Pregenerated sensors for EXOG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042787Ensembl transcript IDs: ENSMUST00000035094.14, ENSMUST00000164213.5, ENSMUST00000214140.2, ENSMUST00000214462.2
Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGCCAGCAGAGGAGAGCACGGCAACAGGAGGAGGAGCTCGGCTaGATAAACACATGGTGGGAACCTGGGGCACAGGCAGGAGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: PGQQRRARQQEEELG*INTWWEPGAQAGGA Trigger: GGCTCCTCCTGCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGTTGCCGTGCTCTCCTCTGCTGGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR TCA 90 bp | AGTCTGGAGGTCAGCACAGACAGCAGCTGCTCTTTCCCCAGGCAATaGGCTGGTTCGGACCTTGGGCCCAGGCTATACCTACCTGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLEVSTDSSCSFPRQ*AGSDLGPRLYLPVV Trigger: CACCACAGGTAGGTATAGCCTGGGCCCAAGGTCCGAACCAGCTCATTGCCTGGGGAAAGAGCAGCTGCTGTCTGTGCTGACCTCCAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR GCA 90 bp | CTCTCCCAAGAACTGCAGGGCTTTCACAGGTGCACAGGCTGTGGGTaGAGTTGGCAGGGCACATCCTACCCCTCACAAGCCGTTAACAGG | + |
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Preference number: 1 (lower is better) Translates to: LSQELQGFHRCTGCG*SWQGTSYPSQAVNR Trigger: CCTGTTAACGGCTTGTGAGGGGTAGGATGTGCCCTGCCAACTGCACCCACAGCCTGTGCACCTGTGAAAGCCCTGCAGTTCTTGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR CCA 90 bp | AGACAGCAGCTGCTCTTTCCCCAGGCAATGAGCTGGTTCGGACCTTaGGCCCAGGCTATACCTACCTGTGGTGTGCTGGTCCAGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: RQQLLFPQAMSWFGP*AQAIPTCGVLVQQT Trigger: TGTCTGCTGGACCAGCACACCACAGGTAGGTATAGCCTGGGCCCAAGGTCCGAACCAGCTCATTGCCTGGGGAAAGAGCAGCTGCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR TCA 90 bp | GTGACATGGAGGCACACAGGATCATGCCAGTGTCAGGCTGCAAACTaGGCACAGCTCTGCAGGAAGCCATTCCCTCAAGAGCAGACTGCC | + |
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Preference number: 1 (lower is better) Translates to: VTWRHTGSCQCQAAN*AQLCRKPFPQEQTA Trigger: GGCAGTCTGCTCTTGAGGGAATGGCTTCCTGCAGAGCTGTGCTCAGTTTGCAGCCTGACACTGGCATGATCCTGTGTGCCTCCATGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR CCA 90 bp | CAAGAACTGCAGGGCTTTCACAGGTGCACAGGCTGTGGGTGCAGTTaGCAGGGCACATCCTACCCCTCACAAGCCGTTAACAGGAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: QELQGFHRCTGCGCS*QGTSYPSQAVNRKS Trigger: AGACTTCCTGTTAACGGCTTGTGAGGGGTAGGATGTGCCCTGCCAACTGCACCCACAGCCTGTGCACCTGTGAAAGCCCTGCAGTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR GCA 90 bp | GGGCTCAAGAGCACTGGCTGCTCTTGCAGAGAACCCCGATTCAACTaGAGAGAATCCAGCATTCACACGGTGGCTCAGAACCATCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GLKSTGCSCREPRFN*RESSIHTVAQNHLG Trigger: TCCCAGATGGTTCTGAGCCACCGTGTGAATGCTGGATTCTCTGCAGTTGAATCGGGGTTCTCTGCAAGAGCAGCCAGTGCTCTTGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR CCA 90 bp | GCTGGGCACTCGTCAAAGGCCGAAGAGAAGGGTAGAGGTCTCTGCTaGTTAAGATGTAAGAGCAGAAATGGCAGCGCAGTTCAGGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: AGHSSKAEEKGRGLC*LRCKSRNGSAVQGL Trigger: GAGCCCCTGAACTGCGCTGCCATTTCTGCTCTTACATCTTAACCAGCAGAGACCTCTACCCTTCTCTTCGGCCTTTGACGAGTGCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR CCA 90 bp | TCCAGACGGGGGAAAAACACCAGACCTGACATCTTCTCCAGGTCATaGAGGCTCACCTGGAACTCGGATAACTGGGACTGGAACCCAATG | + |
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Preference number: 1 (lower is better) Translates to: SRRGKNTRPDIFSRS*RLTWNSDNWDWNPM Trigger: CATTGGGTTCCAGTCCCAGTTATCCGAGTTCCAGGTGAGCCTCCATGACCTGGAGAAGATGTCAGGTCTGGTGTTTTTCCCCCGTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR TCA 90 bp | CACAGACAGATGGGAGGACTTCAGGGTCATGAGGGAAGGAGCACGTaGGAGCAGAGTTTTAAAACCATCTCAGCCACCTCGGATCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: HRQMGGLQGHEGRST*EQSFKTISATSDPR Trigger: TCTGGGATCCGAGGTGGCTGAGATGGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTCCCATCTGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR TCA 90 bp | ACGGTGGCTCAGAACCATCTGGGATTCCATTTCCAGGGTATCCAATaGGCTCTTCTAACCTCTGTGGGCAACAGGCACTCGTGTGGTATG | + |
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Preference number: 1 (lower is better) Translates to: TVAQNHLGFHFQGIQ*ALLTSVGNRHSCGM Trigger: CATACCACACGAGTGCCTGTTGCCCACAGAGGTTAGAAGAGCTCATTGGATACCCTGGAAATGGAATCCCAGATGGTTCTGAGCCACCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR GCA 90 bp | CTTGTCCTTGGATATATGCTCAAGAACCCATCTGGGCACCCGTTTTaGCTGATCGTAAGACAGGGCGTGGTTAGTGTAACGCCTCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: LVLGYMLKNPSGHPF*LIVRQGVVSVTPRL Trigger: GAGACGAGGCGTTACACTAACCACGCCCTGTCTTACGATCAGGCAAAACGGGTGCCCAGATGGGTTCTTGAGCATATATCCAAGGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR CCA 90 bp | TGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTaGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAAC | + |
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Preference number: 1 (lower is better) Translates to: WQSGRFRRVLLPRSF*AVRMDSGQLKICIN Trigger: GTTTATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR CCA 90 bp | TGCCACAAAGATCACTCTCGTATTGCTTGGAGGACAGTGGCAGAGTaGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: CHKDHSRIAWRTVAE*QIQTSPFAQKLLGC Trigger: ACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGATCTTTGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR CCA 90 bp | GGAAGGATTTATTTGATCCGACAGCGCTGGGATTCCAGTCCACTATaGTATGGGAGGCAGGGCAACAGGAACAGCAGTCTCCAGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: GRIYLIRQRWDSSPL*YGRQGNRNSSLQRF Trigger: AAACCTCTGGAGACTGCTGTTCCTGTTGCCCTGCCTCCCATACCATAGTGGACTGGAATCCCAGCGCTGTCGGATCAAATAAATCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR TCA 90 bp | CTTTTTCTCATAGCGACTCAGGAAGTAATCGTCAGGTTCCACCCCTaGGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCTGGCCACAGA | + |
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Preference number: 1 (lower is better) Translates to: LFLIATQEVIVRFHP*ALQSFQNLLQSGHR Trigger: TCTGTGGCCAGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAGGGGTGGAACCTGACGATTACTTCCTGAGTCGCTATGAGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR CCA 90 bp | TATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTGCTTaGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: YRRQTQCHKDHSRIA*RTVAEWQIQTSPFA Trigger: GGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR CCA 90 bp | AAAAACACCAGACCTGACATCTTCTCCAGGTCATGGAGGCTCACCTaGAACTCGGATAACTGGGACTGGAACCCAATGGCTTTATTTGGC | + |
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Preference number: 1 (lower is better) Translates to: KNTRPDIFSRSWRLT*NSDNWDWNPMALFG Trigger: GCCAAATAAAGCCATTGGGTTCCAGTCCCAGTTATCCGAGTTCCAGGTGAGCCTCCATGACCTGGAGAAGATGTCAGGTCTGGTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR TCA 90 bp | ACTCTTGGCAAACACCTTTCTTGGGCTCCTTTAGAAAGGCCCCAATaGGGCAAGAAACATACTTATCTGGCACCATGTGATCCCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TLGKHLSWAPLERPQ*GKKHTYLAPCDPWR Trigger: CCTCCAGGGATCACATGGTGCCAGATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAAGAAAGGTGTTTGCCAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR GCA 90 bp | TTCCATCATTTCTTGAAAATAAACCTGTTGGTCACAGGTGCTCAGTaGACACCGAGACAGACACTAGGACTGCTTTTCCAGCTGGGCGTC | + |
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Preference number: 1 (lower is better) Translates to: FHHFLKINLLVTGAQ*TPRQTLGLLFQLGV Trigger: GACGCCCAGCTGGAAAAGCAGTCCTAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGACCAACAGGTTTATTTTCAAGAAATGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR GCA 90 bp | TTTCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTaGTTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: FLSEANTMPQRSLSY*LEDSGRVADSDESF Trigger: AAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR GCA 90 bp | GTCAGAATTCCATCATTTCTTGAAAATAAACCTGTTGGTCACAGGTaGTCAGTGCACACCGAGACAGACACTAGGACTGCTTTTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: VRIPSFLENKPVGHR*SVHTETDTRTAFPA Trigger: AGCTGGAAAAGCAGTCCTAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGACCAACAGGTTTATTTTCAAGAAATGATGGAATTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR GCA 90 bp | CAGAAGAGGGTCAGCCAGAGCCTTCTTGTCTTTATTGTAAAGTCATaGATTTCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTC | + |
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Preference number: 1 (lower is better) Translates to: QKRVSQSLLVFIVKS*ISIGGKHNATKITL Trigger: GAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGAAATGCATGACTTTACAATAAAGACAAGAAGGCTCTGGCTGACCCTCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAGAAGCTTCTGGGCTGTaGGCATGGACTCAGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: WCAGPADSRTRGTRRLLAEASGL*AWTQDS Trigger: GCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTC...TGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCAGGAGGCTACCTGTGGTGTGCTaGTCCAGCAGACAGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GGARLHKHMVGTWGTGRRLPVVC*SSRQQD Trigger: GTCCTGCTGTCTGCTGGACCAGCACACCACAGGTAG...CCTCCTGCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGACAGATGGGAGGACTTCAGGGTCATGAGGGAAGGAGCACGTGAGAGCCCTGCCGGGGCCATGTaGCCTCGTGACCAGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: NTDRWEDFRVMREGARESPAGAM*PRDQPL Trigger: GAGTGGCTGGTCACGAGGCCACATGGCCCCGGCAGG...GCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTCCCATCTGTCTGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR CAA 90 bp | CAGACAGCAGCTGCTCTTTCCCCAGGCAATGAGCTGGTTCGGACCTaGGGCCCAGGCTATACCTACCTGTGGTGTGCTGGTCCAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: QTAAALSPGNELVRT*GPGYTYLWCAGPAD Trigger: GTCTGCTGGACCAGCACACCACAGGTAGGTATAGCCTGGGCCCAAGGTCCGAACCAGCTCATTGCCTGGGGAAAGAGCAGCTGCTGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCAGGAGGGGCTGCATAAACACATaGTGGGAACCTGGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: GGARLHKHMVGTWGTGRRGCINT*WEPGAQ Trigger: CTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCC...CCTCCTGCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGGTGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTTTATCTGGCACCATGTaGTCCCTGGAGGGAACCACA | + |
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Preference number: 2 (lower is better) Translates to: PVVCWSSRQQDQRYPATLLSGTM*SLEGTT Trigger: TGTGGTTCCCTCCAGGGATCACATGGTGCCAGATAA...AAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGAGGGCGCTGAAGGCTaGAGGGACAGAAGGATCCGG | + |
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Preference number: 2 (lower is better) Translates to: VAEWQIQTSPFAQKLLGCEGAEG*RDRRIR Trigger: CCGGATCCTTCTGTCCCTTCAGCCTTCAGCGCCCTC...ACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTGGTGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTATTCCGGATGTCCCTaGTTCTATCCAGACGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: TCGVLVQQTAGPEVPGDSYSGCP*FYPDGG Trigger: TCCCCCGTCTGGATAGAAGCAGGGACATCCGGAATA...AGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCACAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGCCTTCCCAGGGCTGCTaGAGAAACACTCAGGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: SGRVADSDESFCPEASGLPSQGC*RNTQAP Trigger: CGGGGCCTGAGTGTTTCTCCAGCAGCCCTGGGAAGG...CAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCAGAGTTTTAAAACCATCTCAGCCACCTCGGATCCCAGAGAAGGACGACCCTGCCGGGGCCATGTaGCCTCGTGACCAGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: ESRVLKPSQPPRIPEKDDPAGAM*PRDQPL Trigger: GAGTGGCTGGTCACGAGGCCACATGGCCCCGGCAGG...GTCGTCCTTCTCTGGGATCCGAGGTGGCTGAGATGGTTTTAAAACTCTGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCACCCAATGGCTTTATTTaGCACCACAAAGGCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: WCAGPADSRTRGTRRLLAPNGFI*HHKGPQ Trigger: CTGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGG...TGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTTCCCAGGGCTGCTGGAGAAACACTCAGGCCCCGCCATCACCTCTTTTTTATCTGGCACCATGTaGTCCCTGGAGGGAACCACA | + |
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Preference number: 2 (lower is better) Translates to: ASFPGLLEKHSGPAITSFLSGTM*SLEGTT Trigger: TGTGGTTCCCTCCAGGGATCACATGGTGCCAGATAA...AAAAGAGGTGATGGCGGGGCCTGAGTGTTTCTCCAGCAGCCCTGGGAAGGAGGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCTTCCCAGGGCTGCTGGAGAAACACTCAGGCCCCGCCATCACCTCTTTTGCTCAAGAACCCATCTaGGCACCCGTTTTGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: ASFPGLLEKHSGPAITSFAQEPI*APVLPD Trigger: ATCAGGCAAAACGGGTGCCCAGATGGGTTCTTGAGC...AAAAGAGGTGATGGCGGGGCCTGAGTGTTTCTCCAGCAGCCCTGGGAAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAAACTTGCTTGGAGGACAGTaGCAGAGTGGCAGATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: CAGPADSRTRGTRRLLANLLGGQ*QSGRFR Trigger: TCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAA...GTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | TCAACAATACCCTCTCAGATGAGGCAGGGCGCACAGGTGACATGGAGGCACACAGGGGCTCAAGAGCACTaGCTGCTCTTGCAGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: STIPSQMRQGAQVTWRHTGAQEH*LLLQRT Trigger: GGTTCTCTGCAAGAGCAGCCAGTGCTCTTGAGCCCC...TGTGTGCCTCCATGTCACCTGTGCGCCCTGCCTCATCTGAGAGGGTATTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR-3UTR GCA 90 bp | ACACACCCTTCTCACCAGGAGGGCTGTAGTGCCAGAAACAGCCGTGGATGCAGGTGGGACAGCAGGGTTTaGACAGAGGAAGAACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: THPSHQEGCSARNSRGCRWDSRV*TEEEQS Trigger: TGACTGTTCTTCCTCTGTGCAAACCCTGCTGTCCCA...CCTGCATCCACGGCTGTTTCTGGCACTACAGCCCTCCTGGTGAGAAGGGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAAACCGGAGGCAAACACAATaGCACAAAGATCACTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: CAGPADSRTRGTRRLLANRRQTQ*HKDHSR Trigger: ACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCG...GTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAACCAGTCTGGCTACCTGTGGTGTGCTaGTCCAGCAGACAGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LGCAHGLRTAQDLYKPVWLPVVC*SSRQQD Trigger: GTCCTGCTGTCTGCTGGACCAGCACACCACAGGTAG...CCAGACTGGTTTATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTTTGCCCAGAAGCTTCTaGGCTGTGCGCATGGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: VAEWQIQTSPFAQKLLGCLPRSF*AVRMDS Trigger: TGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCAA...ACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGACTTCAGGGTCATGAGGGAAGGAGCACGTGAGAGCAGAGTTTTAAAACCACCTTCCCAGGGCTGCTaGAGAAACACTCAGGCCCCG | + |
|
Preference number: 2 (lower is better) Translates to: EDFRVMREGARESRVLKPPSQGC*RNTQAP Trigger: CGGGGCCTGAGTGTTTCTCCAGCAGCCCTGGGAAGG...TGGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCACAGGTGCTCAGTGCACACCGAGACAGACACTAGGACTGCTTTTCCAGCTGTTATCTGGCACCATGTaGTCCCTGGAGGGAACCACA | + |
|
Preference number: 2 (lower is better) Translates to: VTGAQCTPRQTLGLLFQLLSGTM*SLEGTT Trigger: TGTGGTTCCCTCCAGGGATCACATGGTGCCAGATAA...CAGCTGGAAAAGCAGTCCTAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGCGCATGGACTGGGACAGCAGGGTTTaGACAGAGGAAGAACAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GRFRRVLLPRSFWAVRMDWDSRV*TEEEQS Trigger: TGACTGTTCTTCCTCTGTGCAAACCCTGCTGTCCCA...GTCCATGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGCAACAGGAACAGCAGTCTCCAGAGGTTTATATGTTTCTATGGCGGCAGGAAGCTTCTGGGCTGTaGGCATGGACTCAGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: AGQQEQQSPEVYMFLWRQEASGL*AWTQDS Trigger: GCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTC...CTGCCGCCATAGAAACATATAAACCTCTGGAGACTGCTGTTCCTGTTGCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGCGCATATTCCGGATGTCCCTaGTTCTATCCAGACGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RVADSDESFCPEASGLCAYSGCP*FYPDGG Trigger: TCCCCCGTCTGGATAGAAGCAGGGACATCCGGAATA...TGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCTTCCCAGGGCTGCTGGAGAAACACTCAGGCCCCGCCATCACCTCTTTTAGGAAGAACAGTCACTaGATTCTCCAACACAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: ASFPGLLEKHSGPAITSFRKNSH*ILQHRQ Trigger: CTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCT...AAAAGAGGTGATGGCGGGGCCTGAGTGTTTCTCCAGCAGCCCTGGGAAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTGTACCCGGCGACTCTTaGCAAACACCTTTCTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LEDSGRVADSDESFCPEAVPGDS*QTPFLG Trigger: GCCCAAGAAAGGTGTTTGCCAAGAGTCGCCGGGTAC...AGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCAATCTTCCTCGTGCTCAGGTACAGAGTGAATTCCTGGAAACCCAGGAGCCTACCTGTGGTGTGCTaGTCCAGCAGACAGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PSIFLVLRYRVNSWKPRSLPVVC*SSRQQD Trigger: GTCCTGCTGTCTGCTGGACCAGCACACCACAGGTAG...GCTCCTGGGTTTCCAGGAATTCACTCTGTACCTGAGCACGAGGAAGATTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAACCAGTCTGGGGCTGCATAAACACATaGTGGGAACCTGGGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: LGCAHGLRTAQDLYKPVWGCINT*WEPGAQ Trigger: CTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCC...CCAGACTGGTTTATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCCTTCTCACCAGGAGGGCTGTAGTGCCAGAAACAGCCGTGGATGCAGGGGGACTGGAACCCAATaGCTTTATTTGGCACCACAA | + |
|
Preference number: 2 (lower is better) Translates to: THPSHQEGCSARNSRGCRGTGTQ*LYLAPQ Trigger: TTGTGGTGCCAAATAAAGCCATTGGGTTCCAGTCCC...CCTGCATCCACGGCTGTTTCTGGCACTACAGCCCTCCTGGTGAGAAGGGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGGCTGCAAACTGAGCACAGCTCTGCAGGAAGCCATTCCCTCAAGAGCAGAGGGAAGGAGCACGTaGGAGCAGAGTTTTAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: VSGCKLSTALQEAIPSRAEGRST*EQSFKT Trigger: GGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTC...TGCTCTTGAGGGAATGGCTTCCTGCAGAGCTGTGCTCAGTTTGCAGCCTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR TCA 90 bp | AACACAGACAGATGGGAGGACTTCAGGGTCATGAGGGAAGGAGCACGTGAGAGCAGATACAGAGTTCTCTaGGCCTCATCTTGCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: NTDRWEDFRVMREGARESRYRVL*ASSCPQ Trigger: CTGTGGGCAAGATGAGGCTCAGAGAACTCTGTATCT...GCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTCCCATCTGTCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACACCCTTCTCACCAGGAGGGCTGTAGTGCCAGAAACAGCCGTGGATGCAGGTGTCAGCGTCACCGATaGTCTTGTCCTTGGATATAT | + |
|
Preference number: 2 (lower is better) Translates to: THPSHQEGCSARNSRGCRCQRHR*SCPWIY Trigger: ATATATCCAAGGACAAGATCATCGGTGACGCTGACA...CCTGCATCCACGGCTGTTTCTGGCACTACAGCCCTCCTGGTGAGAAGGGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAAGCTTCTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAAACTTGTTATTTCCTaGCGGGGCCATGTGGCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: PRSFWAVRMDSGQLKICIKLVIS*RGHVAS Trigger: CGAGGCCACATGGCCCCGGCAGGAAATAACAAGTTT...TATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAACCAGTCTGGGTCACAGGTGCTCAGTaGACACCGAGACAGACACTA | + |
|
Preference number: 2 (lower is better) Translates to: LGCAHGLRTAQDLYKPVWVTGAQ*TPRQTL Trigger: TAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGAC...CCAGACTGGTTTATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCAGGCTGCAAACTGAGCACAGCTCTGCAGGAAGCCATTCCCTCAAGAGCATCCAACACAGACAGATaGGAGGACTTCAGGGTCATG | + |
|
Preference number: 2 (lower is better) Translates to: VSGCKLSTALQEAIPSRASNTDR*EDFRVM Trigger: CATGACCCTGAAGTCCTCCCATCTGTCTGTGTTGGA...TGCTCTTGAGGGAATGGCTTCCTGCAGAGCTGTGCTCAGTTTGCAGCCTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGCGCCTGTATAAACCAGTCTaGAGGTCAGCACAGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QSGRFRRVLLPRSFWAVRLYKPV*RSAQTA Trigger: TGCTGTCTGTGCTGACCTCCAGACTGGTTTATACAG...GCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGGTGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTAAAAGGTTTCTGCCATaGCTTCACTGGAAAACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PVVCWSSRQQDQRYPATLKRFLP*LHWKTC Trigger: ACAAGTTTTCCAGTGAAGCCATGGCAGAAACCTTTT...AAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCTCGGATAACTGGGACTaGAACCCAATGGCTTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: TGGGARLHKHMVGTWGTGSDNWD*NPMALF Trigger: AAATAAAGCCATTGGGTTCCAGTCCCAGTTATCCGA...GCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTATCCTCAGAAGGACTGGCACAAGTTAATGGGGAAGAGGAAGGTACCGCAGAGGACTTCAGGGTCATaGGGGAAGGAGCACGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FYPQKDWHKLMGKRKVPQRTSGS*GKEHVR Trigger: TCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCT...CTGCGGTACCTTCCTCTTCCCCATTAACTTGTGCCAGTCCTTCTGAGGATAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGGCTGCAAACTGAGCACAGCTCTGCAGGAAGCCATTCCCTCAAGAGCACTGAGGCACCCTGGATaGCTTCTGTTGAATACCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VSGCKLSTALQEAIPSRALRHPG*LLLNTN Trigger: ATTGGTATTCAACAGAAGTCATCCAGGGTGCCTCAG...TGCTCTTGAGGGAATGGCTTCCTGCAGAGCTGTGCTCAGTTTGCAGCCTGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTCTGAGGCACCCTGGATaGCTTCTGTTGAATACCAAT | + |
|
Preference number: 2 (lower is better) Translates to: QWQSGRFRRVLLPRSFWALRHPG*LLLNTN Trigger: ATTGGTATTCAACAGAAGTCATCCAGGGTGCCTCAG...AGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCACCCCTGAGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCTGGCCACACTGAGGCACCCTGGATaGCTTCTGTTGAATACCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GSTPELFKASRTFSSLATLRHPG*LLLNTN Trigger: ATTGGTATTCAACAGAAGTCATCCAGGGTGCCTCAG...TGTGGCCAGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAGGGGTGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGAAGCGAGGGCGCTGAAGGCTaGAGGGACAGAAGGATCCGG | + |
|
Preference number: 2 (lower is better) Translates to: RNFLIQTRFFLSRESVGSEGAEG*RDRRIR Trigger: CCGGATCCTTCTGTCCCTTCAGCCTTCAGCGCCCTC...GCTTCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCAGGAGGGTCTTTGGAGGATTTTaGTCAGAATTCCATCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: GGARLHKHMVGTWGTGRRVFGGF*SEFHHF Trigger: GAAATGATGGAATTCTGACCAAAATCCTCCAAAGAC...CCTCCTGCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTGCTTTTCCAGCTGGGCGTCCTTTTGCTCCTTAGCCTTCAGTTCCTCCAGGACTCTGAGGCACCCTaGATGACTTCTGTTGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: GLLFQLGVLLLLSLQFLQDSEAP*MTSVEY Trigger: GTATTCAACAGAAGTCATCCAGGGTGCCTCAGAGTC...CTGGAGGAACTGAAGGCTAAGGAGCAAAAGGACGCCCAGCTGGAAAAGCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGGTGCTCAGTGCACACCGAGACAGACACTAGGACTGCTTTTCCAGCTGGACTCTGAGGCACCCTaGATGACTTCTGTTGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: VTGAQCTPRQTLGLLFQLDSEAP*MTSVEY Trigger: GTATTCAACAGAAGTCATCCAGGGTGCCTCAGAGTC...CAGCTGGAAAAGCAGTCCTAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTGGATGCAGGTACGGACTGAGTTACATCCATCTAACTCTGTCTTGACTCTGGCACCATGTGATCCCTaGAGGGAACCACAGTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PWMQVRTELHPSNSVLTLAPCDP*REPQSL Trigger: CAGAGACTGTGGTTCCCTCCAGGGATCACATGGTGC...CAGAGTCAAGACAGAGTTAGATGGATGTAACTCAGTCCGTACCTGCATCCACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTCTATCCTCAGAAGGACTGGCACAAGTTAATGGGGAAGAGGAAGGTACCGTACCCGGCGACTCTTaGCAAACACCTTTCTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GFLSSEGLAQVNGEEEGTVPGDS*QTPFLG Trigger: GCCCAAGAAAGGTGTTTGCCAAGAGTCGCCGGGTAC...GGTACCTTCCTCTTCCCCATTAACTTGTGCCAGTCCTTCTGAGGATAGAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAACCAGTCTGGTTGCTTGGAGGACAGTaGCAGAGTGGCAGATTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGCAHGLRTAQDLYKPVWLLGGQ*QSGRFR Trigger: TCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAA...CCAGACTGGTTTATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCGTCACTGTGTCCTACACCTGACAGTTTCTTTTTCTCCAAATGAAGGAGCACCTTCCCAGGGCTGCTaGAGAAACACTCAGGCCCCG | + |
|
Preference number: 2 (lower is better) Translates to: IRHCVLHLTVSFSPNEGAPSQGC*RNTQAP Trigger: CGGGGCCTGAGTGTTTCTCCAGCAGCCCTGGGAAGG...TGCTCCTTCATTTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGTGACGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTTGGCTCAGAACCATCTaGGATTCCATTTCCAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VAEWQIQTSPFAQKLLGCWLRTI*DSISRV Trigger: TACCCTGGAAATGGAATCCCAGATGGTTCTGAGCCA...ACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGAAGCTTCTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATACAGAGTGAATTCCTaGAAACCCAGGAGCTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CPEASGLCAWTQDSSRSVYRVNS*KPRSLQ Trigger: CTGCAAGCTCCTGGGTTTCCAGGAATTCACTCTGTA...TACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR CAA 90 bp | ACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAAACACCTTTCTaGGGCTCCTTTAGAAAGGCCCCAATGAGGCAAGAAACATACTTA | + |
|
Preference number: 2 (lower is better) Translates to: TAGPEVPGDSWQTPF*GSFRKAPMRQETYL Trigger: TAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAAGAAAGGTGTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
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| 3UTR CAA 90 bp | ACCCCACTCAGGTTTGACTGGCTACAACGTCTGCCTCTGACACATTaGATACTCAAGTATGGCCCAGGAATCTGCTGCACTGCAATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TPLRFDWLQRLPLTH*ILKYGPGICCTAIQ Trigger: CTGGATTGCAGTGCAGCAGATTCCTGGGCCATACTTGAGTATCAAATGTGTCAGAGGCAGACGTTGTAGCCAGTCAAACCTGAGTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CAA 90 bp | ACACCGAGACAGACACTAGGACTGCTTTTCCAGCTGGGCGTCCTTTaGCTCCTTAGCCTTCAGTTCCTCCAGCTTTTTCTCATAGCGACT | + |
|
Preference number: 2 (lower is better) Translates to: TPRQTLGLLFQLGVL*LLSLQFLQLFLIAT Trigger: AGTCGCTATGAGAAAAAGCTGGAGGAACTGAAGGCTAAGGAGCAAAAGGACGCCCAGCTGGAAAAGCAGTCCTAGTGTCTGTCTCGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCAGAAGCTTCTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAGACAAGATTCTTCCTaGGTAGGGAGAGTGTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PRSFWAVRMDSGQLKICIRQDSS*VGRVWE Trigger: TTCCCACACTCTCCCTACTCAGGAAGAATCTTGTCT...TATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCAGAAGCTTCTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATGTCAGCGTCACCGATaGTCTTGTCCTTGGATATAT | + |
|
Preference number: 2 (lower is better) Translates to: CPEASGLCAWTQDSSRSVCQRHR*SCPWIY Trigger: ATATATCCAAGGACAAGATCATCGGTGACGCTGACA...TACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCACAGGTGCTCAGTGCACACCGAGACAGACACTAGGACTGCTTTTCCAGCTGTTGTCCTTGGATATATaGTCAAGAACCCATCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VTGAQCTPRQTLGLLFQLLSLDI*SRTHLG Trigger: GCCCAGATGGGTTCTTGAGCATATATCCAAGGACAA...CAGCTGGAAAAGCAGTCCTAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCCACCCCTGAGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCTGGCCACATTGTCCTTGGATATATaGTCAAGAACCCATCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GSTPELFKASRTFSSLATLSLDI*SRTHLG Trigger: GCCCAGATGGGTTCTTGAGCATATATCCAAGGACAA...TGTGGCCAGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAGGGGTGGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTTTGCACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGAAACTTGTTATTTCCTaGCGGGGCCATGTGGCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: RVCTEEEQSLDSPTQTDGKLVIS*RGHVAS Trigger: CGAGGCCACATGGCCCCGGCAGGAAATAACAAGTTT...CCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAGGGTTTGCACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGAGTCACAGGTGCTCAGTaGACACCGAGACAGACACTA | + |
|
Preference number: 2 (lower is better) Translates to: QQGLHRGRTVTGFSNTDRVTGAQ*TPRQTL Trigger: TAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGAC...TCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAACCCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGAGGACTTCATTGCCCAGAAGCTTCTaGGCTGTGCGCATGGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: TEEEQSLDSPTQTDGRTSLPRSF*AVRMDS Trigger: TGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCAA...TGAAGTCCTCCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTGCTTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCATTGCTTGGAGGACAGTaGCAGAGTGGCAGATTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: YCLEDSGRVADSDESFCPLLGGQ*QSGRFR Trigger: TCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAA...TGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGGACTGGAACCCAATGGCTTTATTTGGCACCACAAAGGCCCCCAGCGCCACTGCCATGGCTTCACTaGAAAACTTGTTATTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TGTGTQWLYLAPQRPPAPLPWLH*KTCYFL Trigger: CAGGAAATAACAAGTTTTCCAGTGAAGCCATGGCAG...TGGCGCTGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGGTTCCAGTCCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAACAGCCGTGGATGCAGGTACGGACTGAGTTACATCCATCTAACTCTGTCGAGGGAAGGAGCACGTaGGAGCAGAGTTTTAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: QKQPWMQVRTELHPSNSVEGRST*EQSFKT Trigger: GGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTC...GACAGAGTTAGATGGATGTAACTCAGTCCGTACCTGCATCCACGGCTGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAATTTTTCCCACAGAAATaGTGCGAGAAGAGACACACC | + |
|
Preference number: 2 (lower is better) Translates to: CLEDSGRVADSDESFCPEFFPQK*CEKRHT Trigger: GGTGTGTCTCTTCTCGCATCATTTCTGTGGGAAAAA...TTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTTTTTCCCACAGAAATaGTGCGAGAAGAGACACACC | + |
|
Preference number: 2 (lower is better) Translates to: LEDSGRVADSDESFCPEAFFPQK*CEKRHT Trigger: GGTGTGTCTCTTCTCGCATCATTTCTGTGGGAAAAA...AGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGCTCCTTTAGAAAGGCCCCAATGAGGCAAGAAACATACTTATCTGGCACCTTATCTGGCACCATGTaGTCCCTGGAGGGAACCACA | + |
|
Preference number: 2 (lower is better) Translates to: LGSFRKAPMRQETYLSGTLSGTM*SLEGTT Trigger: TGTGGTTCCCTCCAGGGATCACATGGTGCCAGATAA...GGTGCCAGATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGCGCTTAGAAAGGCCCCAATaGGGCAAGAAACATACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: QSGRFRRVLLPRSFWAVRLERPQ*GKKHTY Trigger: ATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAA...GCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTACTGTGTCCTACACCTaGCAGTTTCTTTTTCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: VAEWQIQTSPFAQKLLGCTVSYT*QFLFLQ Trigger: TTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGT...ACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCACTCTCGTATTGCTTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCAGACAAGATTCTTCCTaGGTAGGGAGAGTGTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ITLVLLGGQWQSGRFRRVRQDSS*VGRVWE Trigger: TTCCCACACTCTCCCTACTCAGGAAGAATCTTGTCT...GACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCCCTGAGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCTGGCCACAGACCAGAAGGATCCGGCTTaGATTTACAATGCTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: STPELFKASRTFSSLATDQKDPA*IYNAFC Trigger: ACAGAAAGCATTGTAAATTCAAGCCGGATCCTTCTG...GTCTGTGGCCAGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAGGGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAACAGCCGTGGATGCAGGTACGGACTGAGTTACATCCATCTAACTCTGTCAGAAACAGCCGTGGATaGAGGTACGGACTGAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: QKQPWMQVRTELHPSNSVRNSRG*RYGLSY Trigger: GTAACTCAGTCCGTACCTGCATCCACGGCTGTTTCT...GACAGAGTTAGATGGATGTAACTCAGTCCGTACCTGCATCCACGGCTGTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTATCCTCAGAAGGACTGGCACAAGTTAATGGGGAAGAGGAAGGTACCGCAGAGAAACAGCCGTGGATaGAGGTACGGACTGAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: FYPQKDWHKLMGKRKVPQRNSRG*RYGLSY Trigger: GTAACTCAGTCCGTACCTGCATCCACGGCTGTTTCT...CTGCGGTACCTTCCTCTTCCCCATTAACTTGTGCCAGTCCTTCTGAGGATAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGCGCAGTCATGGTGACATTTTaGCTTTCTATCCTCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RVADSDESFCPEASGLCAVMVTF*LSILRR Trigger: CCTTCTGAGGATAGAAAGCCAAAATGTCACCATGAC...TGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGAGGACTTCAGAGGGAAGGAGCACGTaGGAGCAGAGTTTTAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: TEEEQSLDSPTQTDGRTSEGRST*EQSFKT Trigger: GGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTC...TGAAGTCCTCCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGCTCCTTTAGAAAGGCCCCAATGAGGCAAGAAACATACTTATCTGGCACCGAGGGAAGGAGCACGTaGGAGCAGAGTTTTAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: LGSFRKAPMRQETYLSGTEGRST*EQSFKT Trigger: GGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTC...GGTGCCAGATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGGCAACAGGAACAGCAGTCTCCAGAGGTTTATATGTTTCTATGGCGGCAGTTTTTCCCACAGAAATaGTGCGAGAAGAGACACACC | + |
|
Preference number: 2 (lower is better) Translates to: AGQQEQQSPEVYMFLWRQFFPQK*CEKRHT Trigger: GGTGTGTCTCTTCTCGCATCATTTCTGTGGGAAAAA...CTGCCGCCATAGAAACATATAAACCTCTGGAGACTGCTGTTCCTGTTGCCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAACCAGTCTGGTTCTTTTTCTCCAAATaGAGGAGCAGAAGAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGCAHGLRTAQDLYKPVWFFFSK*RSRRGS Trigger: TGACCCTCTTCTGCTCCTTCATTTGGAGAAAAAGAA...CCAGACTGGTTTATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCGTCACTGTGTCCTACACCTGACAGTTTCTTTTTCTCCAAATGAAGGAGCAGTACCCGGCGACTCTTaGCAAACACCTTTCTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: IRHCVLHLTVSFSPNEGAVPGDS*QTPFLG Trigger: GCCCAAGAAAGGTGTTTGCCAAGAGTCGCCGGGTAC...TGCTCCTTCATTTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGTGACGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAAGACTGCCTCTCCTGCTaGGCACTCGTCAAAGGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: WFALISVLQWPGSICHKKDCLSC*ALVKGR Trigger: TCGGCCTTTGACGAGTGCCCAGCAGGAGAGGCAGTC...TTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTGCTTGGAGGACCCAATGGCTTTATTTaGCACCACAAAGGCCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SIGGKHNATKITLVLLGGPNGFI*HHKGPQ Trigger: CTGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGG...TCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTTTGCACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGTACAGAGTGAATTCCTaGAAACCCAGGAGCTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RVCTEEEQSLDSPTQTDGYRVNS*KPRSLQ Trigger: CTGCAAGCTCCTGGGTTTCCAGGAATTCACTCTGTA...CCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CAA 90 bp | ATTTCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATaGCTTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ISIGGKHNATKITLV*LGGQWQSGRFRRVL Trigger: AAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCAGTTCCTCCAGCTTTTTCTCATAGCGACTCAGGAAGTAATCGTCAGGTTAGATACAGAGTTCTCTaGGCCTCATCTTGCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: PSVPPAFSHSDSGSNRQVRYRVL*ASSCPQ Trigger: CTGTGGGCAAGATGAGGCTCAGAGAACTCTGTATCT...AACCTGACGATTACTTCCTGAGTCGCTATGAGAAAAAGCTGGAGGAACTGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGACACTAGGACTGCTTTTCCAGCTGGGCGTCCTTTTGCTCCTTAGCCTTCAGTTAGAAAGGCCCCAATaGGGCAAGAAACATACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: QTLGLLFQLGVLLLLSLQLERPQ*GKKHTY Trigger: ATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAA...CTGAAGGCTAAGGAGCAAAAGGACGCCCAGCTGGAAAAGCAGTCCTAGTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCCAGGTAGCATCTGCCATAAGAAATAAAATCCCAGGCTACAGAAACTTTGAAGCTTCTGGGCTGTaGGCATGGACTCAGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: NGQVASAIRNKIPGYRNFEASGL*AWTQDS Trigger: GCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTC...AAAGTTTCTGTAGCCTGGGATTTTATTTCTTATGGCAGATGCTACCTGGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGCATTTCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTGCTATTCCGGATGTCCCTaGTTCTATCCAGACGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HAFLSEANTMPQRSLSYCYSGCP*FYPDGG Trigger: TCCCCCGTCTGGATAGAAGCAGGGACATCCGGAATA...GCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGAAATGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGGTCTTTGGAGGATTTTaGTCAGAATTCCATCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: SGRVADSDESFCPEASGLVFGGF*SEFHHF Trigger: GAAATGATGGAATTCTGACCAAAATCCTCCAAAGAC...CAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTTTGCACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGACTGTGTCCTACACCTaGCAGTTTCTTTTTCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RVCTEEEQSLDSPTQTDGTVSYT*QFLFLQ Trigger: TTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGT...CCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTTTGCACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGCAGAAGGATCCGGCTTaGATTTACAATGCTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RVCTEEEQSLDSPTQTDGQKDPA*IYNAFC Trigger: ACAGAAAGCATTGTAAATTCAAGCCGGATCCTTCTG...CCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGATGCGAGAAGAGACACACCCTTCTCACCAGGAGGGCTGTAGTGCCAGAAACGTCTTTGGAGGATTTTaGTCAGAATTCCATCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: MMREETHPSHQEGCSARNVFGGF*SEFHHF Trigger: GAAATGATGGAATTCTGACCAAAATCCTCCAAAGAC...GTTTCTGGCACTACAGCCCTCCTGGTGAGAAGGGTGTGTCTCTTCTCGCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGGCCAGGTAGCATCTGCCATAAGAAATAAAATCCCAGGCTACAGAAACTTTGCACCATGTGATCCCTaGAGGGAACCACAGTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NGQVASAIRNKIPGYRNFAPCDP*REPQSL Trigger: CAGAGACTGTGGTTCCCTCCAGGGATCACATGGTGC...AAAGTTTCTGTAGCCTGGGATTTTATTTCTTATGGCAGATGCTACCTGGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCAGTTCCTCCAGCTTTTTCTCATAGCGACTCAGGAAGTAATCGTCAGGTTCTGTATAAACCAGTCTaGAGGTCAGCACAGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PSVPPAFSHSDSGSNRQVLYKPV*RSAQTA Trigger: TGCTGTCTGTGCTGACCTCCAGACTGGTTTATACAG...AACCTGACGATTACTTCCTGAGTCGCTATGAGAAAAAGCTGGAGGAACTGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTAAAGGTCCTGATACTATCCAAACATCTTCAAATCTCTCCGTCAGCTCACGAGCTCAAGAACCCATCTaGGCACCCGTTTTGCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: VKGPDTIQTSSNLSVSSRAQEPI*APVLPD Trigger: ATCAGGCAAAACGGGTGCCCAGATGGGTTCTTGAGC...TCGTGAGCTGACGGAGAGATTTGAAGATGTTTGGATAGTATCAGGACCTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGACTTCAGGGTCATGAGGGAAGGAGCACGTGAGAGCAGAGTTTTAAAACCACTGCCATGGCTTCACTaGAAAACTTGTTATTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: EDFRVMREGARESRVLKPLPWLH*KTCYFL Trigger: CAGGAAATAACAAGTTTTCCAGTGAAGCCATGGCAG...TGGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCAGAGTTTTAAAACCATCTCAGCCACCTCGGATCCCAGAGAAGGACGACAAAAGGTTTCTGCCATaGCTTCACTGGAAAACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ESRVLKPSQPPRIPEKDDKRFLP*LHWKTC Trigger: ACAAGTTTTCCAGTGAAGCCATGGCAGAAACCTTTT...GTCGTCCTTCTCTGGGATCCGAGGTGGCTGAGATGGTTTTAAAACTCTGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTGCTTGGAGGATACAGAGTGAATTCCTaGAAACCCAGGAGCTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SIGGKHNATKITLVLLGGYRVNS*KPRSLQ Trigger: CTGCAAGCTCCTGGGTTTCCAGGAATTCACTCTGTA...TCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CAA 90 bp | GGAGGATTTTGGTCAGAATTCCATCATTTCTTGAAAATAAACCTGTaGGTCACAGGTGCTCAGTGCACACCGAGACAGACACTAGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: GGFWSEFHHFLKINL*VTGAQCTPRQTLGL Trigger: CAGTCCTAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGACCAACAGGTTTATTTTCAAGAAATGATGGAATTCTGACCAAAATCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGACTTCAGGGTCATGAGGGAAGGAGCACGTGAGAGCAGAGTTTTAAAACCATTAGAAAGGCCCCAATaGGGCAAGAAACATACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: EDFRVMREGARESRVLKPLERPQ*GKKHTY Trigger: ATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAA...TGGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCTTGTCTTTATTGTAAAGTCATGCATTTCTATCGGAGGCAAACACAATGCGTCAGGTTCCACCCCTaGGCTCTTCAAAGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PSCLYCKVMHFYRRQTQCVRFHP*ALQSFQ Trigger: CTGGAAGCTTTGAAGAGCTCAGGGGTGGAACCTGAC...GCATTGTGTTTGCCTCCGATAGAAATGCATGACTTTACAATAAAGACAAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAAACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGATGGGACAGCAGGGTTTaGACAGAGGAAGAACAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: YRNFLIQTRFFLSRESVGWDSRV*TEEEQS Trigger: TGACTGTTCTTCCTCTGTGCAAACCCTGCTGTCCCA...TCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTTTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATAAGAAATAAAATCCCAGGCTACAGAAACTTTCTGATACAGACAAGATTCGAAGCTTCTGGGCTGTaGGCATGGACTCAGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: AIRNKIPGYRNFLIQTRFEASGL*AWTQDS Trigger: GCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTC...GAATCTTGTCTGTATCAGAAAGTTTCTGTAGCCTGGGATTTTATTTCTTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTGAATACCAATGGTAAAGATACAGAGTTCTCTGAGCCTCATCTTGCCCACCGGAGGCAAACACAATaGCACAAAGATCACTCTCGT | + |
|
Preference number: 2 (lower is better) Translates to: LLNTNGKDTEFSEPHLAHRRQTQ*HKDHSR Trigger: ACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCG...GTGGGCAAGATGAGGCTCAGAGAACTCTGTATCTTTACCATTGGTATTCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATCCCAGAGAAGGACGACACTGAGTTTTGAGCCCCGAGTCTTTGGAGGATTTGTCTTTGGAGGATTTTaGTCAGAATTCCATCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSQRRTTLSFEPRVFGGFVFGGF*SEFHHF Trigger: GAAATGATGGAATTCTGACCAAAATCCTCCAAAGAC...AAATCCTCCAAAGACTCGGGGCTCAAAACTCAGTGTCGTCCTTCTCTGGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGCTCCTTTAGAAAGGCCCCAATGAGGCAAGAAACATACTTATCTGGCACCGTCATGGTGACATTTTaGCTTTCTATCCTCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGSFRKAPMRQETYLSGTVMVTF*LSILRR Trigger: CCTTCTGAGGATAGAAAGCCAAAATGTCACCATGAC...GGTGCCAGATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAAACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGACGGAGGCAAACACAATaGCACAAAGATCACTCTCGT | + |
|
Preference number: 2 (lower is better) Translates to: YRNFLIQTRFFLSRESVGRRQTQ*HKDHSR Trigger: ACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCG...TCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTTTCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAGAAACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGACTGTATAAACCAGTCTaGAGGTCAGCACAGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YRNFLIQTRFFLSRESVGLYKPV*RSAQTA Trigger: TGCTGTCTGTGCTGACCTCCAGACTGGTTTATACAG...TCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTTTCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGAAGCAACCCATCACCTCTTTTCTaGGGAGAGAAAGTAACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: NFLIQTRFFLSRESVGSNPSPLF*GEKVTD Trigger: ATCTGTTACTTTCTCTCCTCAGAAAAGAGGTGATGG...GTTGCTTCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCACTAGAAATGATGAAAGATTAAGAATTAAATCTCCCTCCCCGAGACAGGGAGGCCCAGGAATCTGCTaGACTGCAATCCAGAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ITRNDERLRIKSPSPRQGGPGIC*TAIQKN Trigger: GTTTTTCTGGATTGCAGTGCAGCAGATTCCTGGGCC...TCCCTGTCTCGGGGAGGGAGATTTAATTCTTAATCTTTCATCATTTCTAGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CCA 90 bp | AGTCATGCATTTCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATAGGAAGAACAGTCACTaGATTCTCCAACACAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: SHAFLSEANTMPQRSLSYRKNSH*ILQHRQ Trigger: CTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCT...ATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGAAATGCATGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCGTCACTGTGTCCTACACCTGACAGTTTCTTTTTCTCCAAATGAAGGAGCAGTCATGGTGACATTTTaGCTTTCTATCCTCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IRHCVLHLTVSFSPNEGAVMVTF*LSILRR Trigger: CCTTCTGAGGATAGAAAGCCAAAATGTCACCATGAC...TGCTCCTTCATTTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGTGACGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCGTCACTGTGTCCTACACCTGACAGTTTCTTTTTCTCCAAATGAAGGAGCATCGGATAACTGGGACTaGAACCCAATGGCTTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: IRHCVLHLTVSFSPNEGASDNWD*NPMALF Trigger: AAATAAAGCCATTGGGTTCCAGTCCCAGTTATCCGA...TGCTCCTTCATTTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGTGACGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGAAGCAACTCGGATAACTGGGACTaGAACCCAATGGCTTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: NFLIQTRFFLSRESVGSNSDNWD*NPMALF Trigger: AAATAAAGCCATTGGGTTCCAGTCCCAGTTATCCGA...GTTGCTTCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCATAAGAAATAAAATCCCAGGCTACAGAAACTTTCTGATACAGACAAGATTCAGATACAGAGTTCTCTaGGCCTCATCTTGCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: AIRNKIPGYRNFLIQTRFRYRVL*ASSCPQ Trigger: CTGTGGGCAAGATGAGGCTCAGAGAACTCTGTATCT...GAATCTTGTCTGTATCAGAAAGTTTCTGTAGCCTGGGATTTTATTTCTTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAATAAAAGATACAGAGTTCTCTaGGCCTCATCTTGCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: LLLFLSYNGQVASAIRNKRYRVL*ASSCPQ Trigger: CTGTGGGCAAGATGAGGCTCAGAGAACTCTGTATCT...TTTATTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATGCATTTCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATACTGTGTCCTACACCTaGCAGTTTCTTTTTCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SHAFLSEANTMPQRSLSYTVSYT*QFLFLQ Trigger: TTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGT...ATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGAAATGCATGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTCTTTATTGTAAAGTCATGCATTTCTATCGGAGGCAAACACAATGCCACAGACTCTGAGGCACCCTaGATGACTTCTGTTGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: LVFIVKSCISIGGKHNATDSEAP*MTSVEY Trigger: GTATTCAACAGAAGTCATCCAGGGTGCCTCAGAGTC...TGTGGCATTGTGTTTGCCTCCGATAGAAATGCATGACTTTACAATAAAGACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCATAAGAAATAAAATCCCAGGCTACAGAAACTTTCTGATACAGACAAGATTCCTGAGGCACCCTGGATaGCTTCTGTTGAATACCAAT | + |
|
Preference number: 2 (lower is better) Translates to: AIRNKIPGYRNFLIQTRFLRHPG*LLLNTN Trigger: ATTGGTATTCAACAGAAGTCATCCAGGGTGCCTCAG...GAATCTTGTCTGTATCAGAAAGTTTCTGTAGCCTGGGATTTTATTTCTTATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAATAAAGAACCCCGATTCAACTaGAGAGAATCCAGCATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLFLSYNGQVASAIRNKEPRFN*RESSIH Trigger: GTGAATGCTGGATTCTCTGCAGTTGAATCGGGGTTC...TTTATTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCTTGTCTTTATTGTAAAGTCATGCATTTCTATCGGAGGCAAACACAATGCGGCTTGAATTTACAATaGTTTCTGTCAGCGTCACCG | + |
|
Preference number: 2 (lower is better) Translates to: PSCLYCKVMHFYRRQTQCGLNLQ*FLSASP Trigger: CGGTGACGCTGACAGAAAGCATTGTAAATTCAAGCC...GCATTGTGTTTGCCTCCGATAGAAATGCATGACTTTACAATAAAGACAAGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAATAAACTGTATAAACCAGTCTaGAGGTCAGCACAGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLLFLSYNGQVASAIRNKLYKPV*RSAQTA Trigger: TGCTGTCTGTGCTGACCTCCAGACTGGTTTATACAG...TTTATTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAATAAAGGGACTGGAACCCAATaGCTTTATTTGGCACCACAA | + |
|
Preference number: 2 (lower is better) Translates to: LLLFLSYNGQVASAIRNKGTGTQ*LYLAPQ Trigger: TTGTGGTGCCAAATAAAGCCATTGGGTTCCAGTCCC...TTTATTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCACTAGAAATGATGAAAGATTAAGAATTAAATCTCCCTCCCCGAGACAGGGATTAGAAAGGCCCCAATaGGGCAAGAAACATACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: ITRNDERLRIKSPSPRQGLERPQ*GKKHTY Trigger: ATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAA...TCCCTGTCTCGGGGAGGGAGATTTAATTCTTAATCTTTCATCATTTCTAGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAATAAAGTCATGGTGACATTTTaGCTTTCTATCCTCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLLFLSYNGQVASAIRNKVMVTF*LSILRR Trigger: CCTTCTGAGGATAGAAAGCCAAAATGTCACCATGAC...TTTATTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCCAGGTAGCATCTGCCATAAGAAATAAAATCCCAGGCTACAGAAACTTTGCTGTCTTTTTGGTTTaGTCTTATTTCTGTCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: NGQVASAIRNKIPGYRNFAVFLV*SYFCLT Trigger: TGTAAGACAGAAATAAGAGCAAACCAAAAAGACAGC...AAAGTTTCTGTAGCCTGGGATTTTATTTCTTATGGCAGATGCTACCTGGCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | GACCTTGGGCCCAGGCTATACCTACCTGTGGTGTGCTaGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCG | + |
|
Preference number: 3 (lower is better) Translates to: DLGPRLYLPVVC*SSRQQDQRYPA Trigger: CGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCACAGGTAGGTATAGCCTGGGCCCAAGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR GCA 72 bp | TCGGACCTTGGGCCCAGGCTATACCTACCTGTGGTGTaGTGGTCCAGCAGACAGCAGGACCAGAGGTACCCG | + |
|
Preference number: 3 (lower is better) Translates to: SDLGPRLYLPVV*WSSRQQDQRYP Trigger: CGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCACAGGTAGGTATAGCCTGGGCCCAAGGTCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | CAACAGGAGGAGGAGCTCGGCTGCATAAACACATGGTaGGAACCTGGGGCACAGGCAGGAGGAGCCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QQEEELGCINTW*EPGAQAGGASA Trigger: GGCTGAGGCTCCTCCTGCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR GCA 72 bp | CAGAGGAGAGCACGGCAACAGGAGGAGGAGCTCGGCTaGATAAACACATGGTGGGAACCTGGGGCACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QRRARQQEEELG*INTWWEPGAQA Trigger: TGCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGTTGCCGTGCTCTCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR GCA 72 bp | GAACTGCAGGGCTTTCACAGGTGCACAGGCTGTGGGTaGAGTTGGCAGGGCACATCCTACCCCTCACAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ELQGFHRCTGCG*SWQGTSYPSQA Trigger: GGCTTGTGAGGGGTAGGATGTGCCCTGCCAACTGCACCCACAGCCTGTGCACCTGTGAAAGCCCTGCAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR GCA 72 bp | CCCACTTCCACCAGTCAGGCCTCCTCTCCCAAGAACTaGAGGGCTTTCACAGGTGCACAGGCTGTGGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PTSTSQASSPKN*RAFTGAQAVGA Trigger: TGCACCCACAGCCTGTGCACCTGTGAAAGCCCTGCAGTTCTTGGGAGAGGAGGCCTGACTGGTGGAAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | CAGGGCTTTCACAGGTGCACAGGCTGTGGGTGCAGTTaGCAGGGCACATCCTACCCCTCACAAGCCGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: QGFHRCTGCGCS*QGTSYPSQAVN Trigger: GTTAACGGCTTGTGAGGGGTAGGATGTGCCCTGCCAACTGCACCCACAGCCTGTGCACCTGTGAAAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAGGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCTCTCTGAGCCTCATCTaGCCCACAGGTAAGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGGGARLHKHMVGTWGTGSLSLI*PTGKMG Trigger: TCCCATCTTACCTGTGGGCAAGATGAGGCTCAGAGA...GCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAAACTCTCTGAGCCTCATCTaGCCCACAGGTAAGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CAGPADSRTRGTRRLLANSLSLI*PTGKMG Trigger: TCCCATCTTACCTGTGGGCAAGATGAGGCTCAGAGA...GTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAGGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCGCTTCACTGGAAAACTaGTTATTTCCTGCCGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGGGARLHKHMVGTWGTGASLEN*LFPAGA Trigger: GGCCCCGGCAGGAAATAACAAGTTTTCCAGTGAAGC...GCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | CCAGAAGGCTCAGCCCAAGAACCTGAGGGAGCCCACTaGGGTGACGAACAGACAGTGACCCCACTCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PEGSAQEPEGAH*GDEQTVTPLRF Trigger: AAACCTGAGTGGGGTCACTGTCTGTTCGTCACCTCAGTGGGCTCCCTCAGGTTCTTGGGCTGAGCCTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | CACAGACAGCAGCTGCTCTTTCCCCAGGCAATGAGCTaGTTCGGACCTTGGGCCCAGGCTATACCTACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HRQQLLFPQAMS*FGPWAQAIPTC Trigger: ACAGGTAGGTATAGCCTGGGCCCAAGGTCCGAACCAGCTCATTGCCTGGGGAAAGAGCAGCTGCTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | ATACCCTCTCAGATGAGGCAGGGCGCACAGGTGACATaGAGGCACACAGGATCATGCCAGTGTCAGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IPSQMRQGAQVT*RHTGSCQCQAA Trigger: TGCAGCCTGACACTGGCATGATCCTGTGTGCCTCCATGTCACCTGTGCGCCCTGCCTCATCTGAGAGGGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | GATCCGACAGCGCTGGGATTCCAGTCCACTATGGTATaGGAGGCAGGGCAACAGGAACAGCAGTCTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DPTALGFQSTMV*EAGQQEQQSPE Trigger: CTCTGGAGACTGCTGTTCCTGTTGCCCTGCCTCCCATACCATAGTGGACTGGAATCCCAGCGCTGTCGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAGGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCTGGCAAACACCTTTCTaGGGCTCCTTTAGAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGGGARLHKHMVGTWGTGWQTPF*GSFRKA Trigger: GGCCTTTCTAAAGGAGCCCAAGAAAGGTGTTTGCCA...GCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAAACACCTTTCGCTTCACTGGAAAACTaGTTATTTCCTGCCGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VQQTAGPEVPGDSWQTPFASLEN*LFPAGA Trigger: GGCCCCGGCAGGAAATAACAAGTTTTCCAGTGAAGC...GAAAGGTGTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | AACCTGAGGGAGCCCACTGAGGTGACGAACAGACAGTaGCCCCACTCAGGTTTGACTGGCTACAACGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NLREPTEVTNRQ*PHSGLTGYNVC Trigger: GCAGACGTTGTAGCCAGTCAAACCTGAGTGGGGTCACTGTCTGTTCGTCACCTCAGTGGGCTCCCTCAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR GCA 72 bp | GACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTaGCCAGAAGCTTCTGGGCTGTGCGCATGGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DSGRVADSDESF*PEASGLCAWTQ Trigger: CTGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR GCA 72 bp | GACATGGAGGCACACAGGATCATGCCAGTGTCAGGCTaGAAACTGAGCACAGCTCTGCAGGAAGCCATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DMEAHRIMPVSG*KLSTALQEAIP Trigger: GGGAATGGCTTCCTGCAGAGCTGTGCTCAGTTTGCAGCCTGACACTGGCATGATCCTGTGTGCCTCCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | CAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTaGCAAACACCTTTCTTGGGCTCCTTTAGAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QQTAGPEVPGDS*QTPFLGSFRKA Trigger: GGCCTTTCTAAAGGAGCCCAAGAAAGGTGTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAGGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCTTGAGCCCCGAGTCTTaGGAGGATTTTGGTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGGGARLHKHMVGTWGTGLSPES*EDFGQN Trigger: ATTCTGACCAAAATCCTCCAAAGACTCGGGGCTCAA...GCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGACTGGAACCCAATGGCTTTATTTGGCACCACAAAGGCCCCCAGCGCCAACCCAATGGCTTTATTaGGCACCACAAAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TGTGTQWLYLAPQRPPAPTQWLY*APQRPP Trigger: TGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGGT...TGGCGCTGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGGTTCCAGTCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | AGCCTGGTCATTTCTTCAGACCAGGAACTGGAAGGGTaGATGGCCCAGAAGGCTCAGCCCAAGAACCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLVISSDQELEG*MAQKAQPKNLR Trigger: CCTCAGGTTCTTGGGCTGAGCCTTCTGGGCCATTCACCCTTCCAGTTCCTGGTCTGAAGAAATGACCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR TCA 72 bp | AGGCACACAGGATCATGCCAGTGTCAGGCTGCAAACTaGGCACAGCTCTGCAGGAAGCCATTCCCTCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RHTGSCQCQAAN*AQLCRKPFPQE Trigger: CTCTTGAGGGAATGGCTTCCTGCAGAGCTGTGCTCAGTTTGCAGCCTGACACTGGCATGATCCTGTGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | GGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTaGGCTGTGCGCATGGACTCAGGACAGCTCAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: GRFRRVLLPRSF*AVRMDSGQLKI Trigger: GATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | TCACCTGGAACTCGGATAACTGGGACTGGAACCCAATaGCTTTATTTGGCACCACAAAGGCCCCCAGCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPGTRITGTGTQ*LYLAPQRPPAP Trigger: TGGCGCTGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGGTTCCAGTCCCAGTTATCCGAGTTCCAGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | CTGAGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCTaGCCACAGACCGGGCTCCATCAATCTTCCTCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSSSKLPEPSPV*PQTGLHQSSSC Trigger: GCACGAGGAAGATTGATGGAGCCCGGTCTGTGGCCAGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCACCCCTGAGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCTGGCCACAGACTCTCTGAGCCTCATCTaGCCCACAGGTAAGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: STPELFKASRTFSSLATDSLSLI*PTGKMG Trigger: TCCCATCTTACCTGTGGGCAAGATGAGGCTCAGAGA...GTCTGTGGCCAGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAGGGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCACCCCTGAGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCTGGCCACAACCCAATGGCTTTATTaGGCACCACAAAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSTPELFKASRTFSSLATTQWLY*APQRPP Trigger: TGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGGT...TGTGGCCAGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAGGGGTGGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | AAACTTGTTATTTCCTGCCGGGGCCATGTGGCCTCGTaGCCAGCCACTCCCGATATAGTCTTCATTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLVISCRGHVAS*PATPDIVFIEG Trigger: GCCCTCAATGAAGACTATATCGGGAGTGGCTGGTCACGAGGCCACATGGCCCCGGCAGGAAATAACAAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR GCA 72 bp | AGCACTGGCTGCTCTTGCAGAGAACCCCGATTCAACTaGAGAGAATCCAGCATTCACACGGTGGCTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: STGCSCREPRFN*RESSIHTVAQN Trigger: GTTCTGAGCCACCGTGTGAATGCTGGATTCTCTGCAGTTGAATCGGGGTTCTCTGCAAGAGCAGCCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | TATTTGATCCGACAGCGCTGGGATTCCAGTCCACTATaGTATGGGAGGCAGGGCAACAGGAACAGCAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YLIRQRWDSSPL*YGRQGNRNSSL Trigger: GAGACTGCTGTTCCTGTTGCCCTGCCTCCCATACCATAGTGGACTGGAATCCCAGCGCTGTCGGATCAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | AGACCTGACATCTTCTCCAGGTCATGGAGGCTCACCTaGAACTCGGATAACTGGGACTGGAACCCAATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPDIFSRSWRLT*NSDNWDWNPMA Trigger: AGCCATTGGGTTCCAGTCCCAGTTATCCGAGTTCCAGGTGAGCCTCCATGACCTGGAGAAGATGTCAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | GGGAAAAACACCAGACCTGACATCTTCTCCAGGTCATaGAGGCTCACCTGGAACTCGGATAACTGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GKNTRPDIFSRS*RLTWNSDNWDW Trigger: CCAGTCCCAGTTATCCGAGTTCCAGGTGAGCCTCCATGACCTGGAGAAGATGTCAGGTCTGGTGTTTTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCTGTGCGCATGGACTCAGGACAGCTCAAGATCTGTATAAACCAGTCTGGTCACTCTCGTATTGCTaGGAGGACAGTGGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGCAHGLRTAQDLYKPVWSLSYC*EDSGRV Trigger: CACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGA...CCAGACTGGTTTATACAGATCTTGAGCTGTCCTGAGTCCATGCGCACAGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | ATGGGAGGACTTCAGGGTCATGAGGGAAGGAGCACGTaGGAGCAGAGTTTTAAAACCATCTCAGCCACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: MGGLQGHEGRST*EQSFKTISATS Trigger: CGAGGTGGCTGAGATGGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | GGGACAGCAGGGTTTGCACAGAGGAAGAACAGTCACTaGATTCTCCAACACAGACAGATGGGAGGACTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GTAGFAQRKNSH*ILQHRQMGGLQ Trigger: CTGAAGTCCTCCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAACCCTGCTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | GGACTCAGGACAGCTCAAGATCTGTATAAACCAGTCTaGAGGTCAGCACAGACAGCAGCTGCTCTTTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLRTAQDLYKPV*RSAQTAAALSP Trigger: TGGGGAAAGAGCAGCTGCTGTCTGTGCTGACCTCCAGACTGGTTTATACAGATCTTGAGCTGTCCTGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | TCATGGAGGCTCACCTGGAACTCGGATAACTGGGACTaGAACCCAATGGCTTTATTTGGCACCACAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SWRLTWNSDNWD*NPMALFGTTKA Trigger: GGCCTTTGTGGTGCCAAATAAAGCCATTGGGTTCCAGTCCCAGTTATCCGAGTTCCAGGTGAGCCTCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | CAGAACCATCTGGGATTCCATTTCCAGGGTATCCAATaGGCTCTTCTAACCTCTGTGGGCAACAGGCACTCG | + |
|
Preference number: 3 (lower is better) Translates to: QNHLGFHFQGIQ*ALLTSVGNRHS Trigger: CGAGTGCCTGTTGCCCACAGAGGTTAGAAGAGCTCATTGGATACCCTGGAAATGGAATCCCAGATGGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR GCA 72 bp | CACTCGTCAAAGGCCGAAGAGAAGGGTAGAGGTCTCTaGTGGTTAAGATGTAAGAGCAGAAATGGCAGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: HSSKAEEKGRGL*WLRCKSRNGSA Trigger: TGCGCTGCCATTTCTGCTCTTACATCTTAACCAGCAGAGACCTCTACCCTTCTCTTCGGCCTTTGACGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR GCA 72 bp | GGATATATGCTCAAGAACCCATCTGGGCACCCGTTTTaGCTGATCGTAAGACAGGGCGTGGTTAGTGTAACG | + |
|
Preference number: 3 (lower is better) Translates to: GYMLKNPSGHPF*LIVRQGVVSVT Trigger: CGTTACACTAACCACGCCCTGTCTTACGATCAGGCAAAACGGGTGCCCAGATGGGTTCTTGAGCATATATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | GGTGACGAACAGACAGTGACCCCACTCAGGTTTGACTaGCTACAACGTCTGCCTCTGACACATTTGATACTC | + |
|
Preference number: 3 (lower is better) Translates to: GDEQTVTPLRFD*LQRLPLTHLIL Trigger: GAGTATCAAATGTGTCAGAGGCAGACGTTGTAGCCAGTCAAACCTGAGTGGGGTCACTGTCTGTTCGTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCTCCTTTAGAAAGGCCCCAATGAGGCAAGAAACATACTTATCTGGCACCTCTCTGAGCCTCATCTaGCCCACAGGTAAGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGSFRKAPMRQETYLSGTSLSLI*PTGKMG Trigger: TCCCATCTTACCTGTGGGCAAGATGAGGCTCAGAGA...GGTGCCAGATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | ATAGCGACTCAGGAAGTAATCGTCAGGTTCCACCCCTaGGCTCTTCAAAGCTTCCAGAACCTTCTCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IATQEVIVRFHP*ALQSFQNLLQS Trigger: AGACTGGAGAAGGTTCTGGAAGCTTTGAAGAGCTCAGGGGTGGAACCTGACGATTACTTCCTGAGTCGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR GCA 72 bp | TTTGATACTCAAGTATGGCCCAGGAATCTGCTGCACTaGAATCCAGAAAAACGGACAGTCACACTGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FDTQVWPRNLLH*NPEKRTVTLRG Trigger: GCCCCTCAGTGTGACTGTCCGTTTTTCTGGATTGCAGTGCAGCAGATTCCTGGGCCATACTTGAGTATCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | GAGAATCCAGCATTCACACGGTGGCTCAGAACCATCTaGGATTCCATTTCCAGGGTATCCAATGAGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ENPAFTRWLRTI*DSISRVSNELF Trigger: GAAGAGCTCATTGGATACCCTGGAAATGGAATCCCAGATGGTTCTGAGCCACCGTGTGAATGCTGGATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CCA 72 bp | TCGTCAAAGGCCGAAGAGAAGGGTAGAGGTCTCTGCTaGTTAAGATGTAAGAGCAGAAATGGCAGCGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSKAEEKGRGLC*LRCKSRNGSAV Trigger: AACTGCGCTGCCATTTCTGCTCTTACATCTTAACCAGCAGAGACCTCTACCCTTCTCTTCGGCCTTTGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CAA 90 bp | TCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTGCTTGGAGGATCACTCTCGTATTGCTaGGAGGACAGTGGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SIGGKHNATKITLVLLGGSLSYC*EDSGRV Trigger: CACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGA...TCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | ACTCCCGATATAGTCTTCATTGAGGGCGCTGAAGGCTaGAGGGACAGAAGGATCCGGCTTGAATTTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: TPDIVFIEGAEG*RDRRIRLEFTM Trigger: CATTGTAAATTCAAGCCGGATCCTTCTGTCCCTTCAGCCTTCAGCGCCCTCAATGAAGACTATATCGGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | CAAACACAATGCCACAAAGATCACTCTCGTATTGCTTaGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QTQCHKDHSRIA*RTVAEWQIQTS Trigger: ACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | CATGGTGACATTTTGGCTTTCTATCCTCAGAAGGACTaGCACAAGTTAATGGGGAAGAGGAAGGTACCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HGDILAFYPQKD*HKLMGKRKVPQ Trigger: CTGCGGTACCTTCCTCTTCCCCATTAACTTGTGCCAGTCCTTCTGAGGATAGAAAGCCAAAATGTCACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTCTCTGCTGGTTAAGATGTAAGAGCAGAAATGGCAGCGCAGTTCAGGGGAGGCGTGCTGTCTTTTaGGTTTGCTCTTATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGLCWLRCKSRNGSAVQGRRAVF*VCSYFC Trigger: ACAGAAATAAGAGCAAACCAAAAAGACAGCACGCCT...CCCCTGAACTGCGCTGCCATTTCTGCTCTTACATCTTAACCAGCAGAGACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CAA 90 bp | CATGCATTTCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTGCACCCAATGGCTTTATTaGGCACCACAAAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HAFLSEANTMPQRSLSYCTQWLY*APQRPP Trigger: TGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGGT...GCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGAAATGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCGTCACTGTGTCCTACACCTGACAGTTTCTTTTTCTCCAAATGAAGGAGCATGGCAAACACCTTTCTaGGGCTCCTTTAGAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: IRHCVLHLTVSFSPNEGAWQTPF*GSFRKA Trigger: GGCCTTTCTAAAGGAGCCCAAGAAAGGTGTTTGCCA...TGCTCCTTCATTTGGAGAAAAAGAAACTGTCAGGTGTAGGACACAGTGACGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR GCA 72 bp | CCATCATTTCTTGAAAATAAACCTGTTGGTCACAGGTaGTCAGTGCACACCGAGACAGACACTAGGACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSFLENKPVGHR*SVHTETDTRTA Trigger: AGCAGTCCTAGTGTCTGTCTCGGTGTGCACTGAGCACCTGTGACCAACAGGTTTATTTTCAAGAAATGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | GGCAAGAAACATACTTATCTGGCACCATGTGATCCCTaGAGGGAACCACAGTCTCTGGTTAAACCCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GKKHTYLAPCDP*REPQSLVKPTK Trigger: TTTTGTGGGTTTAACCAGAGACTGTGGTTCCCTCCAGGGATCACATGGTGCCAGATAAGTATGTTTCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCCTGCTTCTATCCAGACGGGGGAAAAACACCAGACCTGACATCTTCTCCAGTCTTTGGAGGATTTaGGTCAGAATTCCATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: MSLLLSRRGKNTRPDIFSSLWRI*VRIPSF Trigger: AAATGATGGAATTCTGACCAAAATCCTCCAAAGACT...GGAGAAGATGTCAGGTCTGGTGTTTTTCCCCCGTCTGGATAGAAGCAGGGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCCAGGTAGCATCTGCCATAAGAAATAAAATCCCAGGCTACAGAAACTTTTCACTCTCGTATTGCTaGGAGGACAGTGGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NGQVASAIRNKIPGYRNFSLSYC*EDSGRV Trigger: CACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGA...AAAGTTTCTGTAGCCTGGGATTTTATTTCTTATGGCAGATGCTACCTGGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CCA 72 bp | ACAACGTCTGCCTCTGACACATTTGATACTCAAGTATaGCCCAGGAATCTGCTGCACTGCAATCCAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TTSASDTFDTQV*PRNLLHCNPEK Trigger: TTTTTCTGGATTGCAGTGCAGCAGATTCCTGGGCCATACTTGAGTATCAAATGTGTCAGAGGCAGACGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR TCA 72 bp | CCATCTAACTCTGTCTTGACTCTGAGGCACCCTGGATaGCTTCTGTTGAATACCAATGGTAAAGATACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSNSVLTLRHPG*LLLNTNGKDTE Trigger: CTCTGTATCTTTACCATTGGTATTCAACAGAAGTCATCCAGGGTGCCTCAGAGTCAAGACAGAGTTAGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR TCA 72 bp | AAACACCTTTCTTGGGCTCCTTTAGAAAGGCCCCAATaGGGCAAGAAACATACTTATCTGGCACCATGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: KHLSWAPLERPQ*GKKHTYLAPCD Trigger: ATCACATGGTGCCAGATAAGTATGTTTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAAGAAAGGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGAAGCAACACAGAAGGATCCGGCTaGAATTTACAATGCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NFLIQTRFFLSRESVGSNTEGSG*NLQCFL Trigger: CAGAAAGCATTGTAAATTCAAGCCGGATCCTTCTGT...GTTGCTTCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTATCGGAGGCAAACACAATGCCACAAAGATCACTCTCGTATTGCTTGGAGGAAGTCTTTGGAGGATTTaGGTCAGAATTCCATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SIGGKHNATKITLVLLGGSLWRI*VRIPSF Trigger: AAATGATGGAATTCTGACCAAAATCCTCCAAAGACT...TCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCCGATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCAGCGTCACCGATGATCTTGTCCTTGGATATATGCTCAAGAACCCATCTAGTCTTTGGAGGATTTaGGTCAGAATTCCATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SVSVTDDLVLGYMLKNPSSLWRI*VRIPSF Trigger: AAATGATGGAATTCTGACCAAAATCCTCCAAAGACT...AGATGGGTTCTTGAGCATATATCCAAGGACAAGATCATCGGTGACGCTGACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAAACAGAAGGATCCGGCTaGAATTTACAATGCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WFALISVLQWPGSICHKKTEGSG*NLQCFL Trigger: CAGAAAGCATTGTAAATTCAAGCCGGATCCTTCTGT...TTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAACAAAGACCAAAGAACTaGAAGACATCACTAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: WFALISVLQWPGSICHKKQRPKN*KTSLEM Trigger: CATTTCTAGTGATGTCTTCAAGTTCTTTGGTCTTTG...TTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAAACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAATAAAAGTCTTTGGAGGATTTaGGTCAGAATTCCATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLFLSYNGQVASAIRNKSLWRI*VRIPSF Trigger: AAATGATGGAATTCTGACCAAAATCCTCCAAAGACT...TTTATTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGTGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGTCAGGTTCCACCCCTaGGCTCTTCAAAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVVCWSSRQQDQRYPATLVRFHP*ALQSFQ Trigger: CTGGAAGCTTTGAAGAGCTCAGGGGTGGAACCTGAC...AAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACACCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CAA 72 bp | GCTGCTCTTTCCCCAGGCAATGAGCTGGTTCGGACCTaGGGCCCAGGCTATACCTACCTGTGGTGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AALSPGNELVRT*GPGYTYLWCAG Trigger: ACCAGCACACCACAGGTAGGTATAGCCTGGGCCCAAGGTCCGAACCAGCTCATTGCCTGGGGAAAGAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| CDS-3UTR CCA 90 bp | TATTGCTTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCACCTGCCGGGGCCATGTaGCCTCGTGACCAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: YCLEDSGRVADSDESFCPPAGAM*PRDQPL Trigger: GAGTGGCTGGTCACGAGGCCACATGGCCCCGGCAGG...TGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTTCCCAGGGCTGCTGGAGAAACACTCAGGCCCCGCCATCACCTCTTTTTATTCCGGATGTCCCTaGTTCTATCCAGACGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASFPGLLEKHSGPAITSFYSGCP*FYPDGG Trigger: TCCCCCGTCTGGATAGAAGCAGGGACATCCGGAATA...AAAAGAGGTGATGGCGGGGCCTGAGTGTTTCTCCAGCAGCCCTGGGAAGGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGGAGGAGCTCGGCTGCATAAACACATGGTGGGAACCTGGGGCACAGGCGCTCAAGAACCCATCTaGGCACCCGTTTTGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGGGARLHKHMVGTWGTGAQEPI*APVLPD Trigger: ATCAGGCAAAACGGGTGCCCAGATGGGTTCTTGAGC...GCCTGTGCCCCAGGTTCCCACCATGTGTTTATGCAGCCGAGCTCCTCCTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGGTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAAACGCTCAAGAACCCATCTaGGCACCCGTTTTGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CAGPADSRTRGTRRLLANAQEPI*APVLPD Trigger: ATCAGGCAAAACGGGTGCCCAGATGGGTTCTTGAGC...GTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGACCAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
||
| CDS-3UTR GCA 90 bp | CAGACACTAGGACTGCTTTTCCAGCTGGGCGTCCTTTTGCTCCTTAGCCTTCAGCTGTACCAGGCACTGTaGTGCACCGTGTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLGLLFQLGVLLLLSLQLYQAL*CTVWLP Trigger: AGGCAGCCACACGGTGCAGCACAGTGCCTGGTACAG...CTGAAGGCTAAGGAGCAAAAGGACGCCCAGCTGGAAAAGCAGTCCTAGTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164213.5 |
||
| 3UTR CAA 72 bp | GGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTaGCCCAGAAGCTTCTGGGCTGTGCGCATGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQWQSGRFRRVL*PRSFWAVRMDS Trigger: TGAGTCCATGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGCTTCTGCGAGCCAGGATCACCTTGTAAAGGTGCGAGGGGACGGCCACTTGTCCTTGGATATATaGTCAAGAACCCATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRASASQDHLVKVRGDGHLSLDI*SRTHLG Trigger: GCCCAGATGGGTTCTTGAGCATATATCCAAGGACAA...GTGGCCGTCCCCTCGCACCTTTACAAGGTGATCCTGGCTCGCAGAAGCCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214140.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGCGCATGGACTGCTCAGGTACAGAGTaGATTCCTGGAAACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRFRRVLLPRSFWAVRMDCSGTE*IPGNPG Trigger: TCCTGGGTTTCCAGGAATTCACTCTGTACCTGAGCA...GTCCATGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGCGCATCATGGAGGCTCACCTaGAACTCGGATAACTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVADSDESFCPEASGLCASWRLT*NSDNWD Trigger: GTCCCAGTTATCCGAGTTCCAGGTGAGCCTCCATGA...TGCGCACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CAA 72 bp | CCAGAGGTACCCGGCGACTCTTGGCAAACACCTTTCTaGGGCTCCTTTAGAAAGGCCCCAATGAGGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PEVPGDSWQTPF*GSFRKAPMRQE Trigger: TTCTTGCCTCATTGGGGCCTTTCTAAAGGAGCCCAAGAAAGGTGTTTGCCAAGAGTCGCCGGGTACCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CAA 72 bp | AAATCTGAGATCGGGGCTCAAGAGCACTGGCTGCTCTaGCAGAGAACCCCGATTCAACTGCAGAGAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSEIGAQEHWLL*QRTPIQLQRIQ Trigger: CTGGATTCTCTGCAGTTGAATCGGGGTTCTCTGCAAGAGCAGCCAGTGCTCTTGAGCCCCGATCTCAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR TCA 90 bp | AGACACACCCTTCTCACCAGGAGGGCTGTAGTGCCAGAAACAGCCGTGGATGCATGCCATGGCTTCCGATaGTCTTGTCCTTGGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: RHTLLTRRAVVPETAVDACHGFR*SCPWIY Trigger: ATATATCCAAGGACAAGATCATCGGAAGCCATGGCA...TGCATCCACGGCTGTTTCTGGCACTACAGCCCTCCTGGTGAGAAGGGTGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214140.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCCAGAAGCTTCTGGGCTGTGGGACTGGAACCCAATaGCTTTATTTGGCACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VAEWQIQTSPFAQKLLGCGTGTQ*LYLAPQ Trigger: TTGTGGTGCCAAATAAAGCCATTGGGTTCCAGTCCC...ACAGCCCAGAAGCTTCTGGGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR GCA 90 bp | GTTTGCACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGAGGAAACTTGTTATTTCCTaGCGGGGCCATGTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VCTEEEQSLDSPTQTDGRKLVIS*RGHVAS Trigger: CGAGGCCACATGGCCCCGGCAGGAAATAACAAGTTT...CCTCCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CAA 72 bp | CAGACACTAGGACTGCTTTTCCAGCTGGGCGTCCTTTaGCTCCTTAGCCTTCAGTTCCTCCAGCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLGLLFQLGVL*LLSLQFLQLFL Trigger: GAGAAAAAGCTGGAGGAACTGAAGGCTAAGGAGCAAAAGGACGCCCAGCTGGAAAAGCAGTCCTAGTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAAGAGGGCGCTGAAGGCTaGAGGGACAGAAGGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WFALISVLQWPGSICHKKEGAEG*RDRRIR Trigger: CCGGATCCTTCTGTCCCTTCAGCCTTCAGCGCCCTC...TTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR GCA 90 bp | AGGGTCATGAGGGAAGGAGCACGTGAGAGCAGAGTTTTAAAACCATCTCAGCCACAAGACAGCTTCTTCTaGAGATTCGTGTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVMREGARESRVLKPSQPQDSFF*RFVWLP Trigger: AGGCAGCCACACGAATCTGCAGAAGAAGCTGTCTTG...TGGCTGAGATGGTTTTAAAACTCTGCTCTCACGTGCTCCTTCCCTCATGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
||
| CDS-3UTR GCA 90 bp | AACACAGACAGATGGGAGGACTTCAGGGTCATGAGGGAAGGAGCACGTGAGAGCCAAGACAGCTTCTTCTaGAGATTTGAAGGCCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: NTDRWEDFRVMREGARESQDSFF*RFEGQF Trigger: GAATTGGCCTTCAAATCTGCAGAAGAAGCTGTCTTG...GCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTCCCATCTGTCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164213.5 |
||
| CDS-3UTR CCA 90 bp | AACACAGACAGATGGGAGGACTTCAGGGTCATGAGGGAAGGAGCACGTGAGAGCTCGGATAACTGGGACTaGAACCCAATGGCTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NTDRWEDFRVMREGARESSDNWD*NPMALF Trigger: AAATAAAGCCATTGGGTTCCAGTCCCAGTTATCCGA...GCTCTCACGTGCTCCTTCCCTCATGACCCTGAAGTCCTCCCATCTGTCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGGCAACAGGAACAGCAGTCTCCAGAGGTTTATATGTTTCTATGGCGGCTACAGAGTGAATTCCTaGAAACCCAGGAGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGNRNSSLQRFICFYGGYRVNS*KPRSLQ Trigger: CTGCAAGCTCCTGGGTTTCCAGGAATTCACTCTGTA...GCCGCCATAGAAACATATAAACCTCTGGAGACTGCTGTTCCTGTTGCCCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CAA 72 bp | GGAGGCAAACACAATGCCACAAAGATCACTCTCGTATaGCTTGGAGGACAGTGGCAGAGTGGCAGATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGKHNATKITLV*LGGQWQSGRFR Trigger: TCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACGAGAGTGATCTTTGTGGCATTGTGTTTGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| 3UTR CAA 72 bp | CAATGCTTTCTGTCAGCGTCACCGATGATCTTGTCCTaGGATATATGCTCAAGAACCCATCTGGGCACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QCFLSASPMILS*DICSRTHLGTR Trigger: ACGGGTGCCCAGATGGGTTCTTGAGCATATATCCAAGGACAAGATCATCGGTGACGCTGACAGAAAGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164213.5 ENSMUST00000214462.2 |
||
| CDS-3UTR GCA 90 bp | TGGGACAGCAGGGTTTGCACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGTTGTCCTTGGATATATaGTCAAGAACCCATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WDSRVCTEEEQSLDSPTQLSLDI*SRTHLG Trigger: GCCCAGATGGGTTCTTGAGCATATATCCAAGGACAA...CTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGTGCAAACCCTGCTGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
||
| 3UTR CAA 72 bp | AGGTTTGACTGGCTACAACGTCTGCCTCTGACACATTaGATACTCAAGTATGGCCCAGGAATCTGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RFDWLQRLPLTH*ILKYGPGICCT Trigger: AGTGCAGCAGATTCCTGGGCCATACTTGAGTATCAAATGTGTCAGAGGCAGACGTTGTAGCCAGTCAAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR GCA 90 bp | CAGAAACAGCCGTGGATGCAGGTACGGACTGAGTTACATCCATCTAACTCTGTCGGCTTGAATTTACAATaGTTTCTGTCAGCGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: QKQPWMQVRTELHPSNSVGLNLQ*FLSASP Trigger: CGGTGACGCTGACAGAAAGCATTGTAAATTCAAGCC...GACAGAGTTAGATGGATGTAACTCAGTCCGTACCTGCATCCACGGCTGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGAAGAACAGTCACTGGATTCTCCAACACAGACAGATGGGAGGACTTCACTGCCATGGCTTCACTaGAAAACTTGTTATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEEEQSLDSPTQTDGRTSLPWLH*KTCYFL Trigger: CAGGAAATAACAAGTTTTCCAGTGAAGCCATGGCAG...TGAAGTCCTCCCATCTGTCTGTGTTGGAGAATCCAGTGACTGTTCTTCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR TCA 90 bp | AACTTTCTGATACAGACAAGATTCTTCCTGAGTAGGGAGAGTGTGGGAAGCAACTGTCAGCGTCACCGATaGTCTTGTCCTTGGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: NFLIQTRFFLSRESVGSNCQRHR*SCPWIY Trigger: ATATATCCAAGGACAAGATCATCGGTGACGCTGACA...GTTGCTTCCCACACTCTCCCTACTCAGGAAGAATCTTGTCTGTATCAGAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR GCA 90 bp | TGGTTTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAACAAGACAGCTTCTTCTaGAGATTCGTGTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WFALISVLQWPGSICHKKQDSFF*RFVWLP Trigger: AGGCAGCCACACGAATCTGCAGAAGAAGCTGTCTTG...TTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTTTATTGTAAAGTCATGCATTTCTATCGGAGGCAAACACAATGCCACACCCAATGGCTTTATTTaGCACCACAAAGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVFIVKSCISIGGKHNATPNGFI*HHKGPQ Trigger: CTGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGG...TGTGGCATTGTGTTTGCCTCCGATAGAAATGCATGACTTTACAATAAAGACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| 3UTR CAA 72 bp | GTCTTTGGAGGATTTTGGTCAGAATTCCATCATTTCTaGAAAATAAACCTGTTGGTCACAGGTGCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFGGFWSEFHHF*KINLLVTGAQC Trigger: GCACTGAGCACCTGTGACCAACAGGTTTATTTTCAAGAAATGATGGAATTCTGACCAAAATCCTCCAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035094.14 ENSMUST00000164213.5 ENSMUST00000214140.2 ENSMUST00000214462.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTTGCTCTTATTTCTGTCTTACAATGGCCAGGTAGCATCTGCCATAAGAAACAGAAGGATCCGGCTTaGATTTACAATGCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WFALISVLQWPGSICHKKQKDPA*IYNAFC Trigger: ACAGAAAGCATTGTAAATTCAAGCCGGATCCTTCTG...TTTCTTATGGCAGATGCTACCTGGCCATTGTAAGACAGAAATAAGAGCAAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS GCA 90 bp | TTTGAAGGCCAATTCTGTACCAGGCACTGTGCTGCACCGTGTGGCTaGCTCGCCAGCTTCGCGGATTCCGCGTCCGGACGCCGGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FEGQFCTRHCAAPCG*LASFADSASGRRKN Trigger: GTTTTTCCGGCGTCCGGACGCGGAATCCGCGAAGCTGGCGAGGCAGCCACACGGTGCAGCACAGTGCCTGGTACAGAATTGGCCTTCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164213.5 |
||
| CDS CCA 90 bp | AGGAAACCCAAACTGTTCCAAGACAGCTTCTTCTGCAGATTCGTGTaGCTGCCTCGCCAGCTTCGCGGATTCCGCGTCCGGACGCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RKPKLFQDSFFCRFV*LPRQLRGFRVRTPE Trigger: TTCCGGCGTCCGGACGCGGAATCCGCGAAGCTGGCGAGGCAGCCACACGAATCTGCAGAAGAAGCTGTCTTGGAACAGTTTGGGTTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
||
| CDS GCA 90 bp | AACCCAAACTGTTCCAAGACAGCTTCTTCTGCAGATTCGTGTGGCTaGCTCGCCAGCTTCGCGGATTCCGCGTCCGGACGCCGGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NPNCSKTASSADSCG*LASFADSASGRRKN Trigger: GTTTTTCCGGCGTCCGGACGCGGAATCCGCGAAGCTGGCGAGGCAGCCACACGAATCTGCAGAAGAAGCTGTCTTGGAACAGTTTGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
||
| CDS-3UTR CAA 90 bp | TTCCGGGCTTCTGCGAGCCAGGATCACCTTGTAAAGGTGCGAGGGGACGGCCACTGGCTTCCGATGATCTaGTCCTTGGATATATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FRASASQDHLVKVRGDGHWLPMI*SLDICS Trigger: TGAGCATATATCCAAGGACAAGATCATCGGAAGCCA...GTGGCCGTCCCCTCGCACCTTTACAAGGTGATCCTGGCTCGCAGAAGCCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214140.2 |
||
| CDS-3UTR CAA 90 bp | CGTATTGCTTGGAGGACAGTGGCAGAGTGGCAGATTCAGACGAGTCCTTTTGCCACCCAATGGCTTTATTaGGCACCACAAAGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RIAWRTVAEWQIQTSPFATQWLY*APQRPP Trigger: TGGGGGCCTTTGTGGTGCCAAATAAAGCCATTGGGT...GGCAAAAGGACTCGTCTGAATCTGCCACTCTGCCACTGTCCTCCAAGCAATACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR CAA 90 bp | GTCCAGCAGACAGCAGGACCAGAGGTACCCGGCGACTCTTGGCAAACACCTTTCACAGAAGGATCCGGCTaGAATTTACAATGCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQQTAGPEVPGDSWQTPFTEGSG*NLQCFL Trigger: CAGAAAGCATTGTAAATTCAAGCCGGATCCTTCTGT...GAAAGGTGTTTGCCAAGAGTCGCCGGGTACCTCTGGTCCTGCTGTCTGCTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS-3UTR CAA 90 bp | ATCACTAGAAATGATGAAAGATTAAGAATTAAATCTCCCTCCCCGAGACAGGGAGCTTCACTGGAAAACTaGTTATTTCCTGCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ITRNDERLRIKSPSPRQGASLEN*LFPAGA Trigger: GGCCCCGGCAGGAAATAACAAGTTTTCCAGTGAAGC...TCCCTGTCTCGGGGAGGGAGATTTAATTCTTAATCTTTCATCATTTCTAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035094.14 |
||
| CDS GCA 72 bp | CAATTCTGTACCAGGCACTGTGCTGCACCGTGTGGCTaGCTCGCCAGCTTCGCGGATTCCGCGTCCGGACGC | + |
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Preference number: 6 (lower is better) Translates to: QFCTRHCAAPCG*LASFADSASGR Trigger: GCGTCCGGACGCGGAATCCGCGAAGCTGGCGAGGCAGCCACACGGTGCAGCACAGTGCCTGGTACAGAATTG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164213.5 |
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| CDS CCA 72 bp | AGGCCAATTCTGTACCAGGCACTGTGCTGCACCGTGTaGCTGCCTCGCCAGCTTCGCGGATTCCGCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: RPILYQALCCTV*LPRQLRGFRVR Trigger: CCGGACGCGGAATCCGCGAAGCTGGCGAGGCAGCCACACGGTGCAGCACAGTGCCTGGTACAGAATTGGCCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164213.5 |
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| CDS GCA 72 bp | TGTTCCAAGACAGCTTCTTCTGCAGATTCGTGTGGCTaGCTCGCCAGCTTCGCGGATTCCGCGTCCGGACGC | + |
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Preference number: 6 (lower is better) Translates to: CSKTASSADSCG*LASFADSASGR Trigger: GCGTCCGGACGCGGAATCCGCGAAGCTGGCGAGGCAGCCACACGAATCTGCAGAAGAAGCTGTCTTGGAACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
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| CDS CCA 72 bp | AAACTGTTCCAAGACAGCTTCTTCTGCAGATTCGTGTaGCTGCCTCGCCAGCTTCGCGGATTCCGCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: KLFQDSFFCRFV*LPRQLRGFRVR Trigger: CCGGACGCGGAATCCGCGAAGCTGGCGAGGCAGCCACACGAATCTGCAGAAGAAGCTGTCTTGGAACAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035094.14 ENSMUST00000214140.2 |
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| CDS CAA 72 bp | AACCCAAACTGTTCCAAGACAGCTTCTTCTGCAGATTaGAAGGCCAATTCTGTACCAGGCACTGTGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: NPNCSKTASSAD*KANSVPGTVLH Trigger: GTGCAGCACAGTGCCTGGTACAGAATTGGCCTTCAAATCTGCAGAAGAAGCTGTCTTGGAACAGTTTGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164213.5 |
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| CDS CAA 72 bp | AAAAGGTTTCTGCCATGGCTTCCGATGATCTTGTCCTaGGATATATGCTCAAGAACCCATCTGGGCACCCGT | + |
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Preference number: 6 (lower is better) Translates to: KRFLPWLPMILS*DICSRTHLGTR Trigger: ACGGGTGCCCAGATGGGTTCTTGAGCATATATCCAAGGACAAGATCATCGGAAGCCATGGCAGAAACCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214140.2 |
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