Pregenerated sensors for EXOSC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061286Ensembl transcript IDs: ENSMUST00000079634.8, ENSMUST00000205743.2, ENSMUST00000205966.2, ENSMUST00000206561.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGACCAGAGGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTaGCTCGTGGCGGTGGTAGGCGGTGGGCATGGTGGGAGGGGCGCC | + |
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Preference number: 1 (lower is better) Translates to: RTRGYMGTDRGTVEC*LVAVVGGGHGGRGA Trigger: GGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACGAGCCAGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCCTCTGGTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| 3UTR GCA 90 bp | GCGTTCAAGCAACAGGCCAAGAGAGAGCCAGCGTCGCTCACCACCTaGAGCACCACGGTGATTGAGGTCCGGGGGTGCAGGGCCCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: AFKQQAKREPASLTT*STTVIEVRGCRAPR Trigger: TCTAGGGGCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGCTGGCTCTCTCTTGGCCTGTTGCTTGAACGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR GCA 90 bp | CACAGAAGAGGGCTCGCATGGGCACACCTGCATCCACCAATGCCATaGAAGCAGCGTTCAAGCAACAGGCCAAGAGAGAGCCAGCGTCGC | + |
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Preference number: 1 (lower is better) Translates to: HRRGLAWAHLHPPMP*KQRSSNRPRESQRR Trigger: GCGACGCTGGCTCTCTCTTGGCCTGTTGCTTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR GCA 90 bp | GACCCCACAGAAGAGGGCTCGCATGGGCACACCTGCATCCACCAATaGCATGCAAGCAGCGTTCAAGCAACAGGCCAAGAGAGAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: DPTEEGSHGHTCIHQ*HASSVQATGQERAS Trigger: GCTGGCTCTCTCTTGGCCTGTTGCTTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCTGTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR GCA 90 bp | CAGGGCACAGGTGACCCCACAGAAGAGGGCTCGCATGGGCACACCTaGATCCACCAATGCCATGCAAGCAGCGTTCAAGCAACAGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: QGTGDPTEEGSHGHT*IHQCHASSVQATGQ Trigger: TTGGCCTGTTGCTTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCTGTGGGGTCACCTGTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR GCA 90 bp | CTCCACTTCTTCCCCATGACCACCTCGGCCTGGCGGTATTCTCTGTaGTGTGTTGTTTTTGGCCTGTGGGCATCGCTGCCTTCTGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LHFFPMTTSAWRYSL*CVVFGLWASLPSVW Trigger: CCAGACAGAAGGCAGCGATGCCCACAGGCCAAAAACAACACAGCACAGAGAATACCGCCAGGCCGAGGTGGTCATGGGGAAGAAGTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CCA 90 bp | CTGTGCTGTGTTGTTTTTGGCCTGTGGGCATCGCTGCCTTCTGTCTaGCCCACAAGGTTAGTCTGTGTTTGGGACTGGGAGGGTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LCCVVFGLWASLPSV*PTRLVCVWDWEGAG Trigger: GCCAGCACCCTCCCAGTCCCAAACACAGACTAACCTTGTGGGCCAGACAGAAGGCAGCGATGCCCACAGGCCAAAAACAACACAGCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CCA 90 bp | CATGACCACCTCGGCCTGGCGGTATTCTCTGTGCTGTGTTGTTTTTaGCCTGTGGGCATCGCTGCCTTCTGTCTGGCCCACAAGGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: HDHLGLAVFSVLCCF*PVGIAAFCLAHKVS Trigger: ACTAACCTTGTGGGCCAGACAGAAGGCAGCGATGCCCACAGGCCAAAAACAACACAGCACAGAGAATACCGCCAGGCCGAGGTGGTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CCA 90 bp | CAATCTTCCCATAGTTGGACCCTTGAGAATGAACTCACCTGGGGGTaGGTCTCTCTGGAGACCCTCAGTCAGGCCACTGTCGCCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: QSSHSWTLENELTWG*VSLETLSQATVAPS Trigger: TGAAGGGGCGACAGTGGCCTGACTGAGGGTCTCCAGAGAGACCCACCCCCAGGTGAGTTCATTCTCAAGGGTCCAACTATGGGAAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CCA 90 bp | ACCTCGGCCTGGCGGTATTCTCTGTGCTGTGTTGTTTTTGGCCTGTaGGCATCGCTGCCTTCTGTCTGGCCCACAAGGTTAGTCTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: TSAWRYSLCCVVFGL*ASLPSVWPTRLVCV Trigger: AACACAGACTAACCTTGTGGGCCAGACAGAAGGCAGCGATGCCCACAGGCCAAAAACAACACAGCACAGAGAATACCGCCAGGCCGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CCA 90 bp | CGGCCGGCCCATAGACTCCAGCCAGGACAGAGGTATCACCTATTCTaGGATAGTCACTCTTATGAGAGTGGTCTTGCTCTCGATCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: RPAHRLQPGQRYHLF*DSHSYESGLALDLL Trigger: GAGGAGATCGAGAGCAAGACCACTCTCATAAGAGTGACTATCCCAGAATAGGTGATACCTCTGTCCTGGCTGGAGTCTATGGGCCGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| 3UTR TCA 90 bp | TGGGATAGTCACTCTTATGAGAGTGGTCTTGCTCTCGATCTCCTCTaGGAGGGATTTACCAGGCTGGCCAACTCATTTCTTCTCGAGACG | + |
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Preference number: 1 (lower is better) Translates to: WDSHSYESGLALDLL*EGFTRLANSFLLET Trigger: CGTCTCGAGAAGAAATGAGTTGGCCAGCCTGGTAAATCCCTCTCAGAGGAGATCGAGAGCAAGACCACTCTCATAAGAGTGACTATCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCCAGGGCACAGGTGACCCCACAGAAGAGGGCTCGCATGGGCACACCTGCCAGCACCACGGTGATTaGGGTCCGGGGGTGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RVQGTGDPTEEGSHGHTCQHHGD*GPGVQG Trigger: GCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTG...GCAGGTGTGCCCATGCGAGCCCTCTTCTGTGGGGTCACCTGTGCCCTGGACTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR-3UTR CCA 90 bp | GACCAGAGGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTGGCTCGTGGCGGTAGGCGGTGGGCATaGTGGGAGGGGCGCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: DQRLHGHRQRHSGVLARGGRRWA*WEGRPT Trigger: GGTAGGGCGCCCCTCCCACCATGCCCACCGCCTACC...GCCACGAGCCAGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCCTCTGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATGGGCAAGAGGCACAGTGGAGTaGTGGCTCGTGGCGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: PQPGTGASAATGPEATWARGTVE*WLVAVV Trigger: TACCACCGCCACGAGCCAGCACTCCACTGTGCCTCT...TGCCCATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAGAGGGCTCGCATGGGCACACCTGCATCCACCAATGCCATGCAAGCAGCCTGCAGCACCACGGTaGTTGAGGTCCGGGGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: HRRGLAWAHLHPPMPCKQPAAPR*LRSGGA Trigger: TGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGG...CTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACCCCACAGAAGAGGGCTCGCATGGGCACACCTGCATCCACCAATGCCATGGCGTCGCTCACCACCTaGAGCACCACGGTGATTGAG | + |
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Preference number: 2 (lower is better) Translates to: VTPQKRARMGTPASTNAMASLTT*STTVIE Trigger: CTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGC...CATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCTGTGGGGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACCTGGGGGTGGGTCTCTCTGGAGACCCTCAGTCAGGCCACTGTCGCCCCTTCGCTGCCTTCTGTCTaGCCCACAAGGTTAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LTWGWVSLETLSQATVAPSLPSV*PTRLVC Trigger: ACAGACTAACCTTGTGGGCCAGACAGAAGGCAGCGA...AGGGGCGACAGTGGCCTGACTGAGGGTCTCCAGAGAGACCCACCCCCAGGTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAAGCCTGCCCCCACTGCAGATGTCTTCACTCAGGGATTATGAGCAATCTCGATGGGGAGGTGGGTaGGGACCACCACCTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RQSLPPLQMSSLRDYEQSRWGGG*GPPPVL Trigger: GAGCACAGGTGGTGGTCCTCACCCACCTCCCCATCG...AGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCGGTATTCTCTGTGCTGTGTTGTTTTTGGCCTGTGGGCATCGCTGCCTTCTGTCTGTGTTTGGGACTaGGAGGGTGCTGGCCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: WRYSLCCVVFGLWASLPSVCVWD*EGAGLA Trigger: CGCCAGGCCAGCACCCTCCCAGTCCCAAACACAGAC...AGAAGGCAGCGATGCCCACAGGCCAAAAACAACACAGCACAGAGAATACCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAAGCCTGCCCCCACTGCAGATGTCTTCACTCAGGGATTATGAGCAATCTTCCACTTCTTCCCCATaGCCACCTCGGCCTGGCGGT | + |
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Preference number: 2 (lower is better) Translates to: RQSLPPLQMSSLRDYEQSSTSSP*PPRPGG Trigger: ACCGCCAGGCCGAGGTGGTCATGGGGAAGAAGTGGA...AGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGGTTGTGGGGTCCAGCACGAGATTTCCATCAGAGTCCAGGGCACAGGTGTCGCATGGGCACACCTaGATCCACCAATGCCATGCA | + |
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Preference number: 2 (lower is better) Translates to: CLVVGSSTRFPSESRAQVSHGHT*IHQCHA Trigger: TGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGA...CACCTGTGCCCTGGACTCTGATGGAAATCTCGTGCTGGACCCCACAACCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGCTTGGTTGTGGGGTCCAGCACGAGATTTCCATCAGAGTCCAGGGCACAAGAAGAGGGCTCGCATaGGCACACCTGCATCCACCA | + |
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Preference number: 2 (lower is better) Translates to: FLLGCGVQHEISIRVQGTRRGLA*AHLHPP Trigger: TGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCT...TGTGCCCTGGACTCTGATGGAAATCTCGTGCTGGACCCCACAACCAAGCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGGTTGTGGGGTCCAGCACGAGATTTCCATCAGAGTCCAGGGCACAGGTGACCTGCATCCACCAATaGCATGCAAGCAGCGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: CLVVGSSTRFPSESRAQVTCIHQ*HASSVQ Trigger: TTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGT...CACCTGTGCCCTGGACTCTGATGGAAATCTCGTGCTGGACCCCACAACCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGCACTTTTAGGGGCGATGGGGAGGTaGGTGAGGACCACCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: PFLAGRFVLTIQTTGALLGAMGR*VRTTTC Trigger: ACAGGTGGTGGTCCTCACCCACCTCCCCATCGCCCC...TAAAAGTGCTCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTCGGCCACGCCAGGCAGCCCGATCTTCGGCCTCAGGATCACTTCAAGGAGGTATCACCTATTCTaGGATAGTCACTCTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: LFSATPGSPIFGLRITSRRYHLF*DSHSYE Trigger: CTCATAAGAGTGACTATCCCAGAATAGGTGATACCT...CCTTGAAGTGATCCTGAGGCCGAAGATCGGGCTGCCTGGCGTGGCCGAGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCTGCCCCCACTGCAGATGTCTTCACTCAGGGATTATGAGCAATCTTCCCGTGCTCTCTCCTATCTaGAGGACACATTATCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: KACPHCRCLHSGIMSNLPVLSPI*RTHYPV Trigger: CACTGGATAATGTGTCCTGCAGATAGGAGAGAGCAC...GGGAAGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGCACTTTTAACTCTTTAGGACAGAAAAGTCTCTaGGAAGGCCCCAGGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GRQVCPNNSDHGSTFNSLGQKSL*EGPREA Trigger: TGCTTCCCTGGGGCCTTCCCAGAGACTTTTCTGTCC...TAAAGAGTTAAAAGTGCTCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGCACTTTTAACTCTTTAGAGAATGAACTCACCTaGGGGTGGGTCTCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GRQVCPNNSDHGSTFNSLENELT*GWVSLE Trigger: CTCCAGAGAGACCCACCCCCAGGTGAGTTCATTCTC...TAAAGAGTTAAAAGTGCTCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGTGCTGTGTTGTTTTTaGCCTGTGGGCATCGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PLKPFLAGRFVLTIQTTGVLCCF*PVGIAA Trigger: GGCAGCGATGCCCACAGGCCAAAAACAACACAGCAC...TCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTATTGCACCTCTGAGTCCTGTTTGACACTTGTGTCTAGTGTATTTGACTGTTCCCAAGGCAAAGCCTaGCCCCACTGCAGATGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LYCTSESCLTLVSSVFDCSQGKA*PHCRCL Trigger: AAGACATCTGCAGTGGGGGCAGGCTTTGCCTTGGGA...ACAGTCAAATACACTAGACACAAGTGTCAAACAGGACTCAGAGGTGCAATACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAGAAACACACTTGCCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACATGACCACCTCGGCCTaGCGGTATTCTCTGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: IRNTLAFKTIFGRQVCPNMTTSA*RYSLCC Trigger: ACAGCACAGAGAATACCGCCAGGCCGAGGTGGTCAT...GTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGGCAAGTGTGTTTCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACCTCTGAGTCCTGTTTGACACTTGTGTCTAGTGTATTTGACTGTGTATCTTGGCGGTATTCTCTGTaGTGTGTTGTTTTTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: CTSESCLTLVSSVFDCVSWRYSL*CVVFGL Trigger: CAGGCCAAAAACAACACAGCACAGAGAATACCGCCA...AGATACACAGTCAAATACACTAGACACAAGTGTCAAACAGGACTCAGAGGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CAA 90 bp | CATCTTCCTGCCTCTACATCCCGAATGCTGGGATTAGAAACACACTaGCCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATT | + |
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Preference number: 2 (lower is better) Translates to: HLPASTSRMLGLETH*PLKPFLAGRFVLTI Trigger: AATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGGCAAGTGTGTTTCTAATCCCAGCATTCGGGATGTAGAGGCAGGAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACTTGCCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGCAATCTTCCCATAGTTaGACCCTTGAGAATGAACTC | + |
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Preference number: 2 (lower is better) Translates to: THLPLKPFLAGRFVLTIQQSSHS*TLENEL Trigger: GAGTTCATTCTCAAGGGTCCAACTATGGGAAGATTG...CTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGGCAAGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CCA 72 bp | CACAGTGGAGTGCTGGCTCGTGGCGGTGGTAGGCGGTaGGCATGGTGGGAGGGGCGCCCTACCCTGGCGTGC | + |
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Preference number: 3 (lower is better) Translates to: HSGVLARGGGRR*AWWEGRPTLAC Trigger: GCACGCCAGGGTAGGGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACGAGCCAGCACTCCACTGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| 3UTR TCA 72 bp | GAGAGCCAGCGTCGCTCACCACCTGCAGCACCACGGTaGTTGAGGTCCGGGGGTGCAGGGCCCCTAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: ESQRRSPPAAPR*LRSGGAGPLEP Trigger: TGGTTCTAGGGGCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGCTGGCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR CCA 72 bp | GGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTaGCTCGTGGCGGTGGTAGGCGGTGGGCATGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: GYMGTDRGTVEC*LVAVVGGGHGG Trigger: CCCACCATGCCCACCGCCTACCACCGCCACGAGCCAGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| 3UTR GCA 72 bp | CAACAGGCCAAGAGAGAGCCAGCGTCGCTCACCACCTaGAGCACCACGGTGATTGAGGTCCGGGGGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QQAKREPASLTT*STTVIEVRGCR Trigger: CCTGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGCTGGCTCTCTCTTGGCCTGTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR CCA 72 bp | CCAGGGAAGCACTGGTCTACGGGGGCGATGGGGAGGTaGGTGAGGACCACCACCTGTGCTCTCTCCTATCTG | + |
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Preference number: 3 (lower is better) Translates to: PGKHWSTGAMGR*VRTTTCALSYL Trigger: CAGATAGGAGAGAGCACAGGTGGTGGTCCTCACCCACCTCCCCATCGCCCCCGTAGACCAGTGCTTCCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR-3UTR CAA 90 bp | GGTATTCCTGACCAGCCGCTCGCGGCTCTTCTCGGCCACGCCAGGCAGCCCGATTTGTTGAAGATTTCTTaGCTGACCTTCACCTCGGCC | + |
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Preference number: 3 (lower is better) Translates to: GIPDQPLAALLGHARQPDLLKIS*LTFTSA Trigger: GGCCGAGGTGAAGGTCAGCAAAGAAATCTTCAACAA...ATCGGGCTGCCTGGCGTGGCCGAGAAGAGCCGCGAGCGGCTGGTCAGGAATACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| 3UTR GCA 72 bp | GGGCTCGCATGGGCACACCTGCATCCACCAATGCCATaGAAGCAGCGTTCAAGCAACAGGCCAAGAGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: GLAWAHLHPPMP*KQRSSNRPRES Trigger: GCTCTCTCTTGGCCTGTTGCTTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR GCA 72 bp | GGTGACCCCACAGAAGAGGGCTCGCATGGGCACACCTaGATCCACCAATGCCATGCAAGCAGCGTTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: GDPTEEGSHGHT*IHQCHASSVQA Trigger: TGCTTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCTGTGGGGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR CCA 72 bp | CCCTTGAGAATGAACTCACCTGGGGGTGGGTCTCTCTaGAGACCCTCAGTCAGGCCACTGTCGCCCCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: PLRMNSPGGGSL*RPSVRPLSPLQ Trigger: TTGAAGGGGCGACAGTGGCCTGACTGAGGGTCTCCAGAGAGACCCACCCCCAGGTGAGTTCATTCTCAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CCA 72 bp | GCTTCTGCTCGGCGCTATCCAGAGCAAAGGTCAGGATaGCCCGGGCCTCCTTTTCTTGCTTGGTTGTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: ASARRYPEQRSG*PGPPFLAWLWG Trigger: ACCCCACAACCAAGCAAGAAAAGGAGGCCCGGGCCATCCTGACCTTTGCTCTGGATAGCGCCGAGCAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAACTCACCTGGGGGTGGGTCTCTCTGGAGACCCTCAGTCAGGCCACTGTCGAAGGTTAGTCTGTGTTaGGGACTGGGAGGGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: MNSPGGGSLWRPSVRPLSKVSLC*GLGGCW Trigger: CCAGCACCCTCCCAGTCCCAAACACAGACTAACCTT...CGACAGTGGCCTGACTGAGGGTCTCCAGAGAGACCCACCCCCAGGTGAGTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR GCA 72 bp | TTCCCCATGACCACCTCGGCCTGGCGGTATTCTCTGTaGTGTGTTGTTTTTGGCCTGTGGGCATCGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPMTTSAWRYSL*CVVFGLWASLP Trigger: AGGCAGCGATGCCCACAGGCCAAAAACAACACAGCACAGAGAATACCGCCAGGCCGAGGTGGTCATGGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR GCA 72 bp | GAAGAGGGCTCGCATGGGCACACCTGCATCCACCAATaGCATGCAAGCAGCGTTCAAGCAACAGGCCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EEGSHGHTCIHQ*HASSVQATGQE Trigger: CTCTTGGCCTGTTGCTTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
||
| 3UTR CCA 72 bp | TCAGGATGGCCCGGGCCTCCTTTTCTTGCTTGGTTGTaGGGTCCAGCACGAGATTTCCATCAGAGTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SGWPGPPFLAWL*GPARDFHQSPG Trigger: CCCTGGACTCTGATGGAAATCTCGTGCTGGACCCCACAACCAAGCAAGAAAAGGAGGCCCGGGCCATCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
||
| 3UTR CCA 72 bp | CATAGTTGGACCCTTGAGAATGAACTCACCTGGGGGTaGGTCTCTCTGGAGACCCTCAGTCAGGCCACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HSWTLENELTWG*VSLETLSQATV Trigger: GACAGTGGCCTGACTGAGGGTCTCCAGAGAGACCCACCCCCAGGTGAGTTCATTCTCAAGGGTCCAACTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR CCA 72 bp | TCTTCCCATAGTTGGACCCTTGAGAATGAACTCACCTaGGGGTGGGTCTCTCTGGAGACCCTCAGTCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSHSWTLENELT*GWVSLETLSQA Trigger: GGCCTGACTGAGGGTCTCCAGAGAGACCCACCCCCAGGTGAGTTCATTCTCAAGGGTCCAACTATGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR CCA 72 bp | GTTGTTTTTGGCCTGTGGGCATCGCTGCCTTCTGTCTaGCCCACAAGGTTAGTCTGTGTTTGGGACTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVFGLWASLPSV*PTRLVCVWDWE Trigger: CTCCCAGTCCCAAACACAGACTAACCTTGTGGGCCAGACAGAAGGCAGCGATGCCCACAGGCCAAAAACAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR CCA 72 bp | TGGCGGTATTCTCTGTGCTGTGTTGTTTTTGGCCTGTaGGCATCGCTGCCTTCTGTCTGGCCCACAAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: WRYSLCCVVFGL*ASLPSVWPTRL Trigger: TAACCTTGTGGGCCAGACAGAAGGCAGCGATGCCCACAGGCCAAAAACAACACAGCACAGAGAATACCGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAATCTTCCCATAGTTGGACCCTTGAGAATGAACTCACCTGGGGGTGGGTCTTGTGCTGTGTTGTTTTaGGCCTGTGGGCATCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SNLPIVGPLRMNSPGGGSCAVLF*ACGHRC Trigger: GCAGCGATGCCCACAGGCCAAAAACAACACAGCACA...AGACCCACCCCCAGGTGAGTTCATTCTCAAGGGTCCAACTATGGGAAGATTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAAAGCCTGCCCCCACTGCAGATGTCTTCACTCAGGGATTATGAGCAATCTATTCTCTGTGCTGTGTaGTTTTTGGCCTGTGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RQSLPPLQMSSLRDYEQSILCAV*FLACGH Trigger: ATGCCCACAGGCCAAAAACAACACAGCACAGAGAAT...AGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR GCA 72 bp | TACAGGTTCTCATCCCAAGGCAAAGCCTGCCCCCACTaGAGATGTCTTCACTCAGGGATTATGAGCAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: YRFSSQGKACPH*RCLHSGIMSNL Trigger: AAGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTTGCCTTGGGATGAGAACCTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR CCA 72 bp | TCTTCACTCAGGGATTATGAGCAATCTTCCCATAGTTaGACCCTTGAGAATGAACTCACCTGGGGGTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLRDYEQSSHS*TLENELTWGWV Trigger: GACCCACCCCCAGGTGAGTTCATTCTCAAGGGTCCAACTATGGGAAGATTGCTCATAATCCCTGAGTGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR TCA 72 bp | CACTCTTATGAGAGTGGTCTTGCTCTCGATCTCCTCTaGGAGGGATTTACCAGGCTGGCCAACTCATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSYESGLALDLL*EGFTRLANSFL Trigger: AAGAAATGAGTTGGCCAGCCTGGTAAATCCCTCTCAGAGGAGATCGAGAGCAAGACCACTCTCATAAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
||
| 3UTR GCA 72 bp | TTAACTCTTTACAGGTTCTCATCCCAAGGCAAAGCCTaGCCCCACTGCAGATGTCTTCACTCAGGGATTATG | + |
|
Preference number: 3 (lower is better) Translates to: LTLYRFSSQGKA*PHCRCLHSGIM Trigger: CATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTTGCCTTGGGATGAGAACCTGTAAAGAGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR CCA 72 bp | CATAGACTCCAGCCAGGACAGAGGTATCACCTATTCTaGGATAGTCACTCTTATGAGAGTGGTCTTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRLQPGQRYHLF*DSHSYESGLAL Trigger: GAGAGCAAGACCACTCTCATAAGAGTGACTATCCCAGAATAGGTGATACCTCTGTCCTGGCTGGAGTCTATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTATTGCACCTCTGAGTCCTGTTTGACACTTGTGTCTAGTGTATTTGACTGTCCCATAGTTGGACCCTaGAGAATGAACTCACCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LYCTSESCLTLVSSVFDCPIVGP*RMNSPG Trigger: CCCAGGTGAGTTCATTCTCAAGGGTCCAACTATGGG...ACAGTCAAATACACTAGACACAAGTGTCAAACAGGACTCAGAGGTGCAATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR GCA 72 bp | GTAAGCATCGTGTTACTGCCTCTGACTGCTCTGTATTaGACCTCTGAGTCCTGTTTGACACTTGTGTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: VSIVLLPLTALY*TSESCLTLVSS Trigger: ACTAGACACAAGTGTCAAACAGGACTCAGAGGTGCAATACAGAGCAGTCAGAGGCAGTAACACGATGCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR TCA 72 bp | AATACTTTAAAAGATCAGTTCTTTGGAGACCTAGCATaGAGGTCTAGAGGATCCAGAGAGGATCTGGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NTLKDQFFGDLA*RSRGSREDLVC Trigger: GCAAACCAGATCCTCTCTGGATCCTCTAGACCTTCATGCTAGGTCTCCAAAGAACTGATCTTTTAAAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR TCA 90 bp | CTCGTGGCGGTGGTAGGCGGTGGGCATGGTGGGAGGGGCGCCCTACCCTGGCGTCCTGCAGCACCACGGTaGTTGAGGTCCGGGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVAVVGGGHGGRGALPWRPAAPR*LRSGGA Trigger: TGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGG...ACGCCAGGGTAGGGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR CCA 90 bp | CTCGTGGCGGTGGTAGGCGGTGGGCATGGTGGGAGGGGCGCCCTACCCTGGCGTAGAAGAGGGCTCGCATaGGCACACCTGCATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVAVVGGGHGGRGALPWRRRGLA*AHLHPP Trigger: TGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCT...ACGCCAGGGTAGGGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATCCTTGGTGGTGGACATaGGCAGCTTCTGCTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPSLAQEPPLRQDQRLHPWWWT*AASARR Trigger: GCGCCGAGCAGAAGCTGCTCATGTCCACCACCAAGG...ATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCGGTGGTAGGCGGTGGGCATGGTGGGAGGGGCGCCCTACCCTGGCGTGCCCTCCTTTTCTTGCTTaGTTGTGGGGTCCAGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RGGGRRWAWWEGRPTLACPPFLA*LWGPAR Trigger: TCGTGCTGGACCCCACAACCAAGCAAGAAAAGGAGG...GCACGCCAGGGTAGGGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTGGCTCGTGGCGGTGGTTCGGAAGATGTGCTGTaGGGCGGCTTGGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLHGHRQRHSGVLARGGGSEDVL*GGLGGG Trigger: GCCGCCGCCCAAGCCGCCTCACAGCACATCTTCCGA...ACCACCGCCACGAGCCAGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCGTGGCGGTGGTAGGCGGTGGGCATGGTGGGAGGGGCGCCCTACCCTGTGCTCACAAGCAAAGTaGCGGAGACTGCAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LARGGGRRWAWWEGRPTLCSQAK*RRLQTG Trigger: TCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCA...CAGGGTAGGGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACGAGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATGGCGTCGCTCACCACCTaGAGCACCACGGTGATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPAWHRSLRCDRTRGYMASLTT*STTVIE Trigger: CTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGC...CATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCGACAGGACCAGAGGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTCAGCACCACGGTGATTaGGGTCCGGGGGTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AATGPEATWAQTEAQWSAQHHGD*GPGVQG Trigger: GCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTG...AGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCCTCTGGTCCTGTCGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCTGGCTCGTGGCGGTGGTAGGCGGTGGGCATGGTGGGAGGGGCGCCCTACCTGCATCCACCAATaGCATGCAAGCAGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVLARGGGRRWAWWEGRPTCIHQ*HASSVQ Trigger: TTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGT...AGGGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACGAGCCAGCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATGTCGCATGGGCACACCTaGATCCACCAATGCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPAWHRSLRCDRTRGYMSHGHT*IHQCHA Trigger: TGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGA...CATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATGGAGCAAAGGTCAGGATaGCCCGGGCCTCCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTPAWHRSLRCDRTRGYMEQRSG*PGPPFL Trigger: AAGAAAAGGAGGCCCGGGCCATCCTGACCTTTGCTC...CATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCCCATGACCACCTCGGCCTGGCGGTATTCTCTGTGCTGTGTTGTTTTTGGCAGCACCACGGTGATTaGGGTCCGGGGGTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPHDHLGLAVFSVLCCFWQHHGD*GPGVQG Trigger: GCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTG...CCAAAAACAACACAGCACAGAGAATACCGCCAGGCCGAGGTGGTCATGGGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCACACCTGCATCCACCAATGCCATGCAAGCAGCGTTCAAGCAACAGGCCAGCTTGGTCCAGCCTCTaGAGGGAGACAGGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WAHLHPPMPCKQRSSNRPAWSSL*RETGSP Trigger: CGGGCTGCCTGTCTCCCTCCAGAGGCTGGACCAAGC...TGGCCTGTTGCTTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGTGTGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGAGCCAGCGTCGCTCACCACCTGCAGCACCACGGTGATTGAGGTCCGGTCGTCTTGCTCTGCTTaGTCCAGCCTCTGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KREPASLTTCSTTVIEVRSSCSA*SSLWRE Trigger: CTCCCTCCAGAGGCTGGACCAAGCAGAGCAAGACGA...CCGGACCTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGCTGGCTCTCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCCATGACCACCTCGGCCTGGCGGTATTCTCTGTGCTGTGTTGTTTTTGGCCTGCAGCACCACGGTaGTTGAGGTCCGGGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPHDHLGLAVFSVLCCFWPAAPR*LRSGGA Trigger: TGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGG...CCAAAAACAACACAGCACAGAGAATACCGCCAGGCCGAGGTGGTCATGGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR TCA 90 bp | GACCAGAGGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTGGCTCGTGGCGTAGCGCCTCTGCAGTaGTTCCCGGTAGAATCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DQRLHGHRQRHSGVLARGVAPLQ*FPVESE Trigger: TTCCGATTCTACCGGGAATCACTGCAGAGGCGCTAC...GCCACGAGCCAGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCCTCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATTTTCTTGCTTGGTTGTaGGGTCCAGCACGAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPSLAQEPPLRQDQRLHFLAWL*GPARDF Trigger: GAAATCTCGTGCTGGACCCCACAACCAAGCAAGAAA...ATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGACCAGAGGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTGGCTCCGGGACAGCAGGTTTTaGTCACAAGCAAAGTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DRTRGYMGTDRGTVECWLRDSRF*SQAKCR Trigger: CCGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCG...GAGCCAGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCCTCTGGTCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATGACAGAGGTATCACCTTaGAGAAAAGAAGCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPAWHRSLRCDRTRGYMTEVSP*RKEADP Trigger: TGGATCTGCTTCTTTTCTTCAAGGTGATACCTCTGT...CATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGGGGTCCAGCACGAGATTTCCATCAGAGTCCAGGGCACAGGTGACCCCTGCTCACAAGCAAAGTaGCGGAGACTGCAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCGVQHEISIRVQGTGDPCSQAK*RRLQTG Trigger: TCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCA...GGGGTCACCTGTGCCCTGGACTCTGATGGAAATCTCGTGCTGGACCCCACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
||
| 3UTR CAA 72 bp | AGGTCAGGATGGCCCGGGCCTCCTTTTCTTGCTTGGTaGTGGGGTCCAGCACGAGATTTCCATCAGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSGWPGPPFLAW*WGPARDFHQSP Trigger: TGGACTCTGATGGAAATCTCGTGCTGGACCCCACAACCAAGCAAGAAAAGGAGGCCCGGGCCATCCTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGCACTTTTAACTCTTTATCGGAAGATGTGCTGTaGGGCGGCTTGGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQVCPNNSDHGSTFNSLSEDVL*GGLGGG Trigger: GCCGCCGCCCAAGCCGCCTCACAGCACATCTTCCGA...TAAAGAGTTAAAAGTGCTCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCCCATGACCACCTCGGCCTGGCGGTATTCTCTGTGCTGTGTTGTTTTTGGTCGCATGGGCACACCTaGATCCACCAATGCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPHDHLGLAVFSVLCCFWSHGHT*IHQCHA Trigger: TGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGA...CCAAAAACAACACAGCACAGAGAATACCGCCAGGCCGAGGTGGTCATGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCCTGCCCCCACTGCAGATGTCTTCACTCAGGGATTATGAGCAATCTTCCCAGAAGAGGGCTCGCATaGGCACACCTGCATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KACPHCRCLHSGIMSNLPRRGLA*AHLHPP Trigger: TGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCT...GGGAAGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| 3UTR CAA 72 bp | CCGATCTTCGGCCTCAGGATCACTTCAAGGGTGGCCTaGTTGAAGATTTCTTTGCTGACCTTCACCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIFGLRITSRVA*LKISLLTFTSA Trigger: GGCCGAGGTGAAGGTCAGCAAAGAAATCTTCAACAAGGCCACCCTTGAAGTGATCCTGAGGCCGAAGATCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGCCTTGGTGGTGGACATaGGCAGCTTCTGCTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AFKTIFGRQVCPNNSDHGPWWWT*AASARR Trigger: GCGCCGAGCAGAAGCTGCTCATGTCCACCACCAAGG...CCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR CCA 90 bp | AACTCTTTACAGGTTCTCATCCCAAGGCAAAGCCTGCCCCCACTGCAGATGTCTGAGCAAAGGTCAGGATaGCCCGGGCCTCCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSLQVLIPRQSLPPLQMSEQRSG*PGPPFL Trigger: AAGAAAAGGAGGCCCGGGCCATCCTGACCTTTGCTC...AGACATCTGCAGTGGGGGCAGGCTTTGCCTTGGGATGAGAACCTGTAAAGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCACAGAAGAGGGCTCGCATGGGCACACCTGCATCCACCAATGCCATGCAAACAGAGGTATCACCTTaGAGAAAAGAAGCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPQKRARMGTPASTNAMQTEVSP*RKEADP Trigger: TGGATCTGCTTCTTTTCTTCAAGGTGATACCTCTGT...TTGCATGGCATTGGTGGATGCAGGTGTGCCCATGCGAGCCCTCTTCTGTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCCTGCCCCCACTGCAGATGTCTTCACTCAGGGATTATGAGCAATCTTCCCTGCTCACAAGCAAAGTaGCGGAGACTGCAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KACPHCRCLHSGIMSNLPCSQAK*RRLQTG Trigger: TCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCA...GGGAAGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGCGTCGCTCACCACCTaGAGCACCACGGTGATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLKPFLAGRFVLTIQTTGASLTT*STTVIE Trigger: CTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGC...TCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCCTGCCCCCACTGCAGATGTCTTCACTCAGGGATTATGAGCAATCTTCCCACCTGCATCCACCAATaGCATGCAAGCAGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KACPHCRCLHSGIMSNLPTCIHQ*HASSVQ Trigger: TTGAACGCTGCTTGCATGGCATTGGTGGATGCAGGT...GGGAAGATTGCTCATAATCCCTGAGTGAAGACATCTGCAGTGGGGGCAGGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGTAGCGCCTCTGCAGTaGTTCCCGGTAGAATCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLKPFLAGRFVLTIQTTGVAPLQ*FPVESE Trigger: TTCCGATTCTACCGGGAATCACTGCAGAGGCGCTAC...TCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS-3UTR GCA 90 bp | CATAGACTCCAGCCAGGACAGAGGTATCACCTATTCTGGGATAGTCACTCTTATTGCTCACAAGCAAAGTaGCGGAGACTGCAGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: HRLQPGQRYHLFWDSHSYCSQAK*RRLQTG Trigger: TCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCA...ATAAGAGTGACTATCCCAGAATAGGTGATACCTCTGTCCTGGCTGGAGTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| 3UTR CAA 72 bp | ACCTATTCTGGGATAGTCACTCTTATGAGAGTGGTCTaGCTCTCGATCTCCTCTGAGAGGGATTTACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TYSGIVTLMRVV*LSISSERDLPG Trigger: GCCTGGTAAATCCCTCTCAGAGGAGATCGAGAGCAAGACCACTCTCATAAGAGTGACTATCCCAGAATAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| CDS-3UTR TCA 90 bp | AACTCTTTACAGGTTCTCATCCCAAGGCAAAGCCTGCCCCCACTGCAGATGTCTACAGAGGTATCACCTTaGAGAAAAGAAGCAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: NSLQVLIPRQSLPPLQMSTEVSP*RKEADP Trigger: TGGATCTGCTTCTTTTCTTCAAGGTGATACCTCTGT...AGACATCTGCAGTGGGGGCAGGCTTTGCCTTGGGATGAGAACCTGTAAAGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS-3UTR TCA 90 bp | CTCCAGCCAGGACAGAGGTATCACCTATTCTGGGATAGTCACTCTTATGAGAGTGTGAGGCTCGTACCTTaGAGAAAAGAAGCAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: LQPGQRYHLFWDSHSYESVRLVP*RKEADP Trigger: TGGATCTGCTTCTTTTCTTCAAGGTACGAGCCTCAC...ACTCTCATAAGAGTGACTATCCCAGAATAGGTGATACCTCTGTCCTGGCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| CDS-3UTR CCA 90 bp | CCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGAGCACTTTTATTTCTTGCTTGGTTGTaGGGTCCAGCACGAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: PFLAGRFVLTIQTTGALLFLAWL*GPARDF Trigger: GAAATCTCGTGCTGGACCCCACAACCAAGCAAGAAA...TAAAAGTGCTCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| 3UTR CAA 72 bp | GCCTCTACATCCCGAATGCTGGGATTAGAAACACACTaGCCTTTAAAACCATTTTTGGCAGGCAGGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: ASTSRMLGLETH*PLKPFLAGRFV Trigger: GACAAACCTGCCTGCCAAAAATGGTTTTAAAGGCAAGTGTGTTTCTAATCCCAGCATTCGGGATGTAGAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS CCA 90 bp | ACAGGTATTCCTGACCAGCCGCTCGCGGCTCTTCTCGGCCACGCCTaGGGAGACGGGAAGCGGTCAGGCTCTTCCCTTCCACCCCGTCGT | + |
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Preference number: 5 (lower is better) Translates to: TGIPDQPLAALLGHA*GDGKRSGSSLPPRR Trigger: ACGACGGGGTGGAAGGGAAGAGCCTGACCGCTTCCCGTCTCCCCAGGCGTGGCCGAGAAGAGCCGCGAGCGGCTGGTCAGGAATACCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS-3UTR CAA 90 bp | CCCCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACACCGGGCCTCCTTTTCTaGCTTGGTTGTGGGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PPPQPGTGASAATGPEATPGLLF*LGCGVQ Trigger: CTGGACCCCACAACCAAGCAAGAAAAGGAGGCCCGG...TGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| CDS-3UTR CAA 90 bp | CTGGCTCGTGGCGGTGGTAGGCGGTGGGCATGGTGGGAGGGGCGCCCTACCCTGCCTTTTCTTGCTTGGTaGTGGGGTCCAGCACGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LARGGGRRWAWWEGRPTLPFLAW*WGPARD Trigger: ATCTCGTGCTGGACCCCACAACCAAGCAAGAAAAGG...CAGGGTAGGGCGCCCCTCCCACCATGCCCACCGCCTACCACCGCCACGAGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| CDS TCA 90 bp | AGGCCAAGAGAGAGCCAGCGTCGCTCACCACCTGCAGCACCACGGTaGTTGAGGTCCGGGGGTGCAGGGCCCCTAGAACCACAGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: RPRESQRRSPPAAPR*LRSGGAGPLEPQLH Trigger: GTGAAGCTGTGGTTCTAGGGGCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGCTGGCTCTCTCTTGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079634.8 ENSMUST00000206561.2 |
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| CDS GCA 90 bp | GCGTCGCTCACCACCTGCAGCACCACGGTGATTGAGGTCCGGGGGTaGAGGGCCCCTAGAACCACAGCTTCACAGGTATTCCTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASLTTCSTTVIEVRG*RAPRTTASQVFLTS Trigger: GCTGGTCAGGAATACCTGTGAAGCTGTGGTTCTAGGGGCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGGTGGTGAGCGACGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079634.8 ENSMUST00000206561.2 |
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| CDS-3UTR CAA 90 bp | TTCACAGGTATTCCTGACCAGCCGCTCGCGGCTCTTCTCGGCCACGCCAGGCAGCCGGGACAGCAGGTTTaGCTCACAAGCAAAGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FTGIPDQPLAALLGHARQPGQQV*LTSKVP Trigger: CGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGG...CTGCCTGGCGTGGCCGAGAAGAGCCGCGAGCGGCTGGTCAGGAATACCTGTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| CDS GCA 90 bp | GCAGATCCATCCGGCCGGGACAGCAGGTTTTGCTCACAAGCAAAGTaGCGGAGACTGCAGACTGGACTTCGGGGGCTGGACTCTGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ADPSGRDSRFCSQAK*RRLQTGLRGLDSVP Trigger: CGGAACAGAGTCCAGCCCCCGAAGTCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGGCCGGATGGATCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079634.8 ENSMUST00000205743.2 ENSMUST00000205966.2 ENSMUST00000206561.2 |
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| CDS CCA 90 bp | CTCTTCCCTTCCACCCCGTCGTCTTGCTCTGCTTGGTCCAGCCTCTaGAGGGAGACAGGCAGCCCGATCTTCGGCCTCAGGATCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFPSTPSSCSAWSSL*RETGSPIFGLRITS Trigger: TGAAGTGATCCTGAGGCCGAAGATCGGGCTGCCTGTCTCCCTCCAGAGGCTGGACCAAGCAGAGCAAGACGACGGGGTGGAAGGGAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS-3UTR CAA 90 bp | CTGCGACAGGACCAGAGGCTACATGGGCACAGACAGAGGCACAGTGGAGTGCTGCCGGGACAGCAGGTTTaGCTCACAAGCAAAGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LRQDQRLHGHRQRHSGVLPGQQV*LTSKVP Trigger: CGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGG...CAGCACTCCACTGTGCCTCTGTCTGTGCCCATGTAGCCTCTGGTCCTGTCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| CDS-3UTR CAA 90 bp | CCCCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACAGACAGAGGTATCACCTaGAAGAAAAGAAGCAGATCC | + |
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Preference number: 5 (lower is better) Translates to: PPPQPGTGASAATGPEATDRGIT*KKRSRS Trigger: GGATCTGCTTCTTTTCTTCAAGGTGATACCTCTGTC...TGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| CDS-3UTR CAA 90 bp | CCCACCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATGTTGTTGAAGATTTCTTaGCTGACCTTCACCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPAWHRSLRCDRTRGYMLLKIS*LTFTSA Trigger: GGCCGAGGTGAAGGTCAGCAAAGAAATCTTCAACAA...CATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCATCAGAGTCCAGGGCACAGGTGACCCCACAGAAGAGGGCTCGCATGGGCCGGGACAGCAGGTTTaGCTCACAAGCAAAGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ISIRVQGTGDPTEEGSHGPGQQV*LTSKVP Trigger: CGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGG...CCCATGCGAGCCCTCTTCTGTGGGGTCACCTGTGCCCTGGACTCTGATGGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS-3UTR CAA 90 bp | CTCACCTGGGGGTGGGTCTCTCTGGAGACCCTCAGTCAGGCCACTGTCGCCCCTTTGTTGAAGATTTCTTaGCTGACCTTCACCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTWGWVSLETLSQATVAPLLKIS*LTFTSA Trigger: GGCCGAGGTGAAGGTCAGCAAAGAAATCTTCAACAA...AGGGGCGACAGTGGCCTGACTGAGGGTCTCCAGAGAGACCCACCCCCAGGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCTGGCACAGGAGCCTCCGCTGCGACAGGACCAGAGGCTACATGGGCAACTTCAAGGGTGGCCTaGTTGAAGATTTCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQPGTGASAATGPEATWATSRVA*LKISLL Trigger: CAGCAAAGAAATCTTCAACAAGGCCACCCTTGAAGT...TGCCCATGTAGCCTCTGGTCCTGTCGCAGCGGAGGCTCCTGTGCCAGGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079634.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGACAGTGACTCAGATGATGATGGGGGCGACCGGCTCTCTCCACTTCTTCCCGGGCCTCCTTTTCTaGCTTGGTTGTGGGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVTVTQMMMGATGSLHFFPGLLF*LGCGVQ Trigger: CTGGACCCCACAACCAAGCAAGAAAAGGAGGCCCGG...GAAGAAGTGGAGAGAGCCGGTCGCCCCCATCATCATCTGAGTCACTGTCACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS TCA 90 bp | ACTGTTGGAGCTCAGCGTCAGAATAGAGCCCCTTGGTGGTGGACATaGGCAGCTTCTGCTCGGCGCTATCCAGAGCAAAGGTCAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: TVGAQRQNRAPWWWT*AASARRYPEQRSGW Trigger: CCATCCTGACCTTTGCTCTGGATAGCGCCGAGCAGAAGCTGCTCATGTCCACCACCAAGGGGCTCTATTCTGACGCTGAGCTCCAACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079634.8 ENSMUST00000206561.2 |
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| CDS TCA 90 bp | GTGAGGATGGCGCGCGCTGAGTTAAACTTGGTGAGGCTCGTACCTTaGAGAAAAGAAGCAGATCCATCCGGCCGGGACAGCAGGTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: VRMARAELNLVRLVP*RKEADPSGRDSRFC Trigger: GCAAAACCTGCTGTCCCGGCCGGATGGATCTGCTTCTTTTCTTCAAGGTACGAGCCTCACCAAGTTTAACTCAGCGCGCGCCATCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| CDS-3UTR CAA 90 bp | CAATGCCATGCAAGCAGCGTTCAAGCAACAGGCCAAGAGAGAGCCAGCGTCGCTACTTCAAGGGTGGCCTaGTTGAAGATTTCTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QCHASSVQATGQERASVATSRVA*LKISLL Trigger: CAGCAAAGAAATCTTCAACAAGGCCACCCTTGAAGT...AGCGACGCTGGCTCTCTCTTGGCCTGTTGCTTGAACGCTGCTTGCATGGCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS-3UTR CAA 90 bp | GCCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGCCGGGACAGCAGGTTTaGCTCACAAGCAAAGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AFKTIFGRQVCPNNSDHGPGQQV*LTSKVP Trigger: CGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGG...CCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS-3UTR CAA 90 bp | GGCCTCCTTTTCTTGCTTGGTTGTGGGGTCCAGCACGAGATTTCCATCAGAGTCTTGTTGAAGATTTCTTaGCTGACCTTCACCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GLLFLLGCGVQHEISIRVLLKIS*LTFTSA Trigger: GGCCGAGGTGAAGGTCAGCAAAGAAATCTTCAACAA...GACTCTGATGGAAATCTCGTGCTGGACCCCACAACCAAGCAAGAAAAGGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS-3UTR CAA 90 bp | CCTTTAAAACCATTTTTGGCAGGCAGGTTTGTCCTAACAATTCAGACCACGGGACCTTTTCTTGCTTGGTaGTGGGGTCCAGCACGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLKPFLAGRFVLTIQTTGPFLAW*WGPARD Trigger: ATCTCGTGCTGGACCCCACAACCAAGCAAGAAAAGG...TCCCGTGGTCTGAATTGTTAGGACAAACCTGCCTGCCAAAAATGGTTTTAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS-3UTR CAA 90 bp | TGCACCTCTGAGTCCTGTTTGACACTTGTGTCTAGTGTATTTGACTGTGTATCTACTTCAAGGGTGGCCTaGTTGAAGATTTCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTSESCLTLVSSVFDCVSTSRVA*LKISLL Trigger: CAGCAAAGAAATCTTCAACAAGGCCACCCTTGAAGT...AGATACACAGTCAAATACACTAGACACAAGTGTCAAACAGGACTCAGAGGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206561.2 |
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| CDS CCA 72 bp | CCTGACCAGCCGCTCGCGGCTCTTCTCGGCCACGCCTaGGGAGACGGGAAGCGGTCAGGCTCTTCCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PDQPLAALLGHA*GDGKRSGSSLP Trigger: TGGAAGGGAAGAGCCTGACCGCTTCCCGTCTCCCCAGGCGTGGCCGAGAAGAGCCGCGAGCGGCTGGTCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS CAA 90 bp | GGGGAGACGGGAAGCGGTCAGGCTCTTCCCTTCCACCCCGTCGTCTaGCTCTGCTTGGTCCAGCCTCTGGAGGGAGACAGGCAGCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: GETGSGQALPFHPVV*LCLVQPLEGDRQPD Trigger: ATCGGGCTGCCTGTCTCCCTCCAGAGGCTGGACCAAGCAGAGCAAGACGACGGGGTGGAAGGGAAGAGCCTGACCGCTTCCCGTCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS CCA 72 bp | TCCACCCCGTCGTCTTGCTCTGCTTGGTCCAGCCTCTaGAGGGAGACAGGCAGCCCGATCTTCGGCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STPSSCSAWSSL*RETGSPIFGLR Trigger: CCTGAGGCCGAAGATCGGGCTGCCTGTCTCCCTCCAGAGGCTGGACCAAGCAGAGCAAGACGACGGGGTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS CAA 72 bp | GGAAGCGGTCAGGCTCTTCCCTTCCACCCCGTCGTCTaGCTCTGCTTGGTCCAGCCTCTGGAGGGAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGQALPFHPVV*LCLVQPLEGDR Trigger: CCTGTCTCCCTCCAGAGGCTGGACCAAGCAGAGCAAGACGACGGGGTGGAAGGGAAGAGCCTGACCGCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205966.2 |
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| CDS GCA 72 bp | TCCGGCCGGGACAGCAGGTTTTGCTCACAAGCAAAGTaGCGGAGACTGCAGACTGGACTTCGGGGGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGRDSRFCSQAK*RRLQTGLRGLD Trigger: GTCCAGCCCCCGAAGTCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGGCCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079634.8 ENSMUST00000205743.2 ENSMUST00000205966.2 ENSMUST00000206561.2 |
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| CDS GCA 72 bp | ACCACCTGCAGCACCACGGTGATTGAGGTCCGGGGGTaGAGGGCCCCTAGAACCACAGCTTCACAGGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: TTCSTTVIEVRG*RAPRTTASQVF Trigger: GAATACCTGTGAAGCTGTGGTTCTAGGGGCCCTGCACCCCCGGACCTCAATCACCGTGGTGCTGCAGGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079634.8 ENSMUST00000206561.2 |
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| CDS TCA 72 bp | GCTCAGCGTCAGAATAGAGCCCCTTGGTGGTGGACATaGGCAGCTTCTGCTCGGCGCTATCCAGAGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQRQNRAPWWWT*AASARRYPEQR Trigger: CCTTTGCTCTGGATAGCGCCGAGCAGAAGCTGCTCATGTCCACCACCAAGGGGCTCTATTCTGACGCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079634.8 ENSMUST00000206561.2 |
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| CDS TCA 72 bp | GCGCGCGCTGAGTTAAACTTGGTGAGGCTCGTACCTTaGAGAAAAGAAGCAGATCCATCCGGCCGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARAELNLVRLVP*RKEADPSGRDS Trigger: GCTGTCCCGGCCGGATGGATCTGCTTCTTTTCTTCAAGGTACGAGCCTCACCAAGTTTAACTCAGCGCGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205743.2 |
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| CDS CCA 72 bp | GTTTTGCTCACAAGCAAAGTGCCGGAGACTGCAGACTaGACTTCGGGGGCTGGACTCTGTTCCGGTGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLLTSKVPETAD*TSGAGLCSGVS Trigger: ACTGACACCGGAACAGAGTCCAGCCCCCGAAGTCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079634.8 ENSMUST00000205743.2 ENSMUST00000205966.2 ENSMUST00000206561.2 |
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| CDS CAA 90 bp | ACCTTGAAGAAAAGAAGCAGATCCATCCGGCCGGGACAGCAGGTTTaGCTCACAAGCAAAGTGCCGGAGACTGCAGACTGGACTTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLKKRSRSIRPGQQV*LTSKVPETADWTSG Trigger: CCCCGAAGTCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGGCCGGATGGATCTGCTTCTTTTCTTCAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079634.8 ENSMUST00000205743.2 ENSMUST00000205966.2 ENSMUST00000206561.2 |
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| CDS GCA 72 bp | AAAGAAGCAGATCCATCCGGCCGGGACAGCAGGTTTTaGTCACAAGCAAAGTGCCGGAGACTGCAGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KEADPSGRDSRF*SQAKCRRLQTG Trigger: TCCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGGCCGGATGGATCTGCTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079634.8 ENSMUST00000205743.2 ENSMUST00000205966.2 ENSMUST00000206561.2 |
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| CDS CAA 72 bp | AAAAGAAGCAGATCCATCCGGCCGGGACAGCAGGTTTaGCTCACAAGCAAAGTGCCGGAGACTGCAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: KRSRSIRPGQQV*LTSKVPETADW Trigger: CCAGTCTGCAGTCTCCGGCACTTTGCTTGTGAGCAAAACCTGCTGTCCCGGCCGGATGGATCTGCTTCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079634.8 ENSMUST00000205743.2 ENSMUST00000205966.2 ENSMUST00000206561.2 |
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