Pregenerated sensors for EXOSC3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028322

Ensembl transcript IDs: ENSMUST00000030003.10, ENSMUST00000152056.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCCTCGTGGTCCGGCAGCACCAGCTCCTCCCCGGGGAGAACCACCTaGTTCAGCACCTTGTGCACGGCCCGTGCTCGGCAGCCCGCCACC	+
Preference number: 5 (lower is better) Translates to: SSWSGSTSSSPGRTT*FSTLCTARARQPAT Trigger: GGTGGCGGGCTGCCGAGCACGGGCCGTGCACAAGGTGCTGAATCAGGTGGTTCTCCCCGGGGAGGAGCTGGTGCTGCCGGACCACGAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030003.10
CDS TCA 90 bp	CGCCGCCTCCGCTGGGCTCCTTGTGACGCAGGCGGCCACACTTGGTaGCCAGCAGACGGTCCCCGCAGCGTCGCAAACCTGGGCCACACA	+
Preference number: 5 (lower is better) Translates to: RRLRWAPCDAGGHTW*PADGPRSVANLGHT Trigger: TGTGTGGCCCAGGTTTGCGACGCTGCGGGGACCGTCTGCTGGTCACCAAGTGTGGCCGCCTGCGTCACAAGGAGCCCAGCGGAGGCGGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030003.10
CDS CCA 90 bp	GCCACACTTGGTGACCAGCAGACGGTCCCCGCAGCGTCGCAAACCTaGGCCACACACTACGCGCAGCCTCGGGCGCGCACCCGCATTCAG	+
Preference number: 5 (lower is better) Translates to: ATLGDQQTVPAASQT*ATHYAQPRARTRIQ Trigger: CTGAATGCGGGTGCGCGCCCGAGGCTGCGCGTAGTGTGTGGCCCAGGTTTGCGACGCTGCGGGGACCGTCTGCTGGTCACCAAGTGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030003.10
CDS CCA 72 bp	GGTGACCAGCAGACGGTCCCCGCAGCGTCGCAAACCTaGGCCACACACTACGCGCAGCCTCGGGCGCGCACC	+
Preference number: 6 (lower is better) Translates to: GDQQTVPAASQT*ATHYAQPRART Trigger: GGTGCGCGCCCGAGGCTGCGCGTAGTGTGTGGCCCAGGTTTGCGACGCTGCGGGGACCGTCTGCTGGTCACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030003.10
CDS GCA 72 bp	GAGAACCACCTGATTCAGCACCTTGTGCACGGCCCGTaGTCGGCAGCCCGCCACCGACTCCGGTCCCGCGGA	+
Preference number: 6 (lower is better) Translates to: ENHLIQHLVHGP*SAARHRLRSRG Trigger: TCCGCGGGACCGGAGTCGGTGGCGGGCTGCCGAGCACGGGCCGTGCACAAGGTGCTGAATCAGGTGGTTCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030003.10
CDS TCA 72 bp	TCCGGCAGCACCAGCTCCTCCCCGGGGAGAACCACCTaGTTCAGCACCTTGTGCACGGCCCGTGCTCGGCAG	+
Preference number: 6 (lower is better) Translates to: SGSTSSSPGRTT*FSTLCTARARQ Trigger: CTGCCGAGCACGGGCCGTGCACAAGGTGCTGAATCAGGTGGTTCTCCCCGGGGAGGAGCTGGTGCTGCCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030003.10
CDS GCA 72 bp	CTTTCACAGGTACATACTCAGCACCCGCACCCACGGTaGTGTCTTCAACCTCGAGTACTCTCCGGACGGGTA	+
Preference number: 6 (lower is better) Translates to: LSQVHTQHPHPR*CLQPRVLSGRV Trigger: TACCCGTCCGGAGAGTACTCGAGGTTGAAGACAGCACCGTGGGTGCGGGTGCTGAGTATGTACCTGTGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152056.2

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