Pregenerated sensors for EXOC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053799Ensembl transcript IDs: ENSMUST00000066439.8, ENSMUST00000238817.2, ENSMUST00000238954.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GAACTTTCAAGATCTCTGTGCTTCCTCTCTCAGACCCTGCAGAACTaGTACTCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTA | + |
Preference number: 1 (lower is better) Translates to: ELSRSLCFLSQTLQN*YSWAIHVSHTEVKL Trigger: TAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGAGTATCAGTTCTGCAGGGTCTGAGAGAGGAAGCACAGAGATCTTGAAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR TCA 90 bp | TCTTACAAGCATAAATCCGGAATATGCAAAGGGTGTACTTCAGCATaGTTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTG | + |
Preference number: 1 (lower is better) Translates to: SYKHKSGICKGCTSA*LQCRENRGQVYTFV Trigger: CACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATCATGCTGAAGTACACCCTTTGCATATTCCGGATTTATGCTTGTAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR GCA 90 bp | TCTAACAGGGACAGGCTACACCTGACAGATCAGCCCCTTTCACTGCCGCCTTCTCTTTCAAGATCTCTGTaGTTCCTCTCTCAGACCCTG | + |
Preference number: 2 (lower is better) Translates to: SNRDRLHLTDQPLSLPPSLSRSL*FLSQTL Trigger: CAGGGTCTGAGAGAGGAAGCACAGAGATCTTGAAAG...AGAAGGCGGCAGTGAAAGGGGCTGATCTGTCAGGTGTAGCCTGTCCCTGTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR GCA 90 bp | AACAGGGACAGGCTACACCTGACAGATCAGCCCCTTTCACTGCCGCCTTCTCTTCTTATCAGCAGTGGCTaGATCCCAAACTATAACCCA | + |
Preference number: 2 (lower is better) Translates to: NRDRLHLTDQPLSLPPSLLISSG*IPNYNP Trigger: TGGGTTATAGTTTGGGATGCAGCCACTGCTGATAAG...AAGAGAAGGCGGCAGTGAAAGGGGCTGATCTGTCAGGTGTAGCCTGTCCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR TCA 90 bp | CAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACGGGACAGGCTACACCTaGCAGATCAGCCCCTTTCAC | + |
Preference number: 2 (lower is better) Translates to: QLIQFVSTALRSSLNSVDGTGYT*QISPFH Trigger: GTGAAAGGGGCTGATCTGTCAGGTGTAGCCTGTCCC...GTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR CAA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATaGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGG | + |
Preference number: 2 (lower is better) Translates to: SVFPLLQFLASVNKL*SHDQCWPQRSTQAW Trigger: CCATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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3UTR CAA 90 bp | CCCAAAGGAAAATGTACACGTGCTGGGTGGGTTTTCAGAGTCCAGTaGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGC | + |
Preference number: 2 (lower is better) Translates to: PKGKCTRAGWVFRVQ*IQFVSTALRSSLNS Trigger: GCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTTTCCTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR TCA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCACAGACCCTGCAGAACTaGTACTCCTGGGCCATCCAT | + |
Preference number: 2 (lower is better) Translates to: MSRKQRSGLHICVTVIYPQTLQN*YSWAIH Trigger: ATGGATGGCCCAGGAGTATCAGTTCTGCAGGGTCTG...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR TCA 90 bp | ACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCCACAGCACTAATAATTTACTGTCCTaGAGACCTGAGCCTGACTTC | + |
Preference number: 2 (lower is better) Translates to: TCWVGFQSPVDPVCFHSTNNLLS*RPEPDF Trigger: GAAGTCAGGCTCAGGTCTTCAGGACAGTAAATTATT...AGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR GCA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTTTGTCTCACGACCAGTaGTGGCCACAGAGAAGCACT | + |
Preference number: 2 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCLSHDQ*WPQRST Trigger: AGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAA...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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3UTR-3UTR GCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCTTGTCTCACGACCAGTaGTGGCCACAGAGAAGCACT | + |
Preference number: 2 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFLSHDQ*WPQRST Trigger: AGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAA...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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3UTR-3UTR CCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTTCTCACGACCAGTGCTaGCCACAGAGAAGCACTCAG | + |
Preference number: 2 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVSHDQC*PQRSTQ Trigger: CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGA...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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3UTR-3UTR CCA 90 bp | AGTCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTGCATCCCAAACTATATCTCACGACCAGTGCTaGCCACAGAGAAGCACTCAG | + |
Preference number: 2 (lower is better) Translates to: SLITAVFSLSAVAASQTISHDQC*PQRSTQ Trigger: CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGA...TATAGTTTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR CAA 90 bp | CAGCATGATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTaGTGTCACTGTGATTTACCCAAAGGAAAATGTACACGTGCTGGG | + |
Preference number: 2 (lower is better) Translates to: QHDYNVEKTEVRFTH*CHCDLPKGKCTRAG Trigger: CCCAGCACGTGTACATTTTCCTTTGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATCATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR GCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACCATACAAATGATGTTTaGCGCCATTGCTTGTTTAAG | + |
Preference number: 2 (lower is better) Translates to: PVVISFCRKNMSNRDRLHHTNDV*RHCLFK Trigger: CTTAAACAAGCAATGGCGGCAAACATCATTTGTATG...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR GCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATCATACAAATGATGTTTaGCGCCATTGCTTGTTTAAG | + |
Preference number: 2 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDHTNDV*RHCLFK Trigger: CTTAAACAAGCAATGGCGGCAAACATCATTTGTATG...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR TCA 72 bp | AGATCTCTGTGCTTCCTCTCTCAGACCCTGCAGAACTaGTACTCCTGGGCCATCCATGTAAGCCACACTGAG | + |
Preference number: 3 (lower is better) Translates to: RSLCFLSQTLQN*YSWAIHVSHTE Trigger: CTCAGTGTGGCTTACATGGATGGCCCAGGAGTATCAGTTCTGCAGGGTCTGAGAGAGGAAGCACAGAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR TCA 72 bp | GTAGGAAGAACATGTCTAACAGGGACAGGCTACACCTaGCAGATCAGCCCCTTTCACTGCCGCCTTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: VGRTCLTGTGYT*QISPFHCRLLF Trigger: AAAGAGAAGGCGGCAGTGAAAGGGGCTGATCTGTCAGGTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR GCA 72 bp | TTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTaGTGGCCACAGAGAAGCACTCAGGCATGGGTCTGG | + |
Preference number: 3 (lower is better) Translates to: LASVNKLLSHDQ*WPQRSTQAWVW Trigger: CCAGACCCATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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3UTR CCA 72 bp | TGTGATTTACCCAAAGGAAAATGTACACGTGCTGGGTaGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCC | + |
Preference number: 3 (lower is better) Translates to: CDLPKGKCTRAG*VFRVQLIQFVS Trigger: GGAAACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTTTCCTTTGGGTAAATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR TCA 72 bp | GAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTaGTTTACCCAAAGGAAAATGTACACGTGCTGGGTG | + |
Preference number: 3 (lower is better) Translates to: ENRGQVYTFVSL*FTQRKMYTCWV Trigger: CACCCAGCACGTGTACATTTTCCTTTGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR-3UTR CAA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCAGTTTTCAGAGTCCAGTaGATCCAGTTTGTTTCCACA | + |
Preference number: 3 (lower is better) Translates to: MSRKQRSGLHICVTVIYPVFRVQ*IQFVST Trigger: TGTGGAAACAAACTGGATCAACTGGACTCTGAAAAC...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR GCA 72 bp | TCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTaGATCCCAAACTATAACCCACACAAACAGAAACTC | + |
Preference number: 3 (lower is better) Translates to: SNNSSIFLISSG*IPNYNPHKQKL Trigger: GAGTTTCTGTTTGTGTGGGTTATAGTTTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR TCA 72 bp | TTAAGCTATCTAAGTAGAACAAATAATTTACTGTCCTaGAGACCTGAGCCTGACTTCAGGAACTTTCAAGAT | + |
Preference number: 3 (lower is better) Translates to: LSYLSRTNNLLS*RPEPDFRNFQD Trigger: ATCTTGAAAGTTCCTGAAGTCAGGCTCAGGTCTTCAGGACAGTAAATTATTTGTTCTACTTAGATAGCTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AACAGGGACAGGCTACACCTGACAGATCAGCCCCTTTCACTGCCGCCTTCTCTTTCTGCAGAGCAACACTaGAGCTCTTCTGCTGTTGTG | + |
Preference number: 4 (lower is better) Translates to: NRDRLHLTDQPLSLPPSLSAEQH*SSSAVV Trigger: CACAACAGCAGAAGAGCTTCAGTGTTGCTCTGCAGA...AAGAGAAGGCGGCAGTGAAAGGGGCTGATCTGTCAGGTGTAGCCTGTCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACACGTGCTCCGGGACCGTaGCCAGAGCCTCGCAGCTCT | + |
Preference number: 4 (lower is better) Translates to: AIHVSHTEVKLEAKSLITRAPGP*PEPRSS Trigger: AGAGCTGCGAGGCTCTGGGCACGGTCCCGGAGCACG...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066439.8 |
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CDS-3UTR CCA 90 bp | TCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAGTCCCCTTGGAATCCTaGCACAGGCTCAGAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: SWAIHVSHTEVKLEAKSLVPLES*HRLRAG Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAAGGGGAC...TAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGACTTGCTCTCCCATCTaGCTCAGCCATGGTCCAGTC | + |
Preference number: 4 (lower is better) Translates to: KQVIVSRPVLATEKHSGMTCSPI*LSHGPV Trigger: GACTGGACCATGGCTGAGTCAGATGGGAGAGCAAGT...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AACAGGGACAGGCTACACCTGACAGATCAGCCCCTTTCACTGCCGCCTTCTCTTTCTGCATTAAGGATGTaGACAGATGTTGGCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: NRDRLHLTDQPLSLPPSLSALRM*TDVGRL Trigger: CAGCCTGCCAACATCTGTCCACATCCTTAATGCAGA...AAGAGAAGGCGGCAGTGAAAGGGGCTGATCTGTCAGGTGTAGCCTGTCCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACGTCCCCTTGGAATCCTaGCACAGGCTCAGAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: PVVISFCRKNMSNRDRLHVPLES*HRLRAG Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAAGGGGAC...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | TCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTATGCAGGGTGTCCCCTTaGAATCCTGGCACAGGCTCA | + |
Preference number: 4 (lower is better) Translates to: SWAIHVSHTEVKLEAKSLCRVSP*NPGTGS Trigger: TGAGCCTGTGCCAGGATTCCAAGGGGACACCCTGCA...TAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GGAAAATGTACACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTAGAAGCGGTACTGGCTaGCCCGGGGAAAGTACACAT | + |
Preference number: 4 (lower is better) Translates to: GKCTRAGWVFRVQLIQFVRSGTG*PGESTH Trigger: ATGTGTACTTTCCCCGGGTCAGCCAGTACCGCTTCT...AACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | TCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGTCAGTGCAGTAAGATaGGTGAGCTCTGAGGACAGC | + |
Preference number: 4 (lower is better) Translates to: SVNKLLSHDQCWPQRSTQVSAVR*VSSEDS Trigger: GCTGTCCTCAGAGCTCACTCATCTTACTGCACTGAC...CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACACTTGCTCTCCCATCTaGCTCAGCCATGGTCCAGTC | + |
Preference number: 4 (lower is better) Translates to: PVVISFCRKNMSNRDRLHTCSPI*LSHGPV Trigger: GACTGGACCATGGCTGAGTCAGATGGGAGAGCAAGT...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCCGTGCTCCGGGACCGTaGCCAGAGCCTCGCAGCTCT | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVRAPGP*PEPRSS Trigger: AGAGCTGCGAGGCTCTGGGCACGGTCCCGGAGCACG...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 |
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CDS-3UTR GCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTTGCAAGATCCGCTCGTaGTCCGGGACCGTGCCCAGA | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVCKIRS*SGTVPR Trigger: TCTGGGCACGGTCCCGGAGCACGAGCGGATCTTGCA...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 |
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CDS-3UTR GCA 90 bp | GTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGCGCAGGCGGTGTCGGTaGTTTCGATCTCCTGCAAGA | + |
Preference number: 4 (lower is better) Translates to: VFRVQLIQFVSTALRSSLRRRCR*FRSPAR Trigger: TCTTGCAGGAGATCGAAAGCACCGACACCGCCTGCG...CAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066439.8 |
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CDS-3UTR GCA 90 bp | TCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGACATCGAGGTTAAACTaGTGCACGGCTCCCATGCTG | + |
Preference number: 4 (lower is better) Translates to: SVNKLLSHDQCWPQRSTQTSRLN*CTAPML Trigger: CAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGT...CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCGTCCCCTTGGAATCCTaGCACAGGCTCAGAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFVPLES*HRLRAG Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAAGGGGAC...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | TCTAACAGGGACAGGCTACACCTGACAGATCAGCCCCTTTCACTGCCGCCTTCTCTGCAAAAATTACGATaGGATTCTTCAGCTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: SNRDRLHLTDQPLSLPPSLQKLR*DSSAPE Trigger: TTCTGGAGCTGAAGAATCTCATCGTAATTTTTGCAG...AGAAGGCGGCAGTGAAAGGGGCTGATCTGTCAGGTGTAGCCTGTCCCTGTTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACACAGATGTTGGCAGGCTaGCATGCAAGCTGTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: AIHVSHTEVKLEAKSLITQMLAG*HASCLG Trigger: GCCCAGACAGCTTGCATGTCAGCCTGCCAACATCTG...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTGCAAGATCCGCTCGTaGTCCGGGACCGTGCCCAGA | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDCKIRS*SGTVPR Trigger: TCTGGGCACGGTCCCGGAGCACGAGCGGATCTTGCA...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066439.8 |
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CDS-3UTR GCA 90 bp | TCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGTTCTGCTGTTGTGCCTaGTTCATGGCTGCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: SVNKLLSHDQCWPQRSTQFCCCA*FMAASP Trigger: AGGTGAAGCAGCCATGAAGCAGGCACAACAGCAGAA...CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTATTCTGCTGTTGTGCCTaGTTCATGGCTGCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: SWAIHVSHTEVKLEAKSLFCCCA*FMAASP Trigger: AGGTGAAGCAGCCATGAAGCAGGCACAACAGCAGAA...TAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTACAAGGTCAGGGTCAGTaGAGTAAGATGAGTGAGCTC | + |
Preference number: 4 (lower is better) Translates to: SWAIHVSHTEVKLEAKSLQGQGQ*SKMSEL Trigger: GAGCTCACTCATCTTACTGCACTGACCCTGACCTTG...TAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACACATCGAGGTTAAACTaGTGCACGGCTCCCATGCTG | + |
Preference number: 4 (lower is better) Translates to: PVVISFCRKNMSNRDRLHTSRLN*CTAPML Trigger: CAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGT...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGCCTCAGTGTAGACCCTaGTTACTAATCCTTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: KQVIVSRPVLATEKHSGMPQCRP*LLILGS Trigger: TGACCCAAGGATTAGTAACCAGGGTCTACACTGAGG...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGTCTGCATTAAGGATGTaGACAGATGTTGGCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: KQVIVSRPVLATEKHSGMSALRM*TDVGRL Trigger: CAGCCTGCCAACATCTGTCCACATCCTTAATGCAGA...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGCAGGGTGTCCCCTTaGAATCCTGGCACAGGCTCA | + |
Preference number: 4 (lower is better) Translates to: PLLQFLASVNKLLSHDQCCRVSP*NPGTGS Trigger: TGAGCCTGTGCCAGGATTCCAAGGGGACACCCTGCA...GCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | TTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCTGTCACTCGGAGGTACTTaGAAGCCGGCTGCCCATAGT | + |
Preference number: 4 (lower is better) Translates to: LIQFVSTALRSSLNSVDLSLGGT*KPAAHS Trigger: ACTATGGGCAGCCGGCTTCCAAGTACCTCCGAGTGA...CAGGTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | ACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCCACAGCACTTCTTTTCCTGCATCTTaGAACCTTCGGTTGGTATCG | + |
Preference number: 4 (lower is better) Translates to: TCWVGFQSPVDPVCFHSTSFPAS*NLRLVS Trigger: CGATACCAACCGAAGGTTTCAAGATGCAGGAAAAGA...AGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGCAGCAGCAGATTGGTTaGTTTCCTAAGCATGTCATC | + |
Preference number: 4 (lower is better) Translates to: KQVIVSRPVLATEKHSGMQQQIG*FPKHVI Trigger: GATGACATGCTTAGGAAATCAACCAATCTGCTGCTG...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | TTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCTGGCACGGCTCCCATGCTaGTCTGCTTTAACTCACTGT | + |
Preference number: 4 (lower is better) Translates to: LIQFVSTALRSSLNSVDLARLPC*SALTHC Trigger: ACAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGC...CAGGTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCAGAACCAGGCGTGCCTaGTTCTTCCTTTGCTTCCGG | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFRTRRA*FFLCFR Trigger: CCGGAAGCAAAGGAAGAAGCAGGCACGCCTGGTTCT...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | ACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCCACAGCACTAGTCCTCTAGGTATTTaGAAGCTTGTTCCAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: TCWVGFQSPVDPVCFHSTSPLGI*KLVPGV Trigger: CACACCTGGAACAAGCTTGCAAATACCTAGAGGACT...AGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACATCACTCGGAGGTACTTaGAAGCCGGCTGCCCATAGT | + |
Preference number: 4 (lower is better) Translates to: AIHVSHTEVKLEAKSLITSLGGT*KPAAHS Trigger: ACTATGGGCAGCCGGCTTCCAAGTACCTCCGAGTGA...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTCACTCGGAGGTACTTaGAAGCCGGCTGCCCATAGT | + |
Preference number: 4 (lower is better) Translates to: PLLQFLASVNKLLSHDQCSLGGT*KPAAHS Trigger: ACTATGGGCAGCCGGCTTCCAAGTACCTCCGAGTGA...GCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGTCCACAAAGCCCTGGTaGTGGAAGTTACACATTTTT | + |
Preference number: 4 (lower is better) Translates to: KQVIVSRPVLATEKHSGMSTKPW*WKLHIF Trigger: AAAAATGTGTAACTTCCATCACCAGGGCTTTGTGGA...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAAGAAGCGGTACTGGCTaGCCCGGGGAAAGTACACAT | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLRSGTG*PGESTH Trigger: ATGTGTACTTTCCCCGGGTCAGCCAGTACCGCTTCT...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCGTCAGTGCAGTAAGATaGGTGAGCTCTGAGGACAGC | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFVSAVR*VSSEDS Trigger: GCTGTCCTCAGAGCTCACTCATCTTACTGCACTGAC...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTGTCAGTGCAGTAAGATaGGTGAGCTCTGAGGACAGC | + |
Preference number: 4 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCVSAVR*VSSEDS Trigger: GCTGTCCTCAGAGCTCACTCATCTTACTGCACTGAC...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | TCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTACAGCAGCAGATTGGTTaGTTTCCTAAGCATGTCATC | + |
Preference number: 4 (lower is better) Translates to: SWAIHVSHTEVKLEAKSLQQQIG*FPKHVI Trigger: GATGACATGCTTAGGAAATCAACCAATCTGCTGCTG...TAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGATGTTGGCAGGCTaGCATGCAAGCTGTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDQMLAG*HASCLG Trigger: GCCCAGACAGCTTGCATGTCAGCCTGCCAACATCTG...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATCAGATGTTGGCAGGCTaGCATGCAAGCTGTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDQMLAG*HASCLG Trigger: GCCCAGACAGCTTGCATGTCAGCCTGCCAACATCTG...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTACAGTCACCAAGCCTCTaGGCTGTCTCACCACTGTCT | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLQSPSL*AVSPLS Trigger: AGACAGTGGTGAGACAGCTCAGAGGCTTGGTGACTG...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTGCTCTTCTGCTGTTGTaGCTGCTTCATGGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCALLLL*LLHGCF Trigger: GAAGCAGCCATGAAGCAGGCACAACAGCAGAAGAGC...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCAAGAACCAGGCGTGCCTaGTTCTTCCTTTGCTTCCGG | + |
Preference number: 4 (lower is better) Translates to: MSRKQRSGLHICVTVIYPRTRRA*FFLCFR Trigger: CCGGAAGCAAAGGAAGAAGCAGGCACGCCTGGTTCT...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCTCGAGGTTAAACTGCTaGACGGCTCCCATGCTGATC | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFSRLNC*TAPMLI Trigger: GATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGA...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACCATCTGACTCAGCCATaGTCCAGTCATAATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: PVVISFCRKNMSNRDRLHHLTQP*SSHNQP Trigger: TGGCTGATTATGACTGGACCATGGCTGAGTCAGATG...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACGACATGCAAGCTGTCTaGGCAACTTTCCCAGGCAAA | + |
Preference number: 4 (lower is better) Translates to: QLIQFVSTALRSSLNSVDDMQAV*ATFPGK Trigger: TTTGCCTGGGAAAGTTGCCCAGACAGCTTGCATGTC...GTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGGATGTGGACAGATGTTaGCAGGCTGACATGCAAGCT | + |
Preference number: 4 (lower is better) Translates to: VFRVQLIQFVSTALRSSLDVDRC*QADMQA Trigger: AGCTTGCATGTCAGCCTGCCAACATCTGTCCACATC...CAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTGCAGGGTGTCCCCTTaGAATCCTGGCACAGGCTCA | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDCRVSP*NPGTGS Trigger: TGAGCCTGTGCCAGGATTCCAAGGGGACACCCTGCA...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACGGTTCCGCACACCCCTaGCTTCCCAGCTGTAGACAT | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDGSAHP*LPSCRH Trigger: ATGTCTACAGCTGGGAAGCCAGGGGTGTGCGGAACC...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | TTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCTGTTGTGTGCGTTTGGCTaGTCATCATACACAGATCGG | + |
Preference number: 4 (lower is better) Translates to: LIQFVSTALRSSLNSVDLLCAFG*SSYTDR Trigger: CCGATCTGTGTATGATGATCAGCCAAACGCACACAA...CAGGTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066439.8 |
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CDS-3UTR TCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACTCTTTTCCTGCATCTTaGAACCTTCGGTTGGTATCG | + |
Preference number: 4 (lower is better) Translates to: PVVISFCRKNMSNRDRLHSFPAS*NLRLVS Trigger: CGATACCAACCGAAGGTTTCAAGATGCAGGAAAAGA...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGGTCACGTGTAAAATGTaGTCTTCCACAACAAAGAAC | + |
Preference number: 4 (lower is better) Translates to: KQVIVSRPVLATEKHSGMVTCKM*SSTTKN Trigger: GTTCTTTGTTGTGGAAGATCACATTTTACACGTGAC...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AGTCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTGCATCCCAAACTATAACTTGCTCTCCCATCTaGCTCAGCCATGGTCCAGTC | + |
Preference number: 4 (lower is better) Translates to: SLITAVFSLSAVAASQTITCSPI*LSHGPV Trigger: GACTGGACCATGGCTGAGTCAGATGGGAGAGCAAGT...TATAGTTTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAGCACGGCTCCCATGCTaGTCTGCTTTAACTCACTGT | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLARLPC*SALTHC Trigger: ACAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGC...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTCACCAAGCCTCTaGGCTGTCTCACCACTGTCT | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDQSPSL*AVSPLS Trigger: AGACAGTGGTGAGACAGCTCAGAGGCTTGGTGACTG...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATCAGTCACCAAGCCTCTaGGCTGTCTCACCACTGTCT | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDQSPSL*AVSPLS Trigger: AGACAGTGGTGAGACAGCTCAGAGGCTTGGTGACTG...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCGGCAGCTCAAAAGACTaGATCTCCGCTAGGACATTC | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFGSSKD*ISARTF Trigger: GAATGTCCTAGCGGAGATTCAGTCTTTTGAGCTGCC...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATATATTTCTCCTTCTaGCGCATGTCGAGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: SWAIHVSHTEVKLEAKSLIYFSF*RMSSIL Trigger: AAGGATGCTCGACATGCGGCAGAAGGAGAAATATAT...TAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGATATATTTCTCCTTCTaGCGCATGTCGAGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: SVNKLLSHDQCWPQRSTQIYFSF*RMSSIL Trigger: AAGGATGCTCGACATGCGGCAGAAGGAGAAATATAT...CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCATCGAGGTTAAACTGCTaGACGGCTCCCATGCTGATC | + |
Preference number: 4 (lower is better) Translates to: MSRKQRSGLHICVTVIYPSRLNC*TAPMLI Trigger: GATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGA...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTACATCGAGGTTAAACTaGTGCACGGCTCCCATGCTG | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVTSRLN*CTAPML Trigger: CAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGT...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACGTTGTGCCTGCTTCATaGCTGCTTCACCTATTTTGT | + |
Preference number: 4 (lower is better) Translates to: PVVISFCRKNMSNRDRLHVVPAS*LLHLFC Trigger: ACAAAATAGGTGAAGCAGCCATGAAGCAGGCACAAC...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCCTCAGTGTAGACCCTaGTTACTAATCCTTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: QLIQFVSTALRSSLNSVDPQCRP*LLILGS Trigger: TGACCCAAGGATTAGTAACCAGGGTCTACACTGAGG...GTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCATCTGACTCAGCCATaGTCCAGTCATAATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: QLIQFVSTALRSSLNSVDHLTQP*SSHNQP Trigger: TGGCTGATTATGACTGGACCATGGCTGAGTCAGATG...GTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCGACATGCAAGCTGTCTaGGCAACTTTCCCAGGCAAA | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFDMQAV*ATFPGK Trigger: TTTGCCTGGGAAAGTTGCCCAGACAGCTTGCATGTC...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCAGCACAGGCTCAGAGCTaGCAAACAGTTCGCACTGTA | + |
Preference number: 4 (lower is better) Translates to: MSRKQRSGLHICVTVIYPAQAQS*QTVRTV Trigger: TACAGTGCGAACTGTTTGCCAGCTCTGAGCCTGTGC...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR CAA 72 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATaGTCTCACGACCAGTGCTGGCCACAGAGAAGCACT | + |
Preference number: 4 (lower is better) Translates to: PLLQFLASVNKL*SHDQCWPQRST Trigger: AGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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3UTR CAA 72 bp | AAATGTACACGTGCTGGGTGGGTTTTCAGAGTCCAGTaGATCCAGTTTGTTTCCACAGCACTGAGATCTTCT | + |
Preference number: 4 (lower is better) Translates to: KCTRAGWVFRVQ*IQFVSTALRSS Trigger: AGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTTTGTGTGCGTTTGGCTaGTCATCATACACAGATCGG | + |
Preference number: 4 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCLCAFG*SSYTDR Trigger: CCGATCTGTGTATGATGATCAGCCAAACGCACACAA...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 |
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CDS-3UTR TCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTTCTGCAGAGCAACACTaGAGCTCTTCTGCTGTTGTG | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVSAEQH*SSSAVV Trigger: CACAACAGCAGAAGAGCTTCAGTGTTGCTCTGCAGA...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GGAAAATGTACACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTCTTCAAAAATGTCCCTaGAAATACCAGCCCACTTCT | + |
Preference number: 4 (lower is better) Translates to: GKCTRAGWVFRVQLIQFVLQKCP*KYQPTS Trigger: AGAAGTGGGCTGGTATTTTCAGGGACATTTTTGAAG...AACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | TTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCTGCAGCAGCAGATTGGTTaGTTTCCTAAGCATGTCATC | + |
Preference number: 4 (lower is better) Translates to: LIQFVSTALRSSLNSVDLQQQIG*FPKHVI Trigger: GATGACATGCTTAGGAAATCAACCAATCTGCTGCTG...CAGGTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AGTCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTGCATCCCAAACTATAGCACGGCTCCCATGCTaGTCTGCTTTAACTCACTGT | + |
Preference number: 4 (lower is better) Translates to: SLITAVFSLSAVAASQTIARLPC*SALTHC Trigger: ACAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGC...TATAGTTTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GGAAAATGTACACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTTTTCCTTGTCATGATTaGGGATACAAGCGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: GKCTRAGWVFRVQLIQFVFPCHD*GYKRLA Trigger: AGCTAGACGCTTGTATCCGCAATCATGACAAGGAAA...AACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATGCTCTTCTGCTGTTGTaGCTGCTTCATGGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDALLLL*LLHGCF Trigger: GAAGCAGCCATGAAGCAGGCACAACAGCAGAAGAGC...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | ACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCCACAGCACTATATTATTTTGCTTCTaGAGAGCAACACTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: TCWVGFQSPVDPVCFHSTILFCF*RATLKL Trigger: GAGCTTCAGTGTTGCTCTGCAGAAGCAAAATAATAT...AGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACAGAACCAGGCGTGCCTaGTTCTTCCTTTGCTTCCGG | + |
Preference number: 4 (lower is better) Translates to: SVFPLLQFLASVNKLLSHRTRRA*FFLCFR Trigger: CCGGAAGCAAAGGAAGAAGCAGGCACGCCTGGTTCT...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTACAAGGTCAGGGTCAGTaGAGTAAGATGAGTGAGCTC | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLQGQGQ*SKMSEL Trigger: GAGCTCACTCATCTTACTGCACTGACCCTGACCTTG...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGCAAGGTCAGGGTCAGTaGAGTAAGATGAGTGAGCTC | + |
Preference number: 4 (lower is better) Translates to: STTVFGFCKQVIVSRPVLQGQGQ*SKMSEL Trigger: GAGCTCACTCATCTTACTGCACTGACCCTGACCTTG...CAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACAGCTCCCATGCTGATCTaGTTTAACTCACTGTCCAGT | + |
Preference number: 4 (lower is better) Translates to: AIHVSHTEVKLEAKSLITAPMLI*FNSLSS Trigger: ACTGGACAGTGAGTTAAAGCAGATCAGCATGGGAGC...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTCGAGGTTAAACTGCTaGACGGCTCCCATGCTGATC | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDSRLNC*TAPMLI Trigger: GATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGA...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCAGATGTGGACAGATGTTaGCAGGCTGACATGCAAGCT | + |
Preference number: 4 (lower is better) Translates to: MSRKQRSGLHICVTVIYPDVDRC*QADMQA Trigger: AGCTTGCATGTCAGCCTGCCAACATCTGTCCACATC...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACGCACAGGCTCAGAGCTaGCAAACAGTTCGCACTGTA | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDAQAQS*QTVRTV Trigger: TACAGTGCGAACTGTTTGCCAGCTCTGAGCCTGTGC...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATGCACAGGCTCAGAGCTaGCAAACAGTTCGCACTGTA | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDAQAQS*QTVRTV Trigger: TACAGTGCGAACTGTTTGCCAGCTCTGAGCCTGTGC...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACTTTCCAGAAAGTCCTTaGGATCAGACATGGAGATGT | + |
Preference number: 4 (lower is better) Translates to: QLIQFVSTALRSSLNSVDFPESP*DQTWRC Trigger: ACATCTCCATGTCTGATCTCAAGGACTTTCTGGAAA...GTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACTCTGCAGAGCAACACTaGAGCTCTTCTGCTGTTGTG | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDSAEQH*SSSAVV Trigger: CACAACAGCAGAAGAGCTTCAGTGTTGCTCTGCAGA...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACCTGCAAAAATTACGATaGGATTCTTCAGCTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: PVVISFCRKNMSNRDRLHLQKLR*DSSAPE Trigger: TTCTGGAGCTGAAGAATCTCATCGTAATTTTTGCAG...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TCCTGGGCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAAGTAATACCTTTTCATaGTCATCTGTTCCTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: SWAIHVSHTEVKLEAKSLSNTFS*SSVPSA Trigger: AGCTGAAGGAACAGATGAGCATGAAAAGGTATTACT...TAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGCCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGCCTGCTTCATGGCTaGTTCACCTATTTTGTCAGA | + |
Preference number: 4 (lower is better) Translates to: PLLQFLASVNKLLSHDQCCLLHG*FTYFVR Trigger: TCTGACAAAATAGGTGAAGCAGCCATGAAGCAGGCA...GCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACTTCTGCTGTTGTGCCTaGTTCATGGCTGCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDFCCCA*FMAASP Trigger: AGGTGAAGCAGCCATGAAGCAGGCACAACAGCAGAA...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCCTGTCCAGTAGCATCTaGATTAAGGATGTGGACAGA | + |
Preference number: 4 (lower is better) Translates to: PLLQFLASVNKLLSHDQCLSSSI*IKDVDR Trigger: TCTGTCCACATCCTTAATGCAGATGCTACTGGACAG...GCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACACTGTCCAGTAGCATCTaGATTAAGGATGTGGACAGA | + |
Preference number: 4 (lower is better) Translates to: AIHVSHTEVKLEAKSLITLSSSI*IKDVDR Trigger: TCTGTCCACATCCTTAATGCAGATGCTACTGGACAG...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAGCTCCCATGCTGATCTaGTTTAACTCACTGTCCAGT | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLAPMLI*FNSLSS Trigger: ACTGGACAGTGAGTTAAAGCAGATCAGCATGGGAGC...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACAGTTGTGCCTGCTTCATaGCTGCTTCACCTATTTTGT | + |
Preference number: 4 (lower is better) Translates to: AIHVSHTEVKLEAKSLITVVPAS*LLHLFC Trigger: ACAAAATAGGTGAAGCAGCCATGAAGCAGGCACAAC...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATGACATGCAAGCTGTCTaGGCAACTTTCCCAGGCAAA | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDDMQAV*ATFPGK Trigger: TTTGCCTGGGAAAGTTGCCCAGACAGCTTGCATGTC...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATCTGCATTAAGGATGTaGACAGATGTTGGCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLSALRM*TDVGRL Trigger: CAGCCTGCCAACATCTGTCCACATCCTTAATGCAGA...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTCAATTTCCTTGTCATaGTTGCGGATACAAGCGTCT | + |
Preference number: 4 (lower is better) Translates to: PLLQFLASVNKLLSHDQCSISLS*LRIQAS Trigger: AGACGCTTGTATCCGCAATCATGACAAGGAAATTGA...GCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTCCACAAAGCCCTGGTaGTGGAAGTTACACATTTTT | + |
Preference number: 4 (lower is better) Translates to: PLLQFLASVNKLLSHDQCSTKPW*WKLHIF Trigger: AAAAATGTGTAACTTCCATCACCAGGGCTTTGTGGA...GCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTTTTCCTTGTCATGATTaGGGATACAAGCGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCFPCHD*GYKRLA Trigger: AGCTAGACGCTTGTATCCGCAATCATGACAAGGAAA...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCTTTCCTTGTCATGATTaGGGATACAAGCGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFFPCHD*GYKRLA Trigger: AGCTAGACGCTTGTATCCGCAATCATGACAAGGAAA...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTTTGGTATCGGTAACCTaGACCTTCAGTTTTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVLVSVT*TFSFSA Trigger: TGCGGAAAAACTGAAGGTGCAGGTTACCGATACCAA...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGGTATCGGTAACCTaGACCTTCAGTTTTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLLVSVT*TFSFSA Trigger: TGCGGAAAAACTGAAGGTGCAGGTTACCGATACCAA...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTTGCCTGCTTCATGGCTaGTTCACCTATTTTGTCAGA | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVCLLHG*FTYFVR Trigger: TCTGACAAAATAGGTGAAGCAGCCATGAAGCAGGCA...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAGTCCTCTAGGTATTTaGAAGCTTGTTCCAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVSPLGI*KLVPGV Trigger: CACACCTGGAACAAGCTTGCAAATACCTAGAGGACT...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | TCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGTTGTGCCTGCTTCATaGCTGCTTCACCTATTTTGT | + |
Preference number: 4 (lower is better) Translates to: STTVFGFCKQVIVSRPVLVVPAS*LLHLFC Trigger: ACAAAATAGGTGAAGCAGCCATGAAGCAGGCACAAC...CAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCGATGTGGACAGATGTTaGCAGGCTGACATGCAAGCT | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVDVDRC*QADMQA Trigger: AGCTTGCATGTCAGCCTGCCAACATCTGTCCACATC...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
||
CDS-3UTR TCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTTCAATTTCCTTGTCATaGTTGCGGATACAAGCGTCT | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVSISLS*LRIQAS Trigger: AGACGCTTGTATCCGCAATCATGACAAGGAAATTGA...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
||
CDS-3UTR TCA 90 bp | TCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGTTTCCAGAAAGTCCTTaGGATCAGACATGGAGATGT | + |
Preference number: 4 (lower is better) Translates to: STTVFGFCKQVIVSRPVLFPESP*DQTWRC Trigger: ACATCTCCATGTCTGATCTCAAGGACTTTCTGGAAA...CAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTGTCACGTGTAAAATGTaGTCTTCCACAACAAAGAAC | + |
Preference number: 4 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCVTCKM*SSTTKN Trigger: GTTCTTTGTTGTGGAAGATCACATTTTACACGTGAC...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCCTGCAAAAATTACGATaGGATTCTTCAGCTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFLQKLR*DSSAPE Trigger: TTCTGGAGCTGAAGAATCTCATCGTAATTTTTGCAG...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCTGAGTAATACCTTTTCATaGTCATCTGTTCCTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: LIQFVSTALRSSLNSVDLSNTFS*SSVPSA Trigger: AGCTGAAGGAACAGATGAGCATGAAAAGGTATTACT...CAGGTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTCCTATTTTGTCAGAATaGTTTCGGATGCTTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCPILSE*FRMLSR Trigger: TCTGGAAAGCATCCGAAAGCATTCTGACAAAATAGG...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGTCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTGCATCCCAAACTATATGCCTGCTTCATGGCTaGTTCACCTATTTTGTCAGA | + |
Preference number: 4 (lower is better) Translates to: SLITAVFSLSAVAASQTICLLHG*FTYFVR Trigger: TCTGACAAAATAGGTGAAGCAGCCATGAAGCAGGCA...TATAGTTTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | TCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGTTCTTTGGGAAAGATTaGTTTTCGAGGTCTGGATCC | + |
Preference number: 4 (lower is better) Translates to: STTVFGFCKQVIVSRPVLFFGKD*FSRSGS Trigger: GGATCCAGACCTCGAAAAGCAATCTTTCCCAAAGAA...CAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GGAAAATGTACACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTATATGTTATTCTTCTTaGTGGTGTCCTTCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: GKCTRAGWVFRVQLIQFVICYSS*WCPSSS Trigger: AGAAGATGAAGGACACCAGCAAGAAGAATAACATAT...AACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
||
CDS-3UTR CCA 90 bp | CAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGAATAGCGTTGACCATAGGAAACTTCTTTaGGAAAGATTGCTTTTCGAG | + |
Preference number: 4 (lower is better) Translates to: QLIQFVSTALRSSLNSVDHRKLL*ERLLFE Trigger: CTCGAAAAGCAATCTTTCCCAAAGAAGTTTCCTATG...GTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTGTCCATAAAGTCTTGTaGTGTGAACGGTTTCTTGAG | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVVHKVL*CERFLE Trigger: CTCAAGAAACCGTTCACACCACAAGACTTTATGGAC...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACCATCTGACTCAGCCATaGTCCAGTCATAATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: SVFPLLQFLASVNKLLSHHLTQP*SSHNQP Trigger: TGGCTGATTATGACTGGACCATGGCTGAGTCAGATG...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
||
CDS-3UTR TCA 90 bp | AGCTCTTCACACTTATTTTACAGAGTCAGGTCATCTTACAAGCATAAATCCGGATCAATTTCCTTGTCATaGTTGCGGATACAAGCGTCT | + |
Preference number: 4 (lower is better) Translates to: SSSHLFYRVRSSYKHKSGSISLS*LRIQAS Trigger: AGACGCTTGTATCCGCAATCATGACAAGGAAATTGA...TCCGGATTTATGCTTGTAAGATGACCTGACTCTGTAAAATAAGTGTGAAGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACTCTTTTCCTGCATCTTaGAACCTTCGGTTGGTATCG | + |
Preference number: 4 (lower is better) Translates to: SVFPLLQFLASVNKLLSHSFPAS*NLRLVS Trigger: CGATACCAACCGAAGGTTTCAAGATGCAGGAAAAGA...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCTTCAAAAATGTCCCTaGAAATACCAGCCCACTTCT | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDLQKCP*KYQPTS Trigger: AGAAGTGGGCTGGTATTTTCAGGGACATTTTTGAAG...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AGTCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTGCATCCCAAACTATATTGTGTGCGTTTGGCTaGTCATCATACACAGATCTT | + |
Preference number: 4 (lower is better) Translates to: SLITAVFSLSAVAASQTILCAFG*SSYTDL Trigger: AAGATCTGTGTATGATGATCAGCCAAACGCACACAA...TATAGTTTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGCTCTTCACACTTATTTTACAGAGTCAGGTCATCTTACAAGCATAAATCCGGATTCTTTGGGAAAGATTaGTTTTCGAGGTCTGGATCC | + |
Preference number: 4 (lower is better) Translates to: SSSHLFYRVRSSYKHKSGFFGKD*FSRSGS Trigger: GGATCCAGACCTCGAAAAGCAATCTTTCCCAAAGAA...TCCGGATTTATGCTTGTAAGATGACCTGACTCTGTAAAATAAGTGTGAAGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCAGTCCTCTAGGTATTTaGAAGCTTGTTCCAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVSPLGI*KLVPGV Trigger: CACACCTGGAACAAGCTTGCAAATACCTAGAGGACT...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACCTGTCCAGTAGCATCTaGATTAAGGATGTGGACAGA | + |
Preference number: 4 (lower is better) Translates to: SVFPLLQFLASVNKLLSHLSSSI*IKDVDR Trigger: TCTGTCCACATCCTTAATGCAGATGCTACTGGACAG...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AGCTCTTCACACTTATTTTACAGAGTCAGGTCATCTTACAAGCATAAATCCGGAGTCCATAAAGTCTTGTaGTGTGAACGGTTTCTTGAG | + |
Preference number: 4 (lower is better) Translates to: SSSHLFYRVRSSYKHKSGVHKVL*CERFLE Trigger: CTCAAGAAACCGTTCACACCACAAGACTTTATGGAC...TCCGGATTTATGCTTGTAAGATGACCTGACTCTGTAAAATAAGTGTGAAGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCCACAAAGCCCTGGTaGTGGAAGTTACACATTTTT | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVSTKPW*WKLHIF Trigger: AAAAATGTGTAACTTCCATCACCAGGGCTTTGTGGA...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACTTTCCAGAAAGTCCTTaGGATCAGACATGGAGATGT | + |
Preference number: 4 (lower is better) Translates to: SVFPLLQFLASVNKLLSHFPESP*DQTWRC Trigger: ACATCTCCATGTCTGATCTCAAGGACTTTCTGGAAA...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCCTTCAAAAATGTCCCTaGAAATACCAGCCCACTTCT | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVLQKCP*KYQPTS Trigger: AGAAGTGGGCTGGTATTTTCAGGGACATTTTTGAAG...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCCTATTTTGTCAGAATaGTTTCGGATGCTTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: VFPLLQFLASVNKLLSHDPILSE*FRMLSR Trigger: TCTGGAAAGCATCCGAAAGCATTCTGACAAAATAGG...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAATATTATTTTGCTTCTaGAGAGCAACACTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLILFCF*RATLKL Trigger: GAGCTTCAGTGTTGCTCTGCAGAAGCAAAATAATAT...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATATTATTTTGCTTCTaGAGAGCAACACTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVILFCF*RATLKL Trigger: GAGCTTCAGTGTTGCTCTGCAGAAGCAAAATAATAT...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTTCTTTGGGAAAGATTaGTTTTCGAGGTCTGGATCC | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVFFGKD*FSRSGS Trigger: GGATCCAGACCTCGAAAAGCAATCTTTCCCAAAGAA...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCATATATTTCTCCTTCTaGCGCATGTCGAGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVIYFSF*RMSSIL Trigger: AAGGATGCTCGACATGCGGCAGAAGGAGAAATATAT...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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3UTR CAA 72 bp | TTAAAAATCCATACAAATGATGTTTGCCGCCATTGCTaGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTAC | + |
Preference number: 4 (lower is better) Translates to: LKIHTNDVCRHC*FKPSSVSFLYY Trigger: GTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATGGATTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR TCA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGTCACGTGTAAAATGTaGTCTTCCACAACAAAGAAC | + |
Preference number: 4 (lower is better) Translates to: SVFPLLQFLASVNKLLSHVTCKM*SSTTKN Trigger: GTTCTTTGTTGTGGAAGATCACATTTTACACGTGAC...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCCCTATTTTGTCAGAATaGTTTCGGATGCTTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVPILSE*FRMLSR Trigger: TCTGGAAAGCATCCGAAAGCATTCTGACAAAATAGG...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAATATGTTATTCTTCTTaGTGGTGTCCTTCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: ALISVFPLLQFLASVNKLICYSS*WCPSSS Trigger: AGAAGATGAAGGACACCAGCAAGAAGAATAACATAT...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AGCTCTTCACACTTATTTTACAGAGTCAGGTCATCTTACAAGCATAAATCCGGACATAGGAAACTTCTTTaGGAAAGATTGCTTTTCGAG | + |
Preference number: 4 (lower is better) Translates to: SSSHLFYRVRSSYKHKSGHRKLL*ERLLFE Trigger: CTCGAAAAGCAATCTTTCCCAAAGAAGTTTCCTATG...TCCGGATTTATGCTTGTAAGATGACCTGACTCTGTAAAATAAGTGTGAAGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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3UTR CAA 72 bp | TACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTaGTGTCACTGTGATTTACCCAAAGGAAAATGTACA | + |
Preference number: 4 (lower is better) Translates to: YNVEKTEVRFTH*CHCDLPKGKCT Trigger: TGTACATTTTCCTTTGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | CATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCAGTAATACCTTTTCATaGTCATCTGTTCCTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: HQCLSSTTVFGFCKQVIVSNTFS*SSVPSA Trigger: AGCTGAAGGAACAGATGAGCATGAAAAGGTATTACT...GACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR GCA 90 bp | GATTACAATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATATATGTTATTCTTCTTaGTGGTGTCCTTCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: DYNVEKTEVRFTHLCHCDICYSS*WCPSSS Trigger: AGAAGATGAAGGACACCAGCAAGAAGAATAACATAT...ATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACATTGTAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CCA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACCATAGGAAACTTCTTTaGGAAAGATTGCTTTTCGAG | + |
Preference number: 4 (lower is better) Translates to: SVFPLLQFLASVNKLLSHHRKLL*ERLLFE Trigger: CTCGAAAAGCAATCTTTCCCAAAGAAGTTTCCTATG...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 90 bp | ATTCTTCTTGCTGGTGTCCTTCATCTTCTCCAAAAGAGTGAGGGCTaGGTGTGGGTTCACTCGGAGGTACTTGGAAGCCGGCTGCCCATA | + |
Preference number: 5 (lower is better) Translates to: ILLAGVLHLLQKSEG*VWVHSEVLGSRLPI Trigger: TATGGGCAGCCGGCTTCCAAGTACCTCCGAGTGAACCCACACGCAGCCCTCACTCTTTTGGAGAAGATGAAGGACACCAGCAAGAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | CCTGTCGTGATTTCATTCTGTAGGAAGAACATGTCTAACAGGGACAGGCTACACCTGCAGGGTGTCCCCTaGGAATCCTGGCACAGGCTC | + |
Preference number: 5 (lower is better) Translates to: PVVISFCRKNMSNRDRLHLQGVP*ESWHRL Trigger: GAGCCTGTGCCAGGATTCCAAGGGGACACCCTGCAG...GTGTAGCCTGTCCCTGTTAGACATGTTCTTCCTACAGAATGAAATCACGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS CCA 90 bp | CGGAGTTTAGGGAGTGTCTCCATCATGAGCTGGCAGAAGCGGTACTaGCTGACCCGGGGAAAGTACACATTCTCTAGCTGTTCCATTGTT | + |
Preference number: 5 (lower is better) Translates to: RSLGSVSIMSWQKRY*LTRGKYTFSSCSIV Trigger: AACAATGGAACAGCTAGAGAATGTGTACTTTCCCCGGGTCAGCCAGTACCGCTTCTGCCAGCTCATGATGGAGACACTCCCTAAACTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 90 bp | TCTTTGATGTCTTCCCGGAGTTTAGGGAGTGTCTCCATCATGAGCTaGCAGAAGCGGTACTGGCTGACCCGGGGAAAGTACACATTCTCT | + |
Preference number: 5 (lower is better) Translates to: SLMSSRSLGSVSIMS*QKRYWLTRGKYTFS Trigger: AGAGAATGTGTACTTTCCCCGGGTCAGCCAGTACCGCTTCTGCCAGCTCATGATGGAGACACTCCCTAAACTCCGGGAAGACATCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGGAAGCTCTTCTGCTGTaGTGCCTGCTTCATGGCTGC | + |
Preference number: 5 (lower is better) Translates to: KQVIVSRPVLATEKHSGMEALLL*CLLHGC Trigger: GCAGCCATGAAGCAGGCACAACAGCAGAAGAGCTTC...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 90 bp | GAGCTGGCAAACAGTTCGCACTGTATGACATCGAGGTTAAACTGCTaGACGGCTCCCATGCTGATCTGCTTTAACTCACTGTCCAGTAGC | + |
Preference number: 5 (lower is better) Translates to: ELANSSHCMTSRLNC*TAPMLICFNSLSSS Trigger: GCTACTGGACAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGTCATACAGTGCGAACTGTTTGCCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACACTGCAGGGTGTCCCCTaGGAATCCTGGCACAGGCTC | + |
Preference number: 5 (lower is better) Translates to: AIHVSHTEVKLEAKSLITLQGVP*ESWHRL Trigger: GAGCCTGTGCCAGGATTCCAAGGGGACACCCTGCAG...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS GCA 90 bp | TCAGAGCTGGCAAACAGTTCGCACTGTATGACATCGAGGTTAAACTaGTGCACGGCTCCCATGCTGATCTGCTTTAACTCACTGTCCAGT | + |
Preference number: 5 (lower is better) Translates to: SELANSSHCMTSRLN*CTAPMLICFNSLSS Trigger: ACTGGACAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGTCATACAGTGCGAACTGTTTGCCAGCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
||
CDS GCA 90 bp | GTCAAAGAGCCGGTTGACTGGGAAGCCATAACCCTGCAGAGTGTCTaGAAAAATTACGATGAGATTCTTCAGCTCCAGAACAAGGTCAGG | + |
Preference number: 5 (lower is better) Translates to: VKEPVDWEAITLQSV*KNYDEILQLQNKVR Trigger: CCTGACCTTGTTCTGGAGCTGAAGAATCTCATCGTAATTTTTGCAGACACTCTGCAGGGTTATGGCTTCCCAGTCAACCGGCTCTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GTTTTCAGAGTCCAGTTGATCCAGTTTGTTTCCACAGCACTGAGATCTTCTCTGGAAGCTCTTCTGCTGTaGTGCCTGCTTCATGGCTGC | + |
Preference number: 5 (lower is better) Translates to: VFRVQLIQFVSTALRSSLEALLL*CLLHGC Trigger: GCAGCCATGAAGCAGGCACAACAGCAGAAGAGCTTC...CAGAGAAGATCTCAGTGCTGTGGAAACAAACTGGATCAACTGGACTCTGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCTGCAGGGTGTCCCCTaGGAATCCTGGCACAGGCTC | + |
Preference number: 5 (lower is better) Translates to: VFPLLQFLASVNKLLSHDLQGVP*ESWHRL Trigger: GAGCCTGTGCCAGGATTCCAAGGGGACACCCTGCAG...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 90 bp | TGTATGACATCGAGGTTAAACTGCTGCACGGCTCCCATGCTGATCTaGTTTAACTCACTGTCCAGTAGCATCTGCATTAAGGATGTGGAC | + |
Preference number: 5 (lower is better) Translates to: CMTSRLNCCTAPMLI*FNSLSSSICIKDVD Trigger: GTCCACATCCTTAATGCAGATGCTACTGGACAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGTCATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 90 bp | ATCAACTGTTTCATGCACACTCGACTGCGGCTGCAGAACCAGGCGTaGCTGCTTCTTCCTTTGCTTCCGGTAATAATTTTCAAATGTTTC | + |
Preference number: 5 (lower is better) Translates to: INCFMHTRLRLQNQA*LLLPLLPVIIFKCF Trigger: GAAACATTTGAAAATTATTACCGGAAGCAAAGGAAGAAGCAGGCACGCCTGGTTCTGCAGCCGCAGTCGAGTGTGCATGAAACAGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 90 bp | ACTGTCTCTATCAGCTTCTGTCTGTCTCGGTCATTCTTCCGGAACTaGGCGAATATGTTATTCTTCTTGCTGGTGTCCTTCATCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: TVSISFCLSRSFFRN*ANMLFFLLVSFIFS Trigger: GGAGAAGATGAAGGACACCAGCAAGAAGAATAACATATTCGCCCAGTTCCGGAAGAATGACCGAGACAGACAGAAGCTGATAGAGACAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | TCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGACATGGAGATGTCTTaGATGTCTTCCCGGAGTTTA | + |
Preference number: 5 (lower is better) Translates to: SVNKLLSHDQCWPQRSTQDMEMS*MSSRSL Trigger: TAAACTCCGGGAAGACATCAAAGACATCTCCATGTC...CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAGAAGCTCTTCTGCTGTaGTGCCTGCTTCATGGCTGC | + |
Preference number: 5 (lower is better) Translates to: ALISVFPLLQFLASVNKLEALLL*CLLHGC Trigger: GCAGCCATGAAGCAGGCACAACAGCAGAAGAGCTTC...TAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGGCATGTGCCTGCTTCTTCCTTaGCTTCCGGTAATAATTTTC | + |
Preference number: 5 (lower is better) Translates to: KQVIVSRPVLATEKHSGMCLLLP*LPVIIF Trigger: GAAAATTATTACCGGAAGCAAAGGAAGAAGCAGGCA...CATGCCTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | TCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGCCACAGAGAAGCACTCAGCCATTAAATAACCACTaGCTCTCCCATCTGACTCAG | + |
Preference number: 5 (lower is better) Translates to: SVNKLLSHDQCWPQRSTQPLNNH*LSHLTQ Trigger: CTGAGTCAGATGGGAGAGCAAGTGGTTATTTAATGG...CTGAGTGCTTCTCTGTGGCCAGCACTGGTCGTGAGACAATAACTTGTTTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCAGCATCGGCCCTTACTTaGAGGAGTTCCGTAATCGCA | + |
Preference number: 5 (lower is better) Translates to: MSRKQRSGLHICVTVIYPASALT*RSSVIA Trigger: TGCGATTACGGAACTCCTCAAAGTAAGGGCCGATGC...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | TCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGGCATCGGCCCTTACTTaGAGGAGTTCCGTAATCGCA | + |
Preference number: 5 (lower is better) Translates to: STTVFGFCKQVIVSRPVLASALT*RSSVIA Trigger: TGCGATTACGGAACTCCTCAAAGTAAGGGCCGATGC...CAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GGAAAATGTACACGTGCTGGGTGGGTTTTCAGAGTCCAGTTGATCCAGTTTGTTGCTGCTTCACCTATTTaGTCAGAATGCTTTCGGATG | + |
Preference number: 5 (lower is better) Translates to: GKCTRAGWVFRVQLIQFVAASPI*SECFRM Trigger: CATCCGAAAGCATTCTGACAAAATAGGTGAAGCAGC...AACAAACTGGATCAACTGGACTCTGAAAACCCACCCAGCACGTGTACATTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | CCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCGGACAGCAATTATCTTaGAGAGGGCCATGTTCCAGA | + |
Preference number: 5 (lower is better) Translates to: PLLQFLASVNKLLSHDQCGQQLS*RGPCSR Trigger: TCTGGAACATGGCCCTCTCAAAGATAATTGCTGTCC...GCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | CATACAAATGATGTTTGCCGCCATTGCTTGTTTAAGCCCTCATCAGTGTCTTTCGGACAGCAATTATCTTaGAGAGGGCCATGTTCCAGA | + |
Preference number: 5 (lower is better) Translates to: HTNDVCRHCLFKPSSVSFGQQLS*RGPCSR Trigger: TCTGGAACATGGCCCTCTCAAAGATAATTGCTGTCC...GAAAGACACTGATGAGGGCTTAAACAAGCAATGGCGGCAAACATCATTTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACAGGACAGCAATTATCTTaGAGAGGGCCATGTTCCAGA | + |
Preference number: 5 (lower is better) Translates to: AIHVSHTEVKLEAKSLITGQQLS*RGPCSR Trigger: TCTGGAACATGGCCCTCTCAAAGATAATTGCTGTCC...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTACTTCTTGTGTGCGTTaGGCTGATCATCATACACAG | + |
Preference number: 5 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCTSCVR*ADHHTQ Trigger: CTGTGTATGATGATCAGCCAAACGCACACAAGAAGT...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACAGCTGCTTCACCTATTTaGTCAGAATGCTTTCGGATG | + |
Preference number: 5 (lower is better) Translates to: AIHVSHTEVKLEAKSLITAASPI*SECFRM Trigger: CATCCGAAAGCATTCTGACAAAATAGGTGAAGCAGC...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTCTGGTCAGCAGCAGATaGGTTGATTTCCTAAGCATG | + |
Preference number: 5 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVLVSSR*VDFLSM Trigger: CATGCTTAGGAAATCAACCAATCTGCTGCTGACCAG...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCAACTTCTTGTGTGCGTTaGGCTGATCATCATACACAG | + |
Preference number: 5 (lower is better) Translates to: MSRKQRSGLHICVTVIYPTSCVR*ADHHTQ Trigger: CTGTGTATGATGATCAGCCAAACGCACACAAGAAGT...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | TCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGCTCTTTTCCTGCATCTaGAAACCTTCGGTTGGTATC | + |
Preference number: 5 (lower is better) Translates to: STTVFGFCKQVIVSRPVLLFSCI*KPSVGI Trigger: GATACCAACCGAAGGTTTCAAGATGCAGGAAAAGAG...CAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTGACATGGAGATGTCTTaGATGTCTTCCCGGAGTTTA | + |
Preference number: 5 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVDMEMS*MSSRSL Trigger: TAAACTCCGGGAAGACATCAAAGACATCTCCATGTC...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCTTGTTTAAGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTTGCCTGCTTCTTCCTTaGCTTCCGGTAATAATTTTC | + |
Preference number: 5 (lower is better) Translates to: ACLSPHQCLSSTTVFGFCCLLLP*LPVIIF Trigger: GAAAATTATTACCGGAAGCAAAGGAAGAAGCAGGCA...ACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCTTAAACAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCTGGTCAGCAGCAGATaGGTTGATTTCCTAAGCATG | + |
Preference number: 5 (lower is better) Translates to: VFPLLQFLASVNKLLSHDLVSSR*VDFLSM Trigger: CATGCTTAGGAAATCAACCAATCTGCTGCTGACCAG...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AGCTCTTCACACTTATTTTACAGAGTCAGGTCATCTTACAAGCATAAATCCGGACTGGTCAGCAGCAGATaGGTTGATTTCCTAAGCATG | + |
Preference number: 5 (lower is better) Translates to: SSSHLFYRVRSSYKHKSGLVSSR*VDFLSM Trigger: CATGCTTAGGAAATCAACCAATCTGCTGCTGACCAG...TCCGGATTTATGCTTGTAAGATGACCTGACTCTGTAAAATAAGTGTGAAGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | ATGTCGAGAAAACAGAGGTCAGGTTTACACATTTGTGTCACTGTGATTTACCCACCATTAAATAACCACTaGCTCTCCCATCTGACTCAG | + |
Preference number: 5 (lower is better) Translates to: MSRKQRSGLHICVTVIYPPLNNH*LSHLTQ Trigger: CTGAGTCAGATGGGAGAGCAAGTGGTTATTTAATGG...TGGGTAAATCACAGTGACACAAATGTGTAAACCTGACCTCTGTTTTCTCGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS TCA 90 bp | CGTTATATTGATCTCTTATTTCGAATAAAAGGTCAAAGAGCCGGTTaGCTGGGAAGCCATAACCCTGCAGAGTGTCTGCAAAAATTACGA | + |
Preference number: 5 (lower is better) Translates to: RYIDLLFRIKGQRAG*LGSHNPAECLQKLR Trigger: TCGTAATTTTTGCAGACACTCTGCAGGGTTATGGCTTCCCAGTCAACCGGCTCTTTGACCTTTTATTCGAAATAAGAGATCAATATAACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS TCA 90 bp | ATACAAGCGTCTAGCTTTTCCATAAACTTCTTGTGTGCGTTTGGCTaGTCATCATACACAGATCTTAAAGTAGCTTCAATGGGCAGCTCA | + |
Preference number: 5 (lower is better) Translates to: IQASSFSINFLCAFG*SSYTDLKVASMGSS Trigger: TGAGCTGCCCATTGAAGCTACTTTAAGATCTGTGTATGATGATCAGCCAAACGCACACAAGAAGTTTATGGAAAAGCTAGACGCTTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AGCTCTTCACACTTATTTTACAGAGTCAGGTCATCTTACAAGCATAAATCCGGAACTTCTTGTGTGCGTTaGGCTGATCATCATACACAG | + |
Preference number: 5 (lower is better) Translates to: SSSHLFYRVRSSYKHKSGTSCVR*ADHHTQ Trigger: CTGTGTATGATGATCAGCCAAACGCACACAAGAAGT...TCCGGATTTATGCTTGTAAGATGACCTGACTCTGTAAAATAAGTGTGAAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCTCTTTTCCTGCATCTaGAAACCTTCGGTTGGTATC | + |
Preference number: 5 (lower is better) Translates to: VFPLLQFLASVNKLLSHDLFSCI*KPSVGI Trigger: GATACCAACCGAAGGTTTCAAGATGCAGGAAAAGAG...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACGACATGGAGATGTCTTaGATGTCTTCCCGGAGTTTA | + |
Preference number: 5 (lower is better) Translates to: VFPLLQFLASVNKLLSHDDMEMS*MSSRSL Trigger: TAAACTCCGGGAAGACATCAAAGACATCTCCATGTC...GTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCTAAAAGTCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTGCATCCCAATGCCTGCTTCTTCCTTaGCTTCCGGTAATAATTTTC | + |
Preference number: 5 (lower is better) Translates to: AKSLITAVFSLSAVAASQCLLLP*LPVIIF Trigger: GAAAATTATTACCGGAAGCAAAGGAAGAAGCAGGCA...TTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGACTTTTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | GCCATCCATGTAAGCCACACTGAGGTGAAGCTAGAAGCTAAAAGTCTAATAACAAAAGTCCATAAAGTCTaGTGGTGTGAACGGTTTCTT | + |
Preference number: 5 (lower is better) Translates to: AIHVSHTEVKLEAKSLITKVHKV*WCERFL Trigger: AAGAAACCGTTCACACCACAAGACTTTATGGACTTT...TGTTATTAGACTTTTAGCTTCTAGCTTCACCTCAGTGTGGCTTACATGGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AGTCTAATAACAGCAGTATTTTCCTTATCAGCAGTGGCTGCATCCCAAACTATACCATTAAATAACCACTaGCTCTCCCATCTGACTCAG | + |
Preference number: 5 (lower is better) Translates to: SLITAVFSLSAVAASQTIPLNNH*LSHLTQ Trigger: CTGAGTCAGATGGGAGAGCAAGTGGTTATTTAATGG...TATAGTTTGGGATGCAGCCACTGCTGATAAGGAAAATACTGCTGTTATTAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238954.2 |
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CDS TCA 90 bp | ATAGGAAACTTCTTTGGGAAAGATTGCTTTTCGAGGTCTGGATCCTaGAACGGGAATCTACTGATGACTACTTTATATTCTTCCTCACTG | + |
Preference number: 5 (lower is better) Translates to: IGNFFGKDCFSRSGS*NGNLLMTTLYSSSL Trigger: CAGTGAGGAAGAATATAAAGTAGTCATCAGTAGATTCCCGTTTCAGGATCCAGACCTCGAAAAGCAATCTTTCCCAAAGAAGTTTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGCTGCTTCACCTATTTaGTCAGAATGCTTTCGGATG | + |
Preference number: 5 (lower is better) Translates to: SVFPLLQFLASVNKLLSHAASPI*SECFRM Trigger: CATCCGAAAGCATTCTGACAAAATAGGTGAAGCAGC...GTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | TCTACTACAGTTTTTGGCTTCTGTAAACAAGTTATTGTCTCACGACCAGTGCTGAAAGTCCATAAAGTCTaGTGGTGTGAACGGTTTCTT | + |
Preference number: 5 (lower is better) Translates to: STTVFGFCKQVIVSRPVLKVHKV*WCERFL Trigger: AAGAAACCGTTCACACCACAAGACTTTATGGACTTT...CAGCACTGGTCGTGAGACAATAACTTGTTTACAGAAGCCAAAAACTGTAGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS-3UTR CAA 90 bp | AGCCCTCATCAGTGTCTTTCCTCTACTACAGTTTTTGGCTTCTGTAAACAAGTTAAAGTCCATAAAGTCTaGTGGTGTGAACGGTTTCTT | + |
Preference number: 5 (lower is better) Translates to: SPHQCLSSTTVFGFCKQVKVHKV*WCERFL Trigger: AAGAAACCGTTCACACCACAAGACTTTATGGACTTT...AACTTGTTTACAGAAGCCAAAAACTGTAGTAGAGGAAAGACACTGATGAGGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 72 bp | GTGCGTTTGGCTGATCATCATACACAGATCGGAGGGTaGGCCCTACGCAGGCGGTGTCGGTGCTTTCGATCT | + |
Preference number: 6 (lower is better) Translates to: VRLADHHTQIGG*ALRRRCRCFRS Trigger: AGATCGAAAGCACCGACACCGCCTGCGTAGGGCCCACCCTCCGATCTGTGTATGATGATCAGCCAAACGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 |
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CDS GCA 72 bp | GCTGGTGTCCTTCATCTTCTCCAAAAGAGTGAGGGCTaGGTGTGGGTTCACTCGGAGGTACTTGGAAGCCGG | + |
Preference number: 6 (lower is better) Translates to: AGVLHLLQKSEG*VWVHSEVLGSR Trigger: CCGGCTTCCAAGTACCTCCGAGTGAACCCACACGCAGCCCTCACTCTTTTGGAGAAGATGAAGGACACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 72 bp | TCTTCCCGGAGTTTAGGGAGTGTCTCCATCATGAGCTaGCAGAAGCGGTACTGGCTGACCCGGGGAAAGTAC | + |
Preference number: 6 (lower is better) Translates to: SSRSLGSVSIMS*QKRYWLTRGKY Trigger: GTACTTTCCCCGGGTCAGCCAGTACCGCTTCTGCCAGCTCATGATGGAGACACTCCCTAAACTCCGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 72 bp | GGGAGTGTCTCCATCATGAGCTGGCAGAAGCGGTACTaGCTGACCCGGGGAAAGTACACATTCTCTAGCTGT | + |
Preference number: 6 (lower is better) Translates to: GSVSIMSWQKRY*LTRGKYTFSSC Trigger: ACAGCTAGAGAATGTGTACTTTCCCCGGGTCAGCCAGTACCGCTTCTGCCAGCTCATGATGGAGACACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CAA 90 bp | CTGTCTCGGTCATTCTTCCGGAACTGGGCGAATATGTTATTCTTCTaGCTGGTGTCCTTCATCTTCTCCAAAAGAGTGAGGGCTGCGTGT | + |
Preference number: 6 (lower is better) Translates to: LSRSFFRNWANMLFF*LVSFIFSKRVRAAC Trigger: ACACGCAGCCCTCACTCTTTTGGAGAAGATGAAGGACACCAGCAAGAAGAATAACATATTCGCCCAGTTCCGGAAGAATGACCGAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 72 bp | CCGGTTGACTGGGAAGCCATAACCCTGCAGAGTGTCTaGAAAAATTACGATGAGATTCTTCAGCTCCAGAAC | + |
Preference number: 6 (lower is better) Translates to: PVDWEAITLQSV*KNYDEILQLQN Trigger: GTTCTGGAGCTGAAGAATCTCATCGTAATTTTTGCAGACACTCTGCAGGGTTATGGCTTCCCAGTCAACCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 72 bp | TCGAGGTTAAACTGCTGCACGGCTCCCATGCTGATCTaGTTTAACTCACTGTCCAGTAGCATCTGCATTAAG | + |
Preference number: 6 (lower is better) Translates to: SRLNCCTAPMLI*FNSLSSSICIK Trigger: CTTAATGCAGATGCTACTGGACAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 72 bp | AACAGTTCGCACTGTATGACATCGAGGTTAAACTGCTaGACGGCTCCCATGCTGATCTGCTTTAACTCACTG | + |
Preference number: 6 (lower is better) Translates to: NSSHCMTSRLNC*TAPMLICFNSL Trigger: CAGTGAGTTAAAGCAGATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGTCATACAGTGCGAACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS GCA 72 bp | GCAAACAGTTCGCACTGTATGACATCGAGGTTAAACTaGTGCACGGCTCCCATGCTGATCTGCTTTAACTCA | + |
Preference number: 6 (lower is better) Translates to: ANSSHCMTSRLN*CTAPMLICFNS Trigger: TGAGTTAAAGCAGATCAGCATGGGAGCCGTGCAGCAGTTTAACCTCGATGTCATACAGTGCGAACTGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS TCA 72 bp | AGCCATAACCCTGCAGAGTGTCTGCAAAAATTACGATaGGATTCTTCAGCTCCAGAACAAGGTCAGGGTCAG | + |
Preference number: 6 (lower is better) Translates to: SHNPAECLQKLR*DSSAPEQGQGQ Trigger: CTGACCCTGACCTTGTTCTGGAGCTGAAGAATCTCATCGTAATTTTTGCAGACACTCTGCAGGGTTATGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 72 bp | TTAACTCACTGTCCAGTAGCATCTGCATTAAGGATGTaGACAGATGTTGGCAGGCTGACATGCAAGCTGTCT | + |
Preference number: 6 (lower is better) Translates to: LTHCPVASALRM*TDVGRLTCKLS Trigger: AGACAGCTTGCATGTCAGCCTGCCAACATCTGTCCACATCCTTAATGCAGATGCTACTGGACAGTGAGTTAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS TCA 72 bp | CAAACCTCATATTATTTTGCTTCTGCAGAGCAACACTaGAGCTCTTCTGCTGTTGTGCCTGCTTCATGGCTG | + |
Preference number: 6 (lower is better) Translates to: QTSYYFASAEQH*SSSAVVPASWL Trigger: CAGCCATGAAGCAGGCACAACAGCAGAAGAGCTTCAGTGTTGCTCTGCAGAAGCAAAATAATATGAGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS TCA 72 bp | GATCTCTTATTTCGAATAAAAGGTCAAAGAGCCGGTTaGCTGGGAAGCCATAACCCTGCAGAGTGTCTGCAA | + |
Preference number: 6 (lower is better) Translates to: DLLFRIKGQRAG*LGSHNPAECLQ Trigger: TTGCAGACACTCTGCAGGGTTATGGCTTCCCAGTCAACCGGCTCTTTGACCTTTTATTCGAAATAAGAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 72 bp | AATAAGAGGCACAGACTGGGACATAGGAAACTTCTTTaGGAAAGATTGCTTTTCGAGGTCTGGATCCTGAAA | + |
Preference number: 6 (lower is better) Translates to: NKRHRLGHRKLL*ERLLFEVWILK Trigger: TTTCAGGATCCAGACCTCGAAAAGCAATCTTTCCCAAAGAAGTTTCCTATGTCCCAGTCTGTGCCTCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 72 bp | TTAAATAACCACTTGCTCTCCCATCTGACTCAGCCATaGTCCAGTCATAATCAGCCAGCTGAACAAATTCAT | + |
Preference number: 6 (lower is better) Translates to: LNNHLLSHLTQP*SSHNQPAEQIH Trigger: ATGAATTTGTTCAGCTGGCTGATTATGACTGGACCATGGCTGAGTCAGATGGGAGAGCAAGTGGTTATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CCA 72 bp | AGGAAACTTCTTTGGGAAAGATTGCTTTTCGAGGTCTaGATCCTGAAACGGGAATCTACTGATGACTACTTT | + |
Preference number: 6 (lower is better) Translates to: RKLLWERLLFEV*ILKRESTDDYF Trigger: AAAGTAGTCATCAGTAGATTCCCGTTTCAGGATCCAGACCTCGAAAAGCAATCTTTCCCAAAGAAGTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CAA 90 bp | ATAAGGTTCAGTAAACAGCTACTCAGAATTCTGGTCAGCAGCAGATaGGTTGATTTCCTAAGCATGTCATCTATTTCTGTTGAGCTTCGG | + |
Preference number: 6 (lower is better) Translates to: IRFSKQLLRILVSSR*VDFLSMSSISVELR Trigger: CCGAAGCTCAACAGAAATAGATGACATGCTTAGGAAATCAACCAATCTGCTGCTGACCAGAATTCTGAGTAGCTGTTTACTGAACCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS TCA 72 bp | TTCTTTGGGAAAGATTGCTTTTCGAGGTCTGGATCCTaGAACGGGAATCTACTGATGACTACTTTATATTCT | + |
Preference number: 6 (lower is better) Translates to: FFGKDCFSRSGS*NGNLLMTTLYS Trigger: AGAATATAAAGTAGTCATCAGTAGATTCCCGTTTCAGGATCCAGACCTCGAAAAGCAATCTTTCCCAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |
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CDS CAA 72 bp | AGTAAACAGCTACTCAGAATTCTGGTCAGCAGCAGATaGGTTGATTTCCTAAGCATGTCATCTATTTCTGTT | + |
Preference number: 6 (lower is better) Translates to: SKQLLRILVSSR*VDFLSMSSISV Trigger: AACAGAAATAGATGACATGCTTAGGAAATCAACCAATCTGCTGCTGACCAGAATTCTGAGTAGCTGTTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066439.8 ENSMUST00000238817.2 ENSMUST00000238954.2 |