RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXPH5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034584

Ensembl transcript IDs: ENSMUST00000051014.2

Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTTCCTGCCTGGCTGGCTTCTGACTGCAGACCTGCTCCCCCTGGCTaGGCCTCTTCAGCAAGCTGCAGCTTACACAATGCTGGTGTTAGA +
Preference number: 5 (lower is better)
Translates to: LPAWLASDCRPAPPG*ASSASCSLHNAGVR
Trigger: TCTAACACCAGCATTGTGTAAGCTGCAGCTTGCTGAAGAGGCTCAGCCAGGGGGAGCAGGTCTGCAGTCAGAAGCCAGCCAGGCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp CATCTCTGCTGTATTTGTTTCCTGACTTCCTGCCTGGCTGGCTTCTaGCTGCAGACCTGCTCCCCCTGGCTGAGCCTCTTCAGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: HLCCICFLTSCLAGF*LQTCSPWLSLFSKL
Trigger: CAGCTTGCTGAAGAGGCTCAGCCAGGGGGAGCAGGTCTGCAGTCAGAAGCCAGCCAGGCAGGAAGTCAGGAAACAAATACAGCAGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp GCGCCTAACTCTTCCCTTCCCCCTCCCATTCTTGAAGGGAGAGTATaGGTGGCAGTGAACAGCATCGTGTGGAAGTGCAGGACTGTCATG +
Preference number: 5 (lower is better)
Translates to: APNSSLPPPILEGRV*VAVNSIVWKCRTVM
Trigger: CATGACAGTCCTGCACTTCCACACGATGCTGTTCACTGCCACCCATACTCTCCCTTCAAGAATGGGAGGGGGAAGGGAAGAGTTAGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp ATCCAGGTAGTACTCGTCGTCTGTGGTTGTGTCTGTGTCCCAGTCTaGGACCAGTGGCTCCACTGGGTCGTCCTTGTAGATGTTAAGCGG +
Preference number: 5 (lower is better)
Translates to: IQVVLVVCGCVCVPV*DQWLHWVVLVDVKR
Trigger: CCGCTTAACATCTACAAGGACGACCCAGTGGAGCCACTGGTCTCAGACTGGGACACAGACACAACCACAGACGACGAGTACTACCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp CGTGAGATGCTGTGCCCGGGGGCCAGCTTGCTGTCATTGGTAGAATaGGTGGAAAGACTTTGCTCAAGATCTAAAAGAGCAGGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: REMLCPGASLLSLVE*VERLCSRSKRAGSL
Trigger: CAGGGAGCCTGCTCTTTTAGATCTTGAGCAAAGTCTTTCCACTCATTCTACCAATGACAGCAAGCTGGCCCCCGGGCACAGCATCTCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp CTGAAAACATATGTTCCATGGCCGGAAGAATGTGACCTCCAGTGCTaGGAAGGGACACCTTGGCTGCAAACAGATGGCGCCCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: LKTYVPWPEECDLQC*EGTPWLQTDGALFA
Trigger: AGCAAACAGGGCGCCATCTGTTTGCAGCCAAGGTGTCCCTTCTCAGCACTGGAGGTCACATTCTTCCGGCCATGGAACATATGTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp ATCTTCTCGGCCCCTGAAAACATATGTTCCATGGCCGGAAGAATGTaGCCTCCAGTGCTGAGAAGGGACACCTTGGCTGCAAACAGATGG +
Preference number: 5 (lower is better)
Translates to: IFSAPENICSMAGRM*PPVLRRDTLAANRW
Trigger: CCATCTGTTTGCAGCCAAGGTGTCCCTTCTCAGCACTGGAGGTCACATTCTTCCGGCCATGGAACATATGTTTTCAGGGGCCGAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp CGTCTCTGTGACTGGGATGTTGGGCTGGGTGTCAGTAAGAGACAGTaGGTCAGTAGAATGGCTACAGGCCACAGGAACTTCCGTACAGTT +
Preference number: 5 (lower is better)
Translates to: RLCDWDVGLGVSKRQ*VSRMATGHRNFRTV
Trigger: AACTGTACGGAAGTTCCTGTGGCCTGTAGCCATTCTACTGACTCACTGTCTCTTACTGACACCCAGCCCAACATCCCAGTCACAGAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 90 bp CAGAGAACATTTCAAAGTCCTTGTCAGAAGAAGGGAATGGGCCCCTaGTCTGGGGAAAGTCAGACCAGGACGAATACTCTTCCTGTCGGC +
Preference number: 5 (lower is better)
Translates to: QRTFQSPCQKKGMGP*SGESQTRTNTLPVG
Trigger: GCCGACAGGAAGAGTATTCGTCCTGGTCTGACTTTCCCCAGAGCAGGGGCCCATTCCCTTCTTCTGACAAGGACTTTGAAATGTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp GTCTCTCTATCTGGCAATTGGGAGACATCCTTACTTTCAGGGCTGTaGGAGAGACAGCATGGAGCGGAGTCAACCTGCATCTTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VSLSGNWETSLLSGL*ERQHGAESTCIFGS
Trigger: AGACCCAAAGATGCAGGTTGACTCCGCTCCATGCTGTCTCTCCCACAGCCCTGAAAGTAAGGATGTCTCCCAATTGCCAGATAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp CCAGAGGCCATGCCACCTGCACATGTCCCAGAATCTCTTCTGGTCTaGGAATTTTCATCATTATCTTCTGAGCGGGATGGGAGACCAGAG +
Preference number: 5 (lower is better)
Translates to: PEAMPPAHVPESLLV*EFSSLSSERDGRPE
Trigger: CTCTGGTCTCCCATCCCGCTCAGAAGATAATGATGAAAATTCCCAGACCAGAAGAGATTCTGGGACATGTGCAGGTGGCATGGCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp CAGTGGCTCCACTGGGTCGTCCTTGTAGATGTTAAGCGGCTCACTTaGAAATACACCATCTTCTGGCGCCTGACCTGCTGGAGAATTTAC +
Preference number: 5 (lower is better)
Translates to: QWLHWVVLVDVKRLT*KYTIFWRLTCWRIY
Trigger: GTAAATTCTCCAGCAGGTCAGGCGCCAGAAGATGGTGTATTTCCAAGTGAGCCGCTTAACATCTACAAGGACGACCCAGTGGAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp ATTATTTTCTGCAAAGTAGCTGTGGAATCCGGGAAGCTGGAACTCTaGGACTCCCTTCCGTCATCAGGGCTGAGAGGGAAGGGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: IIFCKVAVESGKLEL*DSLPSSGLRGKGVL
Trigger: CAGAACTCCCTTCCCTCTCAGCCCTGATGACGGAAGGGAGTCTCAGAGTTCCAGCTTCCCGGATTCCACAGCTACTTTGCAGAAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 90 bp AAACTCCTAGCAGTGAAACTCCCTGTGGCAGGTGAGGCTGATCTTTaGCGGCTGTCGAAGCACAGAGATGCACTCCCAAATGCATTCTTT +
Preference number: 5 (lower is better)
Translates to: KLLAVKLPVAGEADL*RLSKHRDALPNAFF
Trigger: AAAGAATGCATTTGGGAGTGCATCTCTGTGCTTCGACAGCCGGCAAAGATCAGCCTCACCTGCCACAGGGAGTTTCACTGCTAGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 90 bp TTACTTTCAGGGCTGTGGGAGAGACAGCATGGAGCGGAGTCAACCTaGATCTTTGGGTCTTGTGGTGGAGGTATTCCTGATTGCACTTGT +
Preference number: 5 (lower is better)
Translates to: LLSGLWERQHGAEST*IFGSCGGGIPDCTC
Trigger: ACAAGTGCAATCAGGAATACCTCCACCACAAGACCCAAAGATGCAGGTTGACTCCGCTCCATGCTGTCTCTCCCACAGCCCTGAAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 90 bp CAGCCATGTGATCCCTCCAAGGATACTGTCCATTTCCAGAGGCCATaGCACCTGCACATGTCCCAGAATCTCTTCTGGTCTGGGAATTTT +
Preference number: 5 (lower is better)
Translates to: QPCDPSKDTVHFQRP*HLHMSQNLFWSGNF
Trigger: AAAATTCCCAGACCAGAAGAGATTCTGGGACATGTGCAGGTGGCATGGCCTCTGGAAATGGACAGTATCCTTGGAGGGATCACATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp AACATTTCAAAGTCCTTGTCAGAAGAAGGGAATGGGCCCCTGCTCTaGGGAAAGTCAGACCAGGACGAATACTCTTCCTGTCGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: NISKSLSEEGNGPLL*GKSDQDEYSSCRLQ
Trigger: TTGGAGCCGACAGGAAGAGTATTCGTCCTGGTCTGACTTTCCCCAGAGCAGGGGCCCATTCCCTTCTTCTGACAAGGACTTTGAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp CTCCCCCGAAGGACACGAGATTGCCCTCTTGATGAGGAAAGGGAGTaGCCCTTTCCTAACCGAAGCAGATCTAATGGCTTTCATATCTGT +
Preference number: 5 (lower is better)
Translates to: LPRRTRDCPLDEERE*PFPNRSRSNGFHIC
Trigger: ACAGATATGAAAGCCATTAGATCTGCTTCGGTTAGGAAAGGGCCACTCCCTTTCCTCATCAAGAGGGCAATCTCGTGTCCTTCGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp AAGGCTTGGCTTTCTGAGTCAGAGAGCATTTTATCAGTCGGGTTTTaGCAGTCTGACCCAGTTGTCCCACTGGTTTCCCTAGGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: KAWLSESESILSVGF*QSDPVVPLVSLGCD
Trigger: GTCACAGCCTAGGGAAACCAGTGGGACAACTGGGTCAGACTGCCAAAACCCGACTGATAAAATGCTCTCTGACTCAGAAAGCCAAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp GTTCTGACTCTTTATCCTTTTCATCCAGGTAGTACTCGTCGTCTGTaGTTGTGTCTGTGTCCCAGTCTGAGACCAGTGGCTCCACTGGGT +
Preference number: 5 (lower is better)
Translates to: VLTLYPFHPGSTRRL*LCLCPSLRPVAPLG
Trigger: ACCCAGTGGAGCCACTGGTCTCAGACTGGGACACAGACACAACCACAGACGACGAGTACTACCTGGATGAAAAGGATAAAGAGTCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp AACACTGTAGTGGAAGGTACCAGACGAGCATCAAGGAAAGACTCTTaGGGTGCATCTGATGCCACATGTAAAGGAGCTCGTGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: NTVVEGTRRASRKDS*GASDATCKGAREML
Trigger: CAGCATCTCACGAGCTCCTTTACATGTGGCATCAGATGCACCCCAAGAGTCTTTCCTTGATGCTCGTCTGGTACCTTCCACTACAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp CGTTCCCTTACTTTCCTGCTGTCTGCTGTGAATGAGAAAGCTGGCTaGTTTTCTTGGCAAGGTGCAATAGACTGTGCTGAGCTCAGGATC +
Preference number: 5 (lower is better)
Translates to: RSLTFLLSAVNEKAG*FSWQGAIDCAELRI
Trigger: GATCCTGAGCTCAGCACAGTCTATTGCACCTTGCCAAGAAAACCAGCCAGCTTTCTCATTCACAGCAGACAGCAGGAAAGTAAGGGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp CATTTCCAGAGGCCATGCCACCTGCACATGTCCCAGAATCTCTTCTaGTCTGGGAATTTTCATCATTATCTTCTGAGCGGGATGGGAGAC +
Preference number: 5 (lower is better)
Translates to: HFQRPCHLHMSQNLF*SGNFHHYLLSGMGD
Trigger: GTCTCCCATCCCGCTCAGAAGATAATGATGAAAATTCCCAGACCAGAAGAGATTCTGGGACATGTGCAGGTGGCATGGCCTCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 90 bp GTGATCCCTCCAAGGATACTGTCCATTTCCAGAGGCCATGCCACCTaGACATGTCCCAGAATCTCTTCTGGTCTGGGAATTTTCATCATT +
Preference number: 5 (lower is better)
Translates to: VIPPRILSISRGHAT*TCPRISSGLGIFII
Trigger: AATGATGAAAATTCCCAGACCAGAAGAGATTCTGGGACATGTGCAGGTGGCATGGCCTCTGGAAATGGACAGTATCCTTGGAGGGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp TCCCTCATGATGGCTGGCTTAGGAACAAACACACTGGCAACTGGTTaGTTCCCAACAGGTGAATTGTATATTTTTGCCGAAGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SLMMAGLGTNTLATG*FPTGELYIFAEAVP
Trigger: GGGGACAGCTTCGGCAAAAATATACAATTCACCTGTTGGGAACCAACCAGTTGCCAGTGTGTTTGTTCCTAAGCCAGCCATCATGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp TGCTTCAACAGAGAACATTTCAAAGTCCTTGTCAGAAGAAGGGAATaGGCCCCTGCTCTGGGGAAAGTCAGACCAGGACGAATACTCTTC +
Preference number: 5 (lower is better)
Translates to: CFNREHFKVLVRRRE*APALGKVRPGRILF
Trigger: GAAGAGTATTCGTCCTGGTCTGACTTTCCCCAGAGCAGGGGCCCATTCCCTTCTTCTGACAAGGACTTTGAAATGTTCTCTGTTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp TGTCCCAGAATCTCTTCTGGTCTGGGAATTTTCATCATTATCTTCTaGGCGGGATGGGAGACCAGAGGGACCACTGTTTCCTCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: CPRISSGLGIFIIIF*AGWETRGTTVSSFR
Trigger: TCTAAAGGAGGAAACAGTGGTCCCTCTGGTCTCCCATCCCGCTCAGAAGATAATGATGAAAATTCCCAGACCAGAAGAGATTCTGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp TCAGCAAGCTGCAGCTTACACAATGCTGGTGTTAGAGCAAAGGCTTaGCTTTCTGAGTCAGAGAGCATTTTATCAGTCGGGTTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: SASCSLHNAGVRAKA*LSESESILSVGFWQ
Trigger: CTGCCAAAACCCGACTGATAAAATGCTCTCTGACTCAGAAAGCCAAGCCTTTGCTCTAACACCAGCATTGTGTAAGCTGCAGCTTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp ATGTTTGAAAATCAGATCGCCAGCAATGTGAATCTTCTCGGCCCCTaGAAACATATGTTCCATGGCCGGAAGAATGTGACCTCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: MFENQIASNVNLLGP*KHMFHGRKNVTSSA
Trigger: AGCACTGGAGGTCACATTCTTCCGGCCATGGAACATATGTTTTCAGGGGCCGAGAAGATTCACATTGCTGGCGATCTGATTTTCAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp TGTTGTATGAATTTGGGAAGTACCCTTTCTGGAGAAGACCCTGGGTaGTCTTCTGGAACGTTCTGTGGCAGGTGCATTAAAACCATACCT +
Preference number: 5 (lower is better)
Translates to: CCMNLGSTLSGEDPG*SSGTFCGRCIKTIP
Trigger: AGGTATGGTTTTAATGCACCTGCCACAGAACGTTCCAGAAGATCACCCAGGGTCTTCTCCAGAAAGGGTACTTCCCAAATTCATACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp ACTGTATGTAAAACATATTGGGGTAACCCAGTTGGCCTGCTCTTCTaGCCCGTCTTGTTTAGCTGTTCATCCTTTGAAACAGACACATCC +
Preference number: 5 (lower is better)
Translates to: TVCKTYWGNPVGLLF*PVLFSCSSFETDTS
Trigger: GGATGTGTCTGTTTCAAAGGATGAACAGCTAAACAAGACGGGCCAGAAGAGCAGGCCAACTGGGTTACCCCAATATGTTTTACATACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp GTCATTTCCTCTAATGTAGATTTGGAAGTCTCTCTATCTGGCAATTaGGAGACATCCTTACTTTCAGGGCTGTGGGAGAGACAGCATGGA +
Preference number: 5 (lower is better)
Translates to: VISSNVDLEVSLSGN*ETSLLSGLWERQHG
Trigger: TCCATGCTGTCTCTCCCACAGCCCTGAAAGTAAGGATGTCTCCCAATTGCCAGATAGAGAGACTTCCAAATCTACATTAGAGGAAATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 90 bp TCGTGTCCTATTGCTATACGAAGTCCAGCTTTCACTTTCGTAAGATaGAGGAAGCTCGGAAGAAGATTTGAATCTTCGATTGTACCCACT +
Preference number: 5 (lower is better)
Translates to: SCPIAIRSPAFTFVR*RKLGRRFESSIVPT
Trigger: AGTGGGTACAATCGAAGATTCAAATCTTCTTCCGAGCTTCCTGCATCTTACGAAAGTGAAAGCTGGACTTCGTATAGCAATAGGACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 90 bp GATACATTACTTGGGGAAATCTCTTTGGTCGTAGGTTCTTCTCTATaGAGAGAAACATCTGGTCCCACAGAAGTCATTTCCTCTAATGTA +
Preference number: 5 (lower is better)
Translates to: DTLLGEISLVVGSSL*RETSGPTEVISSNV
Trigger: TACATTAGAGGAAATGACTTCTGTGGGACCAGATGTTTCTCTTCATAGAGAAGAACCTACGACCAAAGAGATTTCCCCAAGTAATGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 90 bp GCAAAGGATGACCGAAAGCTCATTCGGGAAGAAACAGATGGTTTTTaGTTTATTAGGCTTTTAGATCTTGGTGTTTGTAATTCCATCGGA +
Preference number: 5 (lower is better)
Translates to: AKDDRKLIREETDGF*FIRLLDLGVCNSIG
Trigger: TCCGATGGAATTACAAACACCAAGATCTAAAAGCCTAATAAACCAAAAACCATCTGTTTCTTCCCGAATGAGCTTTCGGTCATCCTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp GGCAAGGCTGACCAGGAGGTCCAGGGCTGGATACTGTaGTCTCCTGGAGAAGGGTCTCAGACTTGTCCACAT +
Preference number: 6 (lower is better)
Translates to: GKADQEVQGWIL*SPGEGSQTCPH
Trigger: ATGTGGACAAGTCTGAGACCCTTCTCCAGGAGACCACAGTATCCAGCCCTGGACCTCCTGGTCAGCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp TGTATTTGTTTCCTGACTTCCTGCCTGGCTGGCTTCTaGCTGCAGACCTGCTCCCCCTGGCTGAGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: CICFLTSCLAGF*LQTCSPWLSLF
Trigger: GAAGAGGCTCAGCCAGGGGGAGCAGGTCTGCAGTCAGAAGCCAGCCAGGCAGGAAGTCAGGAAACAAATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp GGGCGGAGGCATACCGCTCTCCTCCCTCATGATGGCTaGCTTAGGAACAAACACACTGGCAACTGGTTGGTT +
Preference number: 6 (lower is better)
Translates to: GRRHTALLPHDG*LRNKHTGNWLV
Trigger: AACCAACCAGTTGCCAGTGTGTTTGTTCCTAAGCCAGCCATCATGAGGGAGGAGAGCGGTATGCCTCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TCTCTGCTGTATTTGTTTCCTGACTTCCTGCCTGGCTaGCTTCTGACTGCAGACCTGCTCCCCCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SLLYLFPDFLPG*LLTADLLPLAE
Trigger: CTCAGCCAGGGGGAGCAGGTCTGCAGTCAGAAGCCAGCCAGGCAGGAAGTCAGGAAACAAATACAGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp CAGGGCTGTGGGAGAGACAGCATGGAGCGGAGTCAACCTGCATCTTaGGGTCTTGTGGTGGAGGTATTCCTGATTGCACTTGTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: QGCGRDSMERSQPAS*GLVVEVFLIALVQD
Trigger: GTCCTGCACAAGTGCAATCAGGAATACCTCCACCACAAGACCCAAAGATGCAGGTTGACTCCGCTCCATGCTGTCTCTCCCACAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp TGCAAAGTAGCTGTGGAATCCGGGAAGCTGGAACTCTaGGACTCCCTTCCGTCATCAGGGCTGAGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: CKVAVESGKLEL*DSLPSSGLRGK
Trigger: CTTCCCTCTCAGCCCTGATGACGGAAGGGAGTCTCAGAGTTCCAGCTTCCCGGATTCCACAGCTACTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp GTACTCGTCGTCTGTGGTTGTGTCTGTGTCCCAGTCTaGGACCAGTGGCTCCACTGGGTCGTCCTTGTAGAT +
Preference number: 6 (lower is better)
Translates to: VLVVCGCVCVPV*DQWLHWVVLVD
Trigger: ATCTACAAGGACGACCCAGTGGAGCCACTGGTCTCAGACTGGGACACAGACACAACCACAGACGACGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 72 bp GGGCTGTGGGAGAGACAGCATGGAGCGGAGTCAACCTaGATCTTTGGGTCTTGTGGTGGAGGTATTCCTGAT +
Preference number: 6 (lower is better)
Translates to: GLWERQHGAEST*IFGSCGGGIPD
Trigger: ATCAGGAATACCTCCACCACAAGACCCAAAGATGCAGGTTGACTCCGCTCCATGCTGTCTCTCCCACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TCTTCCCTTCCCCCTCCCATTCTTGAAGGGAGAGTATaGGTGGCAGTGAACAGCATCGTGTGGAAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: SSLPPPILEGRV*VAVNSIVWKCR
Trigger: CCTGCACTTCCACACGATGCTGTTCACTGCCACCCATACTCTCCCTTCAAGAATGGGAGGGGGAAGGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp ACTTTTGATGGCAAGGCTGACCAGGAGGTCCAGGGCTaGATACTGTGGTCTCCTGGAGAAGGGTCTCAGACT +
Preference number: 6 (lower is better)
Translates to: TFDGKADQEVQG*ILWSPGEGSQT
Trigger: AGTCTGAGACCCTTCTCCAGGAGACCACAGTATCCAGCCCTGGACCTCCTGGTCAGCCTTGCCATCAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp CTACCTTCTCTTGTGGGTGCCGCTGCACGCTCTGTTTaGGTTAGCTTCTCAATACAGGACACGCGGCGCCTA +
Preference number: 6 (lower is better)
Translates to: LPSLVGAAARSV*VSFSIQDTRRL
Trigger: TAGGCGCCGCGTGTCCTGTATTGAGAAGCTAACCAAAACAGAGCGTGCAGCGGCACCCACAAGAGAAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp TCAGCCAAGCTACATGGCTCCCCCGAAGGACACGAGATTGCCCTCTaGATGAGGAAAGGGAGTGGCCCTTTCCTAACCGAAGCAGATCTA +
Preference number: 6 (lower is better)
Translates to: SAKLHGSPEGHEIAL*MRKGSGPFLTEADL
Trigger: TAGATCTGCTTCGGTTAGGAAAGGGCCACTCCCTTTCCTCATCAAGAGGGCAATCTCGTGTCCTTCGGGGGAGCCATGTAGCTTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp GGTCCAGGGCTGGATACTGTGGTCTCCTGGAGAAGGGTCTCAGACTaGTCCACATTCATCTGGCTGCTTTCATCTGTGGACTCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: GPGLDTVVSWRRVSD*STFIWLLSSVDSVA
Trigger: AGCCACAGAGTCCACAGATGAAAGCAGCCAGATGAATGTGGACAAGTCTGAGACCCTTCTCCAGGAGACCACAGTATCCAGCCCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp GCCCCTGAAAACATATGTTCCATGGCCGGAAGAATGTaGCCTCCAGTGCTGAGAAGGGACACCTTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: APENICSMAGRM*PPVLRRDTLAA
Trigger: TGCAGCCAAGGTGTCCCTTCTCAGCACTGGAGGTCACATTCTTCCGGCCATGGAACATATGTTTTCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp GACCTACTAGAACGGTCACCTACAACCGCAGCCATGTaGTCCCTCCAAGGATACTGTCCATTTCCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: DLLERSPTTAAM*SLQGYCPFPEA
Trigger: GGCCTCTGGAAATGGACAGTATCCTTGGAGGGATCACATGGCTGCGGTTGTAGGTGACCGTTCTAGTAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TTTGGGCTGGGAAGAGATGTCGCTGTTCCACTTTCTTaGATGAAAGGCGGGGACGCTGCTGAGTCAAGTGTC +
Preference number: 6 (lower is better)
Translates to: FGLGRDVAVPLS*MKGGDAAESSV
Trigger: GACACTTGACTCAGCAGCGTCCCCGCCTTTCATCCAAGAAAGTGGAACAGCGACATCTCTTCCCAGCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TCTGGCAATTGGGAGACATCCTTACTTTCAGGGCTGTaGGAGAGACAGCATGGAGCGGAGTCAACCTGCATC +
Preference number: 6 (lower is better)
Translates to: SGNWETSLLSGL*ERQHGAESTCI
Trigger: GATGCAGGTTGACTCCGCTCCATGCTGTCTCTCCCACAGCCCTGAAAGTAAGGATGTCTCCCAATTGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp CACTGGGTCGTCCTTGTAGATGTTAAGCGGCTCACTTaGAAATACACCATCTTCTGGCGCCTGACCTGCTGG +
Preference number: 6 (lower is better)
Translates to: HWVVLVDVKRLT*KYTIFWRLTCW
Trigger: CCAGCAGGTCAGGCGCCAGAAGATGGTGTATTTCCAAGTGAGCCGCTTAACATCTACAAGGACGACCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp TGCTTCTTTGGTCCTCAGCACAGCCACTACCTTCTCTaGTGGGTGCCGCTGCACGCTCTGTTTTGGTTAGCT +
Preference number: 6 (lower is better)
Translates to: CFFGPQHSHYLL*WVPLHALFWLA
Trigger: AGCTAACCAAAACAGAGCGTGCAGCGGCACCCACAAGAGAAGGTAGTGGCTGTGCTGAGGACCAAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp GACTGGGATGTTGGGCTGGGTGTCAGTAAGAGACAGTaGGTCAGTAGAATGGCTACAGGCCACAGGAACTTC +
Preference number: 6 (lower is better)
Translates to: DWDVGLGVSKRQ*VSRMATGHRNF
Trigger: GAAGTTCCTGTGGCCTGTAGCCATTCTACTGACTCACTGTCTCTTACTGACACCCAGCCCAACATCCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp GGGTGTCCCCGAGACTGCATTTGCAGCATCACTTACTaGTTCAGGAGAGCTGGGCTTGTCAGATGTGCTCTT +
Preference number: 6 (lower is better)
Translates to: GCPRDCICSITY*FRRAGLVRCAL
Trigger: AAGAGCACATCTGACAAGCCCAGCTCTCCTGAATCAGTAAGTGATGCTGCAAATGCAGTCTCGGGGACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp AGCGGCTCACTTGGAAATACACCATCTTCTGGCGCCTaGCCTGCTGGAGAATTTACCAGCTCTGACTGTGAC +
Preference number: 6 (lower is better)
Translates to: SGSLGNTPSSGA*PAGEFTSSDCD
Trigger: GTCACAGTCAGAGCTGGTAAATTCTCCAGCAGGTCAGGCGCCAGAAGATGGTGTATTTCCAAGTGAGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 72 bp TCCCTCCAGGCCTGGGTATTACAGGAGAAGCATCCATaGCCAGGACTGATGACTTCTGTCTGTCATCGCTTT +
Preference number: 6 (lower is better)
Translates to: SLQAWVLQEKHP*PGLMTSVCHRF
Trigger: AAAGCGATGACAGACAGAAGTCATCAGTCCTGGGCATGGATGCTTCTCCTGTAATACCCAGGCCTGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 72 bp GATCCCTCCAAGGATACTGTCCATTTCCAGAGGCCATaGCACCTGCACATGTCCCAGAATCTCTTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: DPSKDTVHFQRP*HLHMSQNLFWS
Trigger: AGACCAGAAGAGATTCTGGGACATGTGCAGGTGGCATGGCCTCTGGAAATGGACAGTATCCTTGGAGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TTCTTTGGTCCTCAGCACAGCCACTACCTTCTCTTGTaGGTGCCGCTGCACGCTCTGTTTTGGTTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: FFGPQHSHYLLL*VPLHALFWLAS
Trigger: AGAAGCTAACCAAAACAGAGCGTGCAGCGGCACCCACAAGAGAAGGTAGTGGCTGTGCTGAGGACCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp TCTTCTTGGTGGCTTTGGGTGTCCCCGAGACTGCATTaGCAGCATCACTTACTGATTCAGGAGAGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SSWWLWVSPRLH*QHHLLIQESWA
Trigger: AGCCCAGCTCTCCTGAATCAGTAAGTGATGCTGCAAATGCAGTCTCGGGGACACCCAAAGCCACCAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp CTGACTCTTTATCCTTTTCATCCAGGTAGTACTCGTCGTCTGTGGTaGTGTCTGTGTCCCAGTCTGAGACCAGTGGCTCCACTGGGTCGT +
Preference number: 6 (lower is better)
Translates to: LTLYPFHPGSTRRLW*CLCPSLRPVAPLGR
Trigger: ACGACCCAGTGGAGCCACTGGTCTCAGACTGGGACACAGACACAACCACAGACGACGAGTACTACCTGGATGAAAAGGATAAAGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp ACAGATGGCGCCCTGTTTGCTTCAACAGAGAACATTTCAAAGTCCTaGTCAGAAGAAGGGAATGGGCCCCTGCTCTGGGGAAAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: TDGALFASTENISKS*SEEGNGPLLWGKSD
Trigger: GTCTGACTTTCCCCAGAGCAGGGGCCCATTCCCTTCTTCTGACAAGGACTTTGAAATGTTCTCTGTTGAAGCAAACAGGGCGCCATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp TCCGTCATCAGGGCTGAGAGGGAAGGGAGTTCTGAATaGAGATGCTGGAGTCTGAGCCTTGCCACACAAATA +
Preference number: 6 (lower is better)
Translates to: SVIRAEREGSSE*RCWSLSLATQI
Trigger: TATTTGTGTGGCAAGGCTCAGACTCCAGCATCTTCATTCAGAACTCCCTTCCCTCTCAGCCCTGATGACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 72 bp CCAAGGATACTGTCCATTTCCAGAGGCCATGCCACCTaGACATGTCCCAGAATCTCTTCTGGTCTGGGAATT +
Preference number: 6 (lower is better)
Translates to: PRILSISRGHAT*TCPRISSGLGI
Trigger: AATTCCCAGACCAGAAGAGATTCTGGGACATGTGCAGGTGGCATGGCCTCTGGAAATGGACAGTATCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TCTGCCCTCCGGAGTTCCTCATTTCTTTCCAGTACCTaGAGGATCTTCCTGGCTTCTTCCTCGTTTAGGAAG +
Preference number: 6 (lower is better)
Translates to: SALRSSSFLSST*RIFLASSSFRK
Trigger: CTTCCTAAACGAGGAAGAAGCCAGGAAGATCCTCCAGGTACTGGAAAGAAATGAGGAACTCCGGAGGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TCCTGGGCCAGCTTGTTGTCCAAATCGTCTAAAACTTaGAAAAACTCACTCTCCAGCAGGGAAGCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SWASLLSKSSKT*KNSLSSREASQ
Trigger: CTGGGACGCTTCCCTGCTGGAGAGTGAGTTTTTCCAAGTTTTAGACGATTTGGACAACAAGCTGGCCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp AGAGAACATTTCAAAGTCCTTGTCAGAAGAAGGGAATaGGCCCCTGCTCTGGGGAAAGTCAGACCAGGACGA +
Preference number: 6 (lower is better)
Translates to: REHFKVLVRRRE*APALGKVRPGR
Trigger: TCGTCCTGGTCTGACTTTCCCCAGAGCAGGGGCCCATTCCCTTCTTCTGACAAGGACTTTGAAATGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp GTGGAAGGTACCAGACGAGCATCAAGGAAAGACTCTTaGGGTGCATCTGATGCCACATGTAAAGGAGCTCGT +
Preference number: 6 (lower is better)
Translates to: VEGTRRASRKDS*GASDATCKGAR
Trigger: ACGAGCTCCTTTACATGTGGCATCAGATGCACCCCAAGAGTCTTTCCTTGATGCTCGTCTGGTACCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp CATCTTCGAGGGACAGTTGACTCAGAGCATTGTCAATaGAAGTGTTTTCTGAGAAGTGGCGCCCCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: HLRGTVDSEHCQ*KCFLRSGAPWL
Trigger: AAGCCAGGGGGCGCCACTTCTCAGAAAACACTTCCATTGACAATGCTCTGAGTCAACTGTCCCTCGAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp GGGGGCCCGAAGCTCACGATCCTTTCCAGTGTGTTCTaGAGCAAGTTCCTTTTCAGAGAAAGCACTCTCTCT +
Preference number: 6 (lower is better)
Translates to: GGPKLTILSSVF*SKFLFRESTLS
Trigger: AGAGAGAGTGCTTTCTCTGAAAAGGAACTTGCTCAAGAACACACTGGAAAGGATCGTGAGCTTCGGGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp CTGGATACTGTGGTCTCCTGGAGAAGGGTCTCAGACTaGTCCACATTCATCTGGCTGCTTTCATCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: LDTVVSWRRVSD*STFIWLLSSVD
Trigger: GTCCACAGATGAAAGCAGCCAGATGAATGTGGACAAGTCTGAGACCCTTCTCCAGGAGACCACAGTATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp TATCCTTTTCATCCAGGTAGTACTCGTCGTCTGTGGTaGTGTCTGTGTCCCAGTCTGAGACCAGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: YPFHPGSTRRLW*CLCPSLRPVAP
Trigger: TGGAGCCACTGGTCTCAGACTGGGACACAGACACAACCACAGACGACGAGTACTACCTGGATGAAAAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp TATCTGTCATCTTCTTGGTGGCTTTGGGTGTCCCCGAGACTGCATTaGCAGCATCACTTACTGATTCAGGAGAGCTGGGCTTGTCAGATG +
Preference number: 6 (lower is better)
Translates to: YLSSSWWLWVSPRLH*QHHLLIQESWACQM
Trigger: CATCTGACAAGCCCAGCTCTCCTGAATCAGTAAGTGATGCTGCAAATGCAGTCTCGGGGACACCCAAAGCCACCAAGAAGATGACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp CTGTGCCCGGGGGCCAGCTTGCTGTCATTGGTAGAATaGGTGGAAAGACTTTGCTCAAGATCTAAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: LCPGASLLSLVE*VERLCSRSKRA
Trigger: TGCTCTTTTAGATCTTGAGCAAAGTCTTTCCACTCATTCTACCAATGACAGCAAGCTGGCCCCCGGGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp GAAGCAACCGTTCCCTTACTTTCCTGCTGTCTGCTGTaGATGAGAAAGCTGGCTGGTTTTCTTGGCAAGGTG +
Preference number: 6 (lower is better)
Translates to: EATVPLLSCCLL*MRKLAGFLGKV
Trigger: CACCTTGCCAAGAAAACCAGCCAGCTTTCTCATTCACAGCAGACAGCAGGAAAGTAAGGGAACGGTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp TCTTCAACCTTCCTCATCTCTGCTGTATTTGTTTCCTaGCTTCCTGCCTGGCTGGCTTCTGACTGCAGACCT +
Preference number: 6 (lower is better)
Translates to: SSTFLISAVFVS*LPAWLASDCRP
Trigger: AGGTCTGCAGTCAGAAGCCAGCCAGGCAGGAAGTCAGGAAACAAATACAGCAGAGATGAGGAAGGTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp CCAGTGCTGAGAAGGGACACCTTGGCTGCAAACAGATaGCGCCCTGTTTGCTTCAACAGAGAACATTTCAAA +
Preference number: 6 (lower is better)
Translates to: PVLRRDTLAANR*RPVCFNREHFK
Trigger: TTTGAAATGTTCTCTGTTGAAGCAAACAGGGCGCCATCTGTTTGCAGCCAAGGTGTCCCTTCTCAGCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TTCTCACTGTTCGTCTCTGTGACTGGGATGTTGGGCTaGGTGTCAGTAAGAGACAGTGAGTCAGTAGAATGG +
Preference number: 6 (lower is better)
Translates to: FSLFVSVTGMLG*VSVRDSESVEW
Trigger: CCATTCTACTGACTCACTGTCTCTTACTGACACCCAGCCCAACATCCCAGTCACAGAGACGAACAGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp CTTTATCCTTTTCATCCAGGTAGTACTCGTCGTCTGTaGTTGTGTCTGTGTCCCAGTCTGAGACCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LYPFHPGSTRRL*LCLCPSLRPVA
Trigger: AGCCACTGGTCTCAGACTGGGACACAGACACAACCACAGACGACGAGTACTACCTGGATGAAAAGGATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp CAACTGGTTGGTTCCCAACAGGTGAATTGTATATTTTaGCCGAAGCTGTCCCCCTCACAGACGCTGAAGGTC +
Preference number: 6 (lower is better)
Translates to: QLVGSQQVNCIF*PKLSPSQTLKV
Trigger: GACCTTCAGCGTCTGTGAGGGGGACAGCTTCGGCAAAAATATACAATTCACCTGTTGGGAACCAACCAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp GATGCAGGAAGCTCGGAAGAAGATTTGAATCTTCGATaGTACCCACTGTTGGGGAAGGAGCCATCTTCGAGG +
Preference number: 6 (lower is better)
Translates to: DAGSSEEDLNLR*YPLLGKEPSSR
Trigger: CCTCGAAGATGGCTCCTTCCCCAACAGTGGGTACAATCGAAGATTCAAATCTTCTTCCGAGCTTCCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp AGTGCTGAGAAGGGACACCTTGGCTGCAAACAGATGGCGCCCTGTTaGCTTCAACAGAGAACATTTCAAAGTCCTTGTCAGAAGAAGGGA +
Preference number: 6 (lower is better)
Translates to: SAEKGHLGCKQMAPC*LQQRTFQSPCQKKG
Trigger: TCCCTTCTTCTGACAAGGACTTTGAAATGTTCTCTGTTGAAGCAAACAGGGCGCCATCTGTTTGCAGCCAAGGTGTCCCTTCTCAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp AGCACAGAGATGCACTCCCAAATGCATTCTTTTGCATaGAGTCTTCCTTTAAGACTCTGGGCTCCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: STEMHSQMHSFA*SLPLRLWAPWS
Trigger: GGACCAGGGAGCCCAGAGTCTTAAAGGAAGACTTCATGCAAAAGAATGCATTTGGGAGTGCATCTCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp AATCAGATCGCCAGCAATGTGAATCTTCTCGGCCCCTaGAAACATATGTTCCATGGCCGGAAGAATGTGACC +
Preference number: 6 (lower is better)
Translates to: NQIASNVNLLGP*KHMFHGRKNVT
Trigger: GGTCACATTCTTCCGGCCATGGAACATATGTTTTCAGGGGCCGAGAAGATTCACATTGCTGGCGATCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp ACATGTGAGGTGTCCATGCTCTCCAGTGGGGATGTTTaGAAATCAGATCGCCAGCAATGTGAATCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: TCEVSMLSSGDV*KSDRQQCESSR
Trigger: CCGAGAAGATTCACATTGCTGGCGATCTGATTTTCAAACATCCCCACTGGAGAGCATGGACACCTCACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp AAGTGCTTCAGTCTCTCCCTGGAAAGCATCTCTAAGTaGATCGGTACCTTGTGTGTACTGCTGAAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: KCFSLSLESISK*IGTLCVLLKEA
Trigger: AGCCTCCTTCAGCAGTACACACAAGGTACCGATTCACTTAGAGATGCTTTCCAGGGAGAGACTGAAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 72 bp AGGGACACCTTGGCTGCAAACAGATGGCGCCCTGTTTaGTTCAACAGAGAACATTTCAAAGTCCTTGTCAGA +
Preference number: 6 (lower is better)
Translates to: RDTLAANRWRPV*FNREHFKVLVR
Trigger: TCTGACAAGGACTTTGAAATGTTCTCTGTTGAAGCAAACAGGGCGCCATCTGTTTGCAGCCAAGGTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp GGCACTCTGGTATTCATCAAGCCTGAAGACTGTTCCTaGGCCAGCTTGTTGTCCAAATCGTCTAAAACTTGG +
Preference number: 6 (lower is better)
Translates to: GTLVFIKPEDCS*ASLLSKSSKTW
Trigger: CCAAGTTTTAGACGATTTGGACAACAAGCTGGCCCAGGAACAGTCTTCAGGCTTGATGAATACCAGAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TATGAATTTGGGAAGTACCCTTTCTGGAGAAGACCCTaGGTGATCTTCTGGAACGTTCTGTGGCAGGTGCAT +
Preference number: 6 (lower is better)
Translates to: YEFGKYPFWRRP*VIFWNVLWQVH
Trigger: ATGCACCTGCCACAGAACGTTCCAGAAGATCACCCAGGGTCTTCTCCAGAAAGGGTACTTCCCAAATTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp ACTTTCCTGCTGTCTGCTGTGAATGAGAAAGCTGGCTaGTTTTCTTGGCAAGGTGCAATAGACTGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: TFLLSAVNEKAG*FSWQGAIDCAE
Trigger: CTCAGCACAGTCTATTGCACCTTGCCAAGAAAACCAGCCAGCTTTCTCATTCACAGCAGACAGCAGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp ATGCCACCTGCACATGTCCCAGAATCTCTTCTGGTCTaGGAATTTTCATCATTATCTTCTGAGCGGGATGGG +
Preference number: 6 (lower is better)
Translates to: MPPAHVPESLLV*EFSSLSSERDG
Trigger: CCCATCCCGCTCAGAAGATAATGATGAAAATTCCCAGACCAGAAGAGATTCTGGGACATGTGCAGGTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp AAGGGACACCTTGGCTGCAAACAGATGGCGCCCTGTTaGCTTCAACAGAGAACATTTCAAAGTCCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: KGHLGCKQMAPC*LQQRTFQSPCQ
Trigger: CTGACAAGGACTTTGAAATGTTCTCTGTTGAAGCAAACAGGGCGCCATCTGTTTGCAGCCAAGGTGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp CTTGGCTTCCATAATCTTCCCTGTGTGAGTGAGCGTTaGACGTTCTCCAAGAAAGCCAACTGCTGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: LGFHNLPCVSER*TFSKKANCCSF
Trigger: GAAAGAGCAGCAGTTGGCTTTCTTGGAGAACGTCAAACGCTCACTCACACAGGGAAGATTATGGAAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp GGCACTCTGGTATTCATCAAGCCTGAAGACTGTTCCTGGGCCAGCTaGTTGTCCAAATCGTCTAAAACTTGGAAAAACTCACTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GTLVFIKPEDCSWAS*LSKSSKTWKNSLSS
Trigger: GCTGGAGAGTGAGTTTTTCCAAGTTTTAGACGATTTGGACAACAAGCTGGCCCAGGAACAGTCTTCAGGCTTGATGAATACCAGAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp TCAACATGTGTTCTTCATCTTCAACCTTCCTCATCTCTGCTGTATTaGTTTCCTGACTTCCTGCCTGGCTGGCTTCTGACTGCAGACCTG +
Preference number: 6 (lower is better)
Translates to: STCVLHLQPSSSLLY*FPDFLPGWLLTADL
Trigger: CAGGTCTGCAGTCAGAAGCCAGCCAGGCAGGAAGTCAGGAAACAAATACAGCAGAGATGAGGAAGGTTGAAGATGAAGAACACATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp ACTCTGGTATTCATCAAGCCTGAAGACTGTTCCTGGGCCAGCTTGTaGTCCAAATCGTCTAAAACTTGGAAAAACTCACTCTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: TLVFIKPEDCSWASL*SKSSKTWKNSLSSR
Trigger: CCTGCTGGAGAGTGAGTTTTTCCAAGTTTTAGACGATTTGGACAACAAGCTGGCCCAGGAACAGTCTTCAGGCTTGATGAATACCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp TTCCTAACCGAAGCAGATCTAATGGCTTTCATATCTGTCATCTTCTaGGTGGCTTTGGGTGTCCCCGAGACTGCATTTGCAGCATCACTT +
Preference number: 6 (lower is better)
Translates to: FLTEADLMAFISVIF*VALGVPETAFAASL
Trigger: AAGTGATGCTGCAAATGCAGTCTCGGGGACACCCAAAGCCACCAAGAAGATGACAGATATGAAAGCCATTAGATCTGCTTCGGTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp AGGTTGGAAGCATTAAGAACATCATCCTTGAGGAAGCCAGGGTTCTaGAGGAAACTTGGCTTCCATAATCTTCCCTGTGTGAGTGAGCGT +
Preference number: 6 (lower is better)
Translates to: RLEALRTSSLRKPGF*RKLGFHNLPCVSER
Trigger: ACGCTCACTCACACAGGGAAGATTATGGAAGCCAAGTTTCCTCAAGAACCCTGGCTTCCTCAAGGATGATGTTCTTAATGCTTCCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp GAGACTGAAGTTTTAGAGTCTCCTTCGCAGGTCGTCTaGATGAGAACAGTGAAGCAAAGGATGACCGAAAGC +
Preference number: 6 (lower is better)
Translates to: ETEVLESPSQVV*MRTVKQRMTES
Trigger: GCTTTCGGTCATCCTTTGCTTCACTGTTCTCATTCAGACGACCTGCGAAGGAGACTCTAAAACTTCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp AATTTGGGAAGTACCCTTTCTGGAGAAGACCCTGGGTaGTCTTCTGGAACGTTCTGTGGCAGGTGCATTAAA +
Preference number: 6 (lower is better)
Translates to: NLGSTLSGEDPG*SSGTFCGRCIK
Trigger: TTTAATGCACCTGCCACAGAACGTTCCAGAAGATCACCCAGGGTCTTCTCCAGAAAGGGTACTTCCCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 72 bp CTGTATGTAAAACATATTGGGGTAACCCAGTTGGCCTaGTCTTCTGGCCCGTCTTGTTTAGCTGTTCATCCT +
Preference number: 6 (lower is better)
Translates to: LYVKHIGVTQLA*SSGPSCLAVHP
Trigger: AGGATGAACAGCTAAACAAGACGGGCCAGAAGAGCAGGCCAACTGGGTTACCCCAATATGTTTTACATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TCTAAAAGAGCAGGCTCCCTGGAAGGCTGTGATTTTTaGTTAGCAGTGGACTCAAAGCACCAATGGCTGTTT +
Preference number: 6 (lower is better)
Translates to: SKRAGSLEGCDF*LAVDSKHQWLF
Trigger: AAACAGCCATTGGTGCTTTGAGTCCACTGCTAACCAAAAATCACAGCCTTCCAGGGAGCCTGCTCTTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp TGCAGCTTACACAATGCTGGTGTTAGAGCAAAGGCTTaGCTTTCTGAGTCAGAGAGCATTTTATCAGTCGGG +
Preference number: 6 (lower is better)
Translates to: CSLHNAGVRAKA*LSESESILSVG
Trigger: CCCGACTGATAAAATGCTCTCTGACTCAGAAAGCCAAGCCTTTGCTCTAACACCAGCATTGTGTAAGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp ATATCTTTCTCACTGTTCGTCTCTGTGACTGGGATGTaGGGCTGGGTGTCAGTAAGAGACAGTGAGTCAGTA +
Preference number: 6 (lower is better)
Translates to: ISFSLFVSVTGM*GWVSVRDSESV
Trigger: TACTGACTCACTGTCTCTTACTGACACCCAGCCCAACATCCCAGTCACAGAGACGAACAGTGAGAAAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp CTAATGGCTTTCATATCTGTCATCTTCTTGGTGGCTTaGGGTGTCCCCGAGACTGCATTTGCAGCATCACTT +
Preference number: 6 (lower is better)
Translates to: LMAFISVIFLVA*GVPETAFAASL
Trigger: AAGTGATGCTGCAAATGCAGTCTCGGGGACACCCAAAGCCACCAAGAAGATGACAGATATGAAAGCCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp GAAGCAGATCTAATGGCTTTCATATCTGTCATCTTCTaGGTGGCTTTGGGTGTCCCCGAGACTGCATTTGCA +
Preference number: 6 (lower is better)
Translates to: EADLMAFISVIF*VALGVPETAFA
Trigger: TGCAAATGCAGTCTCGGGGACACCCAAAGCCACCAAGAAGATGACAGATATGAAAGCCATTAGATCTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp GTTCTTCATCTTCAACCTTCCTCATCTCTGCTGTATTaGTTTCCTGACTTCCTGCCTGGCTGGCTTCTGACT +
Preference number: 6 (lower is better)
Translates to: VLHLQPSSSLLY*FPDFLPGWLLT
Trigger: AGTCAGAAGCCAGCCAGGCAGGAAGTCAGGAAACAAATACAGCAGAGATGAGGAAGGTTGAAGATGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp GAAGCAGATCTAATGGCTTTCATATCTGTCATCTTCTTGGTGGCTTaGGGTGTCCCCGAGACTGCATTTGCAGCATCACTTACTGATTCA +
Preference number: 6 (lower is better)
Translates to: EADLMAFISVIFLVA*GVPETAFAASLTDS
Trigger: TGAATCAGTAAGTGATGCTGCAAATGCAGTCTCGGGGACACCCAAAGCCACCAAGAAGATGACAGATATGAAAGCCATTAGATCTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp ATGTCCATTGGTGCTTGTACCCCCAGTGACTCTTCTTaGTTCTGCCTATGTCTAGAAGCATCTGACCTATTC +
Preference number: 6 (lower is better)
Translates to: MSIGACTPSDSS*FCLCLEASDLF
Trigger: GAATAGGTCAGATGCTTCTAGACATAGGCAGAATCAAGAAGAGTCACTGGGGGTACAAGCACCAATGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp CCCAAAAATTCCATAGTCAATAGGCCTGGAAATGGATaGGGTGGACTTGGGACCTCGTGTCCTATTGCTATA +
Preference number: 6 (lower is better)
Translates to: PKNSIVNRPGNG*GGLGTSCPIAI
Trigger: TATAGCAATAGGACACGAGGTCCCAAGTCCACCTCATCCATTTCCAGGCCTATTGACTATGGAATTTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp CTCTTTGTGTTGTATGAATTTGGGAAGTACCCTTTCTaGAGAAGACCCTGGGTGATCTTCTGGAACGTTCTG +
Preference number: 6 (lower is better)
Translates to: LFVLYEFGKYPF*RRPWVIFWNVL
Trigger: CAGAACGTTCCAGAAGATCACCCAGGGTCTTCTCCAGAAAGGGTACTTCCCAAATTCATACAACACAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp AGAGAGAGCCTCCTAAAGCCAGATTCGCTTTCACTTTaGGAGAAGATAGTAGCTACGTGTTTTCTGGGACTT +
Preference number: 6 (lower is better)
Translates to: RESLLKPDSLSL*EKIVATCFLGL
Trigger: AAGTCCCAGAAAACACGTAGCTACTATCTTCTCCCAAAGTGAAAGCGAATCTGGCTTTAGGAGGCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp GATAGACATGTTGGAAGTTTCACTGTGGTAGTTCTGTaGCCTTCCTGTGCTATGACCATGACTGTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: DRHVGSFTVVVL*PSCAMTMTVPV
Trigger: CACAGGAACAGTCATGGTCATAGCACAGGAAGGCAACAGAACTACCACAGTGAAACTTCCAACATGTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp AGATCACTGTATGTAAAACATATTGGGGTAACCCAGTaGGCCTGCTCTTCTGGCCCGTCTTGTTTAGCTGTT +
Preference number: 6 (lower is better)
Translates to: RSLYVKHIGVTQ*ACSSGPSCLAV
Trigger: AACAGCTAAACAAGACGGGCCAGAAGAGCAGGCCAACTGGGTTACCCCAATATGTTTTACATACAGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp TTGAGGAAACTTGGCTTCCATAATCTTCCCTGTGTGAGTGAGCGTTaGACGTTCTCCAAGAAAGCCAACTGCTGCTCTTTCCCAAAAATT +
Preference number: 6 (lower is better)
Translates to: LRKLGFHNLPCVSER*TFSKKANCCSFPKI
Trigger: AATTTTTGGGAAAGAGCAGCAGTTGGCTTTCTTGGAGAACGTCAAACGCTCACTCACACAGGGAAGATTATGGAAGCCAAGTTTCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp TGCTGGTGTCTCACTGGTGTAAAACTACTCTTGTTTTaGGTATCGGCTGGAAAGTGTAAACTCCTAGCAGTG +
Preference number: 6 (lower is better)
Translates to: CWCLTGVKLLLF*VSAGKCKLLAV
Trigger: CACTGCTAGGAGTTTACACTTTCCAGCCGATACTCAAAACAAGAGTAGTTTTACACCAGTGAGACACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp ATGGCTGGCTTAGGAACAAACACACTGGCAACTGGTTaGTTCCCAACAGGTGAATTGTATATTTTTGCCGAA +
Preference number: 6 (lower is better)
Translates to: MAGLGTNTLATG*FPTGELYIFAE
Trigger: TTCGGCAAAAATATACAATTCACCTGTTGGGAACCAACCAGTTGCCAGTGTGTTTGTTCCTAAGCCAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp GATGTTATAGATAGACATGTTGGAAGTTTCACTGTGGTAGTTCTGTaGCCTTCCTGTGCTATGACCATGACTGTTCCTGTGAGACAGCTT +
Preference number: 6 (lower is better)
Translates to: DVIDRHVGSFTVVVL*PSCAMTMTVPVRQL
Trigger: AAGCTGTCTCACAGGAACAGTCATGGTCATAGCACAGGAAGGCAACAGAACTACCACAGTGAAACTTCCAACATGTCTATCTATAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp ACAGGAACTTCCGTACAGTTTCTTATTGGAAGAAAGTCTGGCTTATaGGGGATTATTTTCTGCAAAGTAGCTGTGGAATCCGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: TGTSVQFLIGRKSGL*GIIFCKVAVESGKL
Trigger: CAGCTTCCCGGATTCCACAGCTACTTTGCAGAAAATAATCCCCAATAAGCCAGACTTTCTTCCAATAAGAAACTGTACGGAAGTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS TCA 72 bp TGGCTCTCTTGGTTGTCTGTAGAATTTACAGCCAGCTaGTTATCTTGGCTCTTGGTAGCTTTGTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: WLSWLSVEFTAS*LSWLLVALSFS
Trigger: AGAGAAAGACAAAGCTACCAAGAGCCAAGATAATCAGCTGGCTGTAAATTCTACAGACAACCAAGAGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp GCTACAGGCCACAGGAACTTCCGTACAGTTTCTTATTaGAAGAAAGTCTGGCTTATTGGGGATTATTTTCTG +
Preference number: 6 (lower is better)
Translates to: ATGHRNFRTVSY*KKVWLIGDYFL
Trigger: CAGAAAATAATCCCCAATAAGCCAGACTTTCTTCCAATAAGAAACTGTACGGAAGTTCCTGTGGCCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp AAGTTCCTTTTCAGAGAAAGCACTCTCTCTAAACGATaGTTCACCTTCCAGAGAGTTAAAGATTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: KFLFRESTLSKR*FTFQRVKDSPS
Trigger: GGAGGGAGAATCTTTAACTCTCTGGAAGGTGAACCATCGTTTAGAGAGAGTGCTTTCTCTGAAAAGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CCA 72 bp ATTTCTAAAGCATTAGGAAGTGCTTCAGTCTCTCCCTaGAAAGCATCTCTAAGTGAATCGGTACCTTGTGTG +
Preference number: 6 (lower is better)
Translates to: ISKALGSASVSP*KASLSESVPCV
Trigger: CACACAAGGTACCGATTCACTTAGAGATGCTTTCCAGGGAGAGACTGAAGCACTTCCTAATGCTTTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp GGCTACAGGCCACAGGAACTTCCGTACAGTTTCTTATaGGAAGAAAGTCTGGCTTATTGGGGATTATTTTCT +
Preference number: 6 (lower is better)
Translates to: GYRPQELPYSFL*EESLAYWGLFS
Trigger: AGAAAATAATCCCCAATAAGCCAGACTTTCTTCCAATAAGAAACTGTACGGAAGTTCCTGTGGCCTGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp GAAGCATCTGACCTATTCCATATGATGGAAGATAAAGGAGTCCTTTaGGGGCTTTGCTGGTGTCTCACTGGTGTAAAACTACTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: EASDLFHMMEDKGVL*GLCWCLTGVKLLLF
Trigger: AAACAAGAGTAGTTTTACACCAGTGAGACACCAGCAAAGCCCCAAAAGGACTCCTTTATCTTCCATCATATGGAATAGGTCAGATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp ATGGCTCTCTTGGTTGTCTGTAGAATTTACAGCCAGCTGATTATCTaGGCTCTTGGTAGCTTTGTCTTTCTCTTCTCTTTGTTCTTGACC +
Preference number: 6 (lower is better)
Translates to: MALLVVCRIYSQLII*ALGSFVFLFSLFLT
Trigger: GGTCAAGAACAAAGAGAAGAGAAAGACAAAGCTACCAAGAGCCAAGATAATCAGCTGGCTGTAAATTCTACAGACAACCAAGAGAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp GTAGCTACGTGTTTTCTGGGACTTAAATCCTTAGCTGGGATTCTTTaGCTTGCTTTAGATATGGCTGCCAATCTGTGTTTACCTGAGTAT +
Preference number: 6 (lower is better)
Translates to: VATCFLGLKSLAGIL*LALDMAANLCLPEY
Trigger: ATACTCAGGTAAACACAGATTGGCAGCCATATCTAAAGCAAGCAAAAGAATCCCAGCTAAGGATTTAAGTCCCAGAAAACACGTAGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp CAAAACACTTATTTTTGCTCAGTTTGTTGCTTTGATCTCTTTGTGTaGTATGAATTTGGGAAGTACCCTTTCTGGAGAAGACCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: QNTYFCSVCCFDLFV*YEFGKYPFWRRPWV
Trigger: CACCCAGGGTCTTCTCCAGAAAGGGTACTTCCCAAATTCATACAACACAAAGAGATCAAAGCAACAAACTGAGCAAAAATAAGTGTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp TTGGTTGTCTGTAGAATTTACAGCCAGCTGATTATCTaGGCTCTTGGTAGCTTTGTCTTTCTCTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LVVCRIYSQLII*ALGSFVFLFSL
Trigger: CAAAGAGAAGAGAAAGACAAAGCTACCAAGAGCCAAGATAATCAGCTGGCTGTAAATTCTACAGACAACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS GCA 72 bp CTTCTTTCTTTGAATTTCTTCAAACCATTCGCCAGTTaGTCCTTGAAGCCATCTGATATCCCTCTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: LLSLNFFKPFAS*SLKPSDIPLCF
Trigger: AAAACAAAGAGGGATATCAGATGGCTTCAAGGAGCAACTGGCGAATGGTTTGAAGAAATTCAAAGAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 90 bp AAACTTCTTTCTTTGAATTTCTTCAAACCATTCGCCAGTTGCTCCTaGAAGCCATCTGATATCCCTCTTTGTTTTCTGAAGTTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: KLLSLNFFKPFASCS*KPSDIPLCFLKFAD
Trigger: ATCAGCAAACTTCAGAAAACAAAGAGGGATATCAGATGGCTTCAAGGAGCAACTGGCGAATGGTTTGAAGAAATTCAAAGAAAGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2
CDS CAA 72 bp TATTTTTGCTCAGTTTGTTGCTTTGATCTCTTTGTGTaGTATGAATTTGGGAAGTACCCTTTCTGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: YFCSVCCFDLFV*YEFGKYPFWRR
Trigger: TCTTCTCCAGAAAGGGTACTTCCCAAATTCATACAACACAAAGAGATCAAAGCAACAAACTGAGCAAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051014.2