Pregenerated sensors for EXT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027198Ensembl transcript IDs: ENSMUST00000028623.13, ENSMUST00000111248.8, ENSMUST00000125407.8, ENSMUST00000132429.2, ENSMUST00000144780.2, ENSMUST00000145838.8, ENSMUST00000184931.8
Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGTCGTAGGTGAGGACGATGGCAGTGAAGCCTTGGGACTGAGGTaGGATCAGCGGCAGGAAGAGCGGGTTGCTCACACTAGCCCACTT | + |
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Preference number: 1 (lower is better) Translates to: AVVGEDDGSEALGLR*DQRQEERVAHTSPL Trigger: AAGTGGGCTAGTGTGAGCAACCCGCTCTTCCTGCCGCTGATCCCACCTCAGTCCCAAGGCTTCACTGCCATCGTCCTCACCTACGACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR CCA 90 bp | GCCAGTGAGATGGTGAACTGCACCAGCAAGCCGAGAGTGATGCGCTaGGCTCCAAGTTGCAGCCTGTCCCTGAGGCTTCCTTCCTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: ASEMVNCTSKPRVMR*APSCSLSLRLPSFG Trigger: GCCAAAGGAAGGAAGCCTCAGGGACAGGCTGCAACTTGGAGCCCAGCGCATCACTCTCGGCTTGCTGGTGCAGTTCACCATCTCACTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR CCA 90 bp | GTTCCAACAGGCAGCCTTTCGCCTTCTCTTGCTAAGGCTCAGGGCTaGGGCAGCACCCATCCTGGAGATGCCGGTTCATTCCCAGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: VPTGSLSPSLAKAQG*GSTHPGDAGSFPVP Trigger: GGGAACTGGGAATGAACCGGCATCTCCAGGATGGGTGCTGCCCCAGCCCTGAGCCTTAGCAAGAGAAGGCGAAAGGCTGCCTGTTGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144780.2 |
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| 3UTR CCA 90 bp | ATACTTCCACTTGTTCATCTCGTGGTCCCAGAGATGCAGGCGGCCTaGGTAGCCCACCAGGCGGTCGGGAAATTCCCGCCAGACCTCATA | + |
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Preference number: 1 (lower is better) Translates to: ILPLVHLVVPEMQAA*VAHQAVGKFPPDLI Trigger: TATGAGGTCTGGCGGGAATTTCCCGACCGCCTGGTGGGCTACCCAGGCCGCCTGCATCTCTGGGACCACGAGATGAACAAGTGGAAGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR GCA 90 bp | GTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTaGGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: VLGSVAHGRFALSRV*ACEMTARLCCDSWD Trigger: ATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR TCA 90 bp | ACTCGGATTTTGGGCCACAGAGATTCTTCCGGAGGGTTTTTATTCTaGTTATTCCAGACCACCAGCAGCTTGGACAGACTGGGCACCTTG | + |
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Preference number: 1 (lower is better) Translates to: TRILGHRDSSGGFLF*LFQTTSSLDRLGTL Trigger: CAAGGTGCCCAGTCTGTCCAAGCTGCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCCGGAAGAATCTCTGTGGCCCAAAATCCGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR GCA 90 bp | TGTTCTTGCAGTCATGAGGGCGATGAAATACAGCCTCTCACAACTTaGAGCCGAACCTTAGTTCCAACAGGCAGCCTTTCGCCTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: CSCSHEGDEIQPLTT*SRTLVPTGSLSPSL Trigger: AAGAGAAGGCGAAAGGCTGCCTGTTGGAACTAAGGTTCGGCTGCAAGTTGTGAGAGGCTGTATTTCATCGCCCTCATGACTGCAAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144780.2 |
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| 3UTR GCA 90 bp | CCACTTCACAGCAGGAGGGTCATTCCACTCTTCATAGGAGATGGCTaGATATGGATAGATCCTGTCATTGATGATTTCCAAATCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: PLHSRRVIPLFIGDG*IWIDPVIDDFQIPL Trigger: CAGTGGGATTTGGAAATCATCAATGACAGGATCTATCCATATGCAGCCATCTCCTATGAAGAGTGGAATGACCCTCCTGCTGTGAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR CCA 90 bp | CACAGCAGGAGGGTCATTCCACTCTTCATAGGAGATGGCTGCATATaGATAGATCCTGTCATTGATGATTTCCAAATCCCACTGTTATAC | + |
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Preference number: 1 (lower is better) Translates to: HSRRVIPLFIGDGCI*IDPVIDDFQIPLLY Trigger: GTATAACAGTGGGATTTGGAAATCATCAATGACAGGATCTATCCATATGCAGCCATCTCCTATGAAGAGTGGAATGACCCTCCTGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR CCA 90 bp | CATCATTTGCCTACTAAAGGACCTTTGTTGTGTTGCTCAGCTCTCTaGGACTGTGACAAAATGCCTGTGACCATCAATTTAAAAGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: HHLPTKGPLLCCSAL*DCDKMPVTINLKAK Trigger: TTTTGCTTTTAAATTGATGGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCCTTTAGTAGGCAAATGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR CAA 90 bp | GAGGCTCTCCACGCGGTCGTAGGTGAGGACGATGGCAGTGAAGCCTaGGGACTGAGGTGGGATCAGCGGCAGGAAGAGCGGGTTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EALHAVVGEDDGSEA*GLRWDQRQEERVAH Trigger: GTGAGCAACCCGCTCTTCCTGCCGCTGATCCCACCTCAGTCCCAAGGCTTCACTGCCATCGTCCTCACCTACGACCGCGTGGAGAGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCCGCTCGGTGCTCCACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCCACTTGTTCATCTCGTaGTCCCAGAGATGCAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: RVRSVLHHLEGHRSEDGSHLFIS*SQRCRR Trigger: CCGCCTGCATCTCTGGGACCACGAGATGAACAAGTG...GCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACCGAGCGGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CCA 90 bp | TCGTCAGAGGTCAGCATGATGATGTCGTCATCGATGGCCAGCACGGCCTCTGTCGCAGCTTGGACAGACTaGGCACCTTGGACACCTCGG | + |
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Preference number: 2 (lower is better) Translates to: SSEVSMMMSSSMASTASVAAWTD*APWTPR Trigger: CCGAGGTGTCCAAGGTGCCCAGTCTGTCCAAGCTGC...GACAGAGGCCGTGCTGGCCATCGATGACGACATCATCATGCTGACCTCTGACGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR CAA 90 bp | GGTGAACTGCACCAGCAAGCCGAGAGTGATGCGCTGGGCTCCAAGTaGCAGCCTGTCCCTGAGGCTTCCTTCCTTTGGCATTTTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: GELHQQAESDALGSK*QPVPEASFLWHFHR Trigger: TCTGTGAAAATGCCAAAGGAAGGAAGCCTCAGGGACAGGCTGCAACTTGGAGCCCAGCGCATCACTCTCGGCTTGCTGGTGCAGTTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCGAGGACAAAGCAGGCTaGGCAGCCAGCTCAACGAGC | + |
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Preference number: 2 (lower is better) Translates to: SEVLGSVAHGRFALSRVCEDKAG*AASSTS Trigger: GCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTC...GCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR CAA 90 bp | GTCTGGTCTAGGGAGAGCCCGTCGATGGCCGTGCACTCAGGACACTaGAACTTCTTCCTTGGGGTTACCTTGATGACAGCTTTCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VWSRESPSMAVHSGH*NFFLGVTLMTAFPV Trigger: CACAGGGAAAGCTGTCATCAAGGTAACCCCAAGGAAGAAGTTCAAGTGTCCTGAGTGCACGGCCATCGACGGGCTCTCCCTAGACCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCGCATGTGAAATGACTCGCTGGGCTCCAAGTTaGAGCCTGTCCCTGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SVAHGRFALSRVCACEMTRWAPS*SLSLRL Trigger: AAGCCTCAGGGACAGGCTGCAACTTGGAGCCCAGCG...AGTCATTTCACATGCGCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCAGCCGAACCTTAGTTCCAACAGGCAGCCTTTCGCCTTCTCTTGCTAAGGTAGCAGAGAAGGACTaGAGGATGAGCACGCGGACC | + |
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Preference number: 2 (lower is better) Translates to: TCSRTLVPTGSLSPSLAKVAEKD*RMSTRT Trigger: GGTCCGCGTGCTCATCCTCCAGTCCTTCTCTGCTAC...CTTAGCAAGAGAAGGCGAAAGGCTGCCTGTTGGAACTAAGGTTCGGCTGCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144780.2 |
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| 3UTR-3UTR TCA 90 bp | AACGATTACTTAGCTTGTTTTCTGCAGTCCTCACAACCTTCAGGGGAACTCGGAGTGAAGCCTTGGGACTaGGGTGGGATCAGCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NDYLACFLQSSQPSGELGVKPWD*GGISGR Trigger: CCTGCCGCTGATCCCACCTCAGTCCCAAGGCTTCAC...TCCGAGTTCCCCTGAAGGTTGTGAGGACTGCAGAAAACAAGCTAAGTAATCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGCTGGCTTCCAGCAGCTGTCCTTCCATCTCCAACATAGTCCCATAAATGATGGAGGCTGGAGTTaGCTTCTCTTCAGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GGAGFQQLSFHLQHSPINDGGWS*LLFRGR Trigger: TCTGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATC...ATTTATGGGACTATGTTGGAGATGGAAGGACAGCTGCTGGAAGCCAGCACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
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| 3UTR CAA 90 bp | CCACGTGCTCCTCAGCCTGCTCATCATTTGCCTACTAAAGGACCTTaGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATGCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PRAPQPAHHLPTKGP*LCCSALWDCDKMPV Trigger: CACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCCTTTAGTAGGCAAATGATGAGCAGGCTGAGGAGCACGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATGGACCTTTGTTGTGTTaGTCAGCTCTCTGGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: ANHLPSAPPFLSFPSAHDGPLLC*SALWDC Trigger: ACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCC...ATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR-3UTR CCA 90 bp | TCGGTGCTCCACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTACTCTTCATAGGAGATaGCTGCATATGGATAGATCC | + |
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Preference number: 2 (lower is better) Translates to: SVLHHLEGHRSEDGSKLVTLHRR*LHMDRS Trigger: GGATCTATCCATATGCAGCCATCTCCTATGAAGAGT...AACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGTCTCGATTTCGTCGTAAGGGAAGAAACGATTACTTAGCTTGTTTTCTGGCCTTGGGACTGAGGTaGGATCAGCGGCAGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: PLSRFRRKGRNDYLACFLALGLR*DQRQEE Trigger: CTCTTCCTGCCGCTGATCCCACCTCAGTCCCAAGGC...CAGAAAACAAGCTAAGTAATCGTTTCTTCCCTTACGACGAAATCGAGACAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR GCA 90 bp | ACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTTGTAATTCCACCACGTaGTCCTCAGCCTGCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: TICPLRLHSYLSQVHMITCNSTT*SSACSS Trigger: TGATGAGCAGGCTGAGGAGCACGTGGTGGAATTACA...AGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR CAA 90 bp | AAAAAGCCAAAACAAAGAGTTGATCAGGGACTTTCAGTAGACATCTaGGCAGCCTGTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KKPKQRVDQGLSVDI*AACALLWIWAHDSG Trigger: ACCTGAGTCATGAGCCCAGATCCACAGCAGAGCACAGGCTGCCAAGATGTCTACTGAAAGTCCCTGATCAACTCTTTGTTTTGGCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR CAA 90 bp | TTACTAAGTGTAATTCCACCACGTGCTCCTCAGCCTGCTCATCATTaGCCTACTAAAGGACCTTTGTTGTGTTGCTCAGCTCTCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLSVIPPRAPQPAHH*PTKGPLLCCSALWD Trigger: GTCCCAGAGAGCTGAGCAACACAACAAAGGTCCTTTAGTAGGCAAATGATGAGCAGGCTGAGGAGCACGTGGTGGAATTACACTTAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGATGCACTCAGATTATCCACCCAGTTCTTaGTGTCTCCAGGCATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: TLRGIVPKTEANLLMHSDYPPSS*CLQAFC Trigger: ACAAAATGCCTGGAGACATCAAGAACTGGGTGGATA...ATCTGAGTGCATCAACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGATGCACTCAGATCTTGAACTTCTTCCTTaGGGTTACCTTGATGACAGC | + |
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Preference number: 2 (lower is better) Translates to: TLRGIVPKTEANLLMHSDLELLP*GYLDDS Trigger: GCTGTCATCAAGGTAACCCCAAGGAAGAAGTTCAAG...ATCTGAGTGCATCAACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTTGTTGCTCAGCTCTCTaGGACTGTGACAAAATGCCT | + |
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Preference number: 2 (lower is better) Translates to: TICPLRLHSYLSQVHMITCCSAL*DCDKMP Trigger: AGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACA...AGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR-3UTR TCA 90 bp | CGTATTGTGTGGGTGGTTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCAGCTCTCTGGGACTGTaGCAAAATGCCTGTGACCAT | + |
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Preference number: 2 (lower is better) Translates to: RIVWVVCFFTKCNSTTCSSSLGL*QNACDH Trigger: ATGGTCACAGGCATTTTGTCACAGTCCCAGAGAGCT...GGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAACCACCCACACAATACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCATTCTCAGGCTGGTTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCGACCAACACCTTTCCTaGCTGCTTATTTATCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: CSFSGWFPYMCSVLLRLPDQHLS*LLIYLL Trigger: CAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTC...GGGGAGTCTCAGAAGCACACTACACATATAAGGGAACCAGCCTGAGAATGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTGATGTCTCCAGGCATTTTGTAGGTGTACAGGTAATTAAAATACTTGTGGGGGAACTCGGATTTTaGGCCACAGAGATTCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: VLDVSRHFVGVQVIKILVGELGF*ATEILP Trigger: CGGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCCC...CACAAGTATTTTAATTACCTGTACACCTACAAAATGCCTGGAGACATCAAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR GCA 90 bp | CGTATTGTGTGGGTGGTTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCAAAAAGGGTTCTCATTaGTTTGGACGTTCTAGACCA | + |
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Preference number: 2 (lower is better) Translates to: RIVWVVCFFTKCNSTTCSKKGSH*FGRSRP Trigger: TGGTCTAGAACGTCCAAAGCAATGAGAACCCTTTTT...GGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAACCACCCACACAATACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCTCAGCCTGCTCATCAAACACCTTTCCTGCCTaGTTATTTATCTCTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: VCFFTKCNSTTCSSACSSNTFPA*LFISCQ Trigger: TTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTT...TGATGAGCAGGCTGAGGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR CCA 72 bp | AGGCTGCGCAGCCAGCTCAACGAGCTCCAGTGTGTTTaGGAAGTCGGACCCAGGCTGGCCTCCCTGGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: RLRSQLNELQCV*EVGPRLASLAP Trigger: TGGGGCCAGGGAGGCCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCTGGCTGCGCAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR CCA 72 bp | CTTGTTCATCTCGTGGTCCCAGAGATGCAGGCGGCCTaGGTAGCCCACCAGGCGGTCGGGAAATTCCCGCCA | + |
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Preference number: 3 (lower is better) Translates to: LVHLVVPEMQAA*VAHQAVGKFPP Trigger: TGGCGGGAATTTCCCGACCGCCTGGTGGGCTACCCAGGCCGCCTGCATCTCTGGGACCACGAGATGAACAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CAA 90 bp | ACTTGTTCATCTCGTGGTCCCAGAGATGCAGGCGGCCTGGGTAGCCCACCAGGCGACAGACTGGGCACCTaGGACACCTCGGTGATGACC | + |
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Preference number: 3 (lower is better) Translates to: TCSSRGPRDAGGLGSPPGDRLGT*DTSVMT Trigger: GGTCATCACCGAGGTGTCCAAGGTGCCCAGTCTGTC...GCCTGGTGGGCTACCCAGGCCGCCTGCATCTCTGGGACCACGAGATGAACAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR CCA 72 bp | GAGATGCCGGTTCATTCCCAGTTCCCCTGGTGGGGGTaGGGAGAACTACCCAGCCCTCACCCTGAGACTCCT | + |
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Preference number: 3 (lower is better) Translates to: EMPVHSQFPWWG*GELPSPHPETP Trigger: AGGAGTCTCAGGGTGAGGGCTGGGTAGTTCTCCCCACCCCCACCAGGGGAACTGGGAATGAACCGGCATCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144780.2 |
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| 3UTR CCA 72 bp | GGTGAGGACGATGGCAGTGAAGCCTTGGGACTGAGGTaGGATCAGCGGCAGGAAGAGCGGGTTGCTCACACT | + |
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Preference number: 3 (lower is better) Translates to: GEDDGSEALGLR*DQRQEERVAHT Trigger: AGTGTGAGCAACCCGCTCTTCCTGCCGCTGATCCCACCTCAGTCCCAAGGCTTCACTGCCATCGTCCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR CCA 72 bp | GGCAGCCTTTCGCCTTCTCTTGCTAAGGCTCAGGGCTaGGGCAGCACCCATCCTGGAGATGCCGGTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: GSLSPSLAKAQG*GSTHPGDAGSF Trigger: GAATGAACCGGCATCTCCAGGATGGGTGCTGCCCCAGCCCTGAGCCTTAGCAAGAGAAGGCGAAAGGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144780.2 |
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| 3UTR-3UTR CAA 90 bp | CCAAACTGCAGCTCGTCAGAGGTCAGCATGATGATGTCGTCATCGATGGCCAGCCAGACCACCAGCAGCTaGGACAGACTGGGCACCTTG | + |
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Preference number: 3 (lower is better) Translates to: PNCSSSEVSMMMSSSMASQTTSS*DRLGTL Trigger: CAAGGTGCCCAGTCTGTCCAAGCTGCTGGTGGTCTG...GCTGGCCATCGATGACGACATCATCATGCTGACCTCTGACGAGCTGCAGTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR TCA 72 bp | TGTAGAGGACAGGGTCCGCTCGGTGCTCCACCACCTTaGGGGGCATCGTTCCGAAGACGGAAGCAAACTTGT | + |
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Preference number: 3 (lower is better) Translates to: CRGQGPLGAPPP*GASFRRRKQTC Trigger: ACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACCGAGCGGACCCTGTCCTCTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR TCA 72 bp | GCAAACTTGTTGATGCACTCAGATCTCTCTACCATGTaGGTCTGGTCTAGGGAGAGCCCGTCGATGGCCGTG | + |
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Preference number: 3 (lower is better) Translates to: ANLLMHSDLSTM*VWSRESPSMAV Trigger: CACGGCCATCGACGGGCTCTCCCTAGACCAGACTCACATGGTAGAGAGATCTGAGTGCATCAACAAGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR GCA 72 bp | TCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTaGGCATGTGAAATGACTGCAAGGCTCTGCTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SVAHGRFALSRV*ACEMTARLCCD Trigger: GTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR-3UTR CAA 90 bp | ACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGATGCACTCAAGGGGAACTCGGATTTaGGGCCACAGAGATTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: TTLRGIVPKTEANLLMHSRGTRI*GHRDSS Trigger: GGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCCCT...TGAGTGCATCAACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| 3UTR-3UTR CAA 90 bp | TCGGTGCTCCACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGTATCCACCCAGTTCTaGATGTCTCCAGGCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SVLHHLEGHRSEDGSKLVVSTQF*MSPGIL Trigger: CAAAATGCCTGGAGACATCAAGAACTGGGTGGATAC...AACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| 3UTR GCA 72 bp | AGTCATGAGGGCGATGAAATACAGCCTCTCACAACTTaGAGCCGAACCTTAGTTCCAACAGGCAGCCTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: SHEGDEIQPLTT*SRTLVPTGSLS Trigger: CGAAAGGCTGCCTGTTGGAACTAAGGTTCGGCTGCAAGTTGTGAGAGGCTGTATTTCATCGCCCTCATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144780.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGATGCACTCAACCATGGACACCTCATaGGTCCATTCAGACTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: TTLRGIVPKTEANLLMHSTMDTS*VHSDSY Trigger: GTATGAGTCTGAATGGACCAATGAGGTGTCCATGGT...TGAGTGCATCAACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| 3UTR TCA 72 bp | TTGGGCCACAGAGATTCTTCCGGAGGGTTTTTATTCTaGTTATTCCAGACCACCAGCAGCTTGGACAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LGHRDSSGGFLF*LFQTTSSLDRL Trigger: CAGTCTGTCCAAGCTGCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCCGGAAGAATCTCTGTGGCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| 3UTR GCA 72 bp | GCTCATCATTTGCCTACTAAAGGACCTTTGTTGTGTTaGTCAGCTCTCTGGGACTGTGACAAAATGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AHHLPTKGPLLC*SALWDCDKMPV Trigger: CACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCCTTTAGTAGGCAAATGATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR TCA 72 bp | CATTCTTATCTTTCCCAAGTGCACATGATAACTGGATaGGTCACACCGTGTTCATTCTCAGGCTGGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSYLSQVHMITG*VTPCSFSGWFP Trigger: AGGGAACCAGCCTGAGAATGAACACGGTGTGACTCATCCAGTTATCATGTGCACTTGGGAAAGATAAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR CCA 72 bp | CCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTaGATGAGTCACACCGTGTTCATTCTCAGGCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPFLSFPSAHDN*MSHTVFILRLV Trigger: AACCAGCCTGAGAATGAACACGGTGTGACTCATCCAGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCATTCTCAGGCTGGTTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCAAAATGGGATTTACTaGTCAGAGATGAGCACCATT | + |
|
Preference number: 3 (lower is better) Translates to: CSFSGWFPYMCSVLLRLPQNGIY*SEMSTI Trigger: AATGGTGCTCATCTCTGACAAGTAAATCCCATTTTG...GGGGAGTCTCAGAAGCACACTACACATATAAGGGAACCAGCCTGAGAATGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR CCA 72 bp | CCTACTAAAGGACCTTTGTTGTGTTGCTCAGCTCTCTaGGACTGTGACAAAATGCCTGTGACCATCAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PTKGPLLCCSAL*DCDKMPVTINL Trigger: TAAATTGATGGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCCTTTAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR CCA 72 bp | ATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTaGGTGGTTTGTTTCTTTACTAAGTGTAATTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: MCSVLLRLPRIV*VVCFFTKCNST Trigger: GGTGGAATTACACTTAGTAAAGAAACAAACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR CCA 72 bp | AGGGTCATTCCACTCTTCATAGGAGATGGCTGCATATaGATAGATCCTGTCATTGATGATTTCCAAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RVIPLFIGDGCI*IDPVIDDFQIP Trigger: TGGGATTTGGAAATCATCAATGACAGGATCTATCCATATGCAGCCATCTCCTATGAAGAGTGGAATGACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGATGACAGCTTTCCCTGTGACATTGGCCACCAGAAAATTCATGGCAATATCAAACGATTACTTAGCTaGTTTTCTGCAGTCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LDDSFPCDIGHQKIHGNIKRLLS*FSAVLT Trigger: TGTGAGGACTGCAGAAAACAAGCTAAGTAATCGTTT...GATATTGCCATGAATTTTCTGGTGGCCAATGTCACAGGGAAAGCTGTCATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| 3UTR GCA 72 bp | CTCATTGCTTTGGACGTTCTAGACCAACACCTTTCCTaGCTGCTTATTTATCTCTTGTCAAAATGGGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: LIALDVLDQHLS*LLIYLLSKWDL Trigger: TAAATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAACGTCCAAAGCAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR CAA 72 bp | CAGGCTGCGCAGCCAGCTCAACGAGCTCCAGTGTGTTaGGGAAGTCGGACCCAGGCTGGCCTCCCTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QAAQPAQRAPVC*GSRTQAGLPGP Trigger: GGGGCCAGGGAGGCCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCTGGCTGCGCAGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | CTCGTGGTCCCAGAGATGCAGGCGGCCTGGGTAGCCCACCAGGCGGTCGGGAAAGTAGCGCCGGGGACCTaGTGCTTTCTCTGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVVPEMQAAWVAHQAVGKVAPGT*CFLWES Trigger: GCTCTCCCAGAGAAAGCACCAGGTCCCCGGCGCTAC...TTTCCCGACCGCCTGGTGGGCTACCCAGGCCGCCTGCATCTCTGGGACCACGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGCGGCCTGGGTAGCCCACCAGGCGGTCGGGAAATTCCCGCCAGACCTCAAGACCTGGTGCTGGTaGCAGCGCTTTCGCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MQAAWVAHQAVGKFPPDLKTWCW*QRFRTD Trigger: GTCCGTGCGAAAGCGCTGCCACCAGCACCAGGTCTT...GAGGTCTGGCGGGAATTTCCCGACCGCCTGGTGGGCTACCCAGGCCGCCTGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | CTCGTGGTCCCAGAGATGCAGGCGGCCTGGGTAGCCCACCAGGCGGTCGGGAAATCGAAGACCTGGTGCTaGTGGCAGCGCTTTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LVVPEMQAAWVAHQAVGKSKTWC*WQRFRT Trigger: CGTGCGAAAGCGCTGCCACCAGCACCAGGTCTTCGA...TTTCCCGACCGCCTGGTGGGCTACCCAGGCCGCCTGCATCTCTGGGACCACGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGGCACCTTGGACACCTCGGTGATGACCCGGAAGAGGCTCTCCACGCGGTCACATGCCCGTGGCTATaGGGCCCAGGAGGACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TGHLGHLGDDPEEALHAVTCPWL*GPGGRW Trigger: CCATCGTCCTCCTGGGCCTCATAGCCACGGGCATGT...GACCGCGTGGAGAGCCTCTTCCGGGTCATCACCGAGGTGTCCAAGGTGCCCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| 3UTR CAA 72 bp | CACGCGGTCGTAGGTGAGGACGATGGCAGTGAAGCCTaGGGACTGAGGTGGGATCAGCGGCAGGAAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HAVVGEDDGSEA*GLRWDQRQEER Trigger: CCGCTCTTCCTGCCGCTGATCCCACCTCAGTCCCAAGGCTTCACTGCCATCGTCCTCACCTACGACCGCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGTTCATCTCGTGGTCCCAGAGATGCAGGCGGCCTGGGTAGCCCACCAGGCGCCACCAGCCAGCAGTaGCCTGTCTCTGGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: TCSSRGPRDAGGLGSPPGATSQQ*PVSGDI Trigger: GATGTCCCCAGAGACAGGGCACTGCTGGCTGGTGGC...GCCTGGTGGGCTACCCAGGCCGCCTGCATCTCTGGGACCACGAGATGAACAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR GCA 90 bp | GAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGAGCTCCAGTGTGTTTGGGAAGACAGGGTCCGCTCGGTaGTCCACCACCTTGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDKAGCAASSTSSSVFGKTGSAR*STTLRG Trigger: GCCCCTCAAGGTGGTGGAGCACCGAGCGGACCCTGT...CTTCCCAAACACACTGGAGCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | TCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGAGCTCCAGCTTGGTCTTCATCCTTaGGATGAGGGCGGGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: STEMGGQSRLRSQLNELQLGLHP*DEGGTP Trigger: CGGGGTCCCGCCCTCATCCCAAGGATGAAGACCAAG...CTGGAGCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGACCTCCCACCTGGAAAGCTaGGCCAGGGCCTGCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLCCGSGLMTQVPSTVLTSHLES*ARACAV Trigger: GACGGCGCAGGCCCTGGCCCAGCTTTCCAGGTGGGA...GGTCAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | TGCGCAGCCAGCTCAACGAGCTCCAGTGTGTTTGGGAAGTCGGACCCAGGCTGGTCGAAGACCTGGTGCTaGTGGCAGCGCTTTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CAASSTSSSVFGKSDPGWSKTWC*WQRFRT Trigger: CGTGCGAAAGCGCTGCCACCAGCACCAGGTCTTCGA...CCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCTGGCTGCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGACCTCGCTCAGCACCGCCTaGCCCAGCCGAGCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VLCCGSGLMTQVPSTVLTSLSTA*PSRAPR Trigger: TCGAGGAGCTCGGCTGGGCCAGGCGGTGCTGAGCGA...GGTCAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCGGGGAAGTCATCTTTGTAGAGGACAGGGTCCGCTCGGTGCTCCACCATCGCTCAGCACCGCCTaGCCCAGCCGAGCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSRGSHLCRGQGPLGAPPSLSTA*PSRAPR Trigger: TCGAGGAGCTCGGCTGGGCCAGGCGGTGCTGAGCGA...TGGTGGAGCACCGAGCGGACCCTGTCCTCTACAAAGATGACTTCCCCGAGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGCCTGTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAACATGCCCGTGGCTATaGGGCCCAGGAGGACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WQPVLCCGSGLMTQVPSTTCPWL*GPGGRW Trigger: CCATCGTCCTCCTGGGCCTCATAGCCACGGGCATGT...TGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCACAGGCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | TCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGAGCTCCAGAGACCACCAGCAGCTTaGACAGACTGGGCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STEMGGQSRLRSQLNELQRPPAA*TDWAPW Trigger: CCAAGGTGCCCAGTCTGTCCAAGCTGCTGGTGGTCT...CTGGAGCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | TTCACAGAGTCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGGGAGAGCCCGTCGATaGCCGTGCACTCAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: FTESTEMGGQSRLRSQLNGRARR*PCTQDT Trigger: AGTGTCCTGAGTGCACGGCCATCGACGGGCTCTCCC...GTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGACTCTGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | AGGCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTGGCTTCTCTTCAGAGGCAGGGAGAGCCCGTCGATaGCCGTGCACTCAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: RLRQEAGMEAGVGFSSEAGRARR*PCTQDT Trigger: AGTGTCCTGAGTGCACGGCCATCGACGGGCTCTCCC...TGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCGCGTGAAGCCTTGGGACTaGGGTGGGATCAGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGIGICSPWQVCSLQSLRVKPWD*GGISGR Trigger: CCTGCCGCTGATCCCACCTCAGTCCCAAGGCTTCAC...GCGCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR GCA 90 bp | TGCGCAGCCAGCTCAACGAGCTCCAGTGTGTTTGGGAAGTCGGACCCAGGCTGGTGGAACGACCACAGATaGCCTCTTCCAGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CAASSTSSSVFGKSDPGWWNDHR*PLPVQN Trigger: GTTCTGGACTGGAAGAGGGCATCTGTGGTCGTTCCA...CCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCTGGCTGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | GGACCTTTGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATGCCTGTGACCTCCCACCTGGAAAGCTaGGCCAGGGCCTGCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLLCCSALWDCDKMPVTSHLES*ARACAV Trigger: GACGGCGCAGGCCCTGGCCCAGCTTTCCAGGTGGGA...GGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCGGGGAAGTCATCTTTGTAGAGGACAGGGTCCGCTCGGTGCTCCACCATTCCTCGATCCCACCTaGAAAGCTGGGCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRGSHLCRGQGPLGAPPFLDPT*KAGPGP Trigger: AGGCCCTGGCCCAGCTTTCCAGGTGGGATCGAGGAA...TGGTGGAGCACCGAGCGGACCCTGTCCTCTACAAAGATGACTTCCCCGAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCGGGGAAGTCATCTTTGTAGAGGACAGGGTCCGCTCGGTGCTCCACCAGCAGTGCCCTGTCTCTaGGGACATCCAGGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRGSHLCRGQGPLGAPPAVPCL*GHPGQC Trigger: ACACTGCCCTGGATGTCCCCAGAGACAGGGCACTGC...TGGTGGAGCACCGAGCGGACCCTGTCCTCTACAAAGATGACTTCCCCGAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCGCTCGGTGCTCCACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCACTAACACTGACTCTTaGTGTTTGGCCTGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVRSVLHHLEGHRSEDGSTNTDS*CLAWRA Trigger: AGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGT...GCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACCGAGCGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTGTGGACAAACCTTCTCCCCTAGCCCCACTGGCCCTTGGTAGCCAACCATCGAAGACCTGGTGCTaGTGGCAGCGCTTTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LFVDKPSPLAPLALGSQPSKTWC*WQRFRT Trigger: CGTGCGAAAGCGCTGCCACCAGCACCAGGTCTTCGA...TGGTTGGCTACCAAGGGCCAGTGGGGCTAGGGGAGAAGGTTTGTCCACAAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR TCA 90 bp | TCGGTGCTCCACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTTCTTCATCCTTGGGATaGGGGCGGGACCCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLHHLEGHRSEDGSKLVSSSLG*GRDPGC Trigger: ACATCCGGGGTCCCGCCCTCATCCCAAGGATGAAGA...AACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCCTGTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGAGAGCCATCTCAGCTaGCAGTGGGCTGAAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WQPVLCCGSGLMTQVPSTESHLS*QWAENR Trigger: CCTGTTTTCAGCCCACTGTCAGCTGAGATGGCTCTC...TGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCACAGGCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTGGCTTCTCTTCAGAGGCAGACTTGTGATAGAAGGCTaGGCCCGTGAGCACCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQAGSWDGGWSWLLFRGRLVIEG*AREHHG Trigger: TCCATGGTGCTCACGGGCGCAGCCTTCTATCACAAG...TCTGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCAACGAGCTCCAGTGTGTTTGGGAAGTCGGACCCAGGCTGGCCTCCCTGGCTGACTCTTGGTGTTTaGCCTGGAGGGCTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTSSSVFGKSDPGWPPWLTLGV*PGGLLV Trigger: AACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAG...CCAGGGAGGCCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | AGCTCAACGAGCTCCAGTGTGTTTGGGAAGTCGGACCCAGGCTGGCCTCCCTGGACTAACACTGACTCTTaGTGTTTGGCCTGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTSSSVFGKSDPGWPPWTNTDS*CLAWRA Trigger: AGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGT...CCAGGGAGGCCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR TCA 90 bp | AGCTCAACGAGCTCCAGTGTGTTTGGGAAGTCGGACCCAGGCTGGCCTCCCTGGTGCACTCAGGACACTTaGACTTCTTCCTTGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSSSVFGKSDPGWPPWCTQDT*TSSLGL Trigger: TAACCCCAAGGAAGAAGTTCAAGTGTCCTGAGTGCA...CCAGGGAGGCCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTGCGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGATCTAGCCACCAGCCAGCAGTaGCCTGTCTCTGGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: RVCACEMTARLCCDSWDLATSQQ*PVSGDI Trigger: GATGTCCCCAGAGACAGGGCACTGCTGGCTGGTGGC...TAGATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR GCA 90 bp | GGACCTTTGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATGCCTGTGACCGCCACCAGCCAGCAGTaGCCTGTCTCTGGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: GPLLCCSALWDCDKMPVTATSQQ*PVSGDI Trigger: GATGTCCCCAGAGACAGGGCACTGCTGGCTGGTGGC...GGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTGCGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGATCTAGCGCCGGGGACCTGGTaGTTTCTCTGGGAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVCACEMTARLCCDSWDLAPGTW*FLWESH Trigger: ATGGCTCTCCCAGAGAAAGCACCAGGTCCCCGGCGC...TAGATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR GCA 90 bp | TCTCGTGGTCCCAGAGATGCAGGCGGCCTGGGTAGCCCACCAGGCGGTCGGGAACAGAATATAAGAGTCTaGAATGACAACTGGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: SRGPRDAGGLGSPPGGREQNIRV*NDNWDT Trigger: TGTGTCCCAGTTGTCATTGCAGACTCTTATATTCTG...TTCCCGACCGCCTGGTGGGCTACCCAGGCCGCCTGCATCTCTGGGACCACGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGACCCCACACCCCCATCACTaGAGGACTCAATGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLCCGSGLMTQVPSTVLTPHPHH*RTQWSE Trigger: CTCACTCCATTGAGTCCTCCAGTGATGGGGGTGTGG...GGTCAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | GGACTGAGGTGGGATCAGCGGCAGGAAGAGCGGGTTGCTCACACTAGCCCACTTAGTCGCTGTCTGAGATaGCCGTCAGCAGTTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRWDQRQEERVAHTSPLSRCLR*PSAVHC Trigger: ACAATGAACTGCTGACGGCCATCTCAGACAGCGACT...AAGTGGGCTAGTGTGAGCAACCCGCTCTTCCTGCCGCTGATCCCACCTCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACATTCCTCGATCCCACCTaGAAAGCTGGGCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEASFLWHFHRVHGDGRTFLDPT*KAGPGP Trigger: AGGCCCTGGCCCAGCTTTCCAGGTGGGATCGAGGAA...TGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGCGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGATCTAGTAGCGCCGGGGACCTaGTGCTTTCTCTGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVCACEMTARLCCDSWDLVAPGT*CFLWES Trigger: GCTCTCCCAGAGAAAGCACCAGGTCCCCGGCGCTAC...TAGATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | TGTTCATTCTCAGGCTGGTTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCTCGCTCAGCACCGCCTaGCCCAGCCGAGCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSFSGWFPYMCSVLLRLPSLSTA*PSRAPR Trigger: TCGAGGAGCTCGGCTGGGCCAGGCGGTGCTGAGCGA...GGGGAGTCTCAGAAGCACACTACACATATAAGGGAACCAGCCTGAGAATGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CCA 90 bp | CTCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGGCAGCTTGGACAGACTaGGCACCTTGGACACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGIGICSPWQVCSLQSLAAWTD*APWTPR Trigger: CCGAGGTGTCCAAGGTGCCCAGTCTGTCCAAGCTGC...CAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | TTCACAGAGTCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGGGGAACTCGGATTTTaGGCCACAGAGATTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTESTEMGGQSRLRSQLNGELGF*ATEILP Trigger: CGGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCCC...GTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGACTCTGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR TCA 90 bp | GAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAAAGTCTTCATCCTTGGGATaGGGGCGGGACCCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: EASFLWHFHRVHGDGRTKSSSLG*GRDPGC Trigger: ACATCCGGGGTCCCGCCCTCATCCCAAGGATGAAGA...CTTTGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR TCA 90 bp | GTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGACCACAGACAGGCCCGGTTaGTGTCGTCTGTGTAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLCCGSGLMTQVPSTVLTTDRPG*CRLCSS Trigger: ACTACTACACAGACGACATCAACCGGGCCTGTCTGT...GGTCAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR TCA 90 bp | CTCTTTGTGGACAAACCTTCTCCCCTAGCCCCACTGGCCCTTGGTAGCCAACCAACAGACAGGCCCGGTTaGTGTCGTCTGTGTAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFVDKPSPLAPLALGSQPTDRPG*CRLCSS Trigger: ACTACTACACAGACGACATCAACCGGGCCTGTCTGT...TGGTTGGCTACCAAGGGCCAGTGGGGCTAGGGGAGAAGGTTTGTCCACAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR TCA 90 bp | AGCTCAACGAGCTCCAGTGTGTTTGGGAAGTCGGACCCAGGCTGGCCTCCCTGGGATGCTGTACACATCTaGCATCTTTTCCTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTSSSVFGKSDPGWPPWDAVHI*HLFLWN Trigger: GTTCCAGAGGAAAAGATGTCAGATGTGTACAGCATC...CCAGGGAGGCCAGCCTGGGTCCGACTTCCCAAACACACTGGAGCTCGTTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR TCA 90 bp | GAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAAAGGGTGCTCCACCACCTTaGGGGGCATCGTTCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EASFLWHFHRVHGDGRTKGAPPP*GASFRR Trigger: TCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACC...CTTTGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR TCA 90 bp | AAGAGCGGGTTGCTCACACTAGCCCACTTCACAGCAGGAGGGTCATTCCACTCTTCCCGGCTGGCTTCATaGAAGAGCTGTCTCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSGLLTLAHFTAGGSFHSSRLAS*KSCLCI Trigger: GATGCAGAGACAGCTCTTTCATGAAGCCAGCCGGGA...AGAGTGGAATGACCCTCCTGCTGTGAAGTGGGCTAGTGTGAGCAACCCGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR GCA 90 bp | ACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGATGCACTCAGATGCGCCGGGGACCTGGTaGTTTCTCTGGGAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRGIVPKTEANLLMHSDAPGTW*FLWESH Trigger: ATGGCTCTCCCAGAGAAAGCACCAGGTCCCCGGCGC...ATCTGAGTGCATCAACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR GCA 90 bp | CAGGCGGTCGGGAAATTCCCGCCAGACCTCATAACCAAACTGCAGCTCGTCAGATGGAACGACCACAGATaGCCTCTTCCAGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QAVGKFPPDLITKLQLVRWNDHR*PLPVQN Trigger: GTTCTGGACTGGAAGAGGGCATCTGTGGTCGTTCCA...TCTGACGAGCTGCAGTTTGGTTATGAGGTCTGGCGGGAATTTCCCGACCGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR GCA 90 bp | CTCTTTGTGGACAAACCTTCTCCCCTAGCCCCACTGGCCCTTGGTAGCCAACCATGGAACGACCACAGATaGCCTCTTCCAGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFVDKPSPLAPLALGSQPWNDHR*PLPVQN Trigger: GTTCTGGACTGGAAGAGGGCATCTGTGGTCGTTCCA...TGGTTGGCTACCAAGGGCCAGTGGGGCTAGGGGAGAAGGTTTGTCCACAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR GCA 90 bp | AGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCGCCTTGTGATAGAAGGCTaGGCCCGTGAGCACCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGIGICSPWQVCSLQSLRLVIEG*AREHHG Trigger: TCCATGGTGCTCACGGGCGCAGCCTTCTATCACAAG...GCGCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | TTCTTCCGGAGGGTTTTTATTCTGATTATTCCAGACCACCAGCAGCTTGGACAGTCCCACCTGGAAAGCTaGGCCAGGGCCTGCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFRRVFILIIPDHQQLGQSHLES*ARACAV Trigger: GACGGCGCAGGCCCTGGCCCAGCTTTCCAGGTGGGA...CTGTCCAAGCTGCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCCGGAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR CCA 90 bp | CAGGCGGTCGGGAAATTCCCGCCAGACCTCATAACCAAACTGCAGCTCGTCAGAGGCAGTGTTGTAATCTaGGGGAGCTCCAGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QAVGKFPPDLITKLQLVRGSVVI*GSSRQH Trigger: ATGTTGCCTGGAGCTCCCCCAGATTACAACACTGCC...TCTGACGAGCTGCAGTTTGGTTATGAGGTCTGGCGGGAATTTCCCGACCGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAAAGAAGACCTGGTGCTGGTaGCAGCGCTTTCGCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EASFLWHFHRVHGDGRTKKTWCW*QRFRTD Trigger: GTCCGTGCGAAAGCGCTGCCACCAGCACCAGGTCTT...CTTTGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGCGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGATCTAGCCTTGGGACTGAGGTaGGATCAGCGGCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVCACEMTARLCCDSWDLALGLR*DQRQEE Trigger: CTCTTCCTGCCGCTGATCCCACCTCAGTCCCAAGGC...TAGATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGCACTTGTTCATCTCGTaGTCCCAGAGATGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLRGIGICSPWQVCSLQHLFIS*SQRCRR Trigger: CCGCCTGCATCTCTGGGACCACGAGATGAACAAGTG...CTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGAGGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| 3UTR CAA 72 bp | AGGGAGAGCCCGTCGATGGCCGTGCACTCAGGACACTaGAACTTCTTCCTTGGGGTTACCTTGATGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RESPSMAVHSGH*NFFLGVTLMTA Trigger: AGCTGTCATCAAGGTAACCCCAAGGAAGAAGTTCAAGTGTCCTGAGTGCACGGCCATCGACGGGCTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR TCA 90 bp | CGGGAAATTCCCGCCAGACCTCATAACCAAACTGCAGCTCGTCAGAGGTCAGCACGATGGAGAACAGGGTaGCGTAGTAGATTCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: REIPARPHNQTAARQRSARWRTG*RSRFGA Trigger: AGCACCGAATCTACTACGTCACCCTGTTCTCCATCG...TGCTGACCTCTGACGAGCTGCAGTTTGGTTATGAGGTCTGGCGGGAATTTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR GCA 90 bp | GTCCCAAGCACAGTTCTGACCCTCAGAGGTATTGGGATCTGTAGCCCATGGCAGAATGGACTGGAAGTATaGCTCCCAGAACCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSTVLTLRGIGICSPWQNGLEV*LPEPPC Trigger: GCACGGTGGTTCTGGGAGGCATACTTCCAGTCCATT...CTGCCATGGGCTACAGATCCCAATACCTCTGAGGGTCAGAACTGTGCTTGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | TGTTCATTCTCAGGCTGGTTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCGTAGCGCCGGGGACCTaGTGCTTTCTCTGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSFSGWFPYMCSVLLRLPVAPGT*CFLWES Trigger: GCTCTCCCAGAGAAAGCACCAGGTCCCCGGCGCTAC...GGGGAGTCTCAGAAGCACACTACACATATAAGGGAACCAGCCTGAGAATGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CCA 90 bp | GTTTCTCGGGGAAGTCATCTTTGTAGAGGACAGGGTCCGCTCGGTGCTCCACCACTGACTCTTGGTGTTTaGCCTGGAGGGCTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSRGSHLCRGQGPLGAPPLTLGV*PGGLLV Trigger: AACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAG...TGGTGGAGCACCGAGCGGACCCTGTCCTCTACAAAGATGACTTCCCCGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR TCA 90 bp | ACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTTCTTCATCCTTGGGATaGGGGCGGGACCCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TICPLRLHSYLSQVHMITSSSLG*GRDPGC Trigger: ACATCCGGGGTCCCGCCCTCATCCCAAGGATGAAGA...AGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR TCA 90 bp | TTGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATGCCTGTGACCATCAATACATGCCCGTGGCTATaGGGCCCAGGAGGACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCCSALWDCDKMPVTINTCPWL*GPGGRW Trigger: CCATCGTCCTCCTGGGCCTCATAGCCACGGGCATGT...ATTGATGGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR TCA 90 bp | GTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGACCTTTTGTTCTTTGGGTTaGAGCCGCAGCGGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLCCGSGLMTQVPSTVLTFCSLG*SRSGRH Trigger: ATGTCTACCGCTGCGGCTTCAACCCAAAGAACAAAA...GGTCAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR TCA 90 bp | GCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTGGCTTCTCTTCAGAGGCAGATATCCACCCAGTTCTTaGTGTCTCCAGGCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQAGSWDGGWSWLLFRGRYPPSS*CLQAFC Trigger: ACAAAATGCCTGGAGACATCAAGAACTGGGTGGATA...TCTGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
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| CDS-3UTR TCA 90 bp | TTCACAGAGTCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACTCTTCACAGTTCATGTaGGTATCCACCCAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTESTEMGGQSRLRSQLNSSQFM*VSTQFL Trigger: CAAGAACTGGGTGGATACTCACATGAACTGTGAAGA...GTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGACTCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR TCA 90 bp | GCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTGGCTTCTCTTCAGAGGCAGATCTTCACAGTTCATGTaGGTATCCACCCAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQAGSWDGGWSWLLFRGRSSQFM*VSTQFL Trigger: CAAGAACTGGGTGGATACTCACATGAACTGTGAAGA...TCTGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
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| CDS-3UTR GCA 90 bp | GAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGAGCTCCAGTGTGTTTGGGAAGGGATGTTCTGCAGGATaGTGTACACATCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: EDKAGCAASSTSSSVFGKGCSAG*CTHLTS Trigger: AGATGTCAGATGTGTACAGCATCCTGCAGAACATCC...CTTCCCAAACACACTGGAGCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR GCA 90 bp | CCTGTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGCTCTGTGGGATGTTCTaGAGGATGCTGTACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLCCGSGLMTQVPSTVLLCGMF*RMLYTS Trigger: AGATGTGTACAGCATCCTGCAGAACATCCCACAGAG...CAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CCA 90 bp | ACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTGCAGTGCCCTGTCTCTaGGGACATCCAGGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TICPLRLHSYLSQVHMITAVPCL*GHPGQC Trigger: ACACTGCCCTGGATGTCCCCAGAGACAGGGCACTGC...AGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTGGGTGGTTGCAGCTTGGACAGACTaGGCACCTTGGACACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FPYMCSVLLRLPRIVWVVAAWTD*APWTPR Trigger: CCGAGGTGTCCAAGGTGCCCAGTCTGTCCAAGCTGC...AACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACATATAAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| 3UTR CAA 72 bp | GACACCTCATTGGTCCATTCAGACTCATACTTCCACTaGTTCATCTCGTGGTCCCAGAGATGCAGGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTSLVHSDSYFH*FISWSQRCRRP Trigger: AGGCCGCCTGCATCTCTGGGACCACGAGATGAACAAGTGGAAGTATGAGTCTGAATGGACCAATGAGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR TCA 90 bp | AAGAGCGGGTTGCTCACACTAGCCCACTTCACAGCAGGAGGGTCATTCCACTCTTTTTGTTCTTTGGGTTaGAGCCGCAGCGGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KSGLLTLAHFTAGGSFHSFCSLG*SRSGRH Trigger: ATGTCTACCGCTGCGGCTTCAACCCAAAGAACAAAA...AGAGTGGAATGACCCTCCTGCTGTGAAGTGGGCTAGTGTGAGCAACCCGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR TCA 90 bp | ACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGATGCACTCAACAGACAGGCCCGGTTaGTGTCGTCTGTGTAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTLRGIVPKTEANLLMHSTDRPG*CRLCSS Trigger: ACTACTACACAGACGACATCAACCGGGCCTGTCTGT...TGAGTGCATCAACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR TCA 90 bp | ACCTTGAGGGGCATCGTTCCGAAGACGGAAGCAAACTTGTTGATGCACTCAGATGAGAGCCATCTCAGCTaGCAGTGGGCTGAAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRGIVPKTEANLLMHSDESHLS*QWAENR Trigger: CCTGTTTTCAGCCCACTGTCAGCTGAGATGGCTCTC...ATCTGAGTGCATCAACAAGTTTGCTTCCGTCTTCGGAACGATGCCCCTCAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGGGAGGGTTTTTATTCTaGTTATTCCAGACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLCCGSGLMTQVPSTVLGGFLF*LFQTTS Trigger: GCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCC...CAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCGGAGGGTTTTTATTCTGATTATTCCAGACCACCAGCAGCTTGGACAGCTTGGTCTTCATCCTTaGGATGAGGGCGGGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FFRRVFILIIPDHQQLGQLGLHP*DEGGTP Trigger: CGGGGTCCCGCCCTCATCCCAAGGATGAAGACCAAG...CTGTCCAAGCTGCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCCGGAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGAGTCGCTGTCTGAGATaGCCGTCAGCAGTTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGIGICSPWQVCSLQSLSRCLR*PSAVHC Trigger: ACAATGAACTGCTGACGGCCATCTCAGACAGCGACT...CAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAAAGGGCAGTGTTGTAATCTaGGGGAGCTCCAGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: EASFLWHFHRVHGDGRTKGSVVI*GSSRQH Trigger: ATGTTGCCTGGAGCTCCCCCAGATTACAACACTGCC...CTTTGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | AGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCGCTTCAATCTGCCTCTGTaGGATGTTCTGCAGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGIGICSPWQVCSLQSLRFNLPL*DVLQDA Trigger: AGCATCCTGCAGAACATCCCACAGAGGCAGATTGAA...GCGCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTGGGTGGTTGAGAGCCATCTCAGCTaGCAGTGGGCTGAAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPYMCSVLLRLPRIVWVVESHLS*QWAENR Trigger: CCTGTTTTCAGCCCACTGTCAGCTGAGATGGCTCTC...AACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACATATAAGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCTCAGCCTGCTCATCATGTGAAGCCTTGGGACTaGGGTGGGATCAGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FVSLLSVIPPRAPQPAHHVKPWD*GGISGR Trigger: CCTGCCGCTGATCCCACCTCAGTCCCAAGGCTTCAC...ATGATGAGCAGGCTGAGGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAGTCGCTGTCTGAGATaGCCGTCAGCAGTTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ANHLPSAPPFLSFPSAHDSRCLR*PSAVHC Trigger: ACAATGAACTGCTGACGGCCATCTCAGACAGCGACT...ATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | CGTATTGTGTGGGTGGTTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCAAGACCTGGTGCTGGTaGCAGCGCTTTCGCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIVWVVCFFTKCNSTTCSKTWCW*QRFRTD Trigger: GTCCGTGCGAAAGCGCTGCCACCAGCACCAGGTCTT...GGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAACCACCCACACAATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGAACAGCCTCATATCAATGAGATCTCTTTGTGGACAAACCTTCTCCCCAGACCACCAGCAGCTTaGACAGACTGGGCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VREQPHINEISLWTNLLPRPPAA*TDWAPW Trigger: CCAAGGTGCCCAGTCTGTCCAAGCTGCTGGTGGTCT...GGGGAGAAGGTTTGTCCACAAAGAGATCTCATTGATATGAGGCTGTTCTCGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCAAGCACAGTTCTGACCCTCAGAGGTATTGGGATCTGTAGCCCATGGCAGCCATGGACACCTCATTaGTCCATTCAGACTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: VPSTVLTLRGIGICSPWQPWTPH*SIQTHT Trigger: AGTATGAGTCTGAATGGACCAATGAGGTGTCCATGG...CTGCCATGGGCTACAGATCCCAATACCTCTGAGGGTCAGAACTGTGCTTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGAGGTGCTGGCTTCCAGCAGCTGTCCTTCCATCTCCAACATAGTCCCCCATGGACACCTCATTaGTCCATTCAGACTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: AKGGAGFQQLSFHLQHSPPWTPH*SIQTHT Trigger: AGTATGAGTCTGAATGGACCAATGAGGTGTCCATGG...GGGACTATGTTGGAGATGGAAGGACAGCTGCTGGAAGCCAGCACCTCCTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAATATTGAACAGCAGGTaGTTTGTTCCTCGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PEASFLWHFHRVHGDGRTILNSR*FVPRSH Trigger: GTGGGATCGAGGAACAAATCACCTGCTGTTCAATAT...TGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGCTGGCTTCCAGCAGCTGTCCTTCCATCTCCAACATAGTCCCATAAATTGCACTCAGGACACTTaGACTTCTTCCTTGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GGAGFQQLSFHLQHSPINCTQDT*TSSLGL Trigger: TAACCCCAAGGAAGAAGTTCAAGTGTCCTGAGTGCA...ATTTATGGGACTATGTTGGAGATGGAAGGACAGCTGCTGGAAGCCAGCACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGACCCAGAATATAAGAGTCTaGAATGACAACTGGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: VLCCGSGLMTQVPSTVLTQNIRV*NDNWDT Trigger: TGTGTCCCAGTTGTCATTGCAGACTCTTATATTCTG...GGTCAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GGGAACTCGGATTTTGGGCCACAGAGATTCTTCCGGAGGGTTTTTATTCTGATTCCACACCCCCATCACTaGAGGACTCAATGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNSDFGPQRFFRRVFILIPHPHH*RTQWSE Trigger: CTCACTCCATTGAGTCCTCCAGTGATGGGGGTGTGG...AATCAGAATAAAAACCCTCCGGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTGGGTGGTTGGCAGTGTTGTAATCTaGGGGAGCTCCAGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FPYMCSVLLRLPRIVWVVGSVVI*GSSRQH Trigger: ATGTTGCCTGGAGCTCCCCCAGATTACAACACTGCC...AACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACATATAAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGATGGCTTTAATGGACTaGAAGTATGCCTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRGIGICSPWQVCSLQSLMALMD*KYASQN Trigger: GTTCTGGGAGGCATACTTCCAGTCCATTAAAGCCAT...CAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCTCAGCCTGCTCATCATGCCTTGGGACTGAGGTaGGATCAGCGGCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVSLLSVIPPRAPQPAHHALGLR*DQRQEE Trigger: CTCTTCCTGCCGCTGATCCCACCTCAGTCCCAAGGC...ATGATGAGCAGGCTGAGGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTGGCTTCTCTTCAGAGGCAGACCACCAGAAAATTCATaGCAATATCTTCACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQAGSWDGGWSWLLFRGRPPENS*QYLHSS Trigger: TGAACTGTGAAGATATTGCCATGAATTTTCTGGTGG...TCTGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCTTGAACTTCTTCCTTaGGGTTACCTTGATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGIGICSPWQVCSLQSLLELLP*GYLDDS Trigger: GCTGTCATCAAGGTAACCCCAAGGAAGAAGTTCAAG...CAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GTCCCAAGCACAGTTCTGACCCTCAGAGGTATTGGGATCTGTAGCCCATGGCAGATAAGCTGCCAATGTTaGGGAAGCTCTTCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSTVLTLRGIGICSPWQISCQC*GSSSVS Trigger: AGAAACTGAAGAGCTTCCCCAACATTGGCAGCTTAT...CTGCCATGGGCTACAGATCCCAATACCTCTGAGGGTCAGAACTGTGCTTGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| 3UTR CAA 72 bp | TCTGCAGTCCTCACAACCTTCAGGGGAACTCGGATTTaGGGCCACAGAGATTCTTCCGGAGGGTTTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVLTTFRGTRI*GHRDSSGGFLF Trigger: GAATAAAAACCCTCCGGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCCCTGAAGGTTGTGAGGACTGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCTTGGGGTTACCTTGATGACAGCTTTCCCTGTGACATTGGCCACCAGGATGCTGTACACATCTaGCATCTTTTCCTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPWGYLDDSFPCDIGHQDAVHI*HLFLWN Trigger: GTTCCAGAGGAAAAGATGTCAGATGTGTACAGCATC...CTGGTGGCCAATGTCACAGGGAAAGCTGTCATCAAGGTAACCCCAAGGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAAAGCAGTATCCACCCAGTTCTTaGTGTCTCCAGGCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFLWHFHRVHGDGRTKQYPPSS*CLQAFC Trigger: ACAAAATGCCTGGAGACATCAAGAACTGGGTGGATA...CTGCTTTGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR GCA 90 bp | GTTCGAGAACAGCCTCATATCAATGAGATCTCTTTGTGGACAAACCTTCTCCCCAATGGACTGGAAGTATaGCTCCCAGAACCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VREQPHINEISLWTNLLPNGLEV*LPEPPC Trigger: GCACGGTGGTTCTGGGAGGCATACTTCCAGTCCATT...GGGGAGAAGGTTTGTCCACAAAGAGATCTCATTGATATGAGGCTGTTCTCGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTTGTCAAAATGGGATCTTGGTCTTCATCCTTaGGATGAGGGCGGGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLDQHLSCLLIYLLSKWDLGLHP*DEGGTP Trigger: CGGGGTCCCGCCCTCATCCCAAGGATGAAGACCAAG...ATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTTGTCAAAATGGGATTTCCTCGATCCCACCTaGAAAGCTGGGCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLDQHLSCLLIYLLSKWDFLDPT*KAGPGP Trigger: AGGCCCTGGCCCAGCTTTCCAGGTGGGATCGAGGAA...ATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTGGGTGGTTCTGACTCTTGGTGTTTaGCCTGGAGGGCTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPYMCSVLLRLPRIVWVVLTLGV*PGGLLV Trigger: AACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAG...AACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACATATAAGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGAACAGCCTCATATCAATGAGATCTCTTTGTGGACAAACCTTCTCCCCGGGGAACTCGGATTTTaGGCCACAGAGATTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VREQPHINEISLWTNLLPGELGF*ATEILP Trigger: CGGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCCC...GGGGAGAAGGTTTGTCCACAAAGAGATCTCATTGATATGAGGCTGTTCTCGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | CAACATAGTCCCATAAATAGGCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTCTTGAACTTCTTCCTTaGGGTTACCTTGATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHSPINRLRQEAGMEAGVLELLP*GYLDDS Trigger: GCTGTCATCAAGGTAACCCCAAGGAAGAAGTTCAAG...AACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGCCTATTTATGGGACTATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
||
| 3UTR CAA 72 bp | AAACAAAGAGTTGATCAGGGACTTTCAGTAGACATCTaGGCAGCCTGTGCTCTGCTGTGGATCTGGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQRVDQGLSVDI*AACALLWIWAH Trigger: ATGAGCCCAGATCCACAGCAGAGCACAGGCTGCCAAGATGTCTACTGAAAGTCCCTGATCAACTCTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| 3UTR CAA 72 bp | CCTCAGCCTGCTCATCATTTGCCTACTAAAGGACCTTaGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQPAHHLPTKGP*LCCSALWDCDK Trigger: TTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCCTTTAGTAGGCAAATGATGAGCAGGCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTGGGTGGTTTTTTGTTCTTTGGGTTaGAGCCGCAGCGGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: FPYMCSVLLRLPRIVWVVFCSLG*SRSGRH Trigger: ATGTCTACCGCTGCGGCTTCAACCCAAAGAACAAAA...AACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACATATAAGGGAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR TCA 90 bp | CATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTGGATATTGAACAGCAGGTaGTTTGTTCCTCGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLPSAPPFLSFPSAHDNWILNSR*FVPRSH Trigger: GTGGGATCGAGGAACAAATCACCTGCTGTTCAATAT...CCAGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | ACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTTTCAATCTGCCTCTGTaGGATGTTCTGCAGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TICPLRLHSYLSQVHMITFNLPL*DVLQDA Trigger: AGCATCCTGCAGAACATCCCACAGAGGCAGATTGAA...AGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CCA 90 bp | TCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCGCATGTGAAATGACTACTCTTCATAGGAGATaGCTGCATATGGATAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SVAHGRFALSRVCACEMTTLHRR*LHMDRS Trigger: GGATCTATCCATATGCAGCCATCTCCTATGAAGAGT...AGTCATTTCACATGCGCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | GCCAACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATTTGGTCTCATTGCTTTaGGTCTGTGATGATGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ANHLPSAPPFLSFPSAHDLVSLL*VCDDVA Trigger: AGCTACATCATCACAGACCCAAAGCAATGAGACCAA...ATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCATTCTCAGGCTGGTTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCGATGCTGTACACATCTaGCATCTTTTCCTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSFSGWFPYMCSVLLRLPDAVHI*HLFLWN Trigger: GTTCCAGAGGAAAAGATGTCAGATGTGTACAGCATC...GGGGAGTCTCAGAAGCACACTACACATATAAGGGAACCAGCCTGAGAATGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCGGAGGGTTTTTATTCTGATTATTCCAGACCACCAGCAGCTTGGACAGCTCTGTGGGATGTTCTaGAGGATGCTGTACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FFRRVFILIIPDHQQLGQLCGMF*RMLYTS Trigger: AGATGTGTACAGCATCCTGCAGAACATCCCACAGAG...CTGTCCAAGCTGCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCCGGAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTGGGTGGTTCACAGTTGGTCTCATTaGTTTGGGTCTGTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPYMCSVLLRLPRIVWVVHSWSH*FGSVMM Trigger: CATCATCACAGACCCAAAGCAATGAGACCAACTGTG...AACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACATATAAGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGAGATTCTTCCGGAGGGTTTTTATTCTGATTATTCCAGACCACCAGCAGTTCAATCTGCCTCTGTaGGATGTTCTGCAGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQRFFRRVFILIIPDHQQFNLPL*DVLQDA Trigger: AGCATCCTGCAGAACATCCCACAGAGGCAGATTGAA...CTGCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCCGGAAGAATCTCTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGAGTCTGCCCACCAGAAAATTCATaGCAATATCTTCACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVLGSVAHGRFALSRVCPPENS*QYLHSS Trigger: TGAACTGTGAAGATATTGCCATGAATTTTCTGGTGG...GCAGACTCTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| 3UTR CAA 72 bp | CAGCCTGCTCATCATTTGCCTACTAAAGGACCTTTGTaGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QPAHHLPTKGPL*CCSALWDCDKM Trigger: CATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCCTTTAGTAGGCAAATGATGAGCAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR TCA 90 bp | AACGATTACTTAGCTTGTTTTCTGCAGTCCTCACAACCTTCAGGGGAACTCGGAATATTGAACAGCAGGTaGTTTGTTCCTCGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NDYLACFLQSSQPSGELGILNSR*FVPRSH Trigger: GTGGGATCGAGGAACAAATCACCTGCTGTTCAATAT...TCCGAGTTCCCCTGAAGGTTGTGAGGACTGCAGAAAACAAGCTAAGTAATCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR GCA 90 bp | ATTGGTCCATTCAGACTCATACTTCCACTTGTTCATCTCGTGGTCCCAGAGATGGGATGTTCTGCAGGATaGTGTACACATCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: IGPFRLILPLVHLVVPEMGCSAG*CTHLTS Trigger: AGATGTCAGATGTGTACAGCATCCTGCAGAACATCC...CATCTCTGGGACCACGAGATGAACAAGTGGAAGTATGAGTCTGAATGGACCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATGCCTGTGACCATCAATGGATGTTCTGCAGGATaGTGTACACATCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCCSALWDCDKMPVTINGCSAG*CTHLTS Trigger: AGATGTCAGATGTGTACAGCATCCTGCAGAACATCC...ATTGATGGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | AATCATATCAAAAAGCCAAAACAAAGAGTTGATCAGGGACTTTCAGTAGACATCGCAGTGCCCTGTCTCTaGGGACATCCAGGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHIKKPKQRVDQGLSVDIAVPCL*GHPGQC Trigger: ACACTGCCCTGGATGTCCCCAGAGACAGGGCACTGC...GATGTCTACTGAAAGTCCCTGATCAACTCTTTGTTTTGGCTTTTTGATATGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CCA 90 bp | ACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTACTCTTCATAGGAGATaGCTGCATATGGATAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TICPLRLHSYLSQVHMITTLHRR*LHMDRS Trigger: GGATCTATCCATATGCAGCCATCTCCTATGAAGAGT...AGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCTCAGCCTGCTCATCATCTCTGTGGGATGTTCTaGAGGATGCTGTACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FVSLLSVIPPRAPQPAHHLCGMF*RMLYTS Trigger: AGATGTGTACAGCATCCTGCAGAACATCCCACAGAG...ATGATGAGCAGGCTGAGGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTTGTCAAAATGGGATACTAACACTGACTCTTaGTGTTTGGCCTGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLDQHLSCLLIYLLSKWDTNTDS*CLAWRA Trigger: AGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGT...ATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR GCA 90 bp | GTTCGAGAACAGCCTCATATCAATGAGATCTCTTTGTGGACAAACCTTCTCCCCCAGAATATAAGAGTCTaGAATGACAACTGGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: VREQPHINEISLWTNLLPQNIRV*NDNWDT Trigger: TGTGTCCCAGTTGTCATTGCAGACTCTTATATTCTG...GGGGAGAAGGTTTGTCCACAAAGAGATCTCATTGATATGAGGCTGTTCTCGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCTCAGCCTGCTCATCATATGGCTTTAATGGACTaGAAGTATGCCTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FVSLLSVIPPRAPQPAHHMALMD*KYASQN Trigger: GTTCTGGGAGGCATACTTCCAGTCCATTAAAGCCAT...ATGATGAGCAGGCTGAGGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR TCA 90 bp | AATCATATCAAAAAGCCAAAACAAAGAGTTGATCAGGGACTTTCAGTAGACATCCGATGGAGAACAGGGTaGCGTAGTAGATTCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHIKKPKQRVDQGLSVDIRWRTG*RSRFGA Trigger: AGCACCGAATCTACTACGTCACCCTGTTCTCCATCG...GATGTCTACTGAAAGTCCCTGATCAACTCTTTGTTTTGGCTTTTTGATATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR TCA 90 bp | GTTCTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTTGTCAAAATGGGATGGAGGGTTTTTATTCTaGTTATTCCAGACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLDQHLSCLLIYLLSKWDGGFLF*LFQTTS Trigger: GCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCC...ATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| 3UTR CAA 72 bp | CTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTaGTCAAAATGGGATTTACTTGTCAGAGATGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDQHLSCLLIYL*SKWDLLVRDEH Trigger: GTGCTCATCTCTGACAAGTAAATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTCCGCTCGGTGCTCCACCACCTTGAGGGGCATCGTTCCGAAGACGGAAGCGCGGGACCCCGGATGTaGGACTTGACTGACGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RVRSVLHHLEGHRSEDGSAGPRM*DLTDAH Trigger: GTGTGCGTCAGTCAAGTCCAACATCCGGGGTCCCGC...GCTTCCGTCTTCGGAACGATGCCCCTCAAGGTGGTGGAGCACCGAGCGGACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CAA 90 bp | TCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGAGCTCCAGGCGGGACCCCGGATGTaGGACTTGACTGACGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: STEMGGQSRLRSQLNELQAGPRM*DLTDAH Trigger: GTGTGCGTCAGTCAAGTCCAACATCCGGGGTCCCGC...CTGGAGCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS CCA 90 bp | ACAACTGGGACACAGCCAGCCTGTAGGACATCGCTCAGCACCGCCTaGCCCAGCCGAGCTCCTCGAAGGACCGTACAAAAAGTAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTGTQPACRTSLSTA*PSRAPRRTVQKVAS Trigger: GGAGGCTACTTTTTGTACGGTCCTTCGAGGAGCTCGGCTGGGCCAGGCGGTGCTGAGCGATGTCCTACAGGCTGGCTGTGTCCCAGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGTGGGATCAGCGGCAGGAAGAGCGGGTTGCTCACACTAGCCCACTTCACGCCGTCAGCAGTTCATaGTACTCCCGGGAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRWDQRQEERVAHTSPLHAVSSS*YSREMA Trigger: CGCCATCTCCCGGGAGTACAATGAACTGCTGACGGC...GTGAAGTGGGCTAGTGTGAGCAACCCGCTCTTCCTGCCGCTGATCCCACCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS TCA 90 bp | GTAGCGCCGGGGACCTGGTGCTTTCTCTGGGAGAGCCATCTCAGCTaGCAGTGGGCTGAAAACAGGAATGCTGACATCGTAGCCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VAPGTWCFLWESHLS*QWAENRNADIVALP Trigger: CGGCAGGGCTACGATGTCAGCATTCCTGTTTTCAGCCCACTGTCAGCTGAGATGGCTCTCCCAGAGAAAGCACCAGGTCCCCGGCGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
||
| CDS CCA 90 bp | AGCTGGGCCAGGGCCTGCGCCGTCTCCTTTATTCGAAGGGGGTTCTaGTTTAGTACGTCAATGGAGGGGACGAACAGACAGGCCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SWARACAVSFIRRGF*FSTSMEGTNRQARL Trigger: CAACCGGGCCTGTCTGTTCGTCCCCTCCATTGACGTACTAAACCAGAACCCCCTTCGAATAAAGGAGACGGCGCAGGCCCTGGCCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCCTGTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGACAGACTGGGCACCTaGGACACCTCGGTGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: WQPVLCCGSGLMTQVPSTDRLGT*DTSVMT Trigger: GGTCATCACCGAGGTGTCCAAGGTGCCCAGTCTGTC...TGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCACAGGCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CAA 90 bp | TCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGAGCTCCAGACGCCCTCCGAGAGATaGGTGCATTTGTCCAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: STEMGGQSRLRSQLNELQTPSER*VHLSKT Trigger: AGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGT...CTGGAGCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCGGGGAAGTCATCTTTGTAGAGGACAGGGTCCGCTCGGTGCTCCACCAAGCCTCCTGCAGCACTaGGGGGTAATCGAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSRGSHLCRGQGPLGAPPSLLQH*GVIEDL Trigger: CAGGTCTTCGATTACCCCCAAGTGCTGCAGGAGGCT...TGGTGGAGCACCGAGCGGACCCTGTCCTCTACAAAGATGACTTCCCCGAGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS TCA 90 bp | GAACAGACAGGCCCGGTTGATGTCGTCTGTGTAGTAGTCGCTGTCTaGGATGGCCGTCAGCAGTTCATTGTACTCCCGGGAGATGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQTGPVDVVCVVVAV*DGRQQFIVLPGDGA Trigger: AGCGCCATCTCCCGGGAGTACAATGAACTGCTGACGGCCATCTCAGACAGCGACTACTACACAGACGACATCAACCGGGCCTGTCTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS GCA 90 bp | GGTGGCAGCGCTTTCGCACGGACAGGACGCCCTCCGAGAGATTGGTaGATTTGTCCAAGACTAACACTGACTCTTGGTGTTTGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGSAFARTGRPPRDW*ICPRLTLTLGVWPG Trigger: TCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGTCCTGTCCGTGCGAAAGCGCTGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CCA 90 bp | GCTGGTGGCAGCGCTTTCGCACGGACAGGACGCCCTCCGAGAGATTaGTGCATTTGTCCAAGACTAACACTGACTCTTGGTGTTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGGSAFARTGRPPRD*CICPRLTLTLGVWP Trigger: AGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGTCCTGTCCGTGCGAAAGCGCTGCCACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAAAGGCCGTCAGCAGTTCATaGTACTCCCGGGAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EASFLWHFHRVHGDGRTKAVSSS*YSREMA Trigger: CGCCATCTCCCGGGAGTACAATGAACTGCTGACGGC...CTTTGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | GGACCTTTGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATGCCTGTGACCGACAGACTGGGCACCTaGGACACCTCGGTGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: GPLLCCSALWDCDKMPVTDRLGT*DTSVMT Trigger: GGTCATCACCGAGGTGTCCAAGGTGCCCAGTCTGTC...GGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAAAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | ATGACTCAGGTCCCAAGCACAGTTCTGACCCTCAGAGGTATTGGGATCTGTAGCCAGACCACCAGCAGCTaGGACAGACTGGGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MTQVPSTVLTLRGIGICSQTTSS*DRLGTL Trigger: CAAGGTGCCCAGTCTGTCCAAGCTGCTGGTGGTCTG...GCTACAGATCCCAATACCTCTGAGGGTCAGAACTGTGCTTGGGACCTGAGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CAA 90 bp | GAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGAGCTCCAGTGTGTTTGGGAAGTTCCTTGGGGTTACCTaGATGACAGCTTTCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EDKAGCAASSTSSSVFGKFLGVT*MTAFPV Trigger: CACAGGGAAAGCTGTCATCAAGGTAACCCCAAGGAA...CTTCCCAAACACACTGGAGCTCGTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | TTCACAGAGTCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACGTGCACTCAGGACACTaGAACTTCTTCCTTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FTESTEMGGQSRLRSQLNVHSGH*NFFLGV Trigger: AACCCCAAGGAAGAAGTTCAAGTGTCCTGAGTGCAC...GTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGACTCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS TCA 90 bp | TCTGGTTTAGTACGTCAATGGAGGGGACGAACAGACAGGCCCGGTTaGTGTCGTCTGTGTAGTAGTCGCTGTCTGAGATGGCCGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLVRQWRGRTDRPG*CRLCSSRCLRWPSA Trigger: TGCTGACGGCCATCTCAGACAGCGACTACTACACAGACGACATCAACCGGGCCTGTCTGTTCGTCCCCTCCATTGACGTACTAAACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | TGTTCATTCTCAGGCTGGTTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCGCGGGACCCCGGATGTaGGACTTGACTGACGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: CSFSGWFPYMCSVLLRLPAGPRM*DLTDAH Trigger: GTGTGCGTCAGTCAAGTCCAACATCCGGGGTCCCGC...GGGGAGTCTCAGAAGCACACTACACATATAAGGGAACCAGCCTGAGAATGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | AGAGTCTGCGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGATCTAAGCCTCCTGCAGCACTaGGGGGTAATCGAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RVCACEMTARLCCDSWDLSLLQH*GVIEDL Trigger: CAGGTCTTCGATTACCCCCAAGTGCTGCAGGAGGCT...TAGATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | GCCAACCATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAGCCTCCTGCAGCACTaGGGGGTAATCGAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANHLPSAPPFLSFPSAHDSLLQH*GVIEDL Trigger: CAGGTCTTCGATTACCCCCAAGTGCTGCAGGAGGCT...ATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATGGTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | TTCACAGAGTCCACGGAGATGGGAGGACAAAGCAGGCTGCGCAGCCAGCTCAACACCATGGACACCTCATaGGTCCATTCAGACTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: FTESTEMGGQSRLRSQLNTMDTS*VHSDSY Trigger: GTATGAGTCTGAATGGACCAATGAGGTGTCCATGGT...GTTGAGCTGGCTGCGCAGCCTGCTTTGTCCTCCCATCTCCGTGGACTCTGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | GCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTGGCTTCTCTTCAGAGGCAGAACCATGGACACCTCATaGGTCCATTCAGACTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: AQAGSWDGGWSWLLFRGRTMDTS*VHSDSY Trigger: GTATGAGTCTGAATGGACCAATGAGGTGTCCATGGT...TCTGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGGCAGGAAGCTGGGATGGAGGCTGGAGTTGGCTTCTCTTCAGAGGCAGAGTATCCACCCAGTTCTaGATGTCTCCAGGCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AQAGSWDGGWSWLLFRGRVSTQF*MSPGIL Trigger: CAAAATGCCTGGAGACATCAAGAACTGGGTGGATAC...TCTGCCTCTGAAGAGAAGCCAACTCCAGCCTCCATCCCAGCTTCCTGCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
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| CDS-3UTR CAA 90 bp | GCAAACCCGGGAGAGGCTGCTCTGAAGATAGGTAGCAGAGAAGGACTGGAGGATCAGCTAAGCGCATGCTaGATGACAGCTTTCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ANPGEAALKIGSREGLEDQLSAC*MTAFPV Trigger: CACAGGGAAAGCTGTCATCAAGCATGCGCTTAGCTG...ATCCTCCAGTCCTTCTCTGCTACCTATCTTCAGAGCAGCCTCTCCCGGGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144780.2 |
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| CDS TCA 90 bp | CATCCAGGGCAGTGTTGTAATCTGGGGGAGCTCCAGGCAACATATTaGACAGCAGGTGATTTGTTCCTCGATCCCACCTGGAAAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPGQCCNLGELQATY*TAGDLFLDPTWKAG Trigger: CCCAGCTTTCCAGGTGGGATCGAGGAACAAATCACCTGCTGTTCAATATGTTGCCTGGAGCTCCCCCAGATTACAACACTGCCCTGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACAACTGACTCTTGGTGTTaGGCCTGGAGGGCTTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PEASFLWHFHRVHGDGRTTDSWC*AWRASS Trigger: ACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGT...TGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | CTGACCCTCAGAGGTATTGGGATCTGTAGCCCATGGCAGGTTTGCTCTCTCCAGGACTCATACTTCCACTaGTTCATCTCGTGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTLRGIGICSPWQVCSLQDSYFH*FISWSQ Trigger: CTGGGACCACGAGATGAACAAGTGGAAGTATGAGTC...CTGGAGAGAGCAAACCTGCCATGGGCTACAGATCCCAATACCTCTGAGGGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | GCAAAAGGAGGTGCTGGCTTCCAGCAGCTGTCCTTCCATCTCCAACATAGTCCCGTGCACTCAGGACACTaGAACTTCTTCCTTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AKGGAGFQQLSFHLQHSPVHSGH*NFFLGV Trigger: AACCCCAAGGAAGAAGTTCAAGTGTCCTGAGTGCAC...GGGACTATGTTGGAGATGGAAGGACAGCTGCTGGAAGCCAGCACCTCCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
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| CDS GCA 90 bp | TATGCCTCCCAGAACCACCGTGCCTGTCTCTGCATCTCTTCAATCTaGCTCTGTGGGATGTTCTGCAGGATGCTGTACACATCTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: YASQNHRACLCISSI*LCGMFCRMLYTSDI Trigger: GATGTCAGATGTGTACAGCATCCTGCAGAACATCCCACAGAGGCAGATTGAAGAGATGCAGAGACAGGCACGGTGGTTCTGGGAGGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028623.13 ENSMUST00000184931.8 |
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| CDS CCA 90 bp | CCCTCCGAGAGATTGGTGCATTTGTCCAAGACTAACACTGACTCTTaGTGTTTGGCCTGGAGGGCTTCTAGTTCCTCTCTGTACTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSERLVHLSKTNTDS*CLAWRASSSSLYSG Trigger: CCCTGAGTACAGAGAGGAACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAATCTCTCGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CCA 90 bp | TCATTGATGATCTGTAGGGTGGCCAGGGCAATGGCTTTAATGGACTaGAAGTATGCCTCCCAGAACCACCGTGCCTGTCTCTGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLMICRVARAMALMD*KYASQNHRACLCIS Trigger: AGAGATGCAGAGACAGGCACGGTGGTTCTGGGAGGCATACTTCCAGTCCATTAAAGCCATTGCCCTGGCCACCCTACAGATCATCAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028623.13 ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | CCATTCAGACTCATACTTCCACTTGTTCATCTCGTGGTCCCAGAGATGCAGGCGACGCCCTCCGAGAGATaGGTGCATTTGTCCAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: PFRLILPLVHLVVPEMQATPSER*VHLSKT Trigger: AGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGT...CGCCTGCATCTCTGGGACCACGAGATGAACAAGTGGAAGTATGAGTCTGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
||
| CDS-3UTR CAA 90 bp | ATGACTCAGGTCCCAAGCACAGTTCTGACCCTCAGAGGTATTGGGATCTGTAGCAGGGGAACTCGGATTTaGGGCCACAGAGATTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MTQVPSTVLTLRGIGICSRGTRI*GHRDSS Trigger: GGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCCCT...GCTACAGATCCCAATACCTCTGAGGGTCAGAACTGTGCTTGGGACCTGAGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTGCTGTGGATCTGGGCTCATGACTCAGGTCCCAAGCACAGTTCTGACCACGGAAGCAAACTTGTaGATGCACTCAGATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLCCGSGLMTQVPSTVLTTEANL*MHSDLS Trigger: AGAGAGATCTGAGTGCATCAACAAGTTTGCTTCCGT...GGTCAGAACTGTGCTTGGGACCTGAGTCATGAGCCCAGATCCACAGCAGAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
||
| CDS CCA 90 bp | TTGGTGCATTTGTCCAAGACTAACACTGACTCTTGGTGTTTGGCCTaGAGGGCTTCTAGTTCCTCTCTGTACTCAGGGTGGATGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVHLSKTNTDSWCLA*RASSSSLYSGWMAI Trigger: GATGGCCATCCACCCTGAGTACAGAGAGGAACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | CGTATTGTGTGGGTGGTTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCGCCGTCAGCAGTTCATaGTACTCCCGGGAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RIVWVVCFFTKCNSTTCSAVSSS*YSREMA Trigger: CGCCATCTCCCGGGAGTACAATGAACTGCTGACGGC...GGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAACCACCCACACAATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | CATCTGCCCTCTGCGCCTCCATTCTTATCTTTCCCAAGTGCACATGATAACTGGACGCCCTCCGAGAGATaGGTGCATTTGTCCAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HLPSAPPFLSFPSAHDNWTPSER*VHLSKT Trigger: AGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGT...CCAGTTATCATGTGCACTTGGGAAAGATAAGAATGGAGGCGCAGAGGGCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGCTGGCTTCCAGCAGCTGTCCTTCCATCTCCAACATAGTCCCATAAATTTCCTTGGGGTTACCTaGATGACAGCTTTCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGAGFQQLSFHLQHSPINFLGVT*MTAFPV Trigger: CACAGGGAAAGCTGTCATCAAGGTAACCCCAAGGAA...ATTTATGGGACTATGTTGGAGATGGAAGGACAGCTGCTGGAAGCCAGCACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132429.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCAAGCACAGTTCTGACCCTCAGAGGTATTGGGATCTGTAGCCCATGGCAGAAGACGGAAGCAAACTaGTTGATGCACTCAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPSTVLTLRGIGICSPWQKTEAN*LMHSDL Trigger: GAGATCTGAGTGCATCAACAAGTTTGCTTCCGTCTT...CTGCCATGGGCTACAGATCCCAATACCTCTGAGGGTCAGAACTGTGCTTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCTTCCTTCCTTTGGCATTTTCACAGAGTCCACGGAGATGGGAGGACACATAAGCTGCCAATGTaGGGGAAGCTCTTCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PEASFLWHFHRVHGDGRTHKLPM*GKLFSF Trigger: GAAACTGAAGAGCTTCCCCAACATTGGCAGCTTATG...TGTCCTCCCATCTCCGTGGACTCTGTGAAAATGCCAAAGGAAGGAAGCCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS TCA 90 bp | TTCAATCTGCCTCTGTGGGATGTTCTGCAGGATGCTGTACACATCTaGCATCTTTTCCTCTGGAACGACCACAGATGCCCTCTTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: FNLPLWDVLQDAVHI*HLFLWNDHRCPLPV Trigger: GACTGGAAGAGGGCATCTGTGGTCGTTCCAGAGGAAAAGATGTCAGATGTGTACAGCATCCTGCAGAACATCCCACAGAGGCAGATTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CCA 90 bp | AGAGATTGGTGCATTTGTCCAAGACTAACACTGACTCTTGGTGTTTaGCCTGGAGGGCTTCTAGTTCCTCTCTGTACTCAGGGTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: RDWCICPRLTLTLGV*PGGLLVPLCTQGGW Trigger: CCATCCACCCTGAGTACAGAGAGGAACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | CTTCCGGAGGGTTTTTATTCTGATTATTCCAGACCACCAGCAGCTTGGACAGACACTGACTCTTGGTGTTaGGCCTGGAGGGCTTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: LPEGFYSDYSRPPAAWTDTDSWC*AWRASS Trigger: ACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGT...GTCTGTCCAAGCTGCTGGTGGTCTGGAATAATCAGAATAAAAACCCTCCGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTTATATGTGTAGTGTGCTTCTGAGACTCCCCCGTATTGTGTGGGTGGTTACTGACTCTTGGTGTTaGGCCTGGAGGGCTTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: FPYMCSVLLRLPRIVWVVTDSWC*AWRASS Trigger: ACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGT...AACCACCCACACAATACGGGGGAGTCTCAGAAGCACACTACACATATAAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | GTTCTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTTGTCAAAATGGGATCAGACCACCAGCAGCTaGGACAGACTGGGCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: VLDQHLSCLLIYLLSKWDQTTSS*DRLGTL Trigger: CAAGGTGCCCAGTCTGTCCAAGCTGCTGGTGGTCTG...ATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | TTGTTGTGTTGCTCAGCTCTCTGGGACTGTGACAAAATGCCTGTGACCATCAATAGGGGAACTCGGATTTaGGGCCACAGAGATTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LLCCSALWDCDKMPVTINRGTRI*GHRDSS Trigger: GGAAGAATCTCTGTGGCCCAAAATCCGAGTTCCCCT...ATTGATGGTCACAGGCATTTTGTCACAGTCCCAGAGAGCTGAGCAACACAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | AGAGTCTGCGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGATCTAATGTACACCTTGATTTaGTTCTTTGGGTTGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: RVCACEMTARLCCDSWDLMYTLI*FFGLKP Trigger: CGGCTTCAACCCAAAGAACAAAATCAAGGTGTACAT...TAGATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | AGAGTCTGCGCATGTGAAATGACTGCAAGGCTCTGCTGTGACTCCTGGGATCTAAAACGATTACTTAGCTaGTTTTCTGCAGTCCTCACA | + |
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Preference number: 5 (lower is better) Translates to: RVCACEMTARLCCDSWDLKRLLS*FSAVLT Trigger: TGTGAGGACTGCAGAAAACAAGCTAAGTAATCGTTT...TAGATCCCAGGAGTCACAGCAGAGCCTTGCAGTCATTTCACATGCGCAGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS-3UTR CAA 90 bp | CGTATTGTGTGGGTGGTTTGTTTCTTTACTAAGTGTAATTCCACCACGTGCTCCTCACAGTTGGTCTCATaGCTTTGGGTCTGTGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: RIVWVVCFFTKCNSTTCSSQLVS*LWVCDD Trigger: ATCATCACAGACCCAAAGCAATGAGACCAACTGTGA...GGAGCACGTGGTGGAATTACACTTAGTAAAGAAACAAACCACCCACACAATACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | GTTCTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTTGTCAAAATGGGATGGATTCCTTTCACAGTaGGTCTCATTGCTTTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VLDQHLSCLLIYLLSKWDGFLSQ*VSLLWV Trigger: GACCCAAAGCAATGAGACCAACTGTGAAAGGAATCC...ATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGTCTCGATTTCGTCGTAAGGGAAGAAACGATTACTTAGCTTGTTTTCTGATGTACACCTTGATTTaGTTCTTTGGGTTGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PLSRFRRKGRNDYLACFLMYTLI*FFGLKP Trigger: CGGCTTCAACCCAAAGAACAAAATCAAGGTGTACAT...CAGAAAACAAGCTAAGTAATCGTTTCTTCCCTTACGACGAAATCGAGACAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125407.8 |
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| CDS-3UTR CAA 90 bp | GTTCTAGACCAACACCTTTCCTGCCTGCTTATTTATCTCTTGTCAAAATGGGATAAACGATTACTTAGCTaGTTTTCTGCAGTCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VLDQHLSCLLIYLLSKWDKRLLS*FSAVLT Trigger: TGTGAGGACTGCAGAAAACAAGCTAAGTAATCGTTT...ATCCCATTTTGACAAGAGATAAATAAGCAGGCAGGAAAGGTGTTGGTCTAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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| CDS-3UTR CAA 90 bp | AATCATATCAAAAAGCCAAAACAAAGAGTTGATCAGGGACTTTCAGTAGACATCGTATCCACCCAGTTCTaGATGTCTCCAGGCATTTTG | + |
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Preference number: 5 (lower is better) Translates to: NHIKKPKQRVDQGLSVDIVSTQF*MSPGIL Trigger: CAAAATGCCTGGAGACATCAAGAACTGGGTGGATAC...GATGTCTACTGAAAGTCCCTGATCAACTCTTTGTTTTGGCTTTTTGATATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028623.13 |
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| CDS CCA 72 bp | ACACAGCCAGCCTGTAGGACATCGCTCAGCACCGCCTaGCCCAGCCGAGCTCCTCGAAGGACCGTACAAAAA | + |
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Preference number: 6 (lower is better) Translates to: TQPACRTSLSTA*PSRAPRRTVQK Trigger: TTTTTGTACGGTCCTTCGAGGAGCTCGGCTGGGCCAGGCGGTGCTGAGCGATGTCCTACAGGCTGGCTGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | AGATGGCCGTCAGCAGTTCATTGTACTCCCGGGAGATaGCGCTGCTCACCGGAACACCGGCATCATCCACAT | + |
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Preference number: 6 (lower is better) Translates to: RWPSAVHCTPGR*RCSPEHRHHPH Trigger: ATGTGGATGATGCCGGTGTTCCGGTGAGCAGCGCCATCTCCCGGGAGTACAATGAACTGCTGACGGCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS CAA 90 bp | CAGCGCTTTCGCACGGACAGGACGCCCTCCGAGAGATTGGTGCATTaGTCCAAGACTAACACTGACTCTTGGTGTTTGGCCTGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: QRFRTDRTPSERLVH*SKTNTDSWCLAWRA Trigger: AGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGTCCTGTCCGTGCGAAAGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS TCA 72 bp | GGCCCGGTTGATGTCGTCTGTGTAGTAGTCGCTGTCTaGGATGGCCGTCAGCAGTTCATTGTACTCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GPVDVVCVVVAV*DGRQQFIVLPG Trigger: TCCCGGGAGTACAATGAACTGCTGACGGCCATCTCAGACAGCGACTACTACACAGACGACATCAACCGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | GGTGACGTAGTAGATTCGGTGCTTGGTCTTCATCCTTaGGATGAGGGCGGGACCCCGGATGTTGGACTTGAC | + |
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Preference number: 6 (lower is better) Translates to: GDVVDSVLGLHP*DEGGTPDVGLD Trigger: GTCAAGTCCAACATCCGGGGTCCCGCCCTCATCCCAAGGATGAAGACCAAGCACCGAATCTACTACGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028623.13 ENSMUST00000111248.8 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS TCA 72 bp | GTACGTCAATGGAGGGGACGAACAGACAGGCCCGGTTaGTGTCGTCTGTGTAGTAGTCGCTGTCTGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: VRQWRGRTDRPG*CRLCSSRCLRW Trigger: CCATCTCAGACAGCGACTACTACACAGACGACATCAACCGGGCCTGTCTGTTCGTCCCCTCCATTGACGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS GCA 72 bp | CCGTCAGCAGTTCATTGTACTCCCGGGAGATGGCGCTaGTCACCGGAACACCGGCATCATCCACATACTTTT | + |
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Preference number: 6 (lower is better) Translates to: PSAVHCTPGRWR*SPEHRHHPHTF Trigger: AAAAGTATGTGGATGATGCCGGTGTTCCGGTGAGCAGCGCCATCTCCCGGGAGTACAATGAACTGCTGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | TGCGTTTCTCCACACCCCCATCACTGGAGGACTCAATaGAGTGAGGCCAGAACTGAAACATGCCCGTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: CVSPHPHHWRTQ*SEARTETCPWL Trigger: TAGCCACGGGCATGTTTCAGTTCTGGCCTCACTCCATTGAGTCCTCCAGTGATGGGGGTGTGGAGAAACGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028623.13 ENSMUST00000111248.8 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | AGGGCCTGCGCCGTCTCCTTTATTCGAAGGGGGTTCTaGTTTAGTACGTCAATGGAGGGGACGAACAGACAG | + |
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Preference number: 6 (lower is better) Translates to: RACAVSFIRRGF*FSTSMEGTNRQ Trigger: CTGTCTGTTCGTCCCCTCCATTGACGTACTAAACCAGAACCCCCTTCGAATAAAGGAGACGGCGCAGGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | ATCTGTAGGGTGGCCAGGGCAATGGCTTTAATGGACTaGAAGTATGCCTCCCAGAACCACCGTGCCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ICRVARAMALMD*KYASQNHRACL Trigger: GAGACAGGCACGGTGGTTCTGGGAGGCATACTTCCAGTCCATTAAAGCCATTGCCCTGGCCACCCTACAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028623.13 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | AGCGCTTTCGCACGGACAGGACGCCCTCCGAGAGATTaGTGCATTTGTCCAAGACTAACACTGACTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAFARTGRPPRD*CICPRLTLTLG Trigger: ACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGTCCTGTCCGTGCGAAAGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS GCA 72 bp | GCTTTCGCACGGACAGGACGCCCTCCGAGAGATTGGTaGATTTGTCCAAGACTAACACTGACTCTTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: AFARTGRPPRDW*ICPRLTLTLGV Trigger: AACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCACCAATCTCTCGGAGGGCGTCCTGTCCGTGCGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS TCA 72 bp | CAGTGTTGTAATCTGGGGGAGCTCCAGGCAACATATTaGACAGCAGGTGATTTGTTCCTCGATCCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: QCCNLGELQATY*TAGDLFLDPTW Trigger: CCAGGTGGGATCGAGGAACAAATCACCTGCTGTTCAATATGTTGCCTGGAGCTCCCCCAGATTACAACACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000145838.8 ENSMUST00000184931.8 |
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| CDS TCA 72 bp | CCTCTGTGGGATGTTCTGCAGGATGCTGTACACATCTaGCATCTTTTCCTCTGGAACGACCACAGATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLWDVLQDAVHI*HLFLWNDHRCP Trigger: AGGGCATCTGTGGTCGTTCCAGAGGAAAAGATGTCAGATGTGTACAGCATCCTGCAGAACATCCCACAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | TTGTCCAAGACTAACACTGACTCTTGGTGTTTGGCCTaGAGGGCTTCTAGTTCCTCTCTGTACTCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSKTNTDSWCLA*RASSSSLYSGW Trigger: CCACCCTGAGTACAGAGAGGAACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | TGCATTTGTCCAAGACTAACACTGACTCTTGGTGTTTaGCCTGGAGGGCTTCTAGTTCCTCTCTGTACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CICPRLTLTLGV*PGGLLVPLCTQ Trigger: CTGAGTACAGAGAGGAACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CAA 72 bp | GTGCATTTGTCCAAGACTAACACTGACTCTTGGTGTTaGGCCTGGAGGGCTTCTAGTTCCTCTCTGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: VHLSKTNTDSWC*AWRASSSSLYS Trigger: TGAGTACAGAGAGGAACTAGAAGCCCTCCAGGCCAAACACCAAGAGTCAGTGTTAGTCTTGGACAAATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028623.13 ENSMUST00000125407.8 ENSMUST00000184931.8 |
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| CDS CCA 72 bp | TTGCGTGGATTCCTTTCACAGTTGGTCTCATTGCTTTaGGTCTGTGATGATGTAGCTCATCATGGAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LRGFLSQLVSLL*VCDDVAHHGGS Trigger: GCTTCCTCCATGATGAGCTACATCATCACAGACCCAAAGCAATGAGACCAACTGTGAAAGGAATCCACGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184931.8 |
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