Pregenerated sensors for EXOSC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039356Ensembl transcript IDs: ENSMUST00000038474.14, ENSMUST00000125883.8, ENSMUST00000137156.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCAGAACAGAAAGACAGGCCTGGCTCTGCAGCCCCACTGCAGGTaGGGAATGTGTTTGTCAGATGCTCCTTGGGGACCACATGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SQNRKTGLALQPHCR*GMCLSDAPWGPHGR Trigger: TCTGCCATGTGGTCCCCAAGGAGCATCTGACAAACACATTCCTCACCTGCAGTGGGGCTGCAGAGCCAGGCCTGTCTTTCTGTTCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR CCA 90 bp | TCTCTCCAACCACACACTTGTGCATTAAAGGAGACAGAGCGGAAGTaGAAAGAGACCATTCTCGATGGCACTGCCATGTCTTTGTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: SLQPHTCALKETERK*KETILDGTAMSLSL Trigger: CAAAGACAAAGACATGGCAGTGCCATCGAGAATGGTCTCTTTCCACTTCCGCTCTGTCTCCTTTAATGCACAAGTGTGTGGTTGGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAGACAGGCCTGGCTCTGCAGCCCCACTGCAGGTGAGGAATGTGTTTGTAACTGGCCCAGGGGGTaGCCAGTCCCATCCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TERQAWLCSPTAGEECVCNWPRG*PVPSFS Trigger: GCTGAAGGATGGGACTGGGCACCCCCTGGGCCAGTT...ACAAACACATTCCTCACCTGCAGTGGGGCTGCAGAGCCAGGCCTGTCTTTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR-3UTR CCA 90 bp | TCCTCGTGTGCAGAGAAACAGCTCCATCCGAGAACACAGCCTGGACCTCCGCCTGCAAGAAGCCTCTCATaGCCAGCTCATCCTCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSCAEKQLHPRTQPGPPPARSLS*PAHPPQ Trigger: CTGCGGAGGATGAGCTGGCCATGAGAGGCTTCTTGC...AGGCGGAGGTCCAGGCTGTGTTCTCGGATGGAGCTGTTTCTCTGCACACGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCCTCGTGTGCAGAGAAACAGCTCCATCCGAGAACACAGCCTGGACCTCTTCCACCTCTTCTGTTaGACCTCTGTGATTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QAPRVQRNSSIREHSLDLFHLFC*TSVILP Trigger: GGGGAGAATCACAGAGGTTCAACAGAAGAGGTGGAA...GAGGTCCAGGCTGTGTTCTCGGATGGAGCTGTTTCTCTGCACACGAGGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTCGTGTGCAGAGAAACAGCTCCATCCGAGAACACAGCCTGGACCTCCGCTCTGTTGAACCTCTGTaGTTCTCCCCACTACAATGT | + |
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Preference number: 2 (lower is better) Translates to: APRVQRNSSIREHSLDLRSVEPL*FSPLQC Trigger: ACATTGTAGTGGGGAGAATCACAGAGGTTCAACAGA...GCGGAGGTCCAGGCTGTGTTCTCGGATGGAGCTGTTTCTCTGCACACGAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCATAAATTCTCCAAGTTATTCCAAGGTAAGTCAGCATCAGGCCGGGACACTAGACAGGCCTGGCTCTaGAGCCCCACTGCAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SHKFSKLFQGKSASGRDTRQAWL*SPTAGE Trigger: CTCACCTGCAGTGGGGCTGCAGAGCCAGGCCTGTCT...AGTGTCCCGGCCTGATGCTGACTTACCTTGGAATAACTTGGAGAATTTATGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR-3UTR CCA 90 bp | AAGGTAAGTCAGCATCAGGCCGGGACACTGTGCTCTGAAAGACCTAAAACTACTTTTCACTCCCAAAACTaGCCCAGGGGGTGCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: KVSQHQAGTLCSERPKTTFHSQN*PRGCPV Trigger: GACTGGGCACCCCCTGGGCCAGTTTTGGGAGTGAAA...AGTAGTTTTAGGTCTTTCAGAGCACAGTGTCCCGGCCTGATGCTGACTTACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTTTATTCTCATATCCACTTGACTCTGGCCTGACTCCACCACCTTCTCTCCAGCCCCACTGCAGGTaGGGAATGTGTTTGTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LPLFSYPLDSGLTPPPSLQPHCR*GMCLSD Trigger: ATCTGACAAACACATTCCTCACCTGCAGTGGGGCTG...GAGAGAAGGTGGTGGAGTCAGGCCAGAGTCAAGTGGATATGAGAATAAAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR-3UTR CCA 90 bp | CAACCACACACTTGTGCATTAAAGGAGACAGAGCGGAAGTGGAAAGAGACCATTGCACATTTTAGGAAGTaGTCCACTCCTGAGATACAT | + |
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Preference number: 2 (lower is better) Translates to: QPHTCALKETERKWKETIAHFRK*STPEIH Trigger: ATGTATCTCAGGAGTGGACCACTTCCTAAAATGTGC...AATGGTCTCTTTCCACTTCCGCTCTGTCTCCTTTAATGCACAAGTGTGTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR GCA 72 bp | GGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: GFELLTFGRAVG*SYPLSHLTSPP Trigger: GGGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR TCA 72 bp | AGAAAGACAGGCCTGGCTCTGCAGCCCCACTGCAGGTaGGGAATGTGTTTGTCAGATGCTCCTTGGGGACCA | + |
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Preference number: 3 (lower is better) Translates to: RKTGLALQPHCR*GMCLSDAPWGP Trigger: TGGTCCCCAAGGAGCATCTGACAAACACATTCCTCACCTGCAGTGGGGCTGCAGAGCCAGGCCTGTCTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TPDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR-3UTR CAA 90 bp | CCCATATTTCAGGCTCCTCGTGTGCAGAGAAACAGCTCCATCCGAGAACACAGCGAGTCCAGCCTGGAATaGGTCTCTACCTTCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: PIFQAPRVQRNSSIREHSESSLE*VSTFHL Trigger: GAGGTGGAAGGTAGAGACCAATTCCAGGCTGGACTC...GCTGTGTTCTCGGATGGAGCTGTTTCTCTGCACACGAGGAGCCTGAAATATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| 3UTR-3UTR CAA 90 bp | CTAACTGATGAGGTCGCCTTCCTGCAAGAAGCCTCTCATGGCCAGCTCATCCTCCTTCCACCTCTTCTGTaGAACCTCTGTGATTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LTDEVAFLQEASHGQLILLPPLL*NLCDSP Trigger: GGGAGAATCACAGAGGTTCAACAGAAGAGGTGGAAG...GAGGATGAGCTGGCCATGAGAGGCTTCTTGCAGGAAGGCGACCTCATCAGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| 3UTR TCA 72 bp | CATCTCACCAGCCCTCCCTTTATTCTCATATCCACTTaGCTCTGGCCTGACTCCACCACCTTCTCTCCAACC | + |
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Preference number: 3 (lower is better) Translates to: HLTSPPFILIST*LWPDSTTFSPT Trigger: GGTTGGAGAGAAGGTGGTGGAGTCAGGCCAGAGTCAAGTGGATATGAGAATAAAGGGAGGGCTGGTGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR GCA 72 bp | CCTGACTCCACCACCTTCTCTCCAACCACACACTTGTaGATTAAAGGAGACAGAGCGGAAGTGGAAAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: PDSTTFSPTTHL*IKGDRAEVERD Trigger: GTCTCTTTCCACTTCCGCTCTGTCTCCTTTAATGCACAAGTGTGTGGTTGGAGAGAAGGTGGTGGAGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR GCA 72 bp | TATTCCAAGGTAAGTCAGCATCAGGCCGGGACACTGTaGTCTGAAAGACCTAAAACTACTGGGACCCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: YSKVSQHQAGTL*SERPKTTGTQE Trigger: CTCTTGGGTCCCAGTAGTTTTAGGTCTTTCAGAGCACAGTGTCCCGGCCTGATGCTGACTTACCTTGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR CCA 72 bp | CCACACACTTGTGCATTAAAGGAGACAGAGCGGAAGTaGAAAGAGACCATTCTCGATGGCACTGCCATGTCT | + |
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Preference number: 3 (lower is better) Translates to: PHTCALKETERK*KETILDGTAMS Trigger: AGACATGGCAGTGCCATCGAGAATGGTCTCTTTCCACTTCCGCTCTGTCTCCTTTAATGCACAAGTGTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR CCA 72 bp | GGAAATGGAACTTGGGAACTTGCACATTTTAGGAAGTaGTCCACTCCTGAGATACATCCCCAGGTCACCATG | + |
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Preference number: 3 (lower is better) Translates to: GNGTWELAHFRK*STPEIHPQVTM Trigger: CATGGTGACCTGGGGATGTATCTCAGGAGTGGACCACTTCCTAAAATGTGCAAGTTCCCAAGTTCCATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR TCA 72 bp | CCAGGACAGTTTCATGGGGCATTACATTGTGTGGGGTaGTTGGAAGTCATAAATTCTCCAAGTTATTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PGQFHGALHCVG*LEVINSPSYSK Trigger: CTTGGAATAACTTGGAGAATTTATGACTTCCAATCACCCCACACAATGTAATGCCCCATGAAACTGTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR TCA 90 bp | GAGGTCGCCTTCCTGCAAGAAGCCTCTCATGGCCAGCTCATCCTCCGCAGACCTAGCCTGTGTCCGTGGTaGTCGTGTCCCCCGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: EVAFLQEASHGQLILRRPSLCPW*SCPPAP Trigger: TGGTGCCGGGGGACACGATCACCACGGACACAGGCT...AGGTCTGCGGAGGATGAGCTGGCCATGAGAGGCTTCTTGCAGGAAGGCGACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| CDS-3UTR TCA 90 bp | CCAACCACACACTTGTGCATTAAAGGAGACAGAGCGGAAGTGGAAAGAGACCATAGCCTGTGTCCGTGGTaGTCGTGTCCCCCGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: PTTHLCIKGDRAEVERDHSLCPW*SCPPAP Trigger: TGGTGCCGGGGGACACGATCACCACGGACACAGGCT...ATGGTCTCTTTCCACTTCCGCTCTGTCTCCTTTAATGCACAAGTGTGTGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR GCA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCCCTTCATAGCAGTACAGGATaGTGGTGTCGAACAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: RKSSRVLLPTEPSHQPSLHSSTG*WCRTAS Trigger: TGATGCTGTTCGACACCAGCATCCTGTACTGCTATG...AAGGGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR TCA 90 bp | GGCTCCTCGTGTGCAGAGAAACAGCTCCATCCGAGAACACAGCCTGGACCTCCGTGGTTTTCAAGGCTTTaGCACAGATCAGTTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSSCAEKQLHPRTQPGPPWFSRL*HRSVCS Trigger: TGAACAAACTGATCTGTGTCAAAGCCTTGAAAACCA...CGGAGGTCCAGGCTGTGTTCTCGGATGGAGCTGTTTCTCTGCACACGAGGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| CDS-3UTR TCA 90 bp | TGTAAGTACACTGAAGCTGTCTTCAGACACTCCAGAAGAGGGCGCCAGATCTCGGTTACCCAGAATCACTaGGGCACCACATGGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: CKYTEAVFRHSRRGRQISVTQNH*GTTWQV Trigger: GACTTGCCATGTGGTGCCTCAGTGATTCTGGGTAAC...CGAGATCTGGCGCCCTCTTCTGGAGTGTCTGAAGACAGCTTCAGTGTACTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR TCA 90 bp | GGAAGTGGTCCACTCCTGAGATACATCCCCAGGTCACCATGTTTTCTACCAGGAGGCGTGTTTCCAGCATaGTCTCCTCCATTACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: GSGPLLRYIPRSPCFLPGGVFPA*SPPLLP Trigger: CGGAAGTAATGGAGGAGATCATGCTGGAAACACGCC...TCCTGGTAGAAAACATGGTGACCTGGGGATGTATCTCAGGAGTGGACCACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR TCA 90 bp | GCTCTGAAAGACCTAAAACTACTGGGACCCAAGAGCCCAACCCACCATTACCTCTTCCACCTCTTCTGTTaGACCTCTGTGATTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ALKDLKLLGPKSPTHHYLFHLFC*TSVILP Trigger: GGGGAGAATCACAGAGGTTCAACAGAAGAGGTGGAA...GAGGTAATGGTGGGTTGGGCTCTTGGGTCCCAGTAGTTTTAGGTCTTTCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR CAA 72 bp | TGGCCTGACTCCACCACCTTCTCTCCAACCACACACTaGTGCATTAAAGGAGACAGAGCGGAAGTGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: WPDSTTFSPTTH*CIKGDRAEVER Trigger: TCTTTCCACTTCCGCTCTGTCTCCTTTAATGCACAAGTGTGTGGTTGGAGAGAAGGTGGTGGAGTCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR CCA 90 bp | CTCCCTTTATTCTCATATCCACTTGACTCTGGCCTGACTCCACCACCTTCTCTCAGTCCAGCCTGGAATTaGTCTCTACCTTCCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPLFSYPLDSGLTPPPSLSPAWN*SLPSTS Trigger: AGAGGTGGAAGGTAGAGACCAATTCCAGGCTGGACT...GAGAGAAGGTGGTGGAGTCAGGCCAGAGTCAAGTGGATATGAGAATAAAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR CCA 90 bp | AGTCATAAATTCTCCAAGTTATTCCAAGGTAAGTCAGCATCAGGCCGGGACACTGCAAGAAGCCTCTCATaGCCAGCTCATCCTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SHKFSKLFQGKSASGRDTARSLS*PAHPPQ Trigger: CTGCGGAGGATGAGCTGGCCATGAGAGGCTTCTTGC...AGTGTCCCGGCCTGATGCTGACTTACCTTGGAATAACTTGGAGAATTTATGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR CCA 90 bp | CACTGTGCTCTGAAAGACCTAAAACTACTGGGACCCAAGAGCCCAACCCACCATCTTGTGCTCAGGTGTTaGGTAGATCCAGATGAAACC | + |
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Preference number: 4 (lower is better) Translates to: HCALKDLKLLGPKSPTHHLVLRC*VDPDET Trigger: GGTTTCATCTGGATCTACCCAACACCTGAGCACAAG...ATGGTGGGTTGGGCTCTTGGGTCCCAGTAGTTTTAGGTCTTTCAGAGCACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR CCA 90 bp | TGTAAGTACACTGAAGCTGTCTTCAGACACTCCAGAAGAGGGCGCCAGATCTCGAGCAGTACAGGATGCTaGTGTCGAACAGCATCATTC | + |
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Preference number: 4 (lower is better) Translates to: CKYTEAVFRHSRRGRQISSSTGC*CRTASF Trigger: GAATGATGCTGTTCGACACCAGCATCCTGTACTGCT...CGAGATCTGGCGCCCTCTTCTGGAGTGTCTGAAGACAGCTTCAGTGTACTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| 3UTR CAA 72 bp | GGGGTTAGGGTAAGGCTGGAAATGGAACTTGGGAACTaGCACATTTTAGGAAGTGGTCCACTCCTGAGATAC | + |
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Preference number: 4 (lower is better) Translates to: GVRVRLEMELGN*HILGSGPLLRY Trigger: GTATCTCAGGAGTGGACCACTTCCTAAAATGTGCAAGTTCCCAAGTTCCATTTCCAGCCTTACCCTAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR TCA 90 bp | CCTGACTCCACCACCTTCTCTCCAACCACACACTTGTGCATTAAAGGAGACAGATCTGTTGAACCTCTGTaGTTCTCCCCACTACAATGT | + |
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Preference number: 4 (lower is better) Translates to: PDSTTFSPTTHLCIKGDRSVEPL*FSPLQC Trigger: ACATTGTAGTGGGGAGAATCACAGAGGTTCAACAGA...TCTGTCTCCTTTAATGCACAAGTGTGTGGTTGGAGAGAAGGTGGTGGAGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR TCA 90 bp | ACAGAGCGGAAGTGGAAAGAGACCATTCTCGATGGCACTGCCATGTCTTTGTCTTTGGGTAGATCCAGATaGAACCGTTGTTACCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: TERKWKETILDGTAMSLSLGRSR*NRCYPE Trigger: TTCTGGGTAACAACGGTTTCATCTGGATCTACCCAA...AGACAAAGACATGGCAGTGCCATCGAGAATGGTCTCTTTCCACTTCCGCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR GCA 90 bp | AGTCATAAATTCTCCAAGTTATTCCAAGGTAAGTCAGCATCAGGCCGGGACACTTTCAGGCTCCTCGTGTaGAGAGAAACAGCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: SHKFSKLFQGKSASGRDTFRLLV*RETAPS Trigger: GGATGGAGCTGTTTCTCTGCACACGAGGAGCCTGAA...AGTGTCCCGGCCTGATGCTGACTTACCTTGGAATAACTTGGAGAATTTATGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR CCA 90 bp | GGAAATGGAACTTGGGAACTTGCACATTTTAGGAAGTGGTCCACTCCTGAGATATGGTCCAAAAGCCTCTaGCGTGTTTCCAGCATGATC | + |
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Preference number: 4 (lower is better) Translates to: GNGTWELAHFRKWSTPEIWSKSL*RVSSMI Trigger: GATCATGCTGGAAACACGCCAGAGGCTTTTGGACCA...TATCTCAGGAGTGGACCACTTCCTAAAATGTGCAAGTTCCCAAGTTCCATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR TCA 90 bp | CTGACTCCACCACCTTCTCTCCAACCACACACTTGTGCATTAAAGGAGACAGAGTGGTTTTCAAGGCTTTaGCACAGATCAGTTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTPPPSLQPHTCALKETEWFSRL*HRSVCS Trigger: TGAACAAACTGATCTGTGTCAAAGCCTTGAAAACCA...CTCTGTCTCCTTTAATGCACAAGTGTGTGGTTGGAGAGAAGGTGGTGGAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS CCA 90 bp | AGGCTCCTCGTGTGCAGAGAAACAGCTCCATCCGAGAACACAGCCTaGACCTCCGCACTGATGAGGTCGCCTTCCTGCAAGAAGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: RLLVCRETAPSENTA*TSALMRSPSCKKPL Trigger: GAGAGGCTTCTTGCAGGAAGGCGACCTCATCAGTGCGGAGGTCCAGGCTGTGTTCTCGGATGGAGCTGTTTCTCTGCACACGAGGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS-3UTR CAA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCCCTTCTTCCACCTCTTCTGTaGAACCTCTGTGATTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RKSSRVLLPTEPSHQPSLLPPLL*NLCDSP Trigger: GGGAGAATCACAGAGGTTCAACAGAAGAGGTGGAAG...AAGGGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS TCA 90 bp | AGCCTCTCATGGCCAGCTCATCCTCCGCAGACCTTCTCCTCTCTGTaGTTCTCCCCACTACAATGTCTCCGACCTCTCCATTGTATCTGG | + |
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Preference number: 5 (lower is better) Translates to: SLSWPAHPPQTFSSL*FSPLQCLRPLHCIW Trigger: CCAGATACAATGGAGAGGTCGGAGACATTGTAGTGGGGAGAATCACAGAGAGGAGAAGGTCTGCGGAGGATGAGCTGGCCATGAGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137156.2 |
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| CDS-3UTR CAA 90 bp | TCCTCGTGTGCAGAGAAACAGCTCCATCCGAGAACACAGCCTGGACCTCCGCCTTTGACACAGATCAGTTaGTTCACTCTCTCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: SSCAEKQLHPRTQPGPPPLTQIS*FTLSTE Trigger: CTCTGTGGAGAGAGTGAACAAACTGATCTGTGTCAA...AGGCGGAGGTCCAGGCTGTGTTCTCGGATGGAGCTGTTTCTCTGCACACGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125883.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTGCAGCCCCACTGCAGGTGAGGAATGTGTTTGTCAGATGCTCCTTGGGGATCCAGATGAAACCGTaGTTACCCAGAATCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: GSAAPLQVRNVFVRCSLGIQMKP*LPRITE Trigger: CTCAGTGATTCTGGGTAACAACGGTTTCATCTGGAT...CCCCAAGGAGCATCTGACAAACACATTCCTCACCTGCAGTGGGGCTGCAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS TCA 90 bp | CCCCAGCATCCTCATCCTTGTGCTCAGGTGTTGGGTAGATCCAGATaGAACCGTTGTTACCCAGAATCACTGAGGCACCACATGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: PQHPHPCAQVLGRSR*NRCYPESLRHHMAS Trigger: ACTTGCCATGTGGTGCCTCAGTGATTCTGGGTAACAACGGTTTCATCTGGATCTACCCAACACCTGAGCACAAGGATGAGGATGCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS-3UTR CAA 90 bp | AAGGCTGGAAATGGAACTTGGGAACTTGCACATTTTAGGAAGTGGTCCACTCCTGAGTCCAGCCTGGAATaGGTCTCTACCTTCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: KAGNGTWELAHFRKWSTPESSLE*VSTFHL Trigger: GAGGTGGAAGGTAGAGACCAATTCCAGGCTGGACTC...AGGAGTGGACCACTTCCTAAAATGTGCAAGTTCCCAAGTTCCATTTCCAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS TCA 90 bp | CTACAATGTCTCCGACCTCTCCATTGTATCTGGTTTTCAAGGCTTTaGCACAGATCAGTTTGTTCACTCTCTCCACAGAGCCGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: LQCLRPLHCIWFSRL*HRSVCSLSPQSRPQ Trigger: CTGTGGCCGGCTCTGTGGAGAGAGTGAACAAACTGATCTGTGTCAAAGCCTTGAAAACCAGATACAATGGAGAGGTCGGAGACATTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS-3UTR CAA 90 bp | CTGACTCCACCACCTTCTCTCCAACCACACACTTGTGCATTAAAGGAGACAGAGTTGACACAGATCAGTTaGTTCACTCTCTCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: LTPPPSLQPHTCALKETELTQIS*FTLSTE Trigger: CTCTGTGGAGAGAGTGAACAAACTGATCTGTGTCAA...CTCTGTCTCCTTTAATGCACAAGTGTGTGGTTGGAGAGAAGGTGGTGGAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS-3UTR CAA 90 bp | AAGGCTGGAAATGGAACTTGGGAACTTGCACATTTTAGGAAGTGGTCCACTCCTTCTCCGACCTCTCCATaGTATCTGGTTTTCAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: KAGNGTWELAHFRKWSTPSPTSP*YLVFKA Trigger: AGCCTTGAAAACCAGATACAATGGAGAGGTCGGAGA...AGGAGTGGACCACTTCCTAAAATGTGCAAGTTCCCAAGTTCCATTTCCAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS TCA 90 bp | AGGTGTTGGGTAGATCCAGATGAAACCGTTGTTACCCAGAATCACTaGGGCACCACATGGCAAGTCATGGAAATGAGTCTTCTGTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: RCWVDPDETVVTQNH*GTTWQVMEMSLLSF Trigger: AAAAGACAGAAGACTCATTTCCATGACTTGCCATGTGGTGCCTCAGTGATTCTGGGTAACAACGGTTTCATCTGGATCTACCCAACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS TCA 72 bp | TGTTCACTCTCTCCACAGAGCCGGCCACAGACGCAATaGGCTTCTCTTCCCCCATGTATGTCCCATGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CSLSPQSRPQTQ*ASLPPCMSHGP Trigger: GGGGCCATGGGACATACATGGGGGAAGAGAAGCTCATTGCGTCTGTGGCCGGCTCTGTGGAGAGAGTGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038474.14 ENSMUST00000125883.8 ENSMUST00000137156.2 |
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| CDS CCA 72 bp | GATGCGCAAGGGAGGCCTCATAGCAGTACAGGATGCTaGTGTCGAACAGCATCATTCTCTGAGTTACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DAQGRPHSSTGC*CRTASFSELPA Trigger: TGCTGGTAACTCAGAGAATGATGCTGTTCGACACCAGCATCCTGTACTGCTATGAGGCCTCCCTTGCGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS TCA 72 bp | CCTCATCCTTGTGCTCAGGTGTTGGGTAGATCCAGATaGAACCGTTGTTACCCAGAATCACTGAGGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: PHPCAQVLGRSR*NRCYPESLRHH Trigger: GTGGTGCCTCAGTGATTCTGGGTAACAACGGTTTCATCTGGATCTACCCAACACCTGAGCACAAGGATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS GCA 72 bp | TCTGATGCGCAAGGGAGGCCTCATAGCAGTACAGGATaGTGGTGTCGAACAGCATCATTCTCTGAGTTACCA | + |
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Preference number: 6 (lower is better) Translates to: SDAQGRPHSSTG*WCRTASFSELP Trigger: TGGTAACTCAGAGAATGATGCTGTTCGACACCAGCATCCTGTACTGCTATGAGGCCTCCCTTGCGCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS CCA 72 bp | GAAGCCCCCAGCATCCTCATCCTTGTGCTCAGGTGTTaGGTAGATCCAGATGAAACCGTTGTTACCCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: EAPSILILVLRC*VDPDETVVTQN Trigger: ATTCTGGGTAACAACGGTTTCATCTGGATCTACCCAACACCTGAGCACAAGGATGAGGATGCTGGGGGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS TCA 72 bp | CCTCCTGGTCCAAAAGCCTCTGGCGTGTTTCCAGCATaGTCTCCTCCATTACTTCCGGTTTTAAGATATCCT | + |
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Preference number: 6 (lower is better) Translates to: PPGPKASGVFPA*SPPLLPVLRYP Trigger: AGGATATCTTAAAACCGGAAGTAATGGAGGAGATCATGCTGGAAACACGCCAGAGGCTTTTGGACCAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038474.14 |
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| CDS CAA 90 bp | ACTACAATGTCTCCGACCTCTCCATTGTATCTGGTTTTCAAGGCTTaGACACAGATCAGTTTGTTCACTCTCTCCACAGAGCCGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: TTMSPTSPLYLVFKA*TQISLFTLSTEPAT Trigger: TGTGGCCGGCTCTGTGGAGAGAGTGAACAAACTGATCTGTGTCAAAGCCTTGAAAACCAGATACAATGGAGAGGTCGGAGACATTGTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS TCA 72 bp | CTCCGACCTCTCCATTGTATCTGGTTTTCAAGGCTTTaGCACAGATCAGTTTGTTCACTCTCTCCACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LRPLHCIWFSRL*HRSVCSLSPQS Trigger: GCTCTGTGGAGAGAGTGAACAAACTGATCTGTGTCAAAGCCTTGAAAACCAGATACAATGGAGAGGTCGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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| CDS TCA 72 bp | GTAGATCCAGATGAAACCGTTGTTACCCAGAATCACTaGGGCACCACATGGCAAGTCATGGAAATGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VDPDETVVTQNH*GTTWQVMEMSL Trigger: AAGACTCATTTCCATGACTTGCCATGTGGTGCCTCAGTGATTCTGGGTAACAACGGTTTCATCTGGATCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038474.14 ENSMUST00000137156.2 |
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