYLQCT*QTKEMRAGLRP Trigger: AGGGCGGAGTCCTGCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR GCA 72 bp | TTAATACTCTTGCAGCTATTGCTCAAATATTTACAGTaGACCTGCCAGACCAAAGAGATGAGAGCAGGACTC | + |
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Preference number: 3 (lower is better) Translates to: LILLQLLLKYLQ*TCQTKEMRAGL Trigger: GAGTCCTGCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAGTATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | AAGCAGCCTCCCCTCCCCTACTCCACTCTCACCTACAGGATGCTGAGGACAGCCGCTCCCAGCGGGGGCTaGGGAGCACGGGGATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KQPPLPYSTLTYRMLRTAAPSGG*GARGCS Trigger: GCTGCATCCCCGTGCTCCTCAGCCCCCGCTGGGAGC...GGCTGTCCTCAGCATCCTGTAGGTGAGAGTGGAGTAGGGGAGGGGAGGCTGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | AGAGATGAGAGCAGGACTCCGCCCTACGGAGCTTGCAGGCCGGCCCTGGGGCCTGTCTGCTGGGCTGAGTaGAGAGTAGCGGGAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RDESRTPPYGACRPALGPVCWAE*RVAGAF Trigger: GAAGGCTCCCGCTACTCTGCACTCAGCCCAGCAGAC...AGGCCCCAGGGCCGGCCTGCAAGCTCCGTAGGGCGGAGTCCTGCTCTCATCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | AAACGTGCCAAACGCAACCCCACTGCAGCTGGAGAAGGCCCCGGCCCTCAGGGAGGGAAGGGTCTCTCCTaGGTAGGTCTGCTGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KRAKRNPTAAGEGPGPQGGKGLS*VGLLGS Trigger: GGACCCCAGCAGACCTACCCAGGAGAGACCCTTCCC...TCCCTGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | TCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCGGTTGGGGACTGTGCTaGTGCAGCTTGCCGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SHLQDAEDSPLPGDQPICGWGLC*CSLPGA Trigger: GGCTCCCGGCAAGCTGCAGCAGCACAGTCCCCAACC...GCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | AAACGTGCCAAACGCAACCCCACTGCAGCTGGAGAAGGCCCCGGCCCTCAGGGACCGATACCGGGTCCTTaGACAACACCGGATCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: KRAKRNPTAAGEGPGPQGPIPGP*TTPDPD Trigger: GTCTGGATCCGGTGTTGTTCAAGGACCCGGTATCGG...TCCCTGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | CACTCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCAGCAGGCTCCCCAGGTaGAGCTGCTTCCCCGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: HSHLQDAEDSPLPGDQPISRLPR*SCFPER Trigger: TCTCTCGGGGAAGCAGCTGCACCTGGGGAGCCTGCT...GATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | TCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCCCTGTCCCAGCCTGGTaGAAGGGGCTGGGTAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: SHLQDAEDSPLPGDQPICPVPAW*KGLGRD Trigger: GTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGG...GCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | CACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCCAATCGCCTGTCCCAGCCTaGTGCAAGGGGCTGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: HLQDAEDSPLPGDQPICQSPVPA*CKGLGR Trigger: TCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGA...TTGGCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | GGCATTTCAGGGAACAGGATCAGCCTGTACACCGGCCTGTGCGAAACGTGCCAACACAGAAACTGGGTCTaGTGGCGCAGGGCGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: GISGNRISLYTGLCETCQHRNWV*WRRART Trigger: GGTCCTCGCCCTGCGCCAGCAGACCCAGTTTCTGTG...TTGGCACGTTTCGCACAGGCCGGTGTACAGGCTGATCCTGTTCCCTGAAATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | GCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTCAGCGGGGCCAGCCTTaGGAGCGCCCTGGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: AHSARVPPRMPPVNTLAAQRGQP*ERPGRG Trigger: TCCTCTTCCAGGGCGCTCCCAAGGCTGGCCCCGCTG...AGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | CACTCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCCTCCGGCACTGGTCGTaGATCCCCAGAATCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: HSHLQDAEDSPLPGDQPILRHWS*IPRIHW Trigger: CCAATGGATTCTGGGGATCCACGACCAGTGCCGGAG...GATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | GCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTCCCAGATCACGGCGCTaGAACTGCTCCCAGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: AHSARVPPRMPPVNTLAAPRSRR*NCSQGQ Trigger: CTGGCCCTGGGAGCAGTTTCAGCGCCGTGATCTGGG...AGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | TGCGAAACGTGCCAAACGCAACCCCACTGCAGCTGGAGAAGGCCCCGGCCCTCAATCAGCAATGATGGCTaGCTTGGTCCAGTCGATGAC | + |
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Preference number: 4 (lower is better) Translates to: CETCQTQPHCSWRRPRPSISNDG*LGPVDD Trigger: GTCATCGACTGGACCAAGGCAGCCATCATTGCTGAT...TGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | CAGCGTTATGTCTTGTGCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTAGAAACTGGGTCTGCTaGCGCAGGGCGAGGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: QRYVLCTFCPCSTTHATSRNWVC*RRARTL Trigger: GAGGGTCCTCGCCCTGCGCCAGCAGACCCAGTTTCT...ACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGCACAAGACATAACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | CTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTATTGCTCCCACCTCGCAATGGGTaGGCTTCGGGGAGATACGGG | + |
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Preference number: 4 (lower is better) Translates to: LPVFHHACHQLILLQLLLPPRNG*ASGRYG Trigger: CCCGTATCTCCCCGAAGCTCACCCATTGCGAGGTGG...GAGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | AAGCAGCCTCCCCTCCCCTACTCCACTCTCACCTACAGGATGCTGAGGACAGCCCCTTGGTCCAGTCGATaGCTTCAGAGAAAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQPPLPYSTLTYRMLRTAPWSSR*LQRKAA Trigger: AGCTGCCTTTCTCTGAAGTCATCGACTGGACCAAGG...GGCTGTCCTCAGCATCCTGTAGGTGAGAGTGGAGTAGGGGAGGGGAGGCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | AAGCAGCCTCCCCTCCCCTACTCCACTCTCACCTACAGGATGCTGAGGACAGCCGTCTCTCATCAGCAATaGTGGCTGCCTTGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQPPLPYSTLTYRMLRTAVSHQQ*WLPWSS Trigger: ACTGGACCAAGGCAGCCATCATTGCTGATGAGAGAC...GGCTGTCCTCAGCATCCTGTAGGTGAGAGTGGAGTAGGGGAGGGGAGGCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | GGCATTTCAGGGAACAGGATCAGCCTGTACACCGGCCTGTGCGAAACGTGCCAACACATCAGTGAGGGGTaGCCTGATGCACCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GISGNRISLYTGLCETCQHISEG*PDAPQI Trigger: GATCTGGGGTGCATCAGGTCACCCCTCACTGATGTG...TTGGCACGTTTCGCACAGGCCGGTGTACAGGCTGATCCTGTTCCCTGAAATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | TCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCCGCTCAGGAAAGCTCTaGCACACCACAAAGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHLQDAEDSPLPGDQPICRSGKL*HTTKAK Trigger: CTTTGCCTTTGTGGTGTGGCAGAGCTTTCCTGAGCG...GCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | AGCACCCTGGGAAGCAAAAGTCAGGTGGATCTCTGTGAATTTGAGGCTAGTCTGTGTGCTGCTGCAGCTTaGCGGGAGCCCCACCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: STLGSKSQVDLCEFEASLCAAAA*REPHLA Trigger: TGCGAGGTGGGGCTCCCGGCAAGCTGCAGCAGCACA...CAGACTAGCCTCAAATTCACAGAGATCCACCTGACTTTTGCTTCCCAGGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | CTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTATTGCTCGACCCGAGGGAGCTGTaGGACATCTTCTGGGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVFHHACHQLILLQLLLDPREL*DIFWVR Trigger: ACGAACCCAGAAGATGTCGCACAGCTCCCTCGGGTC...GAGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | GAGGACTTCGAGATCACCAAGGAGGTGAGTGCAGGTCTGACAGACATAGGTCGAAGGAATCCAGGATCCTaGGCTGAGCCTCAGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EDFEITKEVSAGLTDIGRRNPGS*AEPQRS Trigger: CGACCTCTGAGGCTCAGCGCAGGATCCTGGATTCCT...TCGACCTATGTCTGTCAGACCTGCACTCACCTCCTTGGTGATCTCGAAGTCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTATTGCTGGGTCTTGCTCACAGTaGCTGTCCCAGAGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SARVPPRMPPVNTLAAIAGSCSQ*LSQRQA Trigger: AGCCTGCCTCTGGGACAGGCACTGTGAGCAAGACCC...AGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | TCTGGCATACAGTGCGAGTTCCAGGACAGCCAGGACTACCCAGAGAAACCCTTAAGCCCCACCTCGCAATaGGTGAGCTTCGGGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SGIQCEFQDSQDYPEKPLSPTSQ*VSFGEI Trigger: TATCTCCCCGAAGCTCACCCATTGCGAGGTGGGGCT...TAAGGGTTTCTCTGGGTAGTCCTGGCTGTCCTGGAACTCGCACTGTATGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | TGTTCACGCTTGATTGAGTCTGGAAATCCTGGTGTGTGCTTTGTACCGGGACCAGAGGTGGCAGATCGGTaGCCAGGGATGAGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSRLIESGNPGVCFVPGPEVADR*PGMRQK Trigger: CTTCTGCCTCATCCCTGGTCACCGATCTGCCACCTC...TGGTCCCGGTACAAAGCACACACCAGGATTTCCAGACTCAATCAAGCGTGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTATTGCTGGAGAAAGCAGGAGGTaGCAGATCGGTGACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SARVPPRMPPVNTLAAIAGESRR*QIGDQG Trigger: TCCCTGGTCACCGATCTGCCACCTCCTGCTTTCTCC...AGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR CAA 72 bp | ATTGGCCAACCGGGACAGGACTTTGATCCATCTCTGTaGGTTCTCTCGTGTCTAGCAGACAGGTGCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGQPGQDFDPSL*VLSCLADRCSA Trigger: GGCACTGCACCTGTCTGCTAGACACGAGAGAACCAACAGAGATGGATCAAAGTCCTGTCCCGGTTGGCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | GAGGACTTCGAGATCACCAAGGAGGTGAGTGCAGGTCTGACAGACATAGGTCGACCCCAGATCCGGTCCTaGATAATCTCTAGGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EDFEITKEVSAGLTDIGRPQIRS*IISRVV Trigger: TACCACCCTAGAGATTATTCAGGACCGGATCTGGGG...TCGACCTATGTCTGTCAGACCTGCACTCACCTCCTTGGTGATCTCGAAGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | TCTTGTGCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGGCAGAAGGTGGCATTaGGAAGGGTCTCTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCAHSARVPPRMPPVNTLGRRWH*EGSLLG Trigger: ACCCAGGAGAGACCCTTCCCAATGCCACCTTCTGCC...AAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGCACAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | GGCAAGGACACGTGCTTTATTTCGGAAGCGATAATTCCAGTTCCAGGTGGACGAGAACCTGCCACCTCCTaGATGAGCTTCAGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKDTCFISEAIIPVPGGREPATS*MSFSRD Trigger: GTCCCTGCTGAAGCTCATCCAGGAGGTGGCAGGTTC...TCGTCCACCTGGAACTGGAATTATCGCTTCCGAAATAAAGCACGTGTCCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | CCGGGACAGGACTTTGATCCATCTCTGTTGGTTCTCTCGTGTCTAGCAGACAGGCAGAGAATCAGGATCTaGGCACAGTGCCGAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: PGQDFDPSLLVLSCLADRQRIRI*AQCREP Trigger: AGGTTCTCGGCACTGTGCCCAGATCCTGATTCTCTG...CCTGTCTGCTAGACACGAGAGAACCAACAGAGATGGATCAAAGTCCTGTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTATTGCTGCCTCATCCCAGAAGTaGCTTCCAGACAGAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SARVPPRMPPVNTLAAIAASSQK*LPDRKP Trigger: GGGCTTTCTGTCTGGAAGCCACTTCTGGGATGAGGC...AGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | CCGGGACAGGACTTTGATCCATCTCTGTTGGTTCTCTCGTGTCTAGCAGACAGGCCGTGGTCAGGACCATaGAGAACTCATTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PGQDFDPSLLVLSCLADRPWSGP*RTHWSS Trigger: GGATGACCAATGAGTTCTCCATGGTCCTGACCACGG...CCTGTCTGCTAGACACGAGAGAACCAACAGAGATGGATCAAAGTCCTGTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | AGCACCCTGGGAAGCAAAAGTCAGGTGGATCTCTGTGAATTTGAGGCTAGTCTGGAGAAGGCAAGCGTCTaGTGGGCTGAGTGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: STLGSKSQVDLCEFEASLEKASV*WAECRV Trigger: TACTCTGCACTCAGCCCAGCAGACGCTTGCCTTCTC...CAGACTAGCCTCAAATTCACAGAGATCCACCTGACTTTTGCTTCCCAGGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | TCTGGCATACAGTGCGAGTTCCAGGACAGCCAGGACTACCCAGAGAAACCCTTAAGTGCACAAAGATCTTaGGGACCTTTCCCCTACACT | + |
|
Preference number: 4 (lower is better) Translates to: SGIQCEFQDSQDYPEKPLSAQRS*GPFPYT Trigger: AGTGTAGGGGAAAGGTCCTCAAGATCTTTGTGCACT...TAAGGGTTTCTCTGGGTAGTCCTGGCTGTCCTGGAACTCGCACTGTATGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | GCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTGTAGAAAGAGTGCTCTaGGCATCAAGGCTGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: AHSARVPPRMPPVNTLAAVERVL*ASRLRI Trigger: TATCCTCAGCCTTGATGCTCAGAGCACTCTTTCTAC...AGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | TCTTGTGCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTCGATACTTCTTGCGTTaGACCGATACCGGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCAHSARVPPRMPPVNTLRYFLR*TDTGSL Trigger: CAAGGACCCGGTATCGGTGCAACGCAAGAAGTATCG...AAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGCACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | TGTTCACGCTTGATTGAGTCTGGAAATCCTGGTGTGTGCTTTGTACCGGGACCACTCTACGATCCTGGCTaGGGAGAAAAAGGAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSRLIESGNPGVCFVPGPLYDPG*GEKGEG Trigger: GCCTTCTCCTTTTTCTCCCCAGCCAGGATCGTAGAG...TGGTCCCGGTACAAAGCACACACCAGGATTTCCAGACTCAATCAAGCGTGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | ACTCTTGCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATAAGGTGGCCCCAGGTTaGGGACTGTGCTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLAAIAQIFTVHLPDQRDKVAPG*GLCCCS Trigger: GCTGCAGCAGCACAGTCCCCAACCTGGGGCCACCTT...ATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR TCA 90 bp | GCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGAGCGGATCCAGACGCACTTaGGAGGAAACCAGAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AAIAQIFTVHLPDQRDESGSRRT*EETRGM Trigger: CATGCCTCTGGTTTCCTCTCAAGTGCGTCTGGATCC...GCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | TTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGAGCAGGACTCACAGTGCCGAGAACCTaGCACCTCCTGGATGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKYLQCTCQTKEMRAGLTVPRT*HLLDEL Trigger: AAGCTCATCCAGGAGGTGGCAGGTTCTCGGCACTGT...GAGTCCTGCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | TTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGAGCAGGACTCGGTAGAAGGCAGCCGTaGTCAGGACCATGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLKYLQCTCQTKEMRAGLGRRQP*SGPWRT Trigger: AGTTCTCCATGGTCCTGACCACGGCTGCCTTCTACC...GAGTCCTGCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | ATTTTATCCGTAGTCTTTAACTCCATTCAGTCAGGCATTGTGGCTCACACCTGTAGGGCAGCCAGGACCTaGAGTGGGAGTCTCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ILSVVFNSIQSGIVAHTCRAART*SGSLSS Trigger: TGATGAGAGACTCCCACTGCAGGTCCTGGCTGCCCT...ACAGGTGTGAGCCACAATGCCTGACTGAATGGAGTTAAAGACTACGGATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | GCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGAGCGCTCCTCTACGATCCTaGCTGGGGAGAAAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAIAQIFTVHLPDQRDESAPLRS*LGRKRR Trigger: TCTCCTTTTTCTCCCCAGCCAGGATCGTAGAGGAGC...GCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CCA 90 bp | GCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGAGCGAAACCAGAGGCATGTaGCCGAACCCTGCTGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AAIAQIFTVHLPDQRDESETRGM*PNPAAK Trigger: TTTAGCAGCAGGGTTCGGCCACATGCCTCTGGTTTC...GCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR CAA 72 bp | CCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTaGCAGCTATTGCTCAAATATTTACAGTGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVFHHACHQLIL*QLLLKYLQCTC Trigger: GCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR GCA 90 bp | GCAGCTATTGCTCAAATATTTACAGTGCACCTGCCAGACCAAAGAGATGAGAGCATGGCTTCTCTAGACTaGGATACTTCTTGCGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAIAQIFTVHLPDQRDESMASLD*DTSCVA Trigger: TGCAACGCAAGAAGTATCGCAGTCTAGAGAAGCCAT...GCTCTCATCTCTTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| 3UTR CAA 72 bp | CACCACGCATGCCACCAGTTAATACTCTTGCAGCTATaGCTCAAATATTTACAGTGCACCTGCCAGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHACHQLILLQL*LKYLQCTCQTK Trigger: TTTGGTCTGGCAGGTGCACTGTAAATATTTGAGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | TGCGAAACGTGCCAAACGCAACCCCACTGCAGCTGGAGAAGGCCCCGGCCCTCACCAGCGGGGCCAGCCTaGGGAGCGCCCTGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CETCQTQPHCSWRRPRPSPAGPA*GAPWKR Trigger: CCTCTTCCAGGGCGCTCCCAAGGCTGGCCCCGCTGG...TGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTTCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 90 bp | CCGAGGAGGGGCTGGCCTCAGCTACCATCGCCTGTCCCAGCCTGGTaGAAGGGGCTGGGTAGAGACTCAACACCAGATGGTTCCGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRGWPQLPSPVPAW*KGLGRDSTPDGSGL Trigger: GAGGCCGGAACCATCTGGTGTTGAGTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCCAGCCCCTCCTCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | GGAGCGCTAAATCGAAGCCCGGTCGGAAGATGTCCGAGGAGGGGCTaGCCTCAGCTACCATCGCCTGTCCCAGCCTGGTGCAAGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GALNRSPVGRCPRRG*PQLPSPVPAWCKGL Trigger: CAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCCAGCCCCTCCTCGGACATCTTCCGACCGGGCTTCGATTTAGCGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | GAGAAACTCTGTAAGAAGGCAGCATCCAGCCAGCGGGGCCAGCCTTaGGAGCGCCCTGGAAGAGGACCGGGCAACACTGCCAGGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKLCKKAASSQRGQP*ERPGRGPGNTARRR Trigger: CCTTCGCCTGGCAGTGTTGCCCGGTCCTCTTCCAGGGCGCTCCCAAGGCTGGCCCCGCTGGCTGGATGCTGCCTTCTTACAGAGTTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | TGTCCGAGGAGGGGCTGGCCTCAGCTACCATCGCCTGTCCCAGCCTaGTGCAAGGGGCTGGGTAGAGACTCAACACCAGATGGTTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: CPRRGWPQLPSPVPA*CKGLGRDSTPDGSG Trigger: GCCGGAACCATCTGGTGTTGAGTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCCAGCCCCTCCTCGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | GTTGATGCAGTCCTGATCCAGGGGCTGAGGCTCCGGCACTGGTCGTaGATCCCCAGAATCCATTGGCACAGCCTCCGGGTGCTGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VDAVLIQGLRLRHWS*IPRIHWHSLRVLPP Trigger: GGGAGGCAGCACCCGGAGGCTGTGCCAATGGATTCTGGGGATCCACGACCAGTGCCGGAGCCTCAGCCCCTGGATCAGGACTGCATCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 90 bp | CTGGGGTCCAGGGTCTTGCTCACAGTGCCTGTCCCAGAGGCAGGCTaGGGCGTGGGTGCTTGTGATACGCCACCTGCCTTTCTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSRVLLTVPVPEAG*GVGACDTPPAFLLC Trigger: GCAGAGGAGAAAGGCAGGTGGCGTATCACAAGCACCCACGCCTCAGCCTGCCTCTGGGACAGGCACTGTGAGCAAGACCCTGGACCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
||
| CDS CCA 90 bp | CCAGGGTCTTGCTCACAGTGCCTGTCCCAGAGGCAGGCTGAGGCGTaGGTGCTTGTGATACGCCACCTGCCTTTCTCCTCTGCTACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSCSQCLSQRQAEA*VLVIRHLPFSSATA Trigger: GGCGGTAGCAGAGGAGAAAGGCAGGTGGCGTATCACAAGCACCCACGCCTCAGCCTGCCTCTGGGACAGGCACTGTGAGCAAGACCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
||
| CDS CCA 90 bp | CAGGGGCTGAGGCTCCGGCACTGGTCGTGGATCCCCAGAATCCATTaGCACAGCCTCCGGGTGCTGCCTCCCATAAGGCACCTTGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGLRLRHWSWIPRIH*HSLRVLPPIRHLDR Trigger: CCTATCAAGGTGCCTTATGGGAGGCAGCACCCGGAGGCTGTGCCAATGGATTCTGGGGATCCACGACCAGTGCCGGAGCCTCAGCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
||
| CDS TCA 90 bp | GCTCACAGTGCCTGTCCCAGAGGCAGGCTGAGGCGTGGGTGCTTGTaGTACGCCACCTGCCTTTCTCCTCTGCTACCGCCAGTAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AHSACPRGRLRRGCL*YATCLSPLLPPVRW Trigger: CCACCTTACTGGCGGTAGCAGAGGAGAAAGGCAGGTGGCGTATCACAAGCACCCACGCCTCAGCCTGCCTCTGGGACAGGCACTGTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
||
| CDS CCA 90 bp | GCTGGCCTCAGCTACCATCGCCTGTCCCAGCCTGGTGCAAGGGGCTaGGTAGAGACTCAACACCAGATGGTTCCGGCCTCCGTTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLSYHRLSQPGARG*VETQHQMVPASVPV Trigger: AACTGGAACGGAGGCCGGAACCATCTGGTGTTGAGTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
||
| CDS-3UTR CAA 90 bp | TCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCCTGGGGTCCAGGGTCTaGCTCACAGTGCCTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLQDAEDSPLPGDQPICLGSRV*LTVPVP Trigger: TGGGACAGGCACTGTGAGCAAGACCCTGGACCCCAG...GCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
||
| CDS TCA 90 bp | GAATCAGGATCTGGGCACAGTGCCGAGAACCTGCCACCTCCTGGATaGGCTTCAGCAGGGACTCTCCAGAGGCTCCCACCCAGATCACGG | + |
|
Preference number: 5 (lower is better) Translates to: ESGSGHSAENLPPPG*ASAGTLQRLPPRSR Trigger: CCGTGATCTGGGTGGGAGCCTCTGGAGAGTCCCTGCTGAAGCTCATCCAGGAGGTGGCAGGTTCTCGGCACTGTGCCCAGATCCTGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 90 bp | GAGAGGAAACCAGAGGCATGTGGCCGAACCCTGCTGCTAAACGGTTaGTGCAGTCCTGATCCAGGGGCTGAGGCTCCGGCACTGGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERKPEACGRTLLLNG*CSPDPGAEAPALVV Trigger: CACGACCAGTGCCGGAGCCTCAGCCCCTGGATCAGGACTGCATCAACCGTTTAGCAGCAGGGTTCGGCCACATGCCTCTGGTTTCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | ACCTGTGGTAGAAGGCAGCCGTGGTCAGGACCATGGAGAACTCATTaGTCATCCCAGTACGGTAGCCCCAGCCACCCTGGGCCTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TCGRRQPWSGPWRTH*SSQYGSPSHPGPHP Trigger: GGGATGAGGCCCAGGGTGGCTGGGGCTACCGTACTGGGATGACCAATGAGTTCTCCATGGTCCTGACCACGGCTGCCTTCTACCACAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | TCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCAGGCAGAAGGTGGCATaGGGAAGGGTCTCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHLQDAEDSPLPGDQPICRQKVA*GRVSPG Trigger: CCCAGGAGAGACCCTTCCCAATGCCACCTTCTGCCT...GCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 90 bp | GCTGAGCCTCAGAGGTCGGACCAGCCGGGGAGTGCACAAAGATCTTaGGGACCTTTCCCCTACACTTGGAGGTGTCAAAGCAGGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AEPQRSDQPGSAQRS*GPFPYTWRCQSRLP Trigger: GGGGAGCCTGCTTTGACACCTCCAAGTGTAGGGGAAAGGTCCTCAAGATCTTTGTGCACTCCCCGGCTGGTCCGACCTCTGAGGCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 90 bp | GCTTCAGCAGGGACTCTCCAGAGGCTCCCACCCAGATCACGGCGCTaGAACTGCTCCCAGGGCCAGAGCCCAGTTGCAGATGATAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASAGTLQRLPPRSRR*NCSQGQSPVADDKR Trigger: CCTTTTATCATCTGCAACTGGGCTCTGGCCCTGGGAGCAGTTTCAGCGCCGTGATCTGGGTGGGAGCCTCTGGAGAGTCCCTGCTGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | GAGACCCGAGGGAGCTGTGCGACATCTTCTGGGTTCGTCTCAGACTaGGAGAAACTCTGTAAGAAGGCAGCATCCAGCCAGCGGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ETRGSCATSSGFVSD*EKLCKKAASSQRGQ Trigger: CTGGCCCCGCTGGCTGGATGCTGCCTTCTTACAGAGTTTCTCCCAGTCTGAGACGAACCCAGAAGATGTCGCACAGCTCCCTCGGGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | CAGAGAATCAGGATCTGGGCACAGTGCCGAGAACCTGCCACCTCCTaGATGAGCTTCAGCAGGGACTCTCCAGAGGCTCCCACCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: QRIRIWAQCREPATS*MSFSRDSPEAPTQI Trigger: GATCTGGGTGGGAGCCTCTGGAGAGTCCCTGCTGAAGCTCATCCAGGAGGTGGCAGGTTCTCGGCACTGTGCCCAGATCCTGATTCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | CAGCGTTATGTCTTGTGCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTGCCGGCCTGAAGGGCTaGGAGAAAGCAGGAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRYVLCTFCPCSTTHATSAGLKG*EKAGGG Trigger: GCCACCTCCTGCTTTCTCCAAGCCCTTCAGGCCGGC...ACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGCACAAGACATAACGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | TGCGAAACGTGCCAAACGCAACCCCACTGCAGCTGGAGAAGGCCCCGGCCCTCAAGGGCCAGAGCCCAGTaGCAGATGATAAAAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CETCQTQPHCSWRRPRPSRARAQ*QMIKGE Trigger: TTCCCCTTTTATCATCTGCAACTGGGCTCTGGCCCT...TGAGGGCCGGGGCCTTCTCCAGCTGCAGTGGGGTTGCGTTTGGCACGTTTCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 90 bp | CTCACTGTTCCAGAGAATCAGGATCTGGGCACAGTGCCGAGAACCTaGCACCTCCTGGATGAGCTTCAGCAGGGACTCTCCAGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTVPENQDLGTVPRT*HLLDELQQGLSRGS Trigger: GGAGCCTCTGGAGAGTCCCTGCTGAAGCTCATCCAGGAGGTGGCAGGTTCTCGGCACTGTGCCCAGATCCTGATTCTCTGGAACAGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | CACCTGTCAGGGGGCAGCTTCTCACTGTTCCAGAGAATCAGGATCTaGGCACAGTGCCGAGAACCTGCCACCTCCTGGATGAGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSGGSFSLFQRIRI*AQCREPATSWMSFS Trigger: GCTGAAGCTCATCCAGGAGGTGGCAGGTTCTCGGCACTGTGCCCAGATCCTGATTCTCTGGAACAGTGAGAAGCTGCCCCCTGACAGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | GGGTGTGGTAGTACCTGTGGTAGAAGGCAGCCGTGGTCAGGACCATaGAGAACTCATTGGTCATCCCAGTACGGTAGCCCCAGCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCGSTCGRRQPWSGP*RTHWSSQYGSPSHP Trigger: AGGGTGGCTGGGGCTACCGTACTGGGATGACCAATGAGTTCTCCATGGTCCTGACCACGGCTGCCTTCTACCACAGGTACTACCACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | TCTTGTGCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTCTGTGCTGCTGCAGCTaGCCGGGAGCCCCACCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SCAHSARVPPRMPPVNTLLCCCS*PGAPPR Trigger: GCGAGGTGGGGCTCCCGGCAAGCTGCAGCAGCACAG...AAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGCACAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 90 bp | TGCACCGATACCGGGTCCTTGAACAACACCGGATCCAGACGCACTTaGGAGGAAACCAGAGGCATGTGGCCGAACCCTGCTGCTAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: CTDTGSLNNTGSRRT*EETRGMWPNPAAKR Trigger: CCGTTTAGCAGCAGGGTTCGGCCACATGCCTCTGGTTTCCTCTCAAGTGCGTCTGGATCCGGTGTTGTTCAAGGACCCGGTATCGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 90 bp | TCCTCTACGATCCTGGCTGGGGAGAAAAAGGAGAAGGCAAGCGTCTaGTGGGCTGAGTGCAGAGTAGCGGGAGCCTTCCAAGGAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSTILAGEKKEKASV*WAECRVAGAFQGIQ Trigger: CTGGATTCCTTGGAAGGCTCCCGCTACTCTGCACTCAGCCCAGCAGACGCTTGCCTTCTCCTTTTTCTCCCCAGCCAGGATCGTAGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | TCTCACCTACAGGATGCTGAGGACAGCCCTCTTCCTGGCGACCAGCCCATCTGCGCAATGATGGCTGCCTaGGTCCAGTCGATGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLQDAEDSPLPGDQPICAMMAA*VQSMTS Trigger: TGAAGTCATCGACTGGACCAAGGCAGCCATCATTGC...GCAGATGGGCTGGTCGCCAGGAAGAGGGCTGTCCTCAGCATCCTGTAGGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | TTGAGGCTAGTCTGGCATACAGTGCGAGTTCCAGGACAGCCAGGACTACCCAGAGATCCCCAGAATCCATaGGCACAGCCTCCGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRLVWHTVRVPGQPGLPRDPQNP*AQPPGA Trigger: AGCACCCGGAGGCTGTGCCAATGGATTCTGGGGATC...TCTGGGTAGTCCTGGCTGTCCTGGAACTCGCACTGTATGCCAGACTAGCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 90 bp | TCTACGATCCTGGCTGGGGAGAAAAAGGAGAAGGCAAGCGTCTGCTaGGCTGAGTGCAGAGTAGCGGGAGCCTTCCAAGGAATCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: STILAGEKKEKASVC*AECRVAGAFQGIQD Trigger: ATCCTGGATTCCTTGGAAGGCTCCCGCTACTCTGCACTCAGCCCAGCAGACGCTTGCCTTCTCCTTTTTCTCCCCAGCCAGGATCGTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | CCGGGACAGGACTTTGATCCATCTCTGTTGGTTCTCTCGTGTCTAGCAGACAGGTTGATAGGGGGCAGTTaGGTGACGGTGGCTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQDFDPSLLVLSCLADRLIGGS*VTVATR Trigger: CCTGGTAGCCACCGTCACCAAACTGCCCCCTATCAA...CCTGTCTGCTAGACACGAGAGAACCAACAGAGATGGATCAAAGTCCTGTCCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | CCGGGACAGGACTTTGATCCATCTCTGTTGGTTCTCTCGTGTCTAGCAGACAGGGCGATACTTCTTGCGTaGCACCGATACCGGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGQDFDPSLLVLSCLADRAILLA*HRYRVL Trigger: AAGGACCCGGTATCGGTGCAACGCAAGAAGTATCGC...CCTGTCTGCTAGACACGAGAGAACCAACAGAGATGGATCAAAGTCCTGTCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 90 bp | TCTCTAGACTGCGATACTTCTTGCGTTGCACCGATACCGGGTCCTTaGACAACACCGGATCCAGACGCACTTGAGAGGAAACCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLDCDTSCVAPIPGP*TTPDPDALERKPEA Trigger: TGCCTCTGGTTTCCTCTCAAGTGCGTCTGGATCCGGTGTTGTTCAAGGACCCGGTATCGGTGCAACGCAAGAAGTATCGCAGTCTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 90 bp | AAGTGGCTTCCAGACAGAAAGCCCACCATCCGCTCAGGAAAGCTCTaGCACACCACAAAGGCAAAGTCCACCTCACTGGTAGAAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KWLPDRKPTIRSGKL*HTTKAKSTSLVERV Trigger: CACTCTTTCTACCAGTGAGGTGGACTTTGCCTTTGTGGTGTGGCAGAGCTTTCCTGAGCGGATGGTGGGCTTTCTGTCTGGAAGCCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | GCACATTCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTACCTTTCCCCTACACTaGGAGGTGTCAAAGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHSARVPPRMPPVNTLAATFPLH*EVSKQA Trigger: AGCCTGCTTTGACACCTCCAAGTGTAGGGGAAAGGT...AGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGAATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS-3UTR CAA 90 bp | TCTGCCCGTGTTCCACCACGCATGCCACCAGTTAATACTCTTGCAGCTATTGCTACCTTCCTGTGCCCCTaGATGACTGTTAGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SARVPPRMPPVNTLAAIATFLCP*MTVRGT Trigger: AGTGCCCCTAACAGTCATCAAGGGGCACAGGAAGGT...AGCAATAGCTGCAAGAGTATTAACTGGTGGCATGCGTGGTGGAACACGGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 90 bp | CACACCACAAAGGCAAAGTCCACCTCACTGGTAGAAAGAGTGCTCTaGGCATCAAGGCTGAGGATAACATTGGTGCTGATGTTGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HTTKAKSTSLVERVL*ASRLRITLVLMLLY Trigger: GTACAGCAACATCAGCACCAATGTTATCCTCAGCCTTGATGCTCAGAGCACTCTTTCTACCAGTGAGGTGGACTTTGCCTTTGTGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CAA 90 bp | CCAGCGGGGGCTGAGGAGCACGGGGATGCAGCCGGCCTGAAGGGCTaGGAGAAAGCAGGAGGTGGCAGATCGGTGACCAGGGATGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGAEEHGDAAGLKG*EKAGGGRSVTRDEA Trigger: TGCCTCATCCCTGGTCACCGATCTGCCACCTCCTGCTTTCTCCAAGCCCTTCAGGCCGGCTGCATCCCCGTGCTCCTCAGCCCCCGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | GAGGCAGGGGCCCGCAGGCTCCTCTACGATCCTGGCTaGGGAGAAAAAGGAGAAGGCAAGCGTCTGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EAGARRLLYDPG*GEKGEGKRLLG Trigger: GCCCAGCAGACGCTTGCCTTCTCCTTTTTCTCCCCAGCCAGGATCGTAGAGGAGCCTGCGGGCCCCTGCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | AATCGAAGCCCGGTCGGAAGATGTCCGAGGAGGGGCTaGCCTCAGCTACCATCGCCTGTCCCAGCCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: NRSPVGRCPRRG*PQLPSPVPAWC Trigger: GCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCCAGCCCCTCCTCGGACATCTTCCGACCGGGCTTCGATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | GTCCTGATCCAGGGGCTGAGGCTCCGGCACTGGTCGTaGATCCCCAGAATCCATTGGCACAGCCTCCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLIQGLRLRHWS*IPRIHWHSLRV Trigger: CACCCGGAGGCTGTGCCAATGGATTCTGGGGATCCACGACCAGTGCCGGAGCCTCAGCCCCTGGATCAGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | GCCTGTCCCAGAGGCAGGCTGAGGCGTGGGTGCTTGTaGTACGCCACCTGCCTTTCTCCTCTGCTACCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ACPRGRLRRGCL*YATCLSPLLPP Trigger: TGGCGGTAGCAGAGGAGAAAGGCAGGTGGCGTATCACAAGCACCCACGCCTCAGCCTGCCTCTGGGACAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | GGGACTCTCCAGAGGCTCCCACCCAGATCACGGCGCTaGAACTGCTCCCAGGGCCAGAGCCCAGTTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GTLQRLPPRSRR*NCSQGQSPVAD Trigger: ATCTGCAACTGGGCTCTGGCCCTGGGAGCAGTTTCAGCGCCGTGATCTGGGTGGGAGCCTCTGGAGAGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | GCCACCTGCCTTTCTCCTCTGCTACCGCCAGTAAGGTaGCCCCAGGTTGGGGACTGTGCTGCTGCAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ATCLSPLLPPVR*PQVGDCAAAAC Trigger: GCAAGCTGCAGCAGCACAGTCCCCAACCTGGGGCCACCTTACTGGCGGTAGCAGAGGAGAAAGGCAGGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | AGGCTCCGGCACTGGTCGTGGATCCCCAGAATCCATTaGCACAGCCTCCGGGTGCTGCCTCCCATAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLRHWSWIPRIH*HSLRVLPPIRH Trigger: GTGCCTTATGGGAGGCAGCACCCGGAGGCTGTGCCAATGGATTCTGGGGATCCACGACCAGTGCCGGAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CAA 72 bp | GAGGCTCCGGCACTGGTCGTGGATCCCCAGAATCCATaGGCACAGCCTCCGGGTGCTGCCTCCCATAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EAPALVVDPQNP*AQPPGAASHKA Trigger: TGCCTTATGGGAGGCAGCACCCGGAGGCTGTGCCAATGGATTCTGGGGATCCACGACCAGTGCCGGAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | TGCTGCAGCTTGCCGGGAGCCCCACCTCGCAATGGGTaGGCTTCGGGGAGATACGGGAGCGCTAAATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CCSLPGAPPRNG*ASGRYGSAKSK Trigger: CTTCGATTTAGCGCTCCCGTATCTCCCCGAAGCTCACCCATTGCGAGGTGGGGCTCCCGGCAAGCTGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | CCAGAGGCATGTGGCCGAACCCTGCTGCTAAACGGTTaGTGCAGTCCTGATCCAGGGGCTGAGGCTCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PEACGRTLLLNG*CSPDPGAEAPA Trigger: TGCCGGAGCCTCAGCCCCTGGATCAGGACTGCATCAACCGTTTAGCAGCAGGGTTCGGCCACATGCCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 72 bp | ACTTGGAGGTGTCAAAGCAGGCTCCCCAGGTGCAGCTaGTTCCCCGAGAGACCCGAGGGAGCTGTGCGACAT | + |
|
Preference number: 6 (lower is better) Translates to: TWRCQSRLPRCS*FPERPEGAVRH Trigger: ATGTCGCACAGCTCCCTCGGGTCTCTCGGGGAAGCAGCTGCACCTGGGGAGCCTGCTTTGACACCTCCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 72 bp | GGCTGGCCTCAGCTACCATCGCCTGTCCCAGCCTGGTaGAAGGGGCTGGGTAGAGACTCAACACCAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GWPQLPSPVPAW*KGLGRDSTPDG Trigger: ACCATCTGGTGTTGAGTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | AGCTACCATCGCCTGTCCCAGCCTGGTGCAAGGGGCTaGGTAGAGACTCAACACCAGATGGTTCCGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SYHRLSQPGARG*VETQHQMVPAS Trigger: GGAGGCCGGAACCATCTGGTGTTGAGTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | AGGGGCTGGCCTCAGCTACCATCGCCTGTCCCAGCCTaGTGCAAGGGGCTGGGTAGAGACTCAACACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RGWPQLPSPVPA*CKGLGRDSTPD Trigger: ATCTGGTGTTGAGTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCCAGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | AGGATCTGGGCACAGTGCCGAGAACCTGCCACCTCCTaGATGAGCTTCAGCAGGGACTCTCCAGAGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RIWAQCREPATS*MSFSRDSPEAP Trigger: GGGAGCCTCTGGAGAGTCCCTGCTGAAGCTCATCCAGGAGGTGGCAGGTTCTCGGCACTGTGCCCAGATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 72 bp | GGTGCAGCTGCTTCCCCGAGAGACCCGAGGGAGCTGTaGGACATCTTCTGGGTTCGTCTCAGACTGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GAAASPRDPREL*DIFWVRLRLGE Trigger: TTCTCCCAGTCTGAGACGAACCCAGAAGATGTCGCACAGCTCCCTCGGGTCTCTCGGGGAAGCAGCTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | TGCTCACAGTGCCTGTCCCAGAGGCAGGCTGAGGCGTaGGTGCTTGTGATACGCCACCTGCCTTTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSQCLSQRQAEA*VLVIRHLPFSS Trigger: AGAGGAGAAAGGCAGGTGGCGTATCACAAGCACCCACGCCTCAGCCTGCCTCTGGGACAGGCACTGTGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | AGAAGGCAGCCGTGGTCAGGACCATGGAGAACTCATTaGTCATCCCAGTACGGTAGCCCCAGCCACCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRQPWSGPWRTH*SSQYGSPSHPG Trigger: CCCAGGGTGGCTGGGGCTACCGTACTGGGATGACCAATGAGTTCTCCATGGTCCTGACCACGGCTGCCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 72 bp | CCAGAGAATCAGGATCTGGGCACAGTGCCGAGAACCTaGCACCTCCTGGATGAGCTTCAGCAGGGACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PENQDLGTVPRT*HLLDELQQGLS Trigger: GGAGAGTCCCTGCTGAAGCTCATCCAGGAGGTGGCAGGTTCTCGGCACTGTGCCCAGATCCTGATTCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | CTGGCTGGGGAGAAAAAGGAGAAGGCAAGCGTCTGCTaGGCTGAGTGCAGAGTAGCGGGAGCCTTCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LAGEKKEKASVC*AECRVAGAFQG Trigger: TCCTTGGAAGGCTCCCGCTACTCTGCACTCAGCCCAGCAGACGCTTGCCTTCTCCTTTTTCTCCCCAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | GGGGGCAGCTTCTCACTGTTCCAGAGAATCAGGATCTaGGCACAGTGCCGAGAACCTGCCACCTCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GGSFSLFQRIRI*AQCREPATSWM Trigger: CATCCAGGAGGTGGCAGGTTCTCGGCACTGTGCCCAGATCCTGATTCTCTGGAACAGTGAGAAGCTGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | ACCGGGTCCTTGAACAACACCGGATCCAGACGCACTTaGGAGGAAACCAGAGGCATGTGGCCGAACCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGSLNNTGSRRT*EETRGMWPNPA Trigger: AGCAGGGTTCGGCCACATGCCTCTGGTTTCCTCTCAAGTGCGTCTGGATCCGGTGTTGTTCAAGGACCCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 72 bp | ATCCTGGCTGGGGAGAAAAAGGAGAAGGCAAGCGTCTaGTGGGCTGAGTGCAGAGTAGCGGGAGCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ILAGEKKEKASV*WAECRVAGAFQ Trigger: TTGGAAGGCTCCCGCTACTCTGCACTCAGCCCAGCAGACGCTTGCCTTCTCCTTTTTCTCCCCAGCCAGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | CAGAGGTCGGACCAGCCGGGGAGTGCACAAAGATCTTaGGGACCTTTCCCCTACACTTGGAGGTGTCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: QRSDQPGSAQRS*GPFPYTWRCQS Trigger: GCTTTGACACCTCCAAGTGTAGGGGAAAGGTCCTCAAGATCTTTGTGCACTCCCCGGCTGGTCCGACCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | TGGGGAGAAAAAGGAGAAGGCAAGCGTCTGCTGGGCTaGGTGCAGAGTAGCGGGAGCCTTCCAAGGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: WGEKGEGKRLLG*VQSSGSLPRNP Trigger: TGGATTCCTTGGAAGGCTCCCGCTACTCTGCACTCAGCCCAGCAGACGCTTGCCTTCTCCTTTTTCTCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CAA 72 bp | CACGGCGCTGAAACTGCTCCCAGGGCCAGAGCCCAGTaGCAGATGATAAAAGGGGAAGTCTTGAAGGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: HGAETAPRARAQ*QMIKGEVLKAR Trigger: ACGAGCCTTCAAGACTTCCCCTTTTATCATCTGCAACTGGGCTCTGGCCCTGGGAGCAGTTTCAGCGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 72 bp | GAGAAAAAGGAGAAGGCAAGCGTCTGCTGGGCTGAGTaGAGAGTAGCGGGAGCCTTCCAAGGAATCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: EKKEKASVCWAE*RVAGAFQGIQD Trigger: ATCCTGGATTCCTTGGAAGGCTCCCGCTACTCTGCACTCAGCCCAGCAGACGCTTGCCTTCTCCTTTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS GCA 72 bp | CCAGACAGAAAGCCCACCATCCGCTCAGGAAAGCTCTaGCACACCACAAAGGCAAAGTCCACCTCACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: PDRKPTIRSGKL*HTTKAKSTSLV Trigger: TACCAGTGAGGTGGACTTTGCCTTTGTGGTGTGGCAGAGCTTTCCTGAGCGGATGGTGGGCTTTCTGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CCA 72 bp | GGGAGCTGTGCGACATCTTCTGGGTTCGTCTCAGACTaGGAGAAACTCTGTAAGAAGGCAGCATCCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSCATSSGFVSD*EKLCKKAASSQ Trigger: CTGGCTGGATGCTGCCTTCTTACAGAGTTTCTCCCAGTCTGAGACGAACCCAGAAGATGTCGCACAGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CAA 72 bp | GAGTGCACAAAGATCTTGAGGACCTTTCCCCTACACTaGGAGGTGTCAAAGCAGGCTCCCCAGGTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ECTKILRTFPLH*EVSKQAPQVQL Trigger: CAGCTGCACCTGGGGAGCCTGCTTTGACACCTCCAAGTGTAGGGGAAAGGTCCTCAAGATCTTTGTGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS CAA 72 bp | TCAGAGGTCGGACCAGCCGGGGAGTGCACAAAGATCTaGAGGACCTTTCCCCTACACTTGGAGGTGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SEVGPAGECTKI*RTFPLHLEVSK Trigger: CTTTGACACCTCCAAGTGTAGGGGAAAGGTCCTCAAGATCTTTGTGCACTCCCCGGCTGGTCCGACCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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| CDS TCA 72 bp | TGCGATACTTCTTGCGTTGCACCGATACCGGGTCCTTaGACAACACCGGATCCAGACGCACTTGAGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CDTSCVAPIPGP*TTPDPDALERK Trigger: TTTCCTCTCAAGTGCGTCTGGATCCGGTGTTGTTCAAGGACCCGGTATCGGTGCAACGCAAGAAGTATCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030643.3 |
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