Pregenerated sensors for EXOC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061244Ensembl transcript IDs: ENSMUST00000160386.3, ENSMUST00000161504.8, ENSMUST00000162175.9
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATGGAGGGTTGGGAAAGCCAGAGGCTGCAGATGCCCAAGCAAATaGACTGCAGACAACTTGCAGCTGTGGGATTTTCCTCTGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: VWRVGKARGCRCPSK*TADNLQLWDFPLDP Trigger: GGGATCCAGAGGAAAATCCCACAGCTGCAAGTTGTCTGCAGTTCATTTGCTTGGGCATCTGCAGCCTCTGGCTTTCCCAACCCTCCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR TCA 90 bp | CAGGGTTGTGTTGCACATCTGGAGTGTCTTCCAGAACGGACTACGTaGGACCTTGGGGAAAGTGGAAGATTTGGGCTTAGCACTAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: QGCVAHLECLPERTT*DLGESGRFGLSTRN Trigger: ATTCCTAGTGCTAAGCCCAAATCTTCCACTTTCCCCAAGGTCTCACGTAGTCCGTTCTGGAAGACACTCCAGATGTGCAACACAACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR TCA 90 bp | TTTTCTAGCCACCAACCAGGCATGTACTTGAGTGACCCTTACTCTTaGACCAACAGTTCAAGCATGCCTTATGTGACTACTCTGAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: FSSHQPGMYLSDPYS*TNSSSMPYVTTLRC Trigger: GCACCTCAGAGTAGTCACATAAGGCATGCTTGAACTGTTGGTTCAAGAGTAAGGGTCACTCAAGTACATGCCTGGTTGGTGGCTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR GCA 90 bp | ACTAGGAATCAGGATGTCAAACGTGCCAAGGGTATGTGCAATTACTaGAACACAATGATATACCCATCAGTCCCTACAACAGCCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: TRNQDVKRAKGMCNY*NTMIYPSVPTTASS Trigger: ACTGCTGGCTGTTGTAGGGACTGATGGGTATATCATTGTGTTGCAGTAATTGCACATACCCTTGGCACGTTTGACATCCTGATTCCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR GCA 90 bp | GGGCTTAGCACTAGGAATCAGGATGTCAAACGTGCCAAGGGTATGTaGAATTACTGCAACACAATGATATACCCATCAGTCCCTACAACA | + |
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Preference number: 1 (lower is better) Translates to: GLSTRNQDVKRAKGM*NYCNTMIYPSVPTT Trigger: TGTTGTAGGGACTGATGGGTATATCATTGTGTTGCAGTAATTGCACATACCCTTGGCACGTTTGACATCCTGATTCCTAGTGCTAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR CCA 90 bp | TATCACAGCCCAAGCTCAGGTCTTCACAACATTCATGTAGGAGCCTaGCTTCTGCTCTTCTCTCTTTCCCTGCATTTAGTTTATATTGCG | + |
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Preference number: 1 (lower is better) Translates to: YHSPSSGLHNIHVGA*LLLFSLSLHLVYIA Trigger: CGCAATATAAACTAAATGCAGGGAAAGAGAGAAGAGCAGAAGCCAGGCTCCTACATGAATGTTGTGAAGACCTGAGCTTGGGCTGTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR TCA 90 bp | TCAGAAGTGAGTGAGGTAGAGCTGTATGAATATAAGAGGGAACACTaGGAAGTACGACTGCGATCTAGCCGCAAACAAACAGGAATCCAA | + |
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Preference number: 1 (lower is better) Translates to: SEVSEVELYEYKREH*EVRLRSSRKQTGIQ Trigger: TTGGATTCCTGTTTGTTTGCGGCTAGATCGCAGTCGTACTTCTCAGTGTTCCCTCTTATATTCATACAGCTCTACCTCACTCACTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR CCA 90 bp | TATCGAGAACCTGTTCTGGCTCTCTCTTTTCTGAGGACAGCTATCTaGAAAGCCTCTAAACCTGCCACTATATCCTGCAAAAGTGACAAT | + |
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Preference number: 1 (lower is better) Translates to: YREPVLALSFLRTAI*KASKPATISCKSDN Trigger: ATTGTCACTTTTGCAGGATATAGTGGCAGGTTTAGAGGCTTTCCAGATAGCTGTCCTCAGAAAAGAGAGAGCCAGAACAGGTTCTCGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR TCA 90 bp | AGGATGTCAAACGTGCCAAGGGTATGTGCAATTACTGCAACACAATaGTATACCCATCAGTCCCTACAACAGCCAGCAGTGAAATATGAA | + |
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Preference number: 1 (lower is better) Translates to: RMSNVPRVCAITATQ*YTHQSLQQPAVKYE Trigger: TTCATATTTCACTGCTGGCTGTTGTAGGGACTGATGGGTATATCATTGTGTTGCAGTAATTGCACATACCCTTGGCACGTTTGACATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR TCA 90 bp | TATGTAATGTTACTTGAATGTATGGTGTCAGGGCTGACCAGAATTTaGAAGAGAGCAAGAAGGGATATATGGGAGGATTCAGAGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: YVMLLECMVSGLTRI*KRARRDIWEDSEGR Trigger: TCTTCCCTCTGAATCCTCCCATATATCCCTTCTTGCTCTCTTTCAAATTCTGGTCAGCCCTGACACCATACATTCAAGTAACATTACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR CCA 90 bp | GCAAATCACAAAATGCGCCTTCTGGAAACATATCACAATACTGTCTaGAAACACCGGGATGAGGAGTTGTGTAATTACACTTTCCATGTA | + |
|
Preference number: 1 (lower is better) Translates to: ANHKMRLLETYHNTV*KHRDEELCNYTFHV Trigger: TACATGGAAAGTGTAATTACACAACTCCTCATCCCGGTGTTTCCAGACAGTATTGTGATATGTTTCCAGAAGGCGCATTTTGTGATTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR GCA 90 bp | AACCAAGTACTTAAAATGCTGGTCTCATCAGAAATAGAACTTGGTTaGTCTTTGTGCTCCAGCTTATCACTTAACATGAACTTGACCTCA | + |
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Preference number: 1 (lower is better) Translates to: NQVLKMLVSSEIELG*SLCSSLSLNMNLTS Trigger: TGAGGTCAAGTTCATGTTAAGTGATAAGCTGGAGCACAAAGAGCAACCAAGTTCTATTTCTGATGAGACCAGCATTTTAAGTACTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR GCA 90 bp | ATGACAGACTCTACAGGTCTGAAAAGCAGGCTTTCAGTGCAAGCTTaGCTCCAAACTTGGAATATATACTATTCATTATCTAAAATTCTC | + |
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Preference number: 1 (lower is better) Translates to: MTDSTGLKSRLSVQA*LQTWNIYYSLSKIL Trigger: GAGAATTTTAGATAATGAATAGTATATATTCCAAGTTTGGAGGCAAGCTTGCACTGAAAGCCTGCTTTTCAGACCTGTAGAGTCTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR TCA 90 bp | CTTTGGCAAAAGGTACTAGGCTCCATTATGTCCATCATGTCTAACTaGAAATTCCCATGTATATATAAAAGCATCTTATCTACTGACAAC | + |
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Preference number: 1 (lower is better) Translates to: LWQKVLGSIMSIMSN*KFPCIYKSILSTDN Trigger: GTTGTCAGTAGATAAGATGCTTTTATATATACATGGGAATTTTCAGTTAGACATGATGGACATAATGGAGCCTAGTACCTTTTGCCAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR CCA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCGACAATGACAAAAGTTaGCCTGCTCATTGCCCGCCG | + |
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Preference number: 2 (lower is better) Translates to: HYLDQAGFELRNPPVSASDNDKS*PAHCPP Trigger: CGGCGGGCAATGAGCAGGCCAACTTTTGTCATTGTC...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR CAA 90 bp | GTGTTGCACATCTGGAGTGTCTTCCAGAACGGACTACGTGAGACCTaGGGGAAAGTGGAAGATTTGGGCTTAGCACTAGGAATCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: VLHIWSVFQNGLRET*GKVEDLGLALGIRM Trigger: CATCCTGATTCCTAGTGCTAAGCCCAAATCTTCCACTTTCCCCAAGGTCTCACGTAGTCCGTTCTGGAAGACACTCCAGATGTGCAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR CAA 90 bp | GCAACCATTGGGATTATAACTAGAGAACAGTGGGTCAGGGTTGTGTaGCACATCTGGAGTGTCTTCCAGAACGGACTACGTGAGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: ATIGIITREQWVRVV*HIWSVFQNGLRETL Trigger: CAAGGTCTCACGTAGTCCGTTCTGGAAGACACTCCAGATGTGCAACACAACCCTGACCCACTGTTCTCTAGTTATAATCCCAATGGTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCATTACCGAGGCCTTCTaGGAAAACAATCCATTGCCT | + |
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Preference number: 2 (lower is better) Translates to: HYLDQAGFELRNPPVSASITEAF*ENNPLP Trigger: AGGCAATGGATTGTTTTCTCAGAAGGCCTCGGTAAT...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | CTTAGCCAGCACTGCTTCTGGATTACTAAAGATGTCTCCAACCTGCTTGTTCACAAAATGAAGGAGGACTaGAGCCACCTCCCTCATCCG | + |
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Preference number: 2 (lower is better) Translates to: LSQHCFWITKDVSNLLVHKMKED*SHLPHP Trigger: CGGATGAGGGAGGTGGCTGCAGTCCTCCTTCATTTT...GTGAACAAGCAGGTTGGAGACATCTTTAGTAATCCAGAAGCAGTGCTGGCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
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| 3UTR CAA 90 bp | CTTGCAGCTGTGGGATTTTCCTCTGGATCCCAGAGTAAGACATTGTaGAGACAAACCAGTAAACCTACAGTGGGGTGTGAGGATCATGAG | + |
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Preference number: 2 (lower is better) Translates to: LAAVGFSSGSQSKTL*RQTSKPTVGCEDHE Trigger: CTCATGATCCTCACACCCCACTGTAGGTTTACTGGTTTGTCTCAACAATGTCTTACTCTGGGATCCAGAGGAAAATCCCACAGCTGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCCTTAGGGTTTTCACCTaGCAAACAGAAATAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: HYLDQAGFELRNPPVSASLRVFT*QTEIVA Trigger: AGCTACTATTTCTGTTTGGCAGGTGAAAACCCTAAG...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR CCA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCGTTTACCCTACAATTTaGAAGTCCACCATAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: HYLDQAGFELRNPPVSASVYPTI*KSTIGS Trigger: ACTTCCTATGGTGGACTTCCAAATTGTAGGGTAAAC...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATCTGAGGACAGCTATCTaGAAAGCCTCTAAACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNLRTAI*KASKPA Trigger: GGCAGGTTTAGAGGCTTTCCAGATAGCTGTCCTCAG...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGGCAGGTTTCTTTGGTAAGGTTGTTAATACCCTCTCTTTACACTTGAGCGCAAGAAGGGATATATaGGAGGATTCAGAGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: KGAGFFGKVVNTLSLHLSARRDI*EDSEGR Trigger: TCTTCCCTCTGAATCCTCCCATATATCCCTTCTTGC...GCTCAAGTGTAAAGAGAGGGTATTAACAACCTTACCAAAGAAACCTGCCCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | AACCTCATATCTACATTTCCCAATGAGGACCAAACACTGGGAGAAAAGAAAACTTCCTTACCTGCTCTGTaGCTTAGGGTTTTCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: NLISTFPNEDQTLGEKKTSLPAL*LRVFTC Trigger: GCAGGTGAAAACCCTAAGGCACAGAGCAGGTAAGGA...AGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGGCAACTGTGTTTAATTaGTTGTCCTATTTGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: IVTQASLLMSFLIHFPHPATVFN*LSYLPQ Trigger: TTGGGGCAAATAGGACAAGCAATTAAACACAGTTGC...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTCAACCGGGATCCTCTTaGGATGTGAGAAGTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSQPGSS*DVRSSL Trigger: TAAAGAACTTCTCACATCTCAAGAGGATCCCGGTTG...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | AACCTCATATCTACATTTCCCAATGAGGACCAAACACTGGGAGAAAAGAAAACTTGGCTCTCTCTTTTCTaGGGACAGCTATCTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: NLISTFPNEDQTLGEKKTWLSLF*GQLSGK Trigger: CTTTCCAGATAGCTGTCCTCAGAAAAGAGAGAGCCA...AGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGTTTCTGTGTGCTCCCTaGAGTGTTTACAAACAATAT | + |
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Preference number: 2 (lower is better) Translates to: IVTQASLLMSFLIHFPHPFLCAP*SVYKQY Trigger: ATATTGTTTGTAAACACTGCAGGGAGCACACAGAAA...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATTGGAAAATTCTGTTGTaGGGAGTGCAAAGACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNWKILL*GVQRQC Trigger: GCACTGTCTTTGCACTCCGCACAACAGAATTTTCCA...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCAAATCCACCAGTCTCTaGCTCCCGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLKSTSL*LPSAGI Trigger: AATCCCAGCACTCGGGAGGCAGAGACTGGTGGATTT...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCGGGTCAGGGTTGTGTTaGACATCTGGAGTGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLGSGLC*TSGVSS Trigger: GGAAGACACTCCAGATGTGCAACACAACCCTGACCC...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR CCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCTTTAATCCCAGCACTTaGGAGGCAGAGGCAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLFNPST*EAEAGE Trigger: TTCCCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGCTAATCCATTCCATCTaGTCAAATATTAGTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: IVTQASLLMSFLIHFPHPLIHSI*SNISAN Trigger: GTTTGCACTAATATTTGAGCAGATGGAATGGATTAG...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATACACACTTTTCTGTGTaGTCCCTGCAGTGTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNTHFSV*SLQCLQ Trigger: TTGTAAACACTGCAGGGAGCACACAGAAAAGTGTGT...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTACTTCAGAAATGCTTTaGGACTGGAGAATGAGAATG | + |
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Preference number: 2 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSTSEML*DWRMRM Trigger: CATTCTCATTCTCCAGTCTCAAAGCATTTCTGAAGT...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATTGTTCAGGGAGCTTGTaGAAAACATTTTACACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNCSGSL*KTFYTP Trigger: AGGAGTGTAAAATGTTTTTCACAAGCTCCCTGAACA...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATCTATGTAATGTTACTTaGATGTATGGTGTCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNLCNVT*MYGVRA Trigger: AGCCCTGACACCATACATTCAAGTAACATTACATAG...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCACAGCCATACCACCCTaGAGATGCTCAATCACATCT | + |
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Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLTAIPP*RCSITS Trigger: AGATGTGATTGAGCATCTTCAGGGTGGTATGGCTGT...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCATAAGGAATCTCCTGTaGTTCCCATTACCGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTIRNLL*FPLPRP Trigger: AGGCCTCGGTAATGGGAAGCACAGGAGATTCCTTAT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCATAAGGAATCTCCTGTaGTTCCCATTACCGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLIRNLL*FPLPRP Trigger: AGGCCTCGGTAATGGGAAGCACAGGAGATTCCTTAT...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTCCTGCCACTATATCCTaGAAAAGTGACAATGACAAA | + |
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Preference number: 2 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSPATIS*KSDNDK Trigger: TTTGTCATTGTCACTTTTGCAGGATATAGTGGCAGG...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATGAAAATGCAAAAGACTaGAAGACAACAGCATCATGG | + |
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Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNENAKD*KTTASW Trigger: CCATGATGCTGTTGTCTTGCAGTCTTTTGCATTTTC...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR CAA 90 bp | GCTCAAATATTAGTGCAAACAATTATTCATTCGTATGCCTCATTGTaGTCCAACACAGACCTAGGCCTTCCTAATAATGCCTTTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: AQILVQTIIHSYASL*SNTDLGLPNNAFLL Trigger: CAGAAGAAAGGCATTATTAGGAAGGCCTAGGTCTGTGTTGGACAACAATGAGGCATACGAATGAATAATTGTTTGCACTAATATTTGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCATTACCGAGGCCTTCTaGGAAAACAATCCATTGCCT | + |
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Preference number: 2 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTITEAF*ENNPLP Trigger: AGGCAATGGATTGTTTTCTCAGAAGGCCTCGGTAAT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| 3UTR-3UTR TCA 90 bp | AACCTCATATCTACATTTCCCAATGAGGACCAAACACTGGGAGAAAAGAAAACTAAGCAGATAACATTCTaGTCTGTTCCTAGTGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: NLISTFPNEDQTLGEKKTKQITF*SVPSVY Trigger: GTAGACACTAGGAACAGATCAGAATGTTATCTGCTT...AGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATAAGTCACTGAGAAAATaGGCAACTGTGTTTAATTGC | + |
|
Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNKSLRK*ATVFNC Trigger: GCAATTAAACACAGTTGCTCATTTTCTCAGTGACTT...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATAACTTTCTAAGTCACTaGGAAAATGAGCAACTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNNFLSH*ENEQLC Trigger: ACACAGTTGCTCATTTTCTCAGTGACTTAGAAAGTT...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATCTTGTGGTAAAAATCTaGAAATACACTCTACTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNLVVKI*KYTLLE Trigger: CTCCAGTAGAGTGTATTTTCAGATTTTTACCACAAG...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATAAGTGCTTTCTGGAATaGAAACATAATTCTGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LVCKYLDGKARVDRYKMNKCFLE*KHNSGL Trigger: GAGACCAGAATTATGTTTGCATTCCAGAAAGCACTT...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCCCGACCTCACTCAGATaGAACCATTGGGATTATAAC | + |
|
Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLPTSLR*NHWDYN Trigger: GTTATAATCCCAATGGTTGCATCTGAGTGAGGTCGG...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTTTCATTCTTAGCCTATaGATAAGGAGATGTCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSFILSL*IRRCHV Trigger: CACATGACATCTCCTTATCCATAGGCTAAGAATGAA...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCTGGTTTGTAAGTACTTaGATGGGAAAGCTAGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLWFVST*MGKLGW Trigger: CCACCCTAGCTTTCCCATCCAAGTACTTACAAACCA...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCTGTTTATCAGTACCTAAGTTAAACTCCATCAATTTGCTGGAAAGACCGGTGAGACTTTTAAGATACTaGTCAGCATCAGATTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: VCLSVPKLNSINLLERPVRLLRY*SASDFL Trigger: TAGGAAATCTGATGCTGAGCAGTATCTTAAAAGTCT...CACCGGTCTTTCCAGCAAATTGATGGAGTTTAACTTAGGTACTGATAAACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCATGAGGACCAAACACTaGGAGAAAAGAAAACTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLMRTKH*EKRKLG Trigger: ACCCAGTTTTCTTTTCTCCCAGTGTTTGGTCCTCAT...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCTACAACAGCCAGCAGTaGAATATGAAAATACTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLYNSQQ*NMKILG Trigger: GCCTAGTATTTTCATATTTCACTGCTGGCTGTTGTA...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR GCA 90 bp | GACAAGAAAGTCTGTTTATCAGTACCTAAGTTAAACTCCATCAATTTGCTGGAAAAGCTTAGCCAGCACTaGTTCTGGATTACTAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DKKVCLSVPKLNSINLLEKLSQH*FWITKD Trigger: ATCTTTAGTAATCCAGAAGCAGTGCTGGCTAAGCTT...TTCCAGCAAATTGATGGAGTTTAACTTAGGTACTGATAAACAGACTTTCTTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
||
| 3UTR CAA 90 bp | TGGCTTCTGCTCTTCTCTCTTTCCCTGCATTTAGTTTATATTGCGTaGTTCAAAACCAAGACTTCTGCTTTATCTTTAATGATTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: WLLLFSLSLHLVYIA*FKTKTSALSLMISC Trigger: ACAAGAAATCATTAAAGATAAAGCAGAAGTCTTGGTTTTGAACAACGCAATATAAACTAAATGCAGGGAAAGAGAGAAGAGCAGAAGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCAATTATTCATTCGTATaGCTCATTGTTGTCCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLNYSFV*LIVVQH Trigger: GTGTTGGACAACAATGAGGCATACGAATGAATAATT...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCTCAGAATTTTCCTCATaGATGGATGACTTTCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLSEFSS*MDDFLI Trigger: AATCAGAAAGTCATCCATCCATGAGGAAAATTCTGA...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | CTCCCTACAGCACATGGGGACTCAGGACTGACCCCATaGCTCAGGCTCGGTGGCAAGTCTCTGTACCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPTAHGDSGLTP*LRLGGKSLYQL Trigger: CAGCTGGTACAGAGACTTGCCACCGAGCCTGAGCCATGGGGTCAGTCCTGAGTCCCCATGTGCTGTAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | CACATGTGGAGGTCACCATTTTCTCCCTACAGCACATaGGGACTCAGGACTGACCCCATGGCTCAGGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: HMWRSPFSPYST*GLRTDPMAQAR Trigger: CCGAGCCTGAGCCATGGGGTCAGTCCTGAGTCCCCATGTGCTGTAGGGAGAAAATGGTGACCTCCACATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | AGGCAGGCACAAAGAATGGCCTCATTGAAGGGCAGCTaGCTACCTAAGATGACAGGGGCACCAGGGTTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: RQAQRMASLKGS*LPKMTGAPGFR Trigger: GCGAAACCCTGGTGCCCCTGTCATCTTAGGTAGGCAGCTGCCCTTCAATGAGGCCATTCTTTGTGCCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | TGGGGACTCAGGACTGACCCCATGGCTCAGGCTCGGTaGCAAGTCTCTGTACCAGCTGAGTCTACCTACATA | + |
|
Preference number: 3 (lower is better) Translates to: WGLRTDPMAQAR*QVSVPAESTYI Trigger: TATGTAGGTAGACTCAGCTGGTACAGAGACTTGCCACCGAGCCTGAGCCATGGGGTCAGTCCTGAGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | TCAGGGACATATAGCGAGCCTATAATGCACACAGTATaGAGGGTTGGGAAAGCCAGAGGCTGCAGATGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGTYSEPIMHTV*RVGKARGCRCP Trigger: TGGGCATCTGCAGCCTCTGGCTTTCCCAACCCTCCATACTGTGTGCATTATAGGCTCGCTATATGTCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | GTTGGGAAAGCCAGAGGCTGCAGATGCCCAAGCAAATaGACTGCAGACAACTTGCAGCTGTGGGATTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VGKARGCRCPSK*TADNLQLWDFP Trigger: AGGAAAATCCCACAGCTGCAAGTTGTCTGCAGTTCATTTGCTTGGGCATCTGCAGCCTCTGGCTTTCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | GTTGCACATCTGGAGTGTCTTCCAGAACGGACTACGTaGGACCTTGGGGAAAGTGGAAGATTTGGGCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAHLECLPERTT*DLGESGRFGLS Trigger: GCTAAGCCCAAATCTTCCACTTTCCCCAAGGTCTCACGTAGTCCGTTCTGGAAGACACTCCAGATGTGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | GTTCAGCTCGTGAGATTTTCCTTAGACCAGCACTGCTaGTGCCCTACAGGAAAAGCACATCACCACCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: VQLVRFSLDQHC*CPTGKAHHHLH Trigger: GTGTAGGTGGTGATGTGCTTTTCCTGTAGGGCAGCAGCAGTGCTGGTCTAAGGAAAATCTCACGAGCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | GAAAGCCAGAGGCTGCAGATGCCCAAGCAAATGAACTaGAGACAACTTGCAGCTGTGGGATTTTCCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ESQRLQMPKQMN*RQLAAVGFSSG Trigger: TCCAGAGGAAAATCCCACAGCTGCAAGTTGTCTGCAGTTCATTTGCTTGGGCATCTGCAGCCTCTGGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGCAAAGAATGGCCTCATaGAAGGGCAGCTGCCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: IVTQASLLMSFLIHFPHPQRMAS*KGSCLP Trigger: AGGTAGGCAGCTGCCCTTCAATGAGGCCATTCTTTG...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | TGCCCTACAGGAAAAGCACATCACCACCTACACAAATaGTGCTCAACCGGGATCCTCTTGAGATGTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CPTGKAHHHLHK*CSTGILLRCEK Trigger: CTTCTCACATCTCAAGAGGATCCCGGTTGAGCATCATTTGTGTAGGTGGTGATGTGCTTTTCCTGTAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | TTAGTTCAGCTCGTGAGATTTTCCTTAGACCAGCACTaGTGCTGCCCTACAGGAAAAGCACATCACCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: LVQLVRFSLDQH*CCPTGKAHHHL Trigger: TAGGTGGTGATGTGCTTTTCCTGTAGGGCAGCAGCAGTGCTGGTCTAAGGAAAATCTCACGAGCTGAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | TGCAAAAGTGACAATGACAAAAGTTGGCCTGCTCATTaGCCGCCGCTTACCATCGTTAACACTGGGCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CKSDNDKSWPAH*PPLTIVNTGLN Trigger: GTTTAGCCCAGTGTTAACGATGGTAAGCGGCGGGCAATGAGCAGGCCAACTTTTGTCATTGTCACTTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | GCCACTATATCCTGCAAAAGTGACAATGACAAAAGTTaGCCTGCTCATTGCCCGCCGCTTACCATCGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ATISCKSDNDKS*PAHCPPLTIVN Trigger: GTTAACGATGGTAAGCGGCGGGCAATGAGCAGGCCAACTTTTGTCATTGTCACTTTTGCAGGATATAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | AGAAAATTCAGCTGTAGGTGTGCATATGCGTGTGTATaGGGACACATGCCACTGTACACATGTGGAGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RKFSCRCAYACV*GHMPLYTCGGH Trigger: GTGACCTCCACATGTGTACAGTGGCATGTGTCCCCATACACACGCATATGCACACCTACAGCTGAATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGGGGGAATTTCTGAGTTaGAAGCCAGCCTGGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: IVTQASLLMSFLIHFPHPGEFLS*KPAWFT Trigger: TGTGAACCAGGCTGGCTTCAAACTCAGAAATTCCCC...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCACTGTGTTTAATTGCTaGTCCTATTTGCCCCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: HYLDQAGFELRNPPVSASTVFNC*SYLPQM Trigger: CATTTGGGGCAAATAGGACAAGCAATTAAACACAGT...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | TGGGATTTTCCTCTGGATCCCAGAGTAAGACATTGTTaGGACAAACCAGTAAACCTACAGTGGGGTGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WDFPLDPRVRHC*DKPVNLQWGVR Trigger: CCTCACACCCCACTGTAGGTTTACTGGTTTGTCTCAACAATGTCTTACTCTGGGATCCAGAGGAAAATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | AACGTGCCAAGGGTATGTGCAATTACTGCAACACAATaGTATACCCATCAGTCCCTACAACAGCCAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NVPRVCAITATQ*YTHQSLQQPAV Trigger: CACTGCTGGCTGTTGTAGGGACTGATGGGTATATCATTGTGTTGCAGTAATTGCACATACCCTTGGCACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCGGCAGTTTGATAATGTaGATAACTATTCAGTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HYLDQAGFELRNPPVSASGSLIM*ITIQSG Trigger: ACCTGACTGAATAGTTATCAACATTATCAAACTGCC...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCCAGGGAATTTGTTTATaGAGCATGAACGTTAACATG | + |
|
Preference number: 3 (lower is better) Translates to: HYLDQAGFELRNPPVSASQGICL*SMNVNM Trigger: CATGTTAACGTTCATGCTCAATAAACAAATTCCCTG...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | CACCAACCAGGCATGTACTTGAGTGACCCTTACTCTTaGACCAACAGTTCAAGCATGCCTTATGTGACTACT | + |
|
Preference number: 3 (lower is better) Translates to: HQPGMYLSDPYS*TNSSSMPYVTT Trigger: AGTAGTCACATAAGGCATGCTTGAACTGTTGGTTCAAGAGTAAGGGTCACTCAAGTACATGCCTGGTTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | TCAGATGCAACCATTGGGATTATAACTAGAGAACAGTaGGTCAGGGTTGTGTTGCACATCTGGAGTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SDATIGIITREQ*VRVVLHIWSVF Trigger: GAAGACACTCCAGATGTGCAACACAACCCTGACCCACTGTTCTCTAGTTATAATCCCAATGGTTGCATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | AGTGAGGTAGAGCTGTATGAATATAAGAGGGAACACTaGGAAGTACGACTGCGATCTAGCCGCAAACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SEVELYEYKREH*EVRLRSSRKQT Trigger: TGTTTGTTTGCGGCTAGATCGCAGTCGTACTTCTCAGTGTTCCCTCTTATATTCATACAGCTCTACCTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | GACTGCCAAAAGAGCCAATCTGAAAAGGGCTTCCACTaGTCAAACCAGAGACAATGCTCACTAACCTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: DCQKSQSEKGFH*SNQRQCSLTLN Trigger: ATTCAAGGTTAGTGAGCATTGTCTCTGGTTTGATCAGTGGAAGCCCTTTTCAGATTGGCTCTTTTGGCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | AGTTACATGTCAAAGCACACTCCTGAGTGTGACCACTaGCTCGTCAGACAGAATTCTACTGGAAAATGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYMSKHTPECDH*LVRQNSTGKCK Trigger: TTTGCATTTTCCAGTAGAATTCTGTCTGACGAGGCAGTGGTCACACTCAGGAGTGTGCTTTGACATGTAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | ACGTGCATTTCAGGTTTGCTGTTTCCCTCACTATACTaGACCCTCTCCCCATGTAGTTGTTTGAGTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TCISGLLFPSLY*TLSPCSCLSVK Trigger: TTTAACACTCAAACAACTACATGGGGAGAGGGTGCAGTATAGTGAGGGAAACAGCAAACCTGAAATGCACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTGGAAAGACCGGTGGTTCTTGTATACAGATCATAGAGACTTTTAAGATAGACCTCCCCTCTTCTTaGGGCACTTGTAAACTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FAGKTGGSCIQIIETFKIDLPSS*GTCKLL Trigger: CAGGAGTTTACAAGTGCCCAAAGAAGAGGGGAGGTC...TATCTTAAAAGTCTCTATGATCTGTATACAAGAACCACCGGTCTTTCCAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGTCCCAGAGTAAGACATaGTTGAGACAAACCAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IVTQASLLMSFLIHFPHPSQSKT*LRQTSK Trigger: TTTACTGGTTTGTCTCAACAATGTCTTACTCTGGGA...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | ACCACCTACACAAATGATGCTCAACCGGGATCCTCTTaGGATGTGAGAAGTTCTTTAGGAAAACCTAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTYTNDAQPGSS*DVRSSLGKPNS Trigger: GCTATTAGGTTTTCCTAAAGAACTTCTCACATCTCAAGAGGATCCCGGTTGAGCATCATTTGTGTAGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | TGTATGAATATAAGAGGGAACACTGAGAAGTACGACTaGGATCTAGCCGCAAACAAACAGGAATCCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: CMNIRGNTEKYD*DLAANKQESKL Trigger: GAGTTTGGATTCCTGTTTGTTTGCGGCTAGATCGCAGTCGTACTTCTCAGTGTTCCCTCTTATATTCATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | TTTGGTGTACATAACATTTTACGTGCATTTCAGGTTTaGTGTTTCCCTCACTATACTGCACCCTCTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FGVHNILRAFQV*CFPHYTAPSPH Trigger: ATGGGGAGAGGGTGCAGTATAGTGAGGGAAACAGCAAACCTGAAATGCACGTAAAATGTTATGTACACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | ACTAGGAATCAGGATGTCAAACGTGCCAAGGGTATGTaGAATTACTGCAACACAATGATATACCCATCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TRNQDVKRAKGM*NYCNTMIYPSV Trigger: GACTGATGGGTATATCATTGTGTTGCAGTAATTGCACATACCCTTGGCACGTTTGACATCCTGATTCCTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | TTCAAGCATGCCTTATGTGACTACTCTGAGGTGCAGTaGCATTTTAGAAACCAAGATCTCTTCATCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FKHALCDYSEVQ*HFRNQDLFIWM Trigger: CATCCAGATGAAGAGATCTTGGTTTCTAAAATGCCACTGCACCTCAGAGTAGTCACATAAGGCATGCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGGGAAAACCTAATAGCTaGATTAATAATCACCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IVTQASLLMSFLIHFPHPGKPNS*INNHQH Trigger: GTGCTGGTGATTATTAATCAAGCTATTAGGTTTTCC...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATCATTCGTATGCCTCATaGTTGTCCAACACAGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: LVCKYLDGKARVDRYKMNHSYAS*LSNTDL Trigger: TAGGTCTGTGTTGGACAACAATGAGGCATACGAATG...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | GATCTTGTACTCCAACCTCATATCTACATTTCCCAATaGGGACCAAACACTGGGAGAAAAGAAAACTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DLVLQPHIYISQ*GPNTGRKENWV Trigger: TACCCAGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTTGGAGTACAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | CCCAGGCTAGCTATTGTCTTTGAGATGCATGGACTTTaGGTCTGGTTAATTTTGGTATGCAATGGTTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PRLAIVFEMHGL*VWLILVCNGSY Trigger: GTAAGAACCATTGCATACCAAAATTAACCAGACTCAAAGTCCATGCATCTCAAAGACAATAGCTAGCCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | GATTTCAAACACACTCTGAATAAGCTTAGCCAGCACTaGTTCTGGATTACTAAAGATGTCTCCAACCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DFKHTLNKLSQH*FWITKDVSNLL Trigger: AAGCAGGTTGGAGACATCTTTAGTAATCCAGAAGCAGTGCTGGCTAAGCTTATTCAGAGTGTGTTTGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
||
| 3UTR CCA 72 bp | GTGCAGTGGCATTTTAGAAACCAAGATCTCTTCATCTaGATGTATACTAATGTAGACACAGGCATCTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VQWHFRNQDLFI*MYTNVDTGISS Trigger: GCTTGAGATGCCTGTGTCTACATTAGTATACATCCAGATGAAGAGATCTTGGTTTCTAAAATGCCACTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | AAAATGCGCCTTCTGGAAACATATCACAATACTGTCTaGAAACACCGGGATGAGGAGTTGTGTAATTACACT | + |
|
Preference number: 3 (lower is better) Translates to: KMRLLETYHNTV*KHRDEELCNYT Trigger: AGTGTAATTACACAACTCCTCATCCCGGTGTTTCCAGACAGTATTGTGATATGTTTCCAGAAGGCGCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTGGACTGACTGCACTGTaGCTAAACATGGTGTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSGLTAL*LNMVLF Trigger: AAATAACACCATGTTTAGCAACAGTGCAGTCAGTCC...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | TATGTGAATTTCCTCAGAATTTTCCTCATGGATGGATaGCTTTCTGATTCACGTGCACATACAAACACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: YVNFLRIFLMDG*LSDSRAHTNTH Trigger: GTGGGTGTTTGTATGTGCACGTGAATCAGAAAGTCATCCATCCATGAGGAAAATTCTGAGGAAATTCACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | AGTATGTCAAATTTGCAAATCACAAAATGCGCCTTCTaGAAACATATCACAATACTGTCTGGAAACACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SMSNLQITKCAF*KHITILSGNTG Trigger: CCCGGTGTTTCCAGACAGTATTGTGATATGTTTCCAGAAGGCGCATTTTGTGATTTGCAAATTTGACATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAATCAGTGTTTTGTATACCAAAGTCCCCACTAGCAATCAACGAGTGTTCAACAACTGCAGGGAATTaGTTTATTGAGCATGAACGT | + |
|
Preference number: 3 (lower is better) Translates to: LKSVFCIPKSPLAINECSTTAGN*FIEHER Trigger: ACGTTCATGCTCAATAAACAAATTCCCTGCAGTTGT...TGAACACTCGTTGATTGCTAGTGGGGACTTTGGTATACAAAACACTGATTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | TCTACAGGTCTGAAAAGCAGGCTTTCAGTGCAAGCTTaGCTCCAAACTTGGAATATATACTATTCATTATCT | + |
|
Preference number: 3 (lower is better) Translates to: STGLKSRLSVQA*LQTWNIYYSLS Trigger: AGATAATGAATAGTATATATTCCAAGTTTGGAGGCAAGCTTGCACTGAAAGCCTGCTTTTCAGACCTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAATCAGTGTTTTGTATACCAAAGTCCCCACTAGCAATCAACGAGTGTTCAAACTTCAGAAATGCTTaGAGACTGGAGAATGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LKSVFCIPKSPLAINECSNFRNA*RLENEN Trigger: ATTCTCATTCTCCAGTCTCAAAGCATTTCTGAAGTT...TGAACACTCGTTGATTGCTAGTGGGGACTTTGGTATACAAAACACTGATTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCTCATATCTACATTTCCCAATGAGGACCAAACACTGGGAGAAAAGAAAACTCTGGACCTAGGCAGTTaGATAATGTTGATAACTATT | + |
|
Preference number: 3 (lower is better) Translates to: NLISTFPNEDQTLGEKKTLDLGS*IMLITI Trigger: AATAGTTATCAACATTATCAAACTGCCTAGGTCCAG...AGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCATTTGGAAAATTCTGTaGTGCGGAGTGCAAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLIWKIL*CGVQRQ Trigger: CTGTCTTTGCACTCCGCACAACAGAATTTTCCAAAT...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | TTCACAAAACTCTGTAGTTTGATTTCAAACACACTCTaGATAAGCTTAGCCAGCACTGCTTCTGGATTACTA | + |
|
Preference number: 3 (lower is better) Translates to: FTKLCSLISNTL*ISLASTASGLL Trigger: TAGTAATCCAGAAGCAGTGCTGGCTAAGCTTATTCAGAGTGTGTTTGAAATCAAACTACAGAGTTTTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
||
| 3UTR TCA 72 bp | CTTGTTGTCCATATACTAAGTCAACTGACCCATTACTaGAGACTTAATAAGCTAACCCAAACCATTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LVVHILSQLTHY*RLNKLTQTIPV Trigger: AACTGGAATGGTTTGGGTTAGCTTATTAAGTCTTCAGTAATGGGTCAGTTGACTTAGTATATGGACAACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR TCA 72 bp | AATGATATACCCATCAGTCCCTACAACAGCCAGCAGTaGAATATGAAAATACTAGGCCACTTATTTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NDIPISPYNSQQ*NMKILGHLFSF Trigger: AAAGGAAAATAAGTGGCCTAGTATTTTCATATTTCACTGCTGGCTGTTGTAGGGACTGATGGGTATATCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCATTGTAACCTTCTTGACCCTTGGATCAGACAGAACTTCATTTTTATTTCTCCTCAGTATGTCAAATTaGCAAATCACAAAATGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: FIVTFLTLGSDRTSFLFLLSMSN*QITKCA Trigger: GGCGCATTTTGTGATTTGCAAATTTGACATACTGAG...GAGAAATAAAAATGAAGTTCTGTCTGATCCAAGGGTCAAGAAGGTTACAATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR GCA 72 bp | CTAAAATTCTCAGTTCCTCTTAAAATAGAAGACTCCTaGATGTTTAGCCATCCCATCTCATTCAAGATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LKFSVPLKIEDS*MFSHPISFKIS Trigger: ACTAATCTTGAATGAGATGGGATGGCTAAACATGCAGGAGTCTTCTATTTTAAGAGGAACTGAGAATTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CCA 72 bp | AATTCTCAGAGCAGATTAGAATGTGTCTGCATTGTATaGATAACTAGCAGTCCAACAGAAATAACTCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NSQSRLECVCIV*ITSSPTEITQY Trigger: ATACTGAGTTATTTCTGTTGGACTGCTAGTTATCCATACAATGCAGACACATTCTAATCTGCTCTGAGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | TCGAGAACCTGTTCTGGCTCTCTCTTTTCTGAGGACAGCTATCTGGAAAGCCTCTTTCTGTGCCTCCACTaGACGTTGCCTAGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTCSGSLFSEDSYLESLFLCLH*TLPRCV Trigger: AACACACCTAGGCAACGTGCAGTGGAGGCACAGAAA...GAGGCTTTCCAGATAGCTGTCCTCAGAAAAGAGAGAGCCAGAACAGGTTCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CAA 72 bp | CCATACCACCCTGAAGATGCTCAATCACATCTCACCTaGGCAGTGAAGCGTGTTTGGGCCTGGTTTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PYHPEDAQSHLT*AVKRVWAWFVS Trigger: ACTTACAAACCAGGCCCAAACACGCTTCACTGCCAAGGTGAGATGTGATTGAGCATCTTCAGGGTGGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CAA 72 bp | ATCTGGAGTGTCTTCCAGAACGGACTACGTGAGACCTaGGGGAAAGTGGAAGATTTGGGCTTAGCACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IWSVFQNGLRET*GKVEDLGLALG Trigger: TCCTAGTGCTAAGCCCAAATCTTCCACTTTCCCCAAGGTCTCACGTAGTCCGTTCTGGAAGACACTCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CAA 72 bp | GGGATTATAACTAGAGAACAGTGGGTCAGGGTTGTGTaGCACATCTGGAGTGTCTTCCAGAACGGACTACGT | + |
|
Preference number: 4 (lower is better) Translates to: GIITREQWVRVV*HIWSVFQNGLR Trigger: ACGTAGTCCGTTCTGGAAGACACTCCAGATGTGCAACACAACCCTGACCCACTGTTCTCTAGTTATAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR TCA 90 bp | CACTACTTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCAGTCTCTGCCTCCTTAACTACCACTTCTTaGGATAGGAAAGTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HYLDQAGFELRNPPVSASLTTTS*DRKVSP Trigger: TGGGGAAACTTTCCTATCTCAAGAAGTGGTAGTTAA...GGAGGCAGAGACTGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTAAGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CAA 72 bp | GTGGGATTTTCCTCTGGATCCCAGAGTAAGACATTGTaGAGACAAACCAGTAAACCTACAGTGGGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGFSSGSQSKTL*RQTSKPTVGCE Trigger: CTCACACCCCACTGTAGGTTTACTGGTTTGTCTCAACAATGTCTTACTCTGGGATCCAGAGGAAAATCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTAAAATGAAGGAGGACTaGAGCCACCTCCCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSKMKED*SHLPHP Trigger: CGGATGAGGGAGGTGGCTGCAGTCCTCCTTCATTTT...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGTTTATCAGTACCTAAGTTAAACTCCATCAATTTGCTGGAAAGACCGGTGTTTCTGTGCCTCCACTaGACGTTGCCTAGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCLSVPKLNSINLLERPVFLCLH*TLPRCV Trigger: AACACACCTAGGCAACGTGCAGTGGAGGCACAGAAA...CACCGGTCTTTCCAGCAAATTGATGGAGTTTAACTTAGGTACTGATAAACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
||
| CDS-3UTR GCA 90 bp | TCGAGAACCTGTTCTGGCTCTCTCTTTTCTGAGGACAGCTATCTGGAAAGCCTCTTGAATGACGTCTGCTaGTTCCTTTATCTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTCSGSLFSEDSYLESLLNDVC*FLYLFR Trigger: TCTGAAAAGATAAAGGAAGCAGCAGACGTCATTCAA...GAGGCTTTCCAGATAGCTGTCCTCAGAAAAGAGAGAGCCAGAACAGGTTCTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTGGAAAGCAACCTGGTTaGTTTTCTGGAGCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSGKQPG*FSGAPV Trigger: TACAGGAGCTCCAGAAAAGCAACCAGGTTGCTTTCC...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCAAAATGAAGGAGGACTaGAGCCACCTCCCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTKMKED*SHLPHP Trigger: CGGATGAGGGAGGTGGCTGCAGTCCTCCTTCATTTT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTCGCAAATTGCAAGCATaGCACCCATACAACTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSRKLQA*HPYNYR Trigger: CCTATAGTTGTATGGGTGGCATGCTTGCAATTTGCG...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGGGCAGGTTTCTTTGGTAAGGTTGTTAATACCCTCTCTTTACACTTGAGCAGTTGTACAAAGGAGTaGAGTATGTTCTTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGAGFFGKVVNTLSLHLSSCTKE*SMFLSR Trigger: TCTGGACAAGAACATACTCCACTCCTTTGTACAACT...GCTCAAGTGTAAAGAGAGGGTATTAACAACCTTACCAAAGAAACCTGCCCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| 3UTR CAA 72 bp | TATCACAATACTGTCTGGAAACACCGGGATGAGGAGTaGTGTAATTACACTTTCCATGTAATGGTTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YHNTVWKHRDEE*CNYTFHVMVPR Trigger: CCTAGGAACCATTACATGGAAAGTGTAATTACACAACTCCTCATCCCGGTGTTTCCAGACAGTATTGTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | CTTAAATCAGTGTTTTGTATACCAAAGTCCCCACTAGCAATCAACGAGTGTTCATTTCATCAATTTCTGTaGCTCCACTGCACGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSVFCIPKSPLAINECSFHQFL*LHCTLP Trigger: AGGCAACGTGCAGTGGAGGCACAGAAATTGATGAAA...TGAACACTCGTTGATTGCTAGTGGGGACTTTGGTATACAAAACACTGATTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTCTTGAATACCTCCTGTaGCAATGGATCTCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSLEYLL*QWISFG Trigger: ACCAAAAGAGATCCATTGGCACAGGAGGTATTCAAG...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTTTGTAAGTACTTGGATGGGAAAGCTAGGGTGGATAGGTACAAAATGAATTCCTTAGCTTCCTTCTaGCACTGTTGTTCTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCKYLDGKARVDRYKMNSLASF*HCCSNF Trigger: GAAATTAGAACAACAGTGTCAGAAGGAAGCTAAGGA...ATTCATTTTGTACCTATCCACCCTAGCTTTCCCATCCAAGTACTTACAAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR TCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCTGCTTGTTCACTCGCTaGCAGAGTATTGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTCLFTR*QSIAAS Trigger: AGATGCAGCAATACTCTGTCAGCGAGTGAACAAGCA...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
||
| CDS-3UTR TCA 90 bp | AACCTCATATCTACATTTCCCAATGAGGACCAAACACTGGGAGAAAAGAAAACTGGATCAGAAAGCCTATaGCATCTTTCAAAGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLISTFPNEDQTLGEKKTGSESL*HLSKAC Trigger: ACAAGCCTTTGAAAGATGTCATAGGCTTTCTGATCC...AGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | CAGATCATAGAGACTTTTAAGATACTGCTCAGCATCAGATTTCCTACATTCTTCTTTCATCAATTTCTGTaGCTCCACTGCACGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIIETFKILLSIRFPTFFFHQFL*LHCTLP Trigger: AGGCAACGTGCAGTGGAGGCACAGAAATTGATGAAA...GAAGAATGTAGGAAATCTGATGCTGAGCAGTATCTTAAAAGTCTCTATGATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160386.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCGCTGCTTCCTTTATCTaGTTGCTTTTCTGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTAASFI*LLFWSS Trigger: GGAGCTCCAGAAAAGCAACCAGATAAAGGAAGCAGC...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161504.8 |
||
| 3UTR CAA 72 bp | CTCTACAGGTCTGAAAAGCAGGCTTTCAGTGCAAGCTaGCCTCCAAACTTGGAATATATACTATTCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: LYRSEKQAFSAS*PPNLEYILFII Trigger: GATAATGAATAGTATATATTCCAAGTTTGGAGGCAAGCTTGCACTGAAAGCCTGCTTTTCAGACCTGTAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR TCA 90 bp | AACCTCATATCTACATTTCCCAATGAGGACCAAACACTGGGAGAAAAGAAAACTCTTTCTTTCAAATCTTaGATACCTCCTGTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NLISTFPNEDQTLGEKKTLSFKS*IPPVPM Trigger: CATTGGCACAGGAGGTATTCAAGATTTGAAAGAAAG...AGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCCGCAAATTGCAAGCATaGCACCCATACAACTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTRKLQA*HPYNYR Trigger: CCTATAGTTGTATGGGTGGCATGCTTGCAATTTGCG...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
||
| 3UTR CAA 72 bp | TCATTCAAGATTAGTCTTAAGGGACTGACTGCACTGTaGCTAAACATGGTGTTATTTCTCACATACACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFKISLKGLTAL*LNMVLFLTYTV Trigger: AACGGTGTATGTGAGAAATAACACCATGTTTAGCAACAGTGCAGTCAGTCCCTTAAGACTAATCTTGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
||
| CDS-3UTR TCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCGGATCAGAAAGCCTATaGCATCTTTCAAAGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTGSESL*HLSKAC Trigger: ACAAGCCTTTGAAAGATGTCATAGGCTTTCTGATCC...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCCTTGAATACCTCCTGTaGCAATGGATCTCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTLEYLL*QWISFG Trigger: ACCAAAAGAGATCCATTGGCACAGGAGGTATTCAAG...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCCTTCCTTTATCTGGTTaGTTTTCTGGAGCTCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTLPLSG*FSGAPV Trigger: TACAGGAGCTCCAGAAAAGCAACCAGATAAAGGAAG...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161504.8 |
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| CDS-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCTTGAATGACGTCTGCTaGTTCCTTTATCTGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTLNDVC*FLYLVA Trigger: AGCAACCAGATAAAGGAAGCAGCAGACGTCATTCAA...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161504.8 |
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| CDS-3UTR TCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCTCCTTAGCTTCCTTCTaGCACTGTTGTTCTAATTTC | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTSLASF*HCCSNF Trigger: GAAATTAGAACAACAGTGTCAGAAGGAAGCTAAGGA...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR TCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCCTTTCTTTCAAATCTTaGATACCTCCTGTGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTLSFKS*IPPVPM Trigger: CATTGGCACAGGAGGTATTCAAGATTTGAAAGAAAG...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR TCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCTTAACTACCACTTCTTaGGATAGGAAAGTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTLTTTS*DRKVSP Trigger: TGGGGAAACTTTCCTATCTCAAGAAGTGGTAGTTAA...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCAAGCTTAGCCAGCACTaGTTCTGGATTACTAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTKLSQH*FWITKD Trigger: ATCTTTAGTAATCCAGAAGCAGTGCTGGCTAAGCTT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR GCA 90 bp | AACCTCATATCTACATTTCCCAATGAGGACCAAACACTGGGAGAAAAGAAAACTAGACTTTTAAGATACTaGTCAGCATCAGATTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: NLISTFPNEDQTLGEKKTRLLRY*SASDFL Trigger: TAGGAAATCTGATGCTGAGCAGTATCTTAAAAGTCT...AGTTTTCTTTTCTCCCAGTGTTTGGTCCTCATTGGGAAATGTAGATATGAGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| CDS-3UTR CCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCAGTTGTACAAAGGAGTaGAGTATGTTCTTGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTSCTKE*SMFLSR Trigger: TCTGGACAAGAACATACTCCACTCCTTTGTACAACT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR GCA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCAGACTTTTAAGATACTaGTCAGCATCAGATTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTRLLRY*SASDFL Trigger: TAGGAAATCTGATGCTGAGCAGTATCTTAAAAGTCT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR CAA 90 bp | ATAGTGACGCAGGCATCACTTCTGATGTCCTTTCTGATACATTTCCCACATCCGTGGAAAGCAACCTGGTaGCTTTTCTGGAGCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: IVTQASLLMSFLIHFPHPWKATW*LFWSSC Trigger: ACAGGAGCTCCAGAAAAGCAACCAGGTTGCTTTCCA...CGGATGTGGGAAATGTATCAGAAAGGACATCAGAAGTGATGCCTGCGTCACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| CDS-3UTR CAA 90 bp | TCGAGAACCTGTTCTGGCTCTCTCTTTTCTGAGGACAGCTATCTGGAAAGCCTCATAGTCAGCACGAAGTaGTACAAAGGAGTGGAGTAT | + |
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Preference number: 5 (lower is better) Translates to: SRTCSGSLFSEDSYLESLIVSTK*YKGVEY Trigger: ATACTCCACTCCTTTGTACAACTTCGTGCTGACTAT...GAGGCTTTCCAGATAGCTGTCCTCAGAAAAGAGAGAGCCAGAACAGGTTCTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| CDS-3UTR CAA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCGACCTCCCCTCTTCTTaGGGCACTTGTAAACTCCTG | + |
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Preference number: 5 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTDLPSS*GTCKLL Trigger: CAGGAGTTTACAAGTGCCCAAAGAAGAGGGGAGGTC...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR CAA 90 bp | ATTTGGAAGTCCACCATAGGAAGTCAGTTCTTTAGAACAGGTTCTATCCAGTCTAATCAGATGCAGTTTTaGAATGACGTCTGCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: IWKSTIGSQFFRTGSIQSNQMQF*NDVCCF Trigger: GAAGCAGCAGACGTCATTCAAAAACTGCATCTGATT...AGACTGGATAGAACCTGTTCTAAAGAACTGACTTCCTATGGTGGACTTCCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162175.9 |
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| CDS-3UTR CAA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCGCTTCCTTTATCTGGTaGCTTTTCTGGAGCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTASFIW*LFWSSC Trigger: ACAGGAGCTCCAGAAAAGCAACCAGATAAAGGAAGC...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161504.8 |
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| CDS-3UTR CAA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCAATCAGATGCAGTTTTaGAATGACGTCTGCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTNQMQF*NDVCCF Trigger: GAAGCAGCAGACGTCATTCAAAAACTGCATCTGATT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR CAA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCTTAAACTCCATCAATTaGCTGGAAAGACCGGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTLNSIN*LERPVV Trigger: AACCACCGGTCTTTCCAGCAAATTGATGGAGTTTAA...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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| CDS-3UTR CAA 90 bp | ATGTTAAAAACCAAGAACCAGAACACTGGTGAATTTCATTCATTTTCTGACACCATAGTCAGCACGAAGTaGTACAAAGGAGTGGAGTAT | + |
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Preference number: 5 (lower is better) Translates to: MLKTKNQNTGEFHSFSDTIVSTK*YKGVEY Trigger: ATACTCCACTCCTTTGTACAACTTCGTGCTGACTAT...GGTGTCAGAAAATGAATGAAATTCACCAGTGTTCTGGTTCTTGGTTTTTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161504.8 ENSMUST00000162175.9 |
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