Pregenerated sensors for EXOSC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034259Ensembl transcript IDs: ENSMUST00000059045.8, ENSMUST00000230512.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCCAGGGCGAGCTGGGGCCCTCCAGCTGCTTCCTCCACGTGGCTaGGGTCCGCTAGTGCTGTGCCATCCACAAAGCCAGCTGAACATG | + |
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Preference number: 1 (lower is better) Translates to: GPGRAGALQLLPPRG*GPLVLCHPQSQLNM Trigger: CATGTTCAGCTGGCTTTGTGGATGGCACAGCACTAGCGGACCTCAGCCACGTGGAGGAAGCAGCTGGAGGGCCCCAGCTCGCCCTGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR GCA 90 bp | GCCGCCTGGGCAGCAGCCTCTAGCACCTGCTCCAAGTGGTCTTCGTaGAGCCTCGAGTCCATCTCAAGCAGTGCGATCTGGCCGGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: AAWAAASSTCSKWSS*SLESISSSAIWPEA Trigger: CGCCTCCGGCCAGATCGCACTGCTTGAGATGGACTCGAGGCTGCACGAAGACCACTTGGAGCAGGTGCTAGAGGCTGCTGCCCAGGCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR GCA 90 bp | GTGGTTGCCACTCAGTCCCCCAGTGAGACAGAGGCCTCCTGCACGTaGTGTCGGACGACAAGGTCCAGCAGAGTGTGCACACCTCGGGCC | + |
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Preference number: 1 (lower is better) Translates to: VVATQSPSETEASCT*CRTTRSSRVCTPRA Trigger: GGCCCGAGGTGTGCACACTCTGCTGGACCTTGTCGTCCGACAGCACGTGCAGGAGGCCTCTGTCTCACTGGGGGACTGAGTGGCAACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR CCA 90 bp | TGTCGGACGACAAGGTCCAGCAGAGTGTGCACACCTCGGGCCGCCTaGGCAGCAGCCTCTAGCACCTGCTCCAAGTGGTCTTCGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: CRTTRSSRVCTPRAA*AAASSTCSKWSSCS Trigger: GCTGCACGAAGACCACTTGGAGCAGGTGCTAGAGGCTGCTGCCCAGGCGGCCCGAGGTGTGCACACTCTGCTGGACCTTGTCGTCCGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR GCA 90 bp | AGAGTGTGCACACCTCGGGCCGCCTGGGCAGCAGCCTCTAGCACCTaGTCCAAGTGGTCTTCGTGCAGCCTCGAGTCCATCTCAAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: RVCTPRAAWAAASST*SKWSSCSLESISSS Trigger: ACTGCTTGAGATGGACTCGAGGCTGCACGAAGACCACTTGGAGCAGGTGCTAGAGGCTGCTGCCCAGGCGGCCCGAGGTGTGCACACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR TCA 90 bp | GCACCTGCACGTAGATGTCGATCTGAGAGCGGGGGTGCAGCTGTGTaGGGATGGCTGCCTCGAAGGTCTGTCGTAGCTGCAGCCCCATCT | + |
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Preference number: 1 (lower is better) Translates to: APARRCRSESGGAAV*GWLPRRSVVAAAPS Trigger: AGATGGGGCTGCAGCTACGACAGACCTTCGAGGCAGCCATCCTCACACAGCTGCACCCCCGCTCTCAGATCGACATCTACGTGCAGGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR GCA 90 bp | AAAGGGGTGGTTGCCACTCAGTCCCCCAGTGAGACAGAGGCCTCCTaGACGTGCTGTCGGACGACAAGGTCCAGCAGAGTGTGCACACCT | + |
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Preference number: 1 (lower is better) Translates to: KGVVATQSPSETEAS*TCCRTTRSSRVCTP Trigger: AGGTGTGCACACTCTGCTGGACCTTGTCGTCCGACAGCACGTGCAGGAGGCCTCTGTCTCACTGGGGGACTGAGTGGCAACCACCCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR TCA 90 bp | GTCTGTCGTAGCTGCAGCCCCATCTCACAAGACTTCCGGTCTCCATaGGGCCTTCGCTTGCGCTCACCTGTGCTGAAGGTGGCTGAACTG | + |
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Preference number: 1 (lower is better) Translates to: VCRSCSPISQDFRSP*GLRLRSPVLKVAEL Trigger: CAGTTCAGCCACCTTCAGCACAGGTGAGCGCAAGCGAAGGCCTCATGGAGACCGGAAGTCTTGTGAGATGGGGCTGCAGCTACGACAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR CCA 90 bp | TGCTGTACAGTAAGGTGTACTCGGGAGAAGAACAGGCCTTTATTCTaGAAAGGGGTGGTTGCCACTCAGTCCCCCAGTGAGACAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: CCTVRCTREKNRPLF*KGVVATQSPSETEA Trigger: GGCCTCTGTCTCACTGGGGGACTGAGTGGCAACCACCCCTTTCCAGAATAAAGGCCTGTTCTTCTCCCGAGTACACCTTACTGTACAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR TCA 90 bp | AGACCCCTGCTCCCTGATCAAACTAGTATAAAAACCCTGCCTAATTaGGGCTCAGGGCTCTCAGCACAAATCTGGTGTGTTGGAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RPLLPDQTSIKTLPN*GSGLSAQIWCVGGV Trigger: GACTCCTCCAACACACCAGATTTGTGCTGAGAGCCCTGAGCCTCAATTAGGCAGGGTTTTTATACTAGTTTGATCAGGGAGCAGGGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGCAGCAGCCTCTAGCACCTGCTCCAAGTGGTCTTCGTGCAGCCTCGAGTGACTTCCGGTCTCCATaGGGCCTTCGCTTGCGCTCA | + |
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Preference number: 2 (lower is better) Translates to: PGQQPLAPAPSGLRAASSDFRSP*GLRLRS Trigger: TGAGCGCAAGCGAAGGCCTCATGGAGACCGGAAGTC...ACTCGAGGCTGCACGAAGACCACTTGGAGCAGGTGCTAGAGGCTGCTGCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR CCA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGAGGGCCAGGGCGAGCTaGGGCCCTCCAGCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: PTSPRRNCPGPEPIREIERARAS*GPPAAS Trigger: GGAAGCAGCTGGAGGGCCCCAGCTCGCCCTGGCCCT...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGAGACAGAGGCCTCCTGCACGTGCTGTCGGACGACAAGGTCCAGCAGATGCGCTCACCTGTGCTaGAGGTGGCTGAACTGTACT | + |
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Preference number: 2 (lower is better) Translates to: PSETEASCTCCRTTRSSRCAHLC*RWLNCT Trigger: AGTACAGTTCAGCCACCTTCAGCACAGGTGAGCGCA...TCTGCTGGACCTTGTCGTCCGACAGCACGTGCAGGAGGCCTCTGTCTCACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAACACCTCGGGCCGCCTaGGCAGCAGCCTCTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: PPTSPRRNCPGPEPIREITPRAA*AAASST Trigger: GGTGCTAGAGGCTGCTGCCCAGGCGGCCCGAGGTGT...TATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCCAAGTGGTCTTCGTGCAGCCTCGAGTCCATCTCAAGCAGTGCGATCTGGCTGCTTCCTCCACGTaGCTGAGGTCCGCTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LLQVVFVQPRVHLKQCDLAASST*LRSASA Trigger: AGCACTAGCGGACCTCAGCCACGTGGAGGAAGCAGC...CAGATCGCACTGCTTGAGATGGACTCGAGGCTGCACGAAGACCACTTGGAGCAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR CAA 90 bp | GGTGTACTCGGGAGAAGAACAGGCCTTTATTCTGGAAAGGGGTGGTaGCCACTCAGTCCCCCAGTGAGACAGAGGCCTCCTGCACGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GVLGRRTGLYSGKGW*PLSPPVRQRPPARA Trigger: AGCACGTGCAGGAGGCCTCTGTCTCACTGGGGGACTGAGTGGCAACCACCCCTTTCCAGAATAAAGGCCTGTTCTTCTCCCGAGTACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGTGCAACCTCGGCCTTGTGCTCCTGTCCCTGATGGGCTGTGTAAGCATGTGTGTTGGAGGAGTCTaGGGTCCAAGCTTAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AECNLGLVLLSLMGCVSMCVGGV*GPSLRV Trigger: CACCCTTAAGCTTGGACCTCAGACTCCTCCAACACA...CATGCTTACACAGCCCATCAGGGACAGGAGCACAAGGCCGAGGTTGCACTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCACGTGGCTGAGGTCCGCTAGTGCTGTGCCATCCACAAAGCCAGCTGAATGCATTCACACATGCTaGGTAGGTCCCACCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSTWLRSASAVPSTKPAECIHTC*VGPTIC Trigger: GCAGATGGTGGGACCTACGCAGCATGTGTGAATGCA...TTCAGCTGGCTTTGTGGATGGCACAGCACTAGCGGACCTCAGCCACGTGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGAGTCCATCTCAAGCAGTaGGATCTGGCCGGAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: TSPRRNCPGPEPIREIEGVHLKQ*DLAGGG Trigger: CCCGCCTCCGGCCAGATCGCACTGCTTGAGATGGAC...TCCCTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGTGCAACCTCGGCCTTGTGCTCCTGTCCCTGATGGGCTGTGTAAGCATGTGTGCTGAAGGTGGCTaGACTGTACTGACAGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: AECNLGLVLLSLMGCVSMCAEGG*TVLTVH Trigger: GTGAACTGTCAGTACAGTTCAGCCACCTTCAGCACA...CATGCTTACACAGCCCATCAGGGACAGGAGCACAAGGCCGAGGTTGCACTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR GCA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGCAGGCACAACAGGTaGACCCTTGCTCTTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: PTSPRRNCPGPEPIREIEGRHNR*TLALPS Trigger: GCTAGGAAGAGCAAGGGTGCACCTGTTGTGCCTGCC...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATGTGGCTGAACTGTACTaGCAGTTCACTAGAGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: TTDKSKKKLPWARANQGNVAELY*QFTRAR Trigger: CCGGGCTCTAGTGAACTGTCAGTACAGTTCAGCCAC...ATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGTGTGTTGGAGGAGTCTaGGGTCCAAGCTTAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PTSPRRNCPGPEPIREIECVGGV*GPSLRV Trigger: CACCCTTAAGCTTGGACCTCAGACTCCTCCAACACA...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATACCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGAAAACCCTGCCTAATTaGGGCTCAGGGCTCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EIPPTSPRRNCPGPEPIRKTLPN*GSGLSA Trigger: TGCTGAGAGCCCTGAGCCTCAATTAGGCAGGGTTTT...CCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGTATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR GCA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGAGTCCAAGAAGAAACTaGCCTGGGCCAGAGCCAATC | + |
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Preference number: 2 (lower is better) Translates to: PTSPRRNCPGPEPIREIESPRRN*PGPEPI Trigger: GATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACT...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATCTTAGCTGGAGGACTTaGGTGACCAACATAGGCGAA | + |
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Preference number: 2 (lower is better) Translates to: TTDKSKKKLPWARANQGNLSWRT*VTNIGE Trigger: TTCGCCTATGTTGGTCACTCAAGTCCTCCAGCTAAG...ATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR TCA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGAAGCTGATTCCAACTTaGGTTTGTTGGTCCCCGGTT | + |
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Preference number: 2 (lower is better) Translates to: PTSPRRNCPGPEPIREIEKLIPT*VCWSPV Trigger: AACCGGGGACCAACAAACTCAAGTTGGAATCAGCTT...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGACGGTTACAGATAAATTaGTCATCACTGACCAAACCC | + |
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Preference number: 2 (lower is better) Translates to: TSPRRNCPGPEPIREIEGRLQIN*SSLTKP Trigger: GGGTTTGGTCAGTGATGAGCAATTTATCTGTAACCG...TCCCTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR GCA 72 bp | TGCACGTGCTGTCGGACGACAAGGTCCAGCAGAGTGTaGACACCTCGGGCCGCCTGGGCAGCAGCCTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: CTCCRTTRSSRV*TPRAAWAAASS Trigger: GCTAGAGGCTGCTGCCCAGGCGGCCCGAGGTGTGCACACTCTGCTGGACCTTGTCGTCCGACAGCACGTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR CCA 72 bp | ACAAGGTCCAGCAGAGTGTGCACACCTCGGGCCGCCTaGGCAGCAGCCTCTAGCACCTGCTCCAAGTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: TRSSRVCTPRAA*AAASSTCSKWS Trigger: AGACCACTTGGAGCAGGTGCTAGAGGCTGCTGCCCAGGCGGCCCGAGGTGTGCACACTCTGCTGGACCTTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR GCA 72 bp | ACTCAGTCCCCCAGTGAGACAGAGGCCTCCTGCACGTaGTGTCGGACGACAAGGTCCAGCAGAGTGTGCACA | + |
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Preference number: 3 (lower is better) Translates to: TQSPSETEASCT*CRTTRSSRVCT Trigger: TGTGCACACTCTGCTGGACCTTGTCGTCCGACAGCACGTGCAGGAGGCCTCTGTCTCACTGGGGGACTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR GCA 72 bp | GCAGCAGCCTCTAGCACCTGCTCCAAGTGGTCTTCGTaGAGCCTCGAGTCCATCTCAAGCAGTGCGATCTGG | + |
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Preference number: 3 (lower is better) Translates to: AAASSTCSKWSS*SLESISSSAIW Trigger: CCAGATCGCACTGCTTGAGATGGACTCGAGGCTGCACGAAGACCACTTGGAGCAGGTGCTAGAGGCTGCTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR CAA 90 bp | ACCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATCATCGAGATACCTCTTaGTGCCGGGCGGTGGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: TTDKSKKKLPWARANQGNHRDTS*CRAVVA Trigger: TGCCACCACCGCCCGGCACAAAGAGGTATCTCGATG...ATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR CCA 72 bp | CTCGGGAGAAGAACAGGCCTTTATTCTGGAAAGGGGTaGTTGCCACTCAGTCCCCCAGTGAGACAGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LGRRTGLYSGKG*LPLSPPVRQRP Trigger: AGGCCTCTGTCTCACTGGGGGACTGAGTGGCAACCACCCCTTTCCAGAATAAAGGCCTGTTCTTCTCCCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR CAA 90 bp | CATACAAAGTCCCGCATAGGTATCCCAGCATCCATCACTGCTAGCGTGGCTGCAGGTCCCACCATCTGCTaGCAGCACCTGCACGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: HTKSRIGIPASITASVAAGPTIC*QHLHVD Trigger: ATCTACGTGCAGGTGCTGCAAGCAGATGGTGGGACC...TGCAGCCACGCTAGCAGTGATGGATGCTGGGATACCTATGCGGGACTTTGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR TCA 72 bp | GGTCTCCATGAGGCCTTCGCTTGCGCTCACCTGTGCTaGAGGTGGCTGAACTGTACTGACAGTTCACTAGAG | + |
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Preference number: 3 (lower is better) Translates to: GLHEAFACAHLC*RWLNCTDSSLE Trigger: CTCTAGTGAACTGTCAGTACAGTTCAGCCACCTTCAGCACAGGTGAGCGCAAGCGAAGGCCTCATGGAGACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR GCA 72 bp | GGCTGCATTCACACATGCTGCGTAGGTCCCACCATCTaGTTGCAGCACCTGCACGTAGATGTCGATCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: GCIHTCCVGPTI*LQHLHVDVDLR Trigger: TCTCAGATCGACATCTACGTGCAGGTGCTGCAAGCAGATGGTGGGACCTACGCAGCATGTGTGAATGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR CCA 72 bp | GTAAGGTGTACTCGGGAGAAGAACAGGCCTTTATTCTaGAAAGGGGTGGTTGCCACTCAGTCCCCCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: VRCTREKNRPLF*KGVVATQSPSE Trigger: CTCACTGGGGGACTGAGTGGCAACCACCCCTTTCCAGAATAAAGGCCTGTTCTTCTCCCGAGTACACCTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| 3UTR-3UTR CAA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGTCCAACTTGAGTTTGTaGGTCCCCGGTTTGAACTGT | + |
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Preference number: 3 (lower is better) Translates to: PTSPRRNCPGPEPIREIESNLSL*VPGLNC Trigger: ACAGTTCAAACCGGGGACCAACAAACTCAAGTTGGA...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR TCA 72 bp | CTTAGGGACTGCACTATAAACTGCGCTGTAGGGCCCTaGGCAGCTTTTAAGTGCTGTACAGTAAGGTGTACT | + |
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Preference number: 3 (lower is better) Translates to: LRDCTINCAVGP*AAFKCCTVRCT Trigger: AGTACACCTTACTGTACAGCACTTAAAAGCTGCTCAGGGCCCTACAGCGCAGTTTATAGTGCAGTCCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATAAATTGCTCATCACTGACCAAACCCTGTGCATCGAGATACCTCTTTGTGCACAAATCTGGTGTGTaGGAGGAGTCTGAGGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: QINCSSLTKPCASRYLFVHKSGV*EESEVQ Trigger: TTGGACCTCAGACTCCTCCAACACACCAGATTTGTG...CACAAAGAGGTATCTCGATGCACAGGGTTTGGTCAGTGATGAGCAATTTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR GCA 72 bp | TTAATAGAAATACCACCGACAAGTCCAAGAAGAAACTaGCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LIEIPPTSPRRN*PGPEPIREIEG Trigger: TCCCTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGTATTTCTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS-3UTR GCA 90 bp | GCCTCCTGCACGTGCTGTCGGACGACAAGGTCCAGCAGAGTGTGCACACCTCGGGCCGAGCCATCGGCCTaGGCAAACACGCCCATCCGC | + |
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Preference number: 4 (lower is better) Translates to: ASCTCCRTTRSSRVCTPRAEPSA*ANTPIR Trigger: GCGGATGGGCGTGTTTGCGCAGGCCGATGGCTCGGC...CCGAGGTGTGCACACTCTGCTGGACCTTGTCGTCCGACAGCACGTGCAGGAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS-3UTR GCA 90 bp | ACAAGACTTCCGGTCTCCATGAGGCCTTCGCTTGCGCTCACCTGTGCTGAAGGTTCCGCGCCTGGATCTTaGGCAGCTCCCCCGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TRLPVSMRPSLALTCAEGSAPGS*AAPPRG Trigger: GCCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGA...ACCTTCAGCACAGGTGAGCGCAAGCGAAGGCCTCATGGAGACCGGAAGTCTTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGTGCAACCTCGGCCTTGTGCTCCTGTCCCTGATGGGCTGTGTAAGCATGGCCGAGCCATCGGCCTaGGCAAACACGCCCATCCGC | + |
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Preference number: 4 (lower is better) Translates to: AECNLGLVLLSLMGCVSMAEPSA*ANTPIR Trigger: GCGGATGGGCGTGTTTGCGCAGGCCGATGGCTCGGC...CATGCTTACACAGCCCATCAGGGACAGGAGCACAAGGCCGAGGTTGCACTCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS-3UTR CCA 90 bp | CCCAGTGAGACAGAGGCCTCCTGCACGTGCTGTCGGACGACAAGGTCCAGCAGACCACCGCCAGTGCCTTaGTGTTGCCCTGCTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: PSETEASCTCCRTTRSSRPPPVP*CCPARC Trigger: ACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGG...TCTGCTGGACCTTGTCGTCCGACAGCACGTGCAGGAGGCCTCTGTCTCACTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS-3UTR GCA 90 bp | ACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGATCCGCGCCTGGATCTTaGGCAGCTCCCCCGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TSPRRNCPGPEPIREIEGSAPGS*AAPPRG Trigger: GCCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGA...TCCCTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS-3UTR CCA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGACGCCCATCCGCGCCTaGATCTTGCGCAGCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: PTSPRRNCPGPEPIREIETPIRA*ILRSSP Trigger: GGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGT...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS-3UTR GCA 90 bp | CCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGTCCATCTCAAGCAGTaGGATCTGGCCGGAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PPTSPRRNCPGPEPIREIVHLKQ*DLAGGG Trigger: CCCGCCTCCGGCCAGATCGCACTGCTTGAGATGGAC...TATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR CCA 90 bp | GAAATACCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGCCACCGCCAGTGCCTTaGTGTTGCCCTGCTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: EIPPTSPRRNCPGPEPIRPPPVP*CCPARC Trigger: ACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGG...CCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGTATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS-3UTR CCA 90 bp | GATAAATTGCTCATCACTGACCAAACCCTGTGCATCGAGATACCTCTTTGTGCCAGGGCCAGGGCGAGCTaGGGCCCTCCAGCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DKLLITDQTLCIEIPLCARARAS*GPPAAS Trigger: GGAAGCAGCTGGAGGGCCCCAGCTCGCCCTGGCCCT...GGCACAAAGAGGTATCTCGATGCACAGGGTTTGGTCAGTGATGAGCAATTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTTGGAGGAGTCTGAGGTCCAAGCTTAAGGGTGAAGAAAGTCTGAATTCGACACCTCGGGCCGCCTaGGCAGCAGCCTCTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: VCWRSLRSKLKGEESLNSTPRAA*AAASST Trigger: GGTGCTAGAGGCTGCTGCCCAGGCGGCCCGAGGTGT...CGAATTCAGACTTTCTTCACCCTTAAGCTTGGACCTCAGACTCCTCCAACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| 3UTR CAA 72 bp | GGGAGAAGAACAGGCCTTTATTCTGGAAAGGGGTGGTaGCCACTCAGTCCCCCAGTGAGACAGAGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GRRTGLYSGKGW*PLSPPVRQRPP Trigger: AGGAGGCCTCTGTCTCACTGGGGGACTGAGTGGCAACCACCCCTTTCCAGAATAAAGGCCTGTTCTTCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS-3UTR GCA 90 bp | ACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGAGTAGACCACCGCCAGTaGCTTGGTGTTGCCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSPRRNCPGPEPIREIEGVDHRQ*LGVALL Trigger: GAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTAC...TCCCTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| 3UTR CAA 72 bp | TGCATTCACACATGCTGCGTAGGTCCCACCATCTGCTaGCAGCACCTGCACGTAGATGTCGATCTGAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: CIHTCCVGPTIC*QHLHVDVDLRA Trigger: CGCTCTCAGATCGACATCTACGTGCAGGTGCTGCAAGCAGATGGTGGGACCTACGCAGCATGTGTGAATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS-3UTR TCA 90 bp | CCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGTGCGCTCACCTGTGCTaGAGGTGGCTGAACTGTACT | + |
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Preference number: 4 (lower is better) Translates to: PTSPRRNCPGPEPIREIECAHLC*RWLNCT Trigger: AGTACAGTTCAGCCACCTTCAGCACAGGTGAGCGCA...CTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR TCA 90 bp | GCTGAGTGCAACCTCGGCCTTGTGCTCCTGTCCCTGATGGGCTGTGTAAGCATGATCCACAAAGCCAGCTaGACATGCGCATACAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: AECNLGLVLLSLMGCVSMIHKAS*TCAYKV Trigger: GACTTTGTATGCGCATGTTCAGCTGGCTTTGTGGAT...CATGCTTACACAGCCCATCAGGGACAGGAGCACAAGGCCGAGGTTGCACTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR GCA 90 bp | ACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGAGCAGCCTCTAGCACCTaGTCCAAGTGGTCTTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TSPRRNCPGPEPIREIEGAASST*SKWSSC Trigger: GCACGAAGACCACTTGGAGCAGGTGCTAGAGGCTGC...TCCCTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR TCA 90 bp | AATTGCTCATCACTGACCAAACCCTGTGCATCGAGATACCTCTTTGTGCCGGGCGTGGCTGAACTGTACTaGCAGTTCACTAGAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: NCSSLTKPCASRYLFVPGVAELY*QFTRAR Trigger: CCGGGCTCTAGTGAACTGTCAGTACAGTTCAGCCAC...GCCCGGCACAAAGAGGTATCTCGATGCACAGGGTTTGGTCAGTGATGAGCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR GCA 90 bp | GTGTGTTGGAGGAGTCTGAGGTCCAAGCTTAAGGGTGAAGAAAGTCTGAATTCGGTAGACCACCGCCAGTaGCTTGGTGTTGCCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCWRSLRSKLKGEESLNSVDHRQ*LGVALL Trigger: GAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTAC...CGAATTCAGACTTTCTTCACCCTTAAGCTTGGACCTCAGACTCCTCCAACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS-3UTR TCA 90 bp | CCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATATGTGCTGAAGGTGGCTaGACTGTACTGACAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PPTSPRRNCPGPEPIREICAEGG*TVLTVH Trigger: GTGAACTGTCAGTACAGTTCAGCCACCTTCAGCACA...TATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTCTGAGGTCCAAGCTTAAGGGTGAAGAAAGTCTGAATTCGCATGCAGATGACTTCCGGTCTCCATaGGGCCTTCGCTTGCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RSLRSKLKGEESLNSHADDFRSP*GLRLRS Trigger: TGAGCGCAAGCGAAGGCCTCATGGAGACCGGAAGTC...ATCTGCATGCGAATTCAGACTTTCTTCACCCTTAAGCTTGGACCTCAGACTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR CCA 90 bp | ACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATAGAGGGACCATCACTGCTAGCGTaGCTGCATTCACACATGCTG | + |
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Preference number: 4 (lower is better) Translates to: TSPRRNCPGPEPIREIEGPSLLA*LHSHML Trigger: CAGCATGTGTGAATGCAGCCACGCTAGCAGTGATGG...TCCCTCTATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTCTGAGGTCCAAGCTTAAGGGTGAAGAAAGTCTGAATTCGCATGCAGATGCTGCTTCCTCCACGTaGCTGAGGTCCGCTAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RSLRSKLKGEESLNSHADAASST*LRSASA Trigger: AGCACTAGCGGACCTCAGCCACGTGGAGGAAGCAGC...ATCTGCATGCGAATTCAGACTTTCTTCACCCTTAAGCTTGGACCTCAGACTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR GCA 90 bp | CAGATAAATTGCTCATCACTGACCAAACCCTGTGCATCGAGATACCTCTTTGTGCCAGTGCCTTGGTGTTaGCCTGCTCGATGTAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: QINCSSLTKPCASRYLFVPVPWC*PARCKP Trigger: CGGCTTACATCGAGCAGGGCAACACCAAGGCACTGG...CACAAAGAGGTATCTCGATGCACAGGGTTTGGTCAGTGATGAGCAATTTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS-3UTR GCA 90 bp | CAGATAAATTGCTCATCACTGACCAAACCCTGTGCATCGAGATACCTCTTTGTGGGCTGCATTCACACATaGTGCGTAGGTCCCACCATC | + |
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Preference number: 4 (lower is better) Translates to: QINCSSLTKPCASRYLFVGCIHT*CVGPTI Trigger: GATGGTGGGACCTACGCAGCATGTGTGAATGCAGCC...CACAAAGAGGTATCTCGATGCACAGGGTTTGGTCAGTGATGAGCAATTTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR GCA 90 bp | CAGATAAATTGCTCATCACTGACCAAACCCTGTGCATCGAGATACCTCTTTGTGTGCATTCACACATGCTaGGTAGGTCCCACCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: QINCSSLTKPCASRYLFVCIHTC*VGPTIC Trigger: GCAGATGGTGGGACCTACGCAGCATGTGTGAATGCA...CACAAAGAGGTATCTCGATGCACAGGGTTTGGTCAGTGATGAGCAATTTATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR CAA 90 bp | CCTGCACGTGCTGTCGGACGACAAGGTCCAGCAGAGTGTGCACACCTCGGGCCGATCCGCGCCTGGATCTaGCGCAGCTCCCCCGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: PARAVGRQGPAECAHLGPIRAWI*RSSPAR Trigger: CCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGAT...CGGCCCGAGGTGTGCACACTCTGCTGGACCTTGTCGTCCGACAGCACGTGCAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS GCA 90 bp | CCGAGCCATCGGCCTGCGCAAACACGCCCATCCGCGCCTGGATCTTaGGCAGCTCCCCCGCGCGGCGACCGTCTATCCGGTAACCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: PSHRPAQTRPSAPGS*AAPPRGDRLSGNPD Trigger: ATCAGGGTTACCGGATAGACGGTCGCCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTTGCGCAGGCCGATGGCTCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS GCA 90 bp | CGGGAGCCCCGGATTCGCCTCGTGCGGCCCGTAGACCACCGCCAGTaGCTTGGTGTTGCCCTGCTCGATGTAAGCCGAGCCATCGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: REPRIRLVRPVDHRQ*LGVALLDVSRAIGL Trigger: CAGGCCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGGCGAATCCGGGGCTCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS GCA 90 bp | AGACCGGGAGCCCCGGATCTCGTGCGGCCCGTAGACCACCGCCAGTaGCTTGGTGTTGCCCTGCTCGATGTAAGCCGAGCCATCGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RPGAPDLVRPVDHRQ*LGVALLDVSRAIGL Trigger: CAGGCCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGATCCGGGGCTCCCGGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS CCA 90 bp | GGGAGCCCCGGATCTCGTGCGGCCCGTAGACCACCGCCAGTGCCTTaGTGTTGCCCTGCTCGATGTAAGCCGAGCCATCGGCCTGCGCAA | + |
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Preference number: 5 (lower is better) Translates to: GSPGSRAARRPPPVP*CCPARCKPSHRPAQ Trigger: TTGCGCAGGCCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGATCCGGGGCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS CCA 90 bp | GCCCCGGATTCGCCTCGTGCGGCCCGTAGACCACCGCCAGTGCCTTaGTGTTGCCCTGCTCGATGTAAGCCGAGCCATCGGCCTGCGCAA | + |
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Preference number: 5 (lower is better) Translates to: APDSPRAARRPPPVP*CCPARCKPSHRPAQ Trigger: TTGCGCAGGCCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGGCGAATCCGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS GCA 90 bp | CCCGGATCTCGTGCGGCCCGTAGACCACCGCCAGTGCCTTGGTGTTaGCCTGCTCGATGTAAGCCGAGCCATCGGCCTGCGCAAACACGC | + |
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Preference number: 5 (lower is better) Translates to: PGSRAARRPPPVPWC*PARCKPSHRPAQTR Trigger: GCGTGTTTGCGCAGGCCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGATCCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS GCA 90 bp | GATTCGCCTCGTGCGGCCCGTAGACCACCGCCAGTGCCTTGGTGTTaGCCTGCTCGATGTAAGCCGAGCCATCGGCCTGCGCAAACACGC | + |
|
Preference number: 5 (lower is better) Translates to: DSPRAARRPPPVPWC*PARCKPSHRPAQTR Trigger: GCGTGTTTGCGCAGGCCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGGCGAATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS TCA 90 bp | GGCCTTCGCTTGCGCTCACCTGTGCTGAAGGTGGCTGAACTGTACTaGCAGTTCACTAGAGCCCGGTCAGGCAGGGCTCGAGACCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRLRSPVLKVAELY*QFTRARSGRARDRE Trigger: CTCCCGGTCTCGAGCCCTGCCTGACCGGGCTCTAGTGAACTGTCAGTACAGTTCAGCCACCTTCAGCACAGGTGAGCGCAAGCGAAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR CAA 90 bp | GAAATACCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGATCCGCGCCTGGATCTaGCGCAGCTCCCCCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EIPPTSPRRNCPGPEPIRIRAWI*RSSPAR Trigger: CCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGAT...CCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGTATTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS TCA 90 bp | AAGACTTCCGGTCTCCATGAGGCCTTCGCTTGCGCTCACCTGTGCTaGAGGTGGCTGAACTGTACTGACAGTTCACTAGAGCCCGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: KTSGLHEAFACAHLC*RWLNCTDSSLEPGQ Trigger: CTGACCGGGCTCTAGTGAACTGTCAGTACAGTTCAGCCACCTTCAGCACAGGTGAGCGCAAGCGAAGGCCTCATGGAGACCGGAAGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS-3UTR CAA 90 bp | ACCACCGACAAGTCCAAGAAGAAACTGCCCTGGGCCAGAGCCAATCAGGGAAATGGTCCCACCATCTGCTaGCAGCACCTGCACGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TTDKSKKKLPWARANQGNGPTIC*QHLHVD Trigger: ATCTACGTGCAGGTGCTGCAAGCAGATGGTGGGACC...ATTTCCCTGATTGGCTCTGGCCCAGGGCAGTTTCTTCTTGGACTTGTCGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS GCA 72 bp | CGGCCTGCGCAAACACGCCCATCCGCGCCTGGATCTTaGGCAGCTCCCCCGCGCGGCGACCGTCTATCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPAQTRPSAPGS*AAPPRGDRLSG Trigger: ACCGGATAGACGGTCGCCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTTGCGCAGGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS CCA 72 bp | GAGCCATCGGCCTGCGCAAACACGCCCATCCGCGCCTaGATCTTGCGCAGCTCCCCCGCGCGGCGACCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: EPSACANTPIRA*ILRSSPARRPS Trigger: AGACGGTCGCCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTTGCGCAGGCCGATGGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS CAA 72 bp | TCGGCCTGCGCAAACACGCCCATCCGCGCCTGGATCTaGCGCAGCTCCCCCGCGCGGCGACCGTCTATCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SACANTPIRAWI*RSSPARRPSIR Trigger: CCGGATAGACGGTCGCCGCGCGGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTTGCGCAGGCCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS GCA 72 bp | CGTGCGGCCCGTAGACCACCGCCAGTGCCTTGGTGTTaGCCTGCTCGATGTAAGCCGAGCCATCGGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RAARRPPPVPWC*PARCKPSHRPA Trigger: CGCAGGCCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059045.8 ENSMUST00000230512.2 |
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| CDS GCA 72 bp | GCCCCGGATCTCGTGCGGCCCGTAGACCACCGCCAGTaGCTTGGTGTTGCCCTGCTCGATGTAAGCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: APDLVRPVDHRQ*LGVALLDVSRA Trigger: GGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGATCCGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS GCA 72 bp | CGGATTCGCCTCGTGCGGCCCGTAGACCACCGCCAGTaGCTTGGTGTTGCCCTGCTCGATGTAAGCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RIRLVRPVDHRQ*LGVALLDVSRA Trigger: GGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGGCGAATCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS CCA 72 bp | TCGCCTCGTGCGGCCCGTAGACCACCGCCAGTGCCTTaGTGTTGCCCTGCTCGATGTAAGCCGAGCCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRAARRPPPVP*CCPARCKPSHR Trigger: CCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230512.2 |
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| CDS CCA 72 bp | GGATCTCGTGCGGCCCGTAGACCACCGCCAGTGCCTTaGTGTTGCCCTGCTCGATGTAAGCCGAGCCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRAARRPPPVP*CCPARCKPSHR Trigger: CCGATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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| CDS TCA 72 bp | TTGCGCTCACCTGTGCTGAAGGTGGCTGAACTGTACTaGCAGTTCACTAGAGCCCGGTCAGGCAGGGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: LRSPVLKVAELY*QFTRARSGRAR Trigger: TCGAGCCCTGCCTGACCGGGCTCTAGTGAACTGTCAGTACAGTTCAGCCACCTTCAGCACAGGTGAGCGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059045.8 |
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