Pregenerated sensors for EXOC6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033769Ensembl transcript IDs: ENSMUST00000160197.6, ENSMUST00000162821.8
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCACACTGTGGACCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTaGTTTGTCAGAGAACAGCACAGCAGACGCAGAGCTGGGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: PSHCGPRFPGSEAAS*FVREQHSRRRAGQR Trigger: CCTTTGCCCAGCTCTGCGTCTGCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGGTCCACAGTGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR TCA 90 bp | CGCAGAGCTGGGCAAAGGCAAGCGGCCATCCTCACACTCTGTGACTaGATGAGAGTCCCCGTCAGCAGGACTCTGGTGAGGAAGGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: RRAGQRQAAILTLCD*MRVPVSRTLVRKVE Trigger: CTCTACCTTCCTCACCAGAGTCCTGCTGACGGGGACTCTCATTCAGTCACAGAGTGTGAGGATGGCCGCTTGCCTTTGCCCAGCTCTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | AGCAGGACTCTGGTGAGGAAGGTAGAGTGGCCCTGGTCCTACACATaGTTTTCATTCCATCCATGTCAGTTCCTTTGGGACAGAGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SRTLVRKVEWPWSYT*FSFHPCQFLWDRGG Trigger: GCCACCTCTGTCCCAAAGGAACTGACATGGATGGAATGAAAACCATGTGTAGGACCAGGGCCACTCTACCTTCCTCACCAGAGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | AGAGTCCCCGTCAGCAGGACTCTGGTGAGGAAGGTAGAGTGGCCCTaGTCCTACACATGGTTTTCATTCCATCCATGTCAGTTCCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: RVPVSRTLVRKVEWP*SYTWFSFHPCQFLW Trigger: CCAAAGGAACTGACATGGATGGAATGAAAACCATGTGTAGGACCAGGGCCACTCTACCTTCCTCACCAGAGTCCTGCTGACGGGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR TCA 90 bp | TGTTGTGACAGCCCACTCTCTACACTGAAGGCTGACAAGCCCTGGTaGAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: CCDSPLSTLKADKPW*RKGLSFLLSQSGLW Trigger: CCACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTGTCAGCCTTCAGTGTAGAGAGTGGGCTGTCACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR TCA 90 bp | AAGTGTCCCCAAAGGACAAATGTTGTGACAGCCCACTCTCTACACTaGAGGCTGACAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: KCPQRTNVVTAHSLH*RLTSPGEERAFPSF Trigger: GAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTGTCAGCCTTCAGTGTAGAGAGTGGGCTGTCACAACATTTGTCCTTTGGGGACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | TTCTGCAGCAGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTaGAGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGA | + |
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Preference number: 1 (lower is better) Translates to: FCSSLQQSMRGEGSF*RFRWISLLFSHKCG Trigger: TCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCTGCTGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | GGTTTGGATCAGAACAGTAGGACGAGTGGGTACGCAATGCTGCGATaGTCTTTGAAAGGGCCATTTCCCACAGTTCATCAATGTAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GLDQNSRTSGYAMLR*SLKGPFPTVHQCRL Trigger: GAGCCTACATTGATGAACTGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTACTGTTCTGATCCAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR GCA 90 bp | AATGGGTATGTAGGCTCTCGTTTAATAGCAGTTAAAAGAGGAAGGTaGACAGGGGAGTGGGTTACTCATGCTCTTTCCACAGAGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: NGYVGSRLIAVKRGR*TGEWVTHALSTEEP Trigger: GGGCTCCTCTGTGGAAAGAGCATGAGTAACCCACTCCCCTGTGCACCTTCCTCTTTTAACTGCTATTAAACGAGAGCCTACATACCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | GTCTCTCTGCTCCTCACTGGAGCTGGAAACACTTTTGTGGCATCTTaGTCAGTGTTCCACAATGCAATTAAACTCTCAGCAGCAGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VSLLLTGAGNTFVAS*SVFHNAIKLSAAVR Trigger: CCTGACTGCTGCTGAGAGTTTAATTGCATTGTGGAACACTGACCAAGATGCCACAAAAGTGTTTCCAGCTCCAGTGAGGAGCAGAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | CGAGAGATCTCCTTGTCTTCTCTTCCACAGGCCTGGGCTCTCTGCTaGCTAGTAAGTTTTGTGTATTCTTCTGTGACTCTTCCTGAACCT | + |
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Preference number: 1 (lower is better) Translates to: REISLSSLPQAWALC*LVSFVYSSVTLPEP Trigger: AGGTTCAGGAAGAGTCACAGAAGAATACACAAAACTTACTAGCCAGCAGAGAGCCCAGGCCTGTGGAAGAGAAGACAAGGAGATCTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR TCA 90 bp | CCTATGGTGGTTGTGCCCAAGGGTGTAGAGCTTGGGACGTTTTCTTaGAAGATGGTAGCTGTAAGGCTGTCATCAAGACAGGAATATGCA | + |
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Preference number: 1 (lower is better) Translates to: PMVVVPKGVELGTFS*KMVAVRLSSRQEYA Trigger: TGCATATTCCTGTCTTGATGACAGCCTTACAGCTACCATCTTTCAAGAAAACGTCCCAAGCTCTACACCCTTGGGCACAACCACCATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR TCA 90 bp | ATCAGAACAGTAGGACGAGTGGGTACGCAATGCTGCGATGGTCTTTaGAAGGGCCATTTCCCACAGTTCATCAATGTAGGCTCTATTCAC | + |
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Preference number: 1 (lower is better) Translates to: IRTVGRVGTQCCDGL*KGHFPQFINVGSIH Trigger: GTGAATAGAGCCTACATTGATGAACTGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTACTGTTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR GCA 90 bp | TTCTTGAAAGATGGTAGCTGTAAGGCTGTCATCAAGACAGGAATATaGAATCTCACACATCATGAGGCTCTACCCATGGTGAGGGCACCC | + |
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Preference number: 1 (lower is better) Translates to: FLKDGSCKAVIKTGI*NLTHHEALPMVRAP Trigger: GGGTGCCCTCACCATGGGTAGAGCCTCATGATGTGTGAGATTGCATATTCCTGTCTTGATGACAGCCTTACAGCTACCATCTTTCAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR GCA 90 bp | CTTCGAGAGATCTCCTTGTCTTCTCTTCCACAGGCCTGGGCTCTCTaGTGGCTAGTAAGTTTTGTGTATTCTTCTGTGACTCTTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LREISLSSLPQAWAL*WLVSFVYSSVTLPE Trigger: TTCAGGAAGAGTCACAGAAGAATACACAAAACTTACTAGCCAGCAGAGAGCCCAGGCCTGTGGAAGAGAAGACAAGGAGATCTCTCGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR GCA 90 bp | AGCTTATCGACAGTGGCAGAAATATTTCTCTGTTGTAGTCGACACTaGTTCAGCTCCTCCATTGCTATTACCAGTTCCTTGCCCTCGTGC | + |
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Preference number: 1 (lower is better) Translates to: SLSTVAEIFLCCSRH*FSSSIAITSSLPSC Trigger: GCACGAGGGCAAGGAACTGGTAATAGCAATGGAGGAGCTGAAGCAGTGTCGACTACAACAGAGAAATATTTCTGCCACTGTCGATAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR CCA 90 bp | CTTGACCAGTCTCTCTGCTCCTCACTGGAGCTGGAAACACTTTTGTaGCATCTTGGTCAGTGTTCCACAATGCAATTAAACTCTCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LDQSLCSSLELETLL*HLGQCSTMQLNSQQ Trigger: CTGCTGAGAGTTTAATTGCATTGTGGAACACTGACCAAGATGCCACAAAAGTGTTTCCAGCTCCAGTGAGGAGCAGAGAGACTGGTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | CACATGGTTTTCATTCCATCCATGTCAGTTCCTTTGGGACAGAGGTaGCAACTAGACAGGCAGCAAGATGGAGTGATTAAAAGTGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: HMVFIPSMSVPLGQR*QLDRQQDGVIKSVP Trigger: GGGGACACTTTTAATCACTCCATCTTGCTGCCTGTCTAGTTGCCACCTCTGTCCCAAAGGAACTGACATGGATGGAATGAAAACCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR TCA 90 bp | TGGGACCAGAGTGAAACTGTCATCTTGCCACATGCCACACTCTCATaGGCCAATAATTCAACCAGCAAGGCAGATAGATATCCTAAACTG | + |
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Preference number: 1 (lower is better) Translates to: WDQSETVILPHATLS*ANNSTSKADRYPKL Trigger: CAGTTTAGGATATCTATCTGCCTTGCTGGTTGAATTATTGGCTCATGAGAGTGTGGCATGTGGCAAGATGACAGTTTCACTCTGGTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR TCA 90 bp | TCTCTGCTGGCTAGTAAGTTTTGTGTATTCTTCTGTGACTCTTCCTaGACCTCTGGGCCATTATGTAGCCTGATGATGAGACTTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SLLASKFCVFFCDSS*TSGPLCSLMMRLEG Trigger: GCCTTCAAGTCTCATCATCAGGCTACATAATGGCCCAGAGGTTCAGGAAGAGTCACAGAAGAATACACAAAACTTACTAGCCAGCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR GCA 90 bp | ACTAATGAAACTGCAAGCTATGGGACCAGAGTGAAACTGTCATCTTaGCACATGCCACACTCTCATGAGCCAATAATTCAACCAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: TNETASYGTRVKLSS*HMPHSHEPIIQPAR Trigger: CCTTGCTGGTTGAATTATTGGCTCATGAGAGTGTGGCATGTGGCAAGATGACAGTTTCACTCTGGTCCCATAGCTTGCAGTTTCATTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | GTAATAAGTGATTGCTTGACCAGTCTCTCTGCTCCTCACTGGAGCTaGAAACACTTTTGTGGCATCTTGGTCAGTGTTCCACAATGCAAT | + |
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Preference number: 1 (lower is better) Translates to: VISDCLTSLSAPHWS*KHFCGILVSVPQCN Trigger: ATTGCATTGTGGAACACTGACCAAGATGCCACAAAAGTGTTTCCAGCTCCAGTGAGGAGCAGAGAGACTGGTCAAGCAATCACTTATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CCA 90 bp | TTCCTCGTCTTCCACATCCAGAATTCCCGAATCCTGTTCCGACTTTaGACTTGTGCTCTCCACCTCTGCATCAAAGATTGTATAAACATC | + |
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Preference number: 1 (lower is better) Translates to: FLVFHIQNSRILFRL*TCALHLCIKDCINI Trigger: GATGTTTATACAATCTTTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGGATTCGGGAATTCTGGATGTGGAAGACGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR GCA 90 bp | TCAGTGCAGGATAATGCCTTTTGGTTTTCATCTGGTCCCTCAGTTTaGTGTACATCTCTAGGACTGGAAGACACAGCATTAGCTTATCGA | + |
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Preference number: 1 (lower is better) Translates to: SVQDNAFWFSSGPSV*CTSLGLEDTALAYR Trigger: TCGATAAGCTAATGCTGTGTCTTCCAGTCCTAGAGATGTACAGCAAACTGAGGGACCAGATGAAAACCAAAAGGCATTATCCTGCACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR CCA 90 bp | TGTACATCTCTAGGACTGGAAGACACAGCATTAGCTTATCGACAGTaGCAGAAATATTTCTCTGTTGTAGTCGACACTGCTTCAGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: CTSLGLEDTALAYRQ*QKYFSVVVDTASAP Trigger: AGGAGCTGAAGCAGTGTCGACTACAACAGAGAAATATTTCTGCCACTGTCGATAAGCTAATGCTGTGTCTTCCAGTCCTAGAGATGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR TCA 90 bp | TTGTTACTGGTATGGGACTGTAGTTGTCAGAATCAAGTATATTTCTaGAAACCCCTGCCCACTTCTTCAATAGAGTCTCGCTGTACTGGT | + |
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Preference number: 1 (lower is better) Translates to: LLLVWDCSCQNQVYF*KPLPTSSIESRCTG Trigger: ACCAGTACAGCGAGACTCTATTGAAGAAGTGGGCAGGGGTTTTCAGAAATATACTTGATTCTGACAACTACAGTCCCATACCAGTAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCACTGGCTACAGCAAGTaGCCCTCTGTGGGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PRFPGSEAASCFVREQHSTGYSK*PSVGPR Trigger: CCTTGGGCCCACAGAGGGCCACTTGCTGTAGCCAGT...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CAA 90 bp | CACACTGTGGACCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTaGTCAGAGAACAGCACAGCAGACGCAGAGCTGGGCAAAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: HTVDPAFPAQRQQAA*SENSTADAELGKGK Trigger: CTTGCCTTTGCCCAGCTCTGCGTCTGCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGGTCCACAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCCTCACACTCTGTGACTaGATGAGAGTCCCCGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PRFPGSEAASCFVREQHSLTLCD*MRVPVS Trigger: GCTGACGGGGACTCTCATTCAGTCACAGAGTGTGAG...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCCCTTTGGGACAGAGGTaGCAACTAGACAGGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PRFPGSEAASCFVREQHSPLGQR*QLDRQQ Trigger: TTGCTGCCTGTCTAGTTGCCACCTCTGTCCCAAAGG...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCAAGGTAGAGTGGCCCTaGTCCTACACATGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PRFPGSEAASCFVREQHSKVEWP*SYTWFS Trigger: TGAAAACCATGTGTAGGACCAGGGCCACTCTACCTT...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGACGGACTGTCAGGCCTGATGCATGATAGAGTCACTGGGAGATACTGCTTTTCACTGGTCACAGACTaGGGGCTTCGAGAGATCTCC | + |
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Preference number: 2 (lower is better) Translates to: LDGLSGLMHDRVTGRYCFSLVTD*GLREIS Trigger: GGAGATCTCTCGAAGCCCTCAGTCTGTGACCAGTGA...AAAGCAGTATCTCCCAGTGACTCTATCATGCATCAGGCCTGACAGTCCGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCGAGATCCTGGACCACTaGCTACAGCAAGTGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VDDSWARGNNPLATVDPVEILDH*LQQVAL Trigger: GAGGGCCACTTGCTGTAGCCAGTGGTCCAGGATCTC...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATGCTATGGGACCAGAGTaGAACTGTCATCTTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: VSQCKVPLANFTGTPSQDAMGPE*NCHLAT Trigger: TGTGGCAAGATGACAGTTTCACTCTGGTCCCATAGC...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR GCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCGTGGTGTACTTTTCTTaGTGGTGTTTGAGATTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PRFPGSEAASCFVREQHSVVYFS*WCLRLL Trigger: TAGCAATCTCAAACACCAGCAAGAAAAGTACACCAC...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR CAA 90 bp | CTTCTGCAGCAGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTaGGAGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLQQPAAEHERRRFL*EVQMDLTAFLPQMW Trigger: CCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCTGCTGCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCAAGAAGAGACAGAGATaGATGGCATGGGGACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLQQSMRGEGSFWRFRWIKKRQR*MAWGLE Trigger: CTCCAGTCCCCATGCCATTCATCTCTGTCTCTTCTT...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCCAATCTCACACATCATaGGGCTCTACCCATGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLQQSMRGEGSFWRFRWIQSHTS*GSTHGE Trigger: CTCACCATGGGTAGAGCCTCATGATGTGTGAGATTG...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCCTCTACACTGAAGGCTaGCAAGCCCTGGTGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLQQSMRGEGSFWRFRWILYTEG*QALVKK Trigger: TTTCTTCACCAGGGCTTGTCAGCCTTCAGTGTAGAG...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTTCGTGGAGCACTGGATaGGGCTCACCATGTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RDEWHGDWSPDPTWLFKISWSTG*GSPCWH Trigger: GTGCCAACATGGTGAGCCGCATCCAGTGCTCCACGA...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGCTTTGTCAGAGAACAGCACAGCAGACGCAGAGCTGGGCAAAGGCAAGCAGCTGTACCTCTGTGTaGTGTACTTTTCTTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KLLCQRTAQQTQSWAKASSCTSV*CTFLAG Trigger: ACCAGCAAGAAAAGTACACCACACAGAGGTACAGCT...GCTTGCCTTTGCCCAGCTCTGCGTCTGCTGTGCTGTTCTCTGACAAAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGACGAGTGGGTACGCAATGCTGCGATGGTCTTTGAAAGGGCCATTTCCCATATTAGACGGAGGCTaGAGTACCAAACGAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRTSGYAMLRWSLKGPFPILDGG*STKRAC Trigger: ACAGGCTCGTTTGGTACTCCAGCCTCCGTCTAATAT...GGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
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| 3UTR CAA 90 bp | GCCCTGGTCCTACACATGGTTTTCATTCCATCCATGTCAGTTCCTTaGGGACAGAGGTGGCAACTAGACAGGCAGCAAGATGGAGTGATT | + |
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Preference number: 2 (lower is better) Translates to: ALVLHMVFIPSMSVP*GQRWQLDRQQDGVI Trigger: AATCACTCCATCTTGCTGCCTGTCTAGTTGCCACCTCTGTCCCAAAGGAACTGACATGGATGGAATGAAAACCATGTGTAGGACCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGACGGACTGTCAGGCCTGATGCATGATAGAGTCACTGGGAGATACTGCTTTGGCAGCAAGATGGAGTaGTTAAAAGTGTCCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LDGLSGLMHDRVTGRYCFGSKME*LKVSPK Trigger: CTTTGGGGACACTTTTAATCACTCCATCTTGCTGCC...AAAGCAGTATCTCCCAGTGACTCTATCATGCATCAGGCCTGACAGTCCGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR GCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCCTCTTTGAGGAAGAATaGACAAATGCAGGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: VDDSWARGNNPLATVDPVLFEEE*TNAGPA Trigger: GGCTGGCCCTGCATTTGTGCATTCTTCCTCAAAGAG...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR GCA 90 bp | CATGGTGAGGGCACCCAGGCTACTTTCAGACTTCAGGGAATCTGGGCATTTAGACTAAGCCCTGGTTCTTaGTTACTCTTGTGCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HGEGTQATFRLQGIWAFRLSPGS*LLLCLS Trigger: AGAGAGGCACAAGAGTAAGCAAGAACCAGGGCTTAG...TCTAAATGCCCAGATTCCCTGAAGTCTGAAAGTAGCCTGGGTGCCCTCACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGACGAGTGGGTACGCAATGCTGCGATGGTCTTTGAAAGGGCCATTTCCCCTCCAGTGTCTTCAGTaGAGGATAATGCCTTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SRTSGYAMLRWSLKGPFPLQCLQ*RIMPFG Trigger: ACCAAAAGGCATTATCCTGCACTGAAGACACTGGAG...GGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATAGACTTCAGGGAATCTaGGCATTTAGAGATGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VSQCKVPLANFTGTPSQDRLQGI*AFRDAA Trigger: AGCAGCATCTCTAAATGCCCAGATTCCCTGAAGTCT...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAATTCCCGAATCCTGTTCCGACTTTGGACTTGTGCTCTCCACCTCTGCATAGGTTTCTTTGCTGTTaGGCTTGCTTCATGGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: PEFPNPVPTLDLCSPPLHRFLCC*ACFMAV Trigger: GACTGCCATGAAGCAAGCCCAACAGCAAAGAAACCT...ATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGGATTCGGGAATTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGCTTGGGACGTTTTCTTaGAAGATGGTAGCTGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QALVKKGPFLPSQSVRFVLGTFS*KMVAVR Trigger: CCTTACAGCTACCATCTTTCAAGAAAACGTCCCAAG...CACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGCAGCAGTCAGGCTAACAGCTTCTACAAGTGTCTCAGTGCAAAGTCCCTCGTGAAACTGTCATCTTaGCACATGCCACACTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LSSSQANSFYKCLSAKSLVKLSS*HMPHSH Trigger: ATGAGAGTGTGGCATGTGGCAAGATGACAGTTTCAC...GAGGGACTTTGCACTGAGACACTTGTAGAAGCTGTTAGCCTGACTGCTGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTACCTCTTCATCATCTTCCTCGTCTTCCACATCCAGAATTCCCGAATCCTCCGACTTTGGACTTGTaGTCTCCACCTCTGCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: QVPLHHLPRLPHPEFPNPPTLDL*SPPLHQ Trigger: TTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGG...AGGATTCGGGAATTCTGGATGTGGAAGACGAGGAAGATGATGAAGAGGTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGCAGCAGTCAGGCTAACAGCTTCTACAAGTGTCTCAGTGCAAAGTCCCTCACTTCCTCTAAGCCCTaGTTCTTGCTTACTCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSSSQANSFYKCLSAKSLTSSKP*FLLTLV Trigger: CACAAGAGTAAGCAAGAACCAGGGCTTAGAGGAAGT...GAGGGACTTTGCACTGAGACACTTGTAGAAGCTGTTAGCCTGACTGCTGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CCA 90 bp | GGTACCTCTTCATCATCTTCCTCGTCTTCCACATCCAGAATTCCCGAATCCTGTTTTCCTCCCGAAGCTTaGGGATGTTGTCCACCATCA | + |
|
Preference number: 2 (lower is better) Translates to: GTSSSSSSSSTSRIPESCFPPEA*GCCPPS Trigger: TGATGGTGGACAACATCCCCAAGCTTCGGGAGGAAA...ACAGGATTCGGGAATTCTGGATGTGGAAGACGAGGAAGATGATGAAGAGGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR CAA 90 bp | TCCTATGGTGGTTGTGCCCAAGGGTGTAGAGCTTGGGACGTTTTCTaGAAAGATGGTAGCTGTAAGGCTGTCATCAAGACAGGAATATGC | + |
|
Preference number: 2 (lower is better) Translates to: SYGGCAQGCRAWDVF*KDGSCKAVIKTGIC Trigger: GCATATTCCTGTCTTGATGACAGCCTTACAGCTACCATCTTTCAAGAAAACGTCCCAAGCTCTACACCCTTGGGCACAACCACCATAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 90 bp | GATCAGAACAGTAGGACGAGTGGGTACGCAATGCTGCGATGGTCTTaGAAAGGGCCATTTCCCACAGTTCATCAATGTAGGCTCTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: DQNSRTSGYAMLRWS*KGPFPTVHQCRLYS Trigger: TGAATAGAGCCTACATTGATGAACTGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTACTGTTCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATCAAGCCTTGTCTCTGTaGTGTTATTTTGTTGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: VSQCKVPLANFTGTPSQDQALSL*CYFVDD Trigger: GTCATCAACAAAATAACATCACAGAGACAAGGCTTG...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGCAGCAGTCAGGCTAACAGCTTCTACAAGTGTCTCAGTGCAAAGTCCCTCCAGAAAACAGAGATGTaGCTTCGAGAAAGCACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSSSQANSFYKCLSAKSLQKTEM*LRESTL Trigger: AAGAGTGCTTTCTCGAAGTCACATCTCTGTTTTCTG...GAGGGACTTTGCACTGAGACACTTGTAGAAGCTGTTAGCCTGACTGCTGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTACCTCTTCATCATCTTCCTCGTCTTCCACATCCAGAATTCCCGAATCCTTGTTGTAGTCGACACTaGTTCAGCTCCTCCATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QVPLHHLPRLPHPEFPNPCCSRH*FSSSIA Trigger: AGCAATGGAGGAGCTGAAGCAGTGTCGACTACAACA...AGGATTCGGGAATTCTGGATGTGGAAGACGAGGAAGATGATGAAGAGGTACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGACGGACTGTCAGGCCTGATGCATGATAGAGTCACTGGGAGATACTGCTTTCAAGGGTGTAGAGCTTaGGACGTTTTCTTGAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LDGLSGLMHDRVTGRYCFQGCRA*DVFLKD Trigger: ATCTTTCAAGAAAACGTCCCAAGCTCTACACCCTTG...AAAGCAGTATCTCCCAGTGACTCTATCATGCATCAGGCCTGACAGTCCGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR TCA 90 bp | CTGGACGGACTGTCAGGCCTGATGCATGATAGAGTCACTGGGAGATACTGCTTTTACATATGCTCTCTTTaGGGAAGAATGCACAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: LDGLSGLMHDRVTGRYCFYICSL*GRMHKC Trigger: GCATTTGTGCATTCTTCCTCAAAGAGAGCATATGTA...AAAGCAGTATCTCCCAGTGACTCTATCATGCATCAGGCCTGACAGTCCGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR GCA 90 bp | TGCTCTTCTCCACCCATACCAGTGTTACCTGGTACTGAGAGTTTTGTTTTGTTTCTTGACCAGTCTCTCTaGTCCTCACTGGAGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CSSPPIPVLPGTESFVLFLDQSL*SSLELE Trigger: TTCCAGCTCCAGTGAGGAGCAGAGAGACTGGTCAAG...AAACAAAACAAAACTCTCAGTACCAGGTAACACTGGTATGGGTGGAGAAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR GCA 90 bp | CCTGTTCCGACTTTGGACTTGTGCTCTCCACCTCTGCATCAAAGATTGTATAAATCCTTGCCCTCGTGCTaGAGTTTCCTATTAGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PVPTLDLCSPPLHQRLYKSLPSC*SFLLVS Trigger: GGACACTAATAGGAAACTGCAGCACGAGGGCAAGGA...TTTATACAATCTTTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR CAA 90 bp | CTTCCTCGTCTTCCACATCCAGAATTCCCGAATCCTGTTCCGACTTaGGACTTGTGCTCTCCACCTCTGCATCAAAGATTGTATAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: LPRLPHPEFPNPVPT*DLCSPPLHQRLYKH Trigger: ATGTTTATACAATCTTTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGGATTCGGGAATTCTGGATGTGGAAGACGAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTAATTCTCAAATGTTTCACGGGCACCCAGGACAGAATATATGTGTAGACACCCTTTGCTGTTGGGCTTaGTTCATGGCAGTCTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SNSQMFHGHPGQNICVDTLCCWA*FMAVSP Trigger: TGGAGAGACTGCCATGAAGCAAGCCCAACAGCAAAG...GGTGTCTACACATATATTCTGTCCTGGGTGCCCGTGAAACATTTGAGAATTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGTTCCGACTTTGGACTTGTGCTCTCCACCTCTGCATCAAAGATTGTATAAACCAATTTTGTCTGAATaGTTGCGGATGCTCTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PVPTLDLCSPPLHQRLYKPILSE*LRMLSR Trigger: TCTGGAGAGCATCCGCAAGCATTCAGACAAAATTGG...TTTATACAATCTTTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCAGTCCTGACCCAACTTaGCTTTTTAAGATTCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VDDSWARGNNPLATVDPVSPDPT*LFKIQK Trigger: TTTCTGAATCTTAAAAAGCCAAGTTGGGTCAGGACT...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CCA 90 bp | AATATATGTGTAGACACCGATACACAGGAGAGAAATCCACCAAGTCTTGAGCCCGTTGGGCTTGCTTCATaGCAGTCTCTCCAATTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: NICVDTDTQERNPPSLEPVGLAS*QSLQFC Trigger: ACAAAATTGGAGAGACTGCCATGAAGCAAGCCCAAC...GGGCTCAAGACTTGGTGGATTTCTCTCCTGTGTATCGGTGTCTACACATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR CAA 90 bp | AATTCAACCAGCAAGGCAGATAGATATCCTAAACTGAGGCTGGCTTaGGCATACTACATAGTCATGTCTGCCAGGCTCTACTTATGTACT | + |
|
Preference number: 2 (lower is better) Translates to: NSTSKADRYPKLRLA*AYYIVMSARLYLCT Trigger: AGTACATAAGTAGAGCCTGGCAGACATGACTATGTAGTATGCCAAAGCCAGCCTCAGTTTAGGATATCTATCTGCCTTGCTGGTTGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 90 bp | CTTTCAGACTTCAGGGAATCTGGGCATTTAGAGATGCTGCTGGAATaGAGTGTGAGACTCTCAGGGACCTTAAGAATTGCTGATTTATGT | + |
|
Preference number: 2 (lower is better) Translates to: LSDFRESGHLEMLLE*SVRLSGTLRIADLC Trigger: ACATAAATCAGCAATTCTTAAGGTCCCTGAGAGTCTCACACTCAATTCCAGCAGCATCTCTAAATGCCCAGATTCCCTGAAGTCTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CCA 90 bp | GGGACTGTAGTTGTCAGAATCAAGTATATTTCTGAAAACCCCTGCCCACTTCTTCAGGATAATGCCTTTTaGTTTTCATCTGGTCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GTVVVRIKYISENPCPLLQDNAF*FSSGPS Trigger: TGAGGGACCAGATGAAAACCAAAAGGCATTATCCTG...AAGAAGTGGGCAGGGGTTTTCAGAAATATACTTGATTCTGACAACTACAGTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTATTCTAGGCTGTTGCAAGACAATGTTATCCAGGTTTCTTTGCTGTTGGGCTTTAGCTTATCGACAGTaGCAGAAATATTTCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PILGCCKTMLSRFLCCWALAYRQ*QKYFSV Trigger: AACAGAGAAATATTTCTGCCACTGTCGATAAGCTAA...AGCCCAACAGCAAAGAAACCTGGATAACATTGTCTTGCAACAGCCTAGAATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR GCA 72 bp | GCCTGCACTCAGAGGTCTAAGGAGAAAACTGGCCACTaGCACCCTTGGGCTTGGGACCTGCTGAGCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ACTQRSKEKTGH*HPWAWDLLSWV Trigger: CACCCAGCTCAGCAGGTCCCAAGCCCAAGGGTGGCAGTGGCCAGTTTTCTCCTTAGACCTCTGAGTGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR TCA 72 bp | GGGCAAAGGCAAGCGGCCATCCTCACACTCTGTGACTaGATGAGAGTCCCCGTCAGCAGGACTCTGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GQRQAAILTLCD*MRVPVSRTLVR Trigger: CCTCACCAGAGTCCTGCTGACGGGGACTCTCATTCAGTCACAGAGTGTGAGGATGGCCGCTTGCCTTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | AGTCCCACCTCATCAATTCATAGCCCCCTCACACTGTaGACCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPTSSIHSPLTL*TPLSRLRGSKL Trigger: CAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGGTCCACAGTGTGAGGGGGCTATGAATTGATGAGGTGGGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCTGGCCACTGCCACCCTaGGGCTTGGGACCTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLQQSMRGEGSFWRFRWIWPLPP*GLGPAE Trigger: CTCAGCAGGTCCCAAGCCCAAGGGTGGCAGTGGCCA...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCTCTAAGCCCTGGTTCTaGCTTACTCTTGTGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PRFPGSEAASCFVREQHSSKPWF*LTLVPL Trigger: GAGAGGCACAAGAGTAAGCAAGAACCAGGGCTTAGA...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | GTCCCCGTCAGCAGGACTCTGGTGAGGAAGGTAGAGTaGCCCTGGTCCTACACATGGTTTTCATTCCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: VPVSRTLVRKVE*PWSYTWFSFHP Trigger: TGGATGGAATGAAAACCATGTGTAGGACCAGGGCCACTCTACCTTCCTCACCAGAGTCCTGCTGACGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATGAGATGCTGCTGGAATaGAGTGTGAGACTCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSQCKVPLANFTGTPSQDEMLLE*SVRLSG Trigger: CCCTGAGAGTCTCACACTCAATTCCAGCAGCATCTC...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATATGGGAGCCTTGGGCTaGAACAAGACAAGCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VSQCKVPLANFTGTPSQDMGALG*NKTSLV Trigger: GACAAGGCTTGTCTTGTTCAAGCCCAAGGCTCCCAT...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR TCA 72 bp | AGCCCACTCTCTACACTGAAGGCTGACAAGCCCTGGTaGAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPLSTLKADKPW*RKGLSFLLSQS Trigger: TGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTGTCAGCCTTCAGTGTAGAGAGTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACGGACTGTCAGGCCTGATGCATGATAGAGTCACTGGGAGATACTGCTTTCAGAAGATGGGAGCCTaGGGCTTGAACAAGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LDGLSGLMHDRVTGRYCFQKMGA*GLNKTS Trigger: GCTTGTCTTGTTCAAGCCCAAGGCTCCCATCTTCTG...AAAGCAGTATCTCCCAGTGACTCTATCATGCATCAGGCCTGACAGTCCGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAATTCCCGAATCCTGTTCCGACTTTGGACTTGTGCTCTCCACCTCTGCATATTTCCTCCCGAAGCTaGGGGATGTTGTCCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: PEFPNPVPTLDLCSPPLHISSRS*GMLSTI Trigger: GATGGTGGACAACATCCCCAAGCTTCGGGAGGAAAT...ATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGGATTCGGGAATTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR TCA 72 bp | GTAGGACGAGTGGGTACGCAATGCTGCGATGGTCTTTaGAAGGGCCATTTCCCACAGTTCATCAATGTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VGRVGTQCCDGL*KGHFPQFINVG Trigger: GCCTACATTGATGAACTGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR CCA 72 bp | AACCAAGGCTCACAAACCATACTGTCTACAGGGCTATaGATCTGGTTAGAAGGCCACAGACTTCCAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NQGSQTILSTGL*IWLEGHRLPGS Trigger: GCTGCCTGGAAGTCTGTGGCCTTCTAACCAGATCCATAGCCCTGTAGACAGTATGGTTTGTGAGCCTTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTaGAGGTTCAGATGGATCTCACTGCTTTTCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLQQSMRGEGSF*RFRWISLLFSH Trigger: GTGGGAGAAAAGCAGTGAGATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACGGACTGTCAGGCCTGATGCATGATAGAGTCACTGGGAGATACTGCTTTAGTGAAACTGTCATCTaGCCACATGCCACACTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LDGLSGLMHDRVTGRYCFSETVI*PHATLS Trigger: TGAGAGTGTGGCATGTGGCAAGATGACAGTTTCACT...AAAGCAGTATCTCCCAGTGACTCTATCATGCATCAGGCCTGACAGTCCGTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATTGTGATGTTATTTTGTaGATGACAGCTGGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSQCKVPLANFTGTPSQDCDVIL*MTAGPE Trigger: CTCTGGCCCAGCTGTCATCAACAAAATAACATCACA...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR TCA 72 bp | TCAGGTTTGTGGAGTCACTTCTCACTGGTCACAGACTaGGGGCTTCGAGAGATCTCCTTGTCTTCTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGLWSHFSLVTD*GLREISLSSLP Trigger: TGGAAGAGAAGACAAGGAGATCTCTCGAAGCCCTCAGTCTGTGACCAGTGAGAAGTGACTCCACAAACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | CAGAACAGTAGGACGAGTGGGTACGCAATGCTGCGATaGTCTTTGAAAGGGCCATTTCCCACAGTTCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: QNSRTSGYAMLR*SLKGPFPTVHQ Trigger: TTGATGAACTGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTACTGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACCTTCGAGAGATCTCCTaGTCTTCTCTTCCACAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RFRWISLLFSHKCGTAQNLREIS*SSLPQA Trigger: GGCCTGTGGAAGAGAAGACAAGGAGATCTCTCGAAG...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | CTTCGAGAGATCTCCTTGTCTTCTCTTCCACAGGCCTaGGCTCTCTGCTGGCTAGTAAGTTTTGTGTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LREISLSSLPQA*ALCWLVSFVYS Trigger: AGAATACACAAAACTTACTAGCCAGCAGAGAGCCCAGGCCTGTGGAAGAGAAGACAAGGAGATCTCTCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACTCCATGTCAGTTCCTTaGGGACAGAGGTGGCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: RFRWISLLFSHKCGTAQNSMSVP*GQRWQL Trigger: TAGTTGCCACCTCTGTCCCAAAGGAACTGACATGGA...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACCACTTTTGTGGCATCTaGGTCAGTGTTCCACAATGC | + |
|
Preference number: 3 (lower is better) Translates to: RFRWISLLFSHKCGTAQNHFCGI*VSVPQC Trigger: GCATTGTGGAACACTGACCAAGATGCCACAAAAGTG...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR TCA 72 bp | TGTACCTCTGTGTGGTGTACTTTTCTTGCTGGTGTTTaGGATTGCTATGGCAAGGGTGAGGCGTGTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CTSVWCTFLAGV*DCYGKGEACSR Trigger: TCTTGAACACGCCTCACCCTTGCCATAGCAATCTCAAACACCAGCAAGAAAAGTACACCACACAGAGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR GCA 72 bp | GATGGTAGCTGTAAGGCTGTCATCAAGACAGGAATATaGAATCTCACACATCATGAGGCTCTACCCATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DGSCKAVIKTGI*NLTHHEALPMV Trigger: CACCATGGGTAGAGCCTCATGATGTGTGAGATTGCATATTCCTGTCTTGATGACAGCCTTACAGCTACCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | ATAAGTGATTGCTTGACCAGTCTCTCTGCTCCTCACTaGAGCTGGAAACACTTTTGTGGCATCTTGGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ISDCLTSLSAPH*SWKHFCGILVS Trigger: ACTGACCAAGATGCCACAAAAGTGTTTCCAGCTCCAGTGAGGAGCAGAGAGACTGGTCAAGCAATCACTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | ATGATAGAGTCACTGGGAGATACTGCTTTTGTTAACTaGGATTCTGGGCTCCTGTATGCAGGTCCTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: MIESLGDTAFVN*DSGLLYAGPAL Trigger: AAGAGCAGGACCTGCATACAGGAGCCCAGAATCCCAGTTAACAAAAGCAGTATCTCCCAGTGACTCTATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | TTCCACATCCAGAATTCCCGAATCCTGTTCCGACTTTaGACTTGTGCTCTCCACCTCTGCATCAAAGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: FHIQNSRILFRL*TCALHLCIKDC Trigger: ACAATCTTTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGGATTCGGGAATTCTGGATGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTACCTATTCTAGGCTGTTGCAAGACAATGTTATCCAGGTTTCTTTGCTGTCGAAGCTTGGGGATGTaGTCCACCATCACCTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LLPILGCCKTMLSRFLCCRSLGM*STITLQ Trigger: CTGTAAGGTGATGGTGGACAACATCCCCAAGCTTCG...ACAGCAAAGAAACCTGGATAACATTGTCTTGCAACAGCCTAGAATAGGTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTTCCGACTTTGGACTTGTGCTCTCCACCTCTGCATCAAAGATTGTATAAAGCAGTCTCTCCAATTTaGTCTGAATGCTTGCGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PVPTLDLCSPPLHQRLYKAVSPI*SECLRM Trigger: CATCCGCAAGCATTCAGACAAAATTGGAGAGACTGC...TTTATACAATCTTTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR TCA 72 bp | CCTAAACTAATGAAACTGCAAGCTATGGGACCAGAGTaGAACTGTCATCTTGCCACATGCCACACTCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PKLMKLQAMGPE*NCHLATCHTLM Trigger: CATGAGAGTGTGGCATGTGGCAAGATGACAGTTTCACTCTGGTCCCATAGCTTGCAGTTTCATTAGTTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR GCA 72 bp | ACTGCAAGCTATGGGACCAGAGTGAAACTGTCATCTTaGCACATGCCACACTCTCATGAGCCAATAATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TASYGTRVKLSS*HMPHSHEPIIQ Trigger: TTGAATTATTGGCTCATGAGAGTGTGGCATGTGGCAAGATGACAGTTTCACTCTGGTCCCATAGCTTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | CTCCTCACTGGAGCTGGAAACACTTTTGTGGCATCTTaGTCAGTGTTCCACAATGCAATTAAACTCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLTGAGNTFVAS*SVFHNAIKLSA Trigger: TGCTGAGAGTTTAATTGCATTGTGGAACACTGACCAAGATGCCACAAAAGTGTTTCCAGCTCCAGTGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | TCTCTCTGCTCCTCACTGGAGCTGGAAACACTTTTGTaGCATCTTGGTCAGTGTTCCACAATGCAATTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLCSSLELETLL*HLGQCSTMQLN Trigger: GTTTAATTGCATTGTGGAACACTGACCAAGATGCCACAAAAGTGTTTCCAGCTCCAGTGAGGAGCAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | TTCATTCCATCCATGTCAGTTCCTTTGGGACAGAGGTaGCAACTAGACAGGCAGCAAGATGGAGTGATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FIPSMSVPLGQR*QLDRQQDGVIK Trigger: TTTAATCACTCCATCTTGCTGCCTGTCTAGTTGCCACCTCTGTCCCAAAGGAACTGACATGGATGGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR TCA 72 bp | TTCCAGAATGACACAATAGCTGACAAACGTAATAAGTaGTTGCTTGACCAGTCTCTCTGCTCCTCACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FQNDTIADKRNK*LLDQSLCSSLE Trigger: CTCCAGTGAGGAGCAGAGAGACTGGTCAAGCAATCACTTATTACGTTTGTCAGCTATTGTGTCATTCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CCA 72 bp | CTAGGACTGGAAGACACAGCATTAGCTTATCGACAGTaGCAGAAATATTTCTCTGTTGTAGTCGACACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGLEDTALAYRQ*QKYFSVVVDTA Trigger: AGCAGTGTCGACTACAACAGAGAAATATTTCTGCCACTGTCGATAAGCTAATGCTGTGTCTTCCAGTCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTTCTCCACCCATACCAGTGTTACCTGGTACTGAGAGTTTTGTTTTGTTTGCTTGGGACGTTTTCTaGAAAGATGGTAGCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSSPPIPVLPGTESFVLFAWDVF*KDGSCK Trigger: CTTACAGCTACCATCTTTCAAGAAAACGTCCCAAGC...AAACAAAACAAAACTCTCAGTACCAGGTAACACTGGTATGGGTGGAGAAGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTACCTATTCTAGGCTGTTGCAAGACAATGTTATCCAGGTTTCTTTGCTGTATCTGGTCCCTCAGTTaGCTGTACATCTCTAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LLPILGCCKTMLSRFLCCIWSLS*LYISRT Trigger: AGTCCTAGAGATGTACAGCAAACTGAGGGACCAGAT...ACAGCAAAGAAACCTGGATAACATTGTCTTGCAACAGCCTAGAATAGGTAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTTTGCTACCTATTCTAGGCTGTTGCAAGACAATGTTATCCAGGTTTCTTTCGATAGTGGCTCACTaGAGGCAGATAGGTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLLLPILGCCKTMLSRFLSIVAH*RQIGVF Trigger: GAACACACCTATCTGCCTCAAGTGAGCCACTATCGA...AAGAAACCTGGATAACATTGTCTTGCAACAGCCTAGAATAGGTAGCAAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR TCA 72 bp | AGTGAAACTGTCATCTTGCCACATGCCACACTCTCATaGGCCAATAATTCAACCAGCAAGGCAGATAGATAT | + |
|
Preference number: 3 (lower is better) Translates to: SETVILPHATLS*ANNSTSKADRY Trigger: ATATCTATCTGCCTTGCTGGTTGAATTATTGGCTCATGAGAGTGTGGCATGTGGCAAGATGACAGTTTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR TCA 72 bp | GCTAGTAAGTTTTGTGTATTCTTCTGTGACTCTTCCTaGACCTCTGGGCCATTATGTAGCCTGATGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASKFCVFFCDSS*TSGPLCSLMMR Trigger: TCTCATCATCAGGCTACATAATGGCCCAGAGGTTCAGGAAGAGTCACAGAAGAATACACAAAACTTACTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR TCA 72 bp | GTATGGGACTGTAGTTGTCAGAATCAAGTATATTTCTaGAAACCCCTGCCCACTTCTTCAATAGAGTCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: VWDCSCQNQVYF*KPLPTSSIESR Trigger: GCGAGACTCTATTGAAGAAGTGGGCAGGGGTTTTCAGAAATATACTTGATTCTGACAACTACAGTCCCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATATACATATGCTCTCTTaGAGGAAGAATGCACAAATG | + |
|
Preference number: 3 (lower is better) Translates to: CLCDVILLMTAGPEAIIHIHMLS*RKNAQM Trigger: CATTTGTGCATTCTTCCTCAAAGAGAGCATATGTAT...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCCCGACTTTGGACTTGTaGTCTCCACCTCTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRFPGSEAASCFVREQHSPTLDL*SPPLHQ Trigger: TTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGG...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | CATGGTGAGGGCACCCAGGCTACTTTCAGACTTCAGGGAATCTGGGCATTTAGACATCATAGACAGACCTaGGCGTGGGCCCGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGEGTQATFRLQGIWAFRHHRQT*AWARCR Trigger: CCTGCATCGGGCCCACGCTCAGGTCTGTCTATGATG...TCTAAATGCCCAGATTCCCTGAAGTCTGAAAGTAGCCTGGGTGCCCTCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CCTATTCTAGGCTGTTGCAAGACAATGTTATCCAGGTTTCTTTGCTGTTGGGCTCTCAGGATCCGCTCGTaGTCCGCCGCCGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PILGCCKTMLSRFLCCWALRIRS*SAAVSR Trigger: CCTGGAGACGGCGGCGGAGCACGAGCGGATCCTGAG...AGCCCAACAGCAAAGAAACCTGGATAACATTGTCTTGCAACAGCCTAGAATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| CDS-3UTR GCA 90 bp | CATGGTGAGGGCACCCAGGCTACTTTCAGACTTCAGGGAATCTGGGCATTTAGATGCAGGCCGTGTCTGTaGTCTCGATCTCCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGEGTQATFRLQGIWAFRCRPCL*SRSPSG Trigger: TCCTGAGGGAGATCGAGAGCACAGACACGGCCTGCA...TCTAAATGCCCAGATTCCCTGAAGTCTGAAAGTAGCCTGGGTGCCCTCACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATCTCAGGATCCGCTCGTaGTCCGCCGCCGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCDVILLMTAGPEAIIHLRIRS*SAAVSR Trigger: CCTGGAGACGGCGGCGGAGCACGAGCGGATCCTGAG...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCAATCAAGTATATTTCTaGAAACCCCTGCCCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRFPGSEAASCFVREQHSNQVYF*KPLPTS Trigger: AGAAGTGGGCAGGGGTTTTCAGAAATATACTTGATT...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCTTCCAGGAAGGTGTGTaGACACAGCAAAGGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQQSMRGEGSFWRFRWIFQEGV*TQQRCS Trigger: GGAGCACCTTTGCTGTGTTCACACACCTTCCTGGAA...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATGGAGATACTTGCAGTTaGGCTGTCCATAGTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSQCKVPLANFTGTPSQDGDTCS*AVHSRQ Trigger: TTGCCGACTATGGACAGCCCAACTGCAAGTATCTCC...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCTCCGGAGGAAGGCAATaGGGTCTACCAGGTAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VDDSWARGNNPLATVDPVSGGRQ*GLPGNH Trigger: GTGATTACCTGGTAGACCTCATTGCCTTCCTCCGGA...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCGACATACATGCTGTCTaGGCCACCTTTCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDDSWARGNNPLATVDPVDIHAV*ATFPGR Trigger: CCTTCCTGGAAAGGTGGCTCAGACAGCATGTATGTC...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | TTTATTTCCTCCCGAAGCTTGGGGATGTTGTCCACCATCACCTTACAGAATCGATGCAGGCCGTGTCTGTaGTCTCGATCTCCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FISSRSLGMLSTITLQNRCRPCL*SRSPSG Trigger: TCCTGAGGGAGATCGAGAGCACAGACACGGCCTGCA...TCGATTCTGTAAGGTGATGGTGGACAACATCCCCAAGCTTCGGGAGGAAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCTTTGTCAGAGAACAGCACAGCAGACGCAGAGCTGGGCAAAGGCAAGCCCAATTTTGTCTGAATaGTTGCGGATGCTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLLCQRTAQQTQSWAKASPILSE*LRMLSR Trigger: TCTGGAGAGCATCCGCAAGCATTCAGACAAAATTGG...GCTTGCCTTTGCCCAGCTCTGCGTCTGCTGTGCTGTTCTCTGACAAAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCATTTTTCCGGAACTGTaGAAACATGTTATTCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRFPGSEAASCFVREQHSIFPEL*KHVILA Trigger: CGCAAGAATAACATGTTTGCACAGTTCCGGAAAAAT...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 72 bp | CAGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTaGGAGGTTCAGATGGATCTCACTGCTTTTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPAAEHERRRFL*EVQMDLTAFLP Trigger: TGGGAGAAAAGCAGTGAGATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTGCAATGCTCCCAAAGTaGGCTGCCGTACTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIAMLPK*AAVLPL Trigger: AAGCGGAAGTACGGCAGCTCACTTTGGGAGCATTGC...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGTGTTGTAGTCGACACTaGTTCAGCTCCTCCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QALVKKGPFLPSQSVRFVCCSRH*FSSSIA Trigger: AGCAATGGAGGAGCTGAAGCAGTGTCGACTACAACA...CACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCCTTTGCTGTTGGGCTTaGTTCATGGCAGTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VDDSWARGNNPLATVDPVLCCWA*FMAVSP Trigger: TGGAGAGACTGCCATGAAGCAAGCCCAACAGCAAAG...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGACATCCAGGTTGAACTaGTGCAATGCTCCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QALVKKGPFLPSQSVRFVTSRLN*CNAPKV Trigger: CACTTTGGGAGCATTGCAGCAGTTCAACCTGGATGT...CACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGCAGCAGTCAGGCTAACAGCTTCTACAAGTGTCTCAGTGCAAAGTCCCTCAGGTTTCTTTGCTGTTaGGCTTGCTTCATGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSQANSFYKCLSAKSLRFLCC*ACFMAV Trigger: GACTGCCATGAAGCAAGCCCAACAGCAAAGAAACCT...GAGGGACTTTGCACTGAGACACTTGTAGAAGCTGTTAGCCTGACTGCTGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCATATTAGACGGAGGCTaGAGTACCAAACGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLQQSMRGEGSFWRFRWIILDGG*STKRAC Trigger: ACAGGCTCGTTTGGTACTCCAGCCTCCGTCTAATAT...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATGTTGCATCAAGGATGTaGCTAAATGCTTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSQCKVPLANFTGTPSQDVASRM*LNACKL Trigger: CAGCTTGCAAGCATTTAGCCACATCCTTGATGCAAC...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACGCACCGGGCCGGATCTaGCAAACTGTTCACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNAPGRI*QTVHIL Trigger: GAGAATGTGAACAGTTTGCCAGATCCGGCCCGGTGC...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 72 bp | TTCTCTGTTGTAGTCGACACTGCTTCAGCTCCTCCATaGCTATTACCAGTTCCTTGCCCTCGTGCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSVVVDTASAPP*LLPVPCPRAAV Trigger: AACTGCAGCACGAGGGCAAGGAACTGGTAATAGCAATGGAGGAGCTGAAGCAGTGTCGACTACAACAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR CAA 72 bp | GTCCACCATCACCTTACAGAATCGATAGTGGCTCACTaGAGGCAGATAGGTGTGTTCCAGATGCTCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VHHHLTESIVAH*RQIGVFQMLQC Trigger: ACACTGGAGCATCTGGAACACACCTATCTGCCTCAAGTGAGCCACTATCGATTCTGTAAGGTGATGGTGGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| 3UTR CAA 72 bp | AGTAGGACGAGTGGGTACGCAATGCTGCGATGGTCTTaGAAAGGGCCATTTCCCACAGTTCATCAATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTSGYAMLRWS*KGPFPTVHQCR Trigger: CCTACATTGATGAACTGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCATTGCGTACCCACTCGTCCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| CDS-3UTR TCA 90 bp | CATGGTGAGGGCACCCAGGCTACTTTCAGACTTCAGGGAATCTGGGCATTTAGATTTCTAGCTTCTCCATaGATCGTCCATGTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HGEGTQATFRLQGIWAFRFLASP*IVHVPH Trigger: GTGAGGAACATGGACGATTCATGGAGAAGCTAGAAA...TCTAAATGCCCAGATTCCCTGAAGTCTGAAAGTAGCCTGGGTGCCCTCACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACTGCTGCGATGGTCTTTaGAAGGGCCATTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNCCDGL*KGHFPQ Trigger: CTGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCA...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTGTTGTCTCAAGTCGATaGAGGCCAACTGCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIVVSSR*RPTAAC Trigger: ACACGCTGCAGTTGGCCTTCATCGACTTGAGACAAC...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCCTCCAGTGTCTTCAGTaGAGGATAATGCCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLQQSMRGEGSFWRFRWILQCLQ*RIMPFG Trigger: ACCAAAAGGCATTATCCTGCACTGAAGACACTGGAG...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCTCAGTGCAAAGTCCCTCTGGCCAACTTCACAGGAACGCCTTCACAGGATTTTTGTCTGAATGCTTaGGGATGCTCTCCAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQCKVPLANFTGTPSQDFCLNA*GCSPES Trigger: ACTTTCTGGAGAGCATCCGCAAGCATTCAGACAAAA...ATCCTGTGAAGGCGTTCCTGTGAAGTTGGCCAGAGGGACTTTGCACTGAGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTGTTGAACTGCTGCAATaGTCCCAAAGTGAGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIVELLQ*SQSELP Trigger: CGGCAGCTCACTTTGGGAGCATTGCAGCAGTTCAAC...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGTTAGTGTCCGTCACCTaGTTTTTGAGTTTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QALVKKGPFLPSQSVRFVLVSVT*FLSFWA Trigger: AGCCCAGAAACTCAAAAACCAGGTGACGGACACTAA...CACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTGTCCTCGGAGCTGCTTaGCCACGGTGTCAATCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIVLGAA*PRCQSI Trigger: AATTGATTGACACCGTGGCCAAGCAGCTCCGAGGAC...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 72 bp | GGTTGTGCCCAAGGGTGTAGAGCTTGGGACGTTTTCTaGAAAGATGGTAGCTGTAAGGCTGTCATCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GCAQGCRAWDVF*KDGSCKAVIKT Trigger: TGTCTTGATGACAGCCTTACAGCTACCATCTTTCAAGAAAACGTCCCAAGCTCTACACCCTTGGGCACAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 72 bp | CTTCCACATCCAGAATTCCCGAATCCTGTTCCGACTTaGGACTTGTGCTCTCCACCTCTGCATCAAAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: LPHPEFPNPVPT*DLCSPPLHQRL Trigger: CAATCTTTGATGCAGAGGTGGAGAGCACAAGTCCAAAGTCGGAACAGGATTCGGGAATTCTGGATGTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACTCCTTGCCCTCGTGCTaGAGTTTCCTATTAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNSLPSC*SFLLVS Trigger: GGACACTAATAGGAAACTGCAGCACGAGGGCAAGGA...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGTTATCCAGGTTTCTTTaGTGTTGGGCTTGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QALVKKGPFLPSQSVRFVLSRFL*CWACFM Trigger: CATGAAGCAAGCCCAACAGCAAAGAAACCTGGATAA...CACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCCTCTTAATGACGTTCTaGAGAGAGTTGCTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VDDSWARGNNPLATVDPVLLMTF*RELLRV Trigger: GACTCTGAGCAACTCTCTGCAGAACGTCATTAAGAG...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACTCCAGGTTGAACTGCTaGAATGCTCCCAAAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNSRLNC*NAPKVS Trigger: GCTCACTTTGGGAGCATTGCAGCAGTTCAACCTGGA...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTTTTCCTCCCGAAGCTTaGGGATGTTGTCCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIFPPEA*GCCPPS Trigger: TGATGGTGGACAACATCCCCAAGCTTCGGGAGGAAA...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | CATGGTGAGGGCACCCAGGCTACTTTCAGACTTCAGGGAATCTGGGCATTTAGACTCTTCACTTGTTACTaGTATGGGACTGTAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HGEGTQATFRLQGIWAFRLFTCY*YGTVVV Trigger: GACAACTACAGTCCCATACCAGTAACAAGTGAAGAG...TCTAAATGCCCAGATTCCCTGAAGTCTGAAAGTAGCCTGGGTGCCCTCACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGCAGTCAGGCTAACAGCTTCTACAAGTGTCTCAGTGCAAAGTCCCTCCGCTGTACTGGTCTCTaGTTTCTAACAACATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSQANSFYKCLSAKSLRCTGL*FLTTYQ Trigger: TTGATATGTTGTTAGAAATCAGAGACCAGTACAGCG...GAGGGACTTTGCACTGAGACACTTGTAGAAGCTGTTAGCCTGACTGCTGCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CATAGTCATGTCTGCCAGGCTCTACTTATGTACTTAAGCAAATACTTGAGAGCATCGATGAAGGCCAACTaGAGCGTGTCCTCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSHVCQALLMYLSKYLRASMKAN*SVSSWN Trigger: GTTCCAGGAGGACACGCTGCAGTTGGCCTTCATCGA...TGCTCTCAAGTATTTGCTTAAGTACATAAGTAGAGCCTGGCAGACATGACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CATAGTCATGTCTGCCAGGCTCTACTTATGTACTTAAGCAAATACTTGAGAGCAATGAGTCCTCGGAGCTaGTTGGCCACGGTGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: HSHVCQALLMYLSKYLRAMSPRS*LATVSI Trigger: GATTGACACCGTGGCCAAGCAGCTCCGAGGACTCAT...TGCTCTCAAGTATTTGCTTAAGTACATAAGTAGAGCCTGGCAGACATGACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 72 bp | AGCAAGGCAGATAGATATCCTAAACTGAGGCTGGCTTaGGCATACTACATAGTCATGTCTGCCAGGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SKADRYPKLRLA*AYYIVMSARLY Trigger: GTAGAGCCTGGCAGACATGACTATGTAGTATGCCAAAGCCAGCCTCAGTTTAGGATATCTATCTGCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTGTGGACCAATCCCACTaGATAAAGAGGTCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIVDQSH*IKRSNS Trigger: ACTATTGGACCTCTTTATTCAGTGGGATTGGTCCAC...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCTATCTCTTCTTCAGCTaGATGTCTAGCATCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDDSWARGNNPLATVDPVYLFFS*MSSILE Trigger: TTCAAGGATGCTAGACATGCAGCTGAAGAAGAGATA...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| CDS-3UTR CCA 90 bp | CTGGACGGACTGTCAGGCCTGATGCATGATAGAGTCACTGGGAGATACTGCTTTCTGGTTGTAAACTTTTaGCACAAATTCAGAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGLSGLMHDRVTGRYCFLVVNF*HKFRER Trigger: CCTTTCTCTGAATTTGTGCCAAAAGTTTACAACCAG...AAAGCAGTATCTCCCAGTGACTCTATCATGCATCAGGCCTGACAGTCCGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| CDS-3UTR CCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACCTACCAGGTAATCACTaGCTTTGTTGTCTAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNLPGNH*LCCLGL Trigger: GAGACCTAGACAACAAAGCCAGTGATTACCTGGTAG...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 72 bp | TTCAGGGAATCTGGGCATTTAGAGATGCTGCTGGAATaGAGTGTGAGACTCTCAGGGACCTTAAGAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRESGHLEMLLE*SVRLSGTLRIA Trigger: AGCAATTCTTAAGGTCCCTGAGAGTCTCACACTCAATTCCAGCAGCATCTCTAAATGCCCAGATTCCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTTCGATTTCTCTGTCATaGTTGCGGATACGAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKISISLS*LRIRVS Trigger: AGAAACTCGTATCCGCAATCATGACAGAGAAATCGA...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| CDS-3UTR TCA 90 bp | CATAGTCATGTCTGCCAGGCTCTACTTATGTACTTAAGCAAATACTTGAGAGCAAAATCCACCAAGTCTTaGGCCCCAGGTACCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSHVCQALLMYLSKYLRAKSTKS*APGTSS Trigger: TGAAGAGGTACCTGGGGCTCAAGACTTGGTGGATTT...TGCTCTCAAGTATTTGCTTAAGTACATAAGTAGAGCCTGGCAGACATGACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| CDS-3UTR GCA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATTCTGGTCCCTCAGTTTaGTGTACATCTCTAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCDVILLMTAGPEAIIHSGPSV*CTSLGL Trigger: CAGTCCTAGAGATGTACAGCAAACTGAGGGACCAGA...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACCCTATTCTAGGCTGTTaGAAGACAATGTTATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNPILGC*KTMLSR Trigger: CCTGGATAACATTGTCTTGCAACAGCCTAGAATAGG...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| CDS-3UTR GCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACATGTGGCTAAATGCTTaGAAGCTGACATACATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNMWLNA*KLTYML Trigger: CAGCATGTATGTCAGCTTGCAAGCATTTAGCCACAT...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGGTGTCAATCAATTTCTaGTTATCTCGCTCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QALVKKGPFLPSQSVRFVVSINF*LSRSFF Trigger: GAAAAATGAGCGAGATAAGCAGAAATTGATTGACAC...CACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTCAGGATAATGCCTTTTaGTTTTCATCTGGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIQDNAF*FSSGPS Trigger: TGAGGGACCAGATGAAAACCAAAAGGCATTATCCTG...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACCCGCAAAGAGTACAATaGGGTTCTTCAAATCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNPQRVQ*GSSNLT Trigger: TGTTAGATTTGAAGAACCTCATTGTACTCTTTGCGG...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTTTTCTCTGTCATGATTaGGGATACGAGTTTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIFLCHD*GYEFLA Trigger: AGCTAGAAACTCGTATCCGCAATCATGACAGAGAAA...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACCCTGGTAGTGAAAGTTaGACATTTTCTCGATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNPGSES*TFSRFL Trigger: GAGAAATCGAGAAAATGTGCAACTTTCACTACCAGG...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACAAGGATGTGGCTAAATaGTTGCAAGCTGACATACAT | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNKDVAK*LQADIH Trigger: ATGTATGTCAGCTTGCAAGCATTTAGCCACATCCTT...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATGTTGGGCTTGCTTCATaGCAGTCTCTCCAATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCDVILLMTAGPEAIIHVGLAS*QSLQFC Trigger: ACAAAATTGGAGAGACTGCCATGAAGCAAGCCCAAC...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACCACTTGTTACTGGTATaGGACTGTAGTTGTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNHLLLV*DCSCQN Trigger: ATTCTGACAACTACAGTCCCATACCAGTAACAAGTG...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTCTCCACCCATACCAGTGTTACCTGGTACTGAGAGTTTTGTTTTGTTTTACCATAAAGCTTGGTaGTATGGACCGTCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSPPIPVLPGTESFVLFYHKAW*YGPSLE Trigger: TTCCAGAGACGGTCCATACCACCAAGCTTTATGGTA...AAACAAAACAAAACTCTCAGTACCAGGTAACACTGGTATGGGTGGAGAAGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATTCCAGTTCTATATCTTaGAACGGGAATTGTCCTACG | + |
|
Preference number: 4 (lower is better) Translates to: CLCDVILLMTAGPEAIIHSSSIS*NGNCPT Trigger: CGTAGGACAATTCCCGTTTCAAGATATAGAACTGGA...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATAGAGTCTCGCTGTACTaGTCTCTGATTTCTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLCDVILLMTAGPEAIIHRVSLY*SLISNN Trigger: GTTGTTAGAAATCAGAGACCAGTACAGCGAGACTCT...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATGCTTCTAGCAAAAGTTaGATCAAGGATGTGGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLCDVILLMTAGPEAIIHASSKS*IKDVAK Trigger: TTTAGCCACATCCTTGATGCAACTTTTGCTAGAAGC...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACAAACTTTTTGGGAAATaGCTGCTTTTCCAGTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFRWISLLFSHKCGTAQNKLFGK*LLFQFY Trigger: ATAGAACTGGAAAAGCAGCCATTTCCCAAAAAGTTT...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | CATAGTCATGTCTGCCAGGCTCTACTTATGTACTTAAGCAAATACTTGAGAGCAGGTATGGACCGTCTCTaGAAGGACATTAGTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: HSHVCQALLMYLSKYLRAGMDRL*KDISDI Trigger: AATATCACTAATGTCCTTCCAGAGACGGTCCATACC...TGCTCTCAAGTATTTGCTTAAGTACATAAGTAGAGCCTGGCAGACATGACTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTCTCCACCCATACCAGTGTTACCTGGTACTGAGAGTTTTGTTTTGTTTAGCCTACAATTTGATTaGAATACTTCCTGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSPPIPVLPGTESFVLFSLQFD*NTSCSH Trigger: ATGGCTACAGGAAGTATTTCAATCAAATTGTAGGCT...AAACAAAACAAAACTCTCAGTACCAGGTAACACTGGTATGGGTGGAGAAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CCA 90 bp | CATAGTCATGTCTGCCAGGCTCTACTTATGTACTTAAGCAAATACTTGAGAGCATTAGCTTATCGACAGTaGCAGAAATATTTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSHVCQALLMYLSKYLRALAYRQ*QKYFSV Trigger: AACAGAGAAATATTTCTGCCACTGTCGATAAGCTAA...TGCTCTCAAGTATTTGCTTAAGTACATAAGTAGAGCCTGGCAGACATGACTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| 3UTR CAA 72 bp | TTTCTTAGATTTCCTTTTGCTACCTATTCTAGGCTGTaGCAAGACAATGTTATCCAGGTTTCTTTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRFPFATYSRL*QDNVIQVSLLL Trigger: CAACAGCAAAGAAACCTGGATAACATTGTCTTGCAACAGCCTAGAATAGGTAGCAAAAGGAAATCTAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162821.8 |
||
| CDS-3UTR CAA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCTCTCTGACATCCAGGTaGAACTGCTGCAATGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRFPGSEAASCFVREQHSSLTSR*NCCNAP Trigger: GGGAGCATTGCAGCAGTTCAACCTGGATGTCAGAGA...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCATGCTGCGATGGTCTTaGAAAGGGCCATTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PRFPGSEAASCFVREQHSMLRWS*KGPFPT Trigger: TGTGGGAAATGGCCCTTTCAAAGACCATCGCAGCAT...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCATCTGGTCCCTCAGTTaGCTGTACATCTCTAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PRFPGSEAASCFVREQHSIWSLS*LYISRT Trigger: AGTCCTAGAGATGTACAGCAAACTGAGGGACCAGAT...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CAAGCCCTGGTGAAGAAAGGGCCTTTCCTTCCTTCTCAGTCAGTCAGGTTTGTGAGTCCTCGGAGCTGCTaGGCCACGGTGTCAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QALVKKGPFLPSQSVRFVSPRSC*ATVSIN Trigger: ATTGATTGACACCGTGGCCAAGCAGCTCCGAGGACT...CACAAACCTGACTGACTGAGAAGGAAGGAAAGGCCCTTTCTTCACCAGGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CATGGTGAGGGCACCCAGGCTACTTTCAGACTTCAGGGAATCTGGGCATTTAGATCTTTGCTGTTGGGCTaGCTTCATGGCAGTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HGEGTQATFRLQGIWAFRSLLLG*LHGSLS Trigger: GGAGAGACTGCCATGAAGCAAGCCCAACAGCAAAGA...TCTAAATGCCCAGATTCCCTGAAGTCTGAAAGTAGCCTGGGTGCCCTCACCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCACGTTCTGCAGAGAGTaGCTCAGAGTCCTGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDDSWARGNNPLATVDPVTFCRE*LRVLVS Trigger: GCTGACCAGGACTCTGAGCAACTCTCTGCAGAACGT...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CCCCGCTTTCCCGGCTCAGAGGCAGCAAGCTGCTTTGTCAGAGAACAGCACAGCTCCAAGTGTGTTGTATaGATGATAATCTGGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRFPGSEAASCFVREQHSSKCVV*MIIWTS Trigger: GCTTGTCCAGATTATCATCAATACAACACACTTGGA...GCTGTGCTGTTCTCTGACAAAGCAGCTTGCTGCCTCTGAGCCGGGAAAGCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CTCAGCAGCAGTCAGGCTAACAGCTTCTACAAGTGTCTCAGTGCAAAGTCCCTCTCGATAGTGGCTCACTaGAGGCAGATAGGTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSQANSFYKCLSAKSLSIVAH*RQIGVF Trigger: GAACACACCTATCTGCCTCAAGTGAGCCACTATCGA...GAGGGACTTTGCACTGAGACACTTGTAGAAGCTGTTAGCCTGACTGCTGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCGAAATCCACCAAGTCTaGAGCCCCAGGTACCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VDDSWARGNNPLATVDPVEIHQV*SPRYLF Trigger: GAAGAGGTACCTGGGGCTCAAGACTTGGTGGATTTC...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 90 bp | TCTCTGACATCCAGGTTGAACTGCTGCAATGCTCCCAAAGTGAGCTaGCGTACTTCCGCTTCTAGCAAAAGTTGCATCAAGGATGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLTSRLNCCNAPKVS*RTSASSKSCIKDVA Trigger: AGCCACATCCTTGATGCAACTTTTGCTAGAAGCGGAAGTACGGCAGCTCACTTTGGGAGCATTGCAGCAGTTCAACCTGGATGTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CCA 90 bp | AGTTCCTTGCCCTCGTGCTGCAGTTTCCTATTAGTGTCCGTCACCTaGTTTTTGAGTTTCTGGGCTTCTCCTCGTACTTTCAGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLPSCCSFLLVSVT*FLSFWASPRTFSSS Trigger: TGAGCTGCTGAAAGTACGAGGAGAAGCCCAGAAACTCAAAAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGGCAAGGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 90 bp | TGCTTCAGCTCCTCCATTGCTATTACCAGTTCCTTGCCCTCGTGCTaGAGTTTCCTATTAGTGTCCGTCACCTGGTTTTTGAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFSSSIAITSSLPSC*SFLLVSVTWFLSFW Trigger: CCAGAAACTCAAAAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGGCAAGGAACTGGTAATAGCAATGGAGGAGCTGAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 90 bp | CACTGCTTCAGCTCCTCCATTGCTATTACCAGTTCCTTGCCCTCGTaGTGCAGTTTCCTATTAGTGTCCGTCACCTGGTTTTTGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HCFSSSIAITSSLPS*CSFLLVSVTWFLSF Trigger: GAAACTCAAAAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGGCAAGGAACTGGTAATAGCAATGGAGGAGCTGAAGCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | AGAGATGAATGGCATGGGGACTGGAGTCCTGACCCAACTTGGCTTTTTAAGATTATTTCCTCCCGAAGCTaGGGGATGTTGTCCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: RDEWHGDWSPDPTWLFKIISSRS*GMLSTI Trigger: GATGGTGGACAACATCCCCAAGCTTCGGGAGGAAAT...AATCTTAAAAAGCCAAGTTGGGTCAGGACTCCAGTCCCCATGCCATTCATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCAGCAGAGCATGAGAGGAGAAGGTTCCTTTTGGAGGTTCAGATGGATCAATCTAACACGAGGTTaGGATCAGAACAGTAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SLQQSMRGEGSFWRFRWINLTRG*DQNSRT Trigger: CGTCCTACTGTTCTGATCCAAACCTCGTGTTAGATT...GATCCATCTGAACCTCCAAAAGGAACCTTCTCCTCTCATGCTCTGCTGCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CATGGTGAGGGCACCCAGGCTACTTTCAGACTTCAGGGAATCTGGGCATTTAGAAGGACATTAGTGATATaGGTGATGAATTCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGEGTQATFRLQGIWAFRRTLVI*VMNSSR Trigger: CCTGGAGGAATTCATCACCAATATCACTAATGTCCT...TCTAAATGCCCAGATTCCCTGAAGTCTGAAAGTAGCCTGGGTGCCCTCACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCGATGTGGCTAAATGCTaGCAAGCTGACATACATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VDDSWARGNNPLATVDPVDVAKC*QADIHA Trigger: AGCATGTATGTCAGCTTGCAAGCATTTAGCCACATC...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 90 bp | TGGACAAGCTCAGTAAGGCCAATGTTCTTCCTCTTAATGACGTTCTaGAGAGAGTTGCTCAGAGTCCTGGTCAGCAACAAGTTTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WTSSVRPMFFLLMTF*RELLRVLVSNKFVD Trigger: GTCTACAAACTTGTTGCTGACCAGGACTCTGAGCAACTCTCTGCAGAACGTCATTAAGAGGAAGAACATTGGCCTTACTGAGCTTGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 90 bp | AATGCTCCCAAAGTGAGCTGCCGTACTTCCGCTTCTAGCAAAAGTTaGATCAAGGATGTGGCTAAATGCTTGCAAGCTGACATACATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NAPKVSCRTSASSKS*IKDVAKCLQADIHA Trigger: AGCATGTATGTCAGCTTGCAAGCATTTAGCCACATCCTTGATGCAACTTTTGCTAGAAGCGGAAGTACGGCAGCTCACTTTGGGAGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 90 bp | CTGATGAGTCCTCGGAGCTGCTTGGCCACGGTGTCAATCAATTTCTaGTTATCTCGCTCATTTTTCCGGAACTGTGCAAACATGTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: LMSPRSCLATVSINF*LSRSFFRNCANMLF Trigger: GAATAACATGTTTGCACAGTTCCGGAAAAATGAGCGAGATAAGCAGAAATTGATTGACACCGTGGCCAAGCAGCTCCGAGGACTCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | TGCTCTTCTCCACCCATACCAGTGTTACCTGGTACTGAGAGTTTTGTTTTGTTTCGAAGCTTGGGGATGTaGTCCACCATCACCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSPPIPVLPGTESFVLFRSLGM*STITLQ Trigger: CTGTAAGGTGATGGTGGACAACATCCCCAAGCTTCG...AAACAAAACAAAACTCTCAGTACCAGGTAACACTGGTATGGGTGGAGAAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACGCAGTCTCTCCAATTTaGTCTGAATGCTTGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RFRWISLLFSHKCGTAQNAVSPI*SECLRM Trigger: CATCCGCAAGCATTCAGACAAAATTGGAGAGACTGC...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCACCTATTCTAGGCTGTaGCAAGACAATGTTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VDDSWARGNNPLATVDPVTYSRL*QDNVIQ Trigger: CTGGATAACATTGTCTTGCAACAGCCTAGAATAGGT...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | TGCTCTTCTCCACCCATACCAGTGTTACCTGGTACTGAGAGTTTTGTTTTGTTTTCCGTCACCTGGTTTTaGAGTTTCTGGGCTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSPPIPVLPGTESFVLFSVTWF*SFWASP Trigger: AGGAGAAGCCCAGAAACTCAAAAACCAGGTGACGGA...AAACAAAACAAAACTCTCAGTACCAGGTAACACTGGTATGGGTGGAGAAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | GTTGATGACAGCTGGGCCAGAGGCAATAATCCATTAGCTACAGTTGACCCTGTCTATATGTCTCTTCACTaGTTACTGGTATGGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VDDSWARGNNPLATVDPVYMSLH*LLVWDC Trigger: ACAGTCCCATACCAGTAACAAGTGAAGAGACATATA...GACAGGGTCAACTGTAGCTAATGGATTATTGCCTCTGGCCCAGCTGTCATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CCA 90 bp | CTTGAAAGTTGTGGTACCATAAAGCTTGGTGGTATGGACCGTCTCTaGAAGGACATTAGTGATATTGGTGATGAATTCCTCCAGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: LESCGTIKLGGMDRL*KDISDIGDEFLQVF Trigger: AAATACCTGGAGGAATTCATCACCAATATCACTAATGTCCTTCCAGAGACGGTCCATACCACCAAGCTTTATGGTACCACAACTTTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | CATAGTCATGTCTGCCAGGCTCTACTTATGTACTTAAGCAAATACTTGAGAGCAGTTATCCAGGTTTCTTaGCTGTTGGGCTTGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSHVCQALLMYLSKYLRAVIQVS*LLGLLH Trigger: ATGAAGCAAGCCCAACAGCAAAGAAACCTGGATAAC...TGCTCTCAAGTATTTGCTTAAGTACATAAGTAGAGCCTGGCAGACATGACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTCAGATGGATCTCACTGCTTTTCTCCCACAAATGTGGAACTGCGCAAAACTCTGGTTGTAAACTTTaGGCACAAATTCAGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RFRWISLLFSHKCGTAQNSGCKL*AQIQRK Trigger: CTTTCTCTGAATTTGTGCCAAAAGTTTACAACCAGA...GTTTTGCGCAGTTCCACATTTGTGGGAGAAAAGCAGTGAGATCCATCTGAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS-3UTR CAA 90 bp | TGTCTCTGTGATGTTATTTTGTTGATGACAGCTGGGCCAGAGGCAATAATCCATGCAAACATGTTATTCTaGCGGCTAGTATCTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CLCDVILLMTAGPEAIIHANMLF*RLVSFI Trigger: GATGAAAGATACTAGCCGCAAGAATAACATGTTTGC...ATGGATTATTGCCTCTGGCCCAGCTGTCATCAACAAAATAACATCACAGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 90 bp | GGTGTCAATCAATTTCTGCTTATCTCGCTCATTTTTCCGGAACTGTaGAAACATGTTATTCTTGCGGCTAGTATCTTTCATCTTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVNQFLLISLIFPEL*KHVILAASIFHLLK Trigger: CTTGAGAAGATGAAAGATACTAGCCGCAAGAATAACATGTTTGCACAGTTCCGGAAAAATGAGCGAGATAAGCAGAAATTGATTGACACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 72 bp | AGGTCCAATAGTTGTCTCAAGTCGATGAAGGCCAACTaGAGCGTGTCCTCCTGGAACCCAGGCACCGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSNSCLKSMKAN*SVSSWNPGTGP Trigger: CGGCCCGGTGCCTGGGTTCCAGGAGGACACGCTGCAGTTGGCCTTCATCGACTTGAGACAACTATTGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CAA 90 bp | TGTAGTCGACACTGCTTCAGCTCCTCCATTGCTATTACCAGTTCCTaGCCCTCGTGCTGCAGTTTCCTATTAGTGTCCGTCACCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSRHCFSSSIAITSS*PSCCSFLLVSVTWF Trigger: AAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGGCAAGGAACTGGTAATAGCAATGGAGGAGCTGAAGCAGTGTCGACTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 72 bp | AGCTCCTCCATTGCTATTACCAGTTCCTTGCCCTCGTaGTGCAGTTTCCTATTAGTGTCCGTCACCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSIAITSSLPS*CSFLLVSVTWF Trigger: AAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGGCAAGGAACTGGTAATAGCAATGGAGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 72 bp | TCCAGGTTGAACTGCTGCAATGCTCCCAAAGTGAGCTaGCGTACTTCCGCTTCTAGCAAAAGTTGCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRLNCCNAPKVS*RTSASSKSCIK Trigger: CTTGATGCAACTTTTGCTAGAAGCGGAAGTACGGCAGCTCACTTTGGGAGCATTGCAGCAGTTCAACCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 72 bp | AACTGTTCACATTCTCTGACATCCAGGTTGAACTGCTaGAATGCTCCCAAAGTGAGCTGCCGTACTTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: NCSHSLTSRLNC*NAPKVSCRTSA Trigger: AGCGGAAGTACGGCAGCTCACTTTGGGAGCATTGCAGCAGTTCAACCTGGATGTCAGAGAATGTGAACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 72 bp | CCTCGGAGCTGCTTGGCCACGGTGTCAATCAATTTCTaGTTATCTCGCTCATTTTTCCGGAACTGTGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRSCLATVSINF*LSRSFFRNCAN Trigger: GTTTGCACAGTTCCGGAAAAATGAGCGAGATAAGCAGAAATTGATTGACACCGTGGCCAAGCAGCTCCGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CCA 72 bp | CCCTCGTGCTGCAGTTTCCTATTAGTGTCCGTCACCTaGTTTTTGAGTTTCTGGGCTTCTCCTCGTACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSCCSFLLVSVT*FLSFWASPRTF Trigger: GAAAGTACGAGGAGAAGCCCAGAAACTCAAAAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 72 bp | TCCTCCATTGCTATTACCAGTTCCTTGCCCTCGTGCTaGAGTTTCCTATTAGTGTCCGTCACCTGGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSIAITSSLPSC*SFLLVSVTWFL Trigger: CAAAAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGGCAAGGAACTGGTAATAGCAATGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CAA 72 bp | TGCTGCAGTTTCCTATTAGTGTCCGTCACCTGGTTTTaGAGTTTCTGGGCTTCTCCTCGTACTTTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CCSFLLVSVTWF*SFWASPRTFSS Trigger: GCTGCTGAAAGTACGAGGAGAAGCCCAGAAACTCAAAAACCAGGTGACGGACACTAATAGGAAACTGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CAA 90 bp | TTGCCCTCGTGCTGCAGTTTCCTATTAGTGTCCGTCACCTGGTTTTaGAGTTTCTGGGCTTCTCCTCGTACTTTCAGCAGCTCAGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: LPSCCSFLLVSVTWF*SFWASPRTFSSSVI Trigger: TATTACTGAGCTGCTGAAAGTACGAGGAGAAGCCCAGAAACTCAAAAACCAGGTGACGGACACTAATAGGAAACTGCAGCACGAGGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS GCA 72 bp | TCAGTAAGGCCAATGTTCTTCCTCTTAATGACGTTCTaGAGAGAGTTGCTCAGAGTCCTGGTCAGCAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVRPMFFLLMTF*RELLRVLVSNK Trigger: CTTGTTGCTGACCAGGACTCTGAGCAACTCTCTGCAGAACGTCATTAAGAGGAAGAACATTGGCCTTACTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CAA 90 bp | TCAGTAAGGCCAATGTTCTTCCTCTTAATGACGTTCTGCAGAGAGTaGCTCAGAGTCCTGGTCAGCAACAAGTTTGTAGACTTACGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SVRPMFFLLMTFCRE*LRVLVSNKFVDLRI Trigger: GATCCGTAAGTCTACAAACTTGTTGCTGACCAGGACTCTGAGCAACTCTCTGCAGAACGTCATTAAGAGGAAGAACATTGGCCTTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS TCA 72 bp | TGTCATGATTGCGGATACGAGTTTCTAGCTTCTCCATaGATCGTCCATGTTCCTCACCATCATAGACAGACC | + |
|
Preference number: 6 (lower is better) Translates to: CHDCGYEFLASP*IVHVPHHHRQT Trigger: GGTCTGTCTATGATGGTGAGGAACATGGACGATTCATGGAGAAGCTAGAAACTCGTATCCGCAATCATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CAA 72 bp | CCAATGTTCTTCCTCTTAATGACGTTCTGCAGAGAGTaGCTCAGAGTCCTGGTCAGCAACAAGTTTGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PMFFLLMTFCRE*LRVLVSNKFVD Trigger: GTCTACAAACTTGTTGCTGACCAGGACTCTGAGCAACTCTCTGCAGAACGTCATTAAGAGGAAGAACATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CCA 72 bp | TGTGGTACCATAAAGCTTGGTGGTATGGACCGTCTCTaGAAGGACATTAGTGATATTGGTGATGAATTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CGTIKLGGMDRL*KDISDIGDEFL Trigger: GAGGAATTCATCACCAATATCACTAATGTCCTTCCAGAGACGGTCCATACCACCAAGCTTTATGGTACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CCA 72 bp | GTACTTCCGCTTCTAGCAAAAGTTGCATCAAGGATGTaGCTAAATGCTTGCAAGCTGACATACATGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLPLLAKVASRM*LNACKLTYMLS Trigger: AGACAGCATGTATGTCAGCTTGCAAGCATTTAGCCACATCCTTGATGCAACTTTTGCTAGAAGCGGAAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
||
| CDS CAA 72 bp | TCCAGGTATTTACAGGACTTCTCCAAGTGTGTTGTATaGATGATAATCTGGACAAGCTCAGTAAGGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SRYLQDFSKCVV*MIIWTSSVRPM Trigger: CATTGGCCTTACTGAGCTTGTCCAGATTATCATCAATACAACACACTTGGAGAAGTCCTGTAAATACCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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| CDS CAA 90 bp | ATGAATTCCTCCAGGTATTTACAGGACTTCTCCAAGTGTGTTGTATaGATGATAATCTGGACAAGCTCAGTAAGGCCAATGTTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: MNSSRYLQDFSKCVV*MIIWTSSVRPMFFL Trigger: GAGGAAGAACATTGGCCTTACTGAGCTTGTCCAGATTATCATCAATACAACACACTTGGAGAAGTCCTGTAAATACCTGGAGGAATTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160197.6 |
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