Pregenerated sensors for EXOC3L4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021280Ensembl transcript IDs: ENSMUST00000072646.8, ENSMUST00000220852.2, ENSMUST00000221144.2, ENSMUST00000222437.2, ENSMUST00000222897.2, ENSMUST00000223050.2, ENSMUST00000223431.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTaGGCAAGACCAACGTGGTGTCTGAGGCTAGGGACCCAGGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RAQVPSKRLRAVYPF*ARPTWCLRLGTQGV Trigger: CACACCCTGGGTCCCTAGCCTCAGACACCACGTTGGTCTTGCCCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR TCA 90 bp | ACTCACAGAGGCCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTTaGGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCT | + |
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Preference number: 1 (lower is better) Translates to: THRGQRGRLVLWNWS*GRLFIALWVLGAQP Trigger: AGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGGCCTCTGTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR CAA 90 bp | TTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTaGGGGTCAGTCATGGAGAGGGTGACAGATCCTCGGCCAACGAGG | + |
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Preference number: 2 (lower is better) Translates to: FSAGGRARVTHWAPN*GSVMERVTDPRPTR Trigger: CCTCGTTGGCCGAGGATCTGTCACCCTCTCCATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTGGGAGCACAACCTTTaGAGGGAGAGCCAAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VLTRAQVPSKRLRAVYPFWEHNL*RESQGS Trigger: GGAGCCTTGGCTCTCCCTTCAAAGGTTGTGCTCCCA...GAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR CAA 90 bp | CACTCACAGAGGCCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTaGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACC | + |
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Preference number: 2 (lower is better) Translates to: HSQRPERAFGPLELE*RTVVYRPVGAGSTT Trigger: GGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGGCCTCTGTGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGAGAGGGGTAGGGCCAGAGTaGCTCACTGGGCTCCCAACT | + |
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Preference number: 2 (lower is better) Translates to: RTVVYRPVGAGSTTFEGRGVGPE*LTGLPT Trigger: AGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCC...TCTCCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR CCA 90 bp | GGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGAGAGGAATGCCTCATCTCCTaGCTCCTCTGGCTGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GRLFIALWVLGAQPLKGEECLIS*LLWLSS Trigger: GCTGCTCAGCCAGAGGAGCCAGGAGATGAGGCATTC...CTCTCCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGCCAAGGCTCCTGTTTTaGTCTGCTGAGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LRTVVYRPVGAGSTTFEGPRLLF*SAEAGR Trigger: CCTGCCTGCCTCAGCAGATCAAAACAGGAGCCTTGG...CCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCGGTCCTCCCATACATTCAATCCAGCATCACCTCTCCCAACCAGCTTAGCTATCTCCTGGCTCCTCTaGCTGAGCAGCCAGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ARSSHTFNPASPLPTSLAISWLL*LSSQAA Trigger: AGCTGCCTGGCTGCTCAGCCAGAGGAGCCAGGAGAT...AGCTAAGCTGGTTGGGAGAGGTGATGCTGGATTGAATGTATGGGAGGACCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR TCA 90 bp | GGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGAGAGGAGCAGCCAGGCAGCTaGGACCAAAAATTCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: GRLFIALWVLGAQPLKGEEQPGS*DQKFHV Trigger: GACATGGAATTTTTGGTCTCAGCTGCCTGGCTGCTC...CTCTCCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGATCTCCTGGCTCCTCTaGCTGAGCAGCCAGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: FTFIFRILSFALQCGCAEISWLL*LSSQAA Trigger: AGCTGCCTGGCTGCTCAGCCAGAGGAGCCAGGAGAT...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGGGGTAGGGCCAGAGTaGCTCACTGGGCTCCCAACT | + |
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Preference number: 2 (lower is better) Translates to: FNSHLFLESSASHYSVDVGVGPE*LTGLPT Trigger: AGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGAAGCCTTCCCTGGCCTaGAGTCCTGAAAGGAGACTC | + |
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Preference number: 2 (lower is better) Translates to: FNSHLFLESSASHYSVDVKPSLA*SPERRL Trigger: GAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTT...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| 3UTR TCA 72 bp | ACTGGGCTCCCAACTTGGGGTCAGTCATGGAGAGGGTaGCAGATCCTCGGCCAACGAGGCTCCTGCTCGCCC | + |
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Preference number: 3 (lower is better) Translates to: TGLPTWGQSWRG*QILGQRGSCSP Trigger: GGGCGAGCAGGAGCCTCGTTGGCCGAGGATCTGTCACCCTCTCCATGACTGACCCCAAGTTGGGAGCCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| 3UTR TCA 72 bp | CGGTGCTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTaGGGGCTGTCTACCCCTTCTGGGCAAGACCAACGT | + |
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Preference number: 3 (lower is better) Translates to: RCSRGLRCLARG*GLSTPSGQDQR Trigger: ACGTTGGTCTTGCCCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAGCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR CCA 72 bp | GGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTaGGCTCCCAACTTGGGGTCAGTCATGGAGAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: GFSAGGRARVTH*APNLGSVMERV Trigger: CACCCTCTCCATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| 3UTR CCA 72 bp | GTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTaGGCAAGACCAACGTGGTGTCTGAGGCTAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: VPSKRLRAVYPF*ARPTWCLRLGT Trigger: GGTCCCTAGCCTCAGACACCACGTTGGTCTTGCCCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR CAA 90 bp | CCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTGGGCAAGACCAACGTGGTGTCTGGGAGCACAACCTTaGAAGGGAGAGCCAAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: PSKRLRAVYPFWARPTWCLGAQP*KGEPRL Trigger: GAGCCTTGGCTCTCCCTTCAAAGGTTGTGCTCCCAG...ACACCACGTTGGTCTTGCCCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTGGGGGTCTGCCTTTGCTTaGTTGTTGCTTTTAAAATGT | + |
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Preference number: 3 (lower is better) Translates to: LTRAQVPSKRLRAVYPFWGSAFA*LLLLKC Trigger: ACATTTTAAAAGCAACAACAAAGCAAAGGCAGACCC...CCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR-3UTR CAA 90 bp | AGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGAGATTAGCTTGCCCAACCTaGTACACTATTTTAATTCAC | + |
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Preference number: 3 (lower is better) Translates to: RTVVYRPVGAGSTTFEGRLACPT*YTILIH Trigger: GTGAATTAAAATAGTGTACAAGGTTGGGCAAGCTAA...TCTCCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| 3UTR GCA 72 bp | TTCAATCCAGCATCACCTCTCCCAACCAGCTTAGCTTaGCCAACCTTGTACACTATTTTAATTCACATTTAT | + |
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Preference number: 3 (lower is better) Translates to: FNPASPLPTSLA*PTLYTILIHIY Trigger: ATAAATGTGAATTAAAATAGTGTACAAGGTTGGGCAAGCTAAGCTGGTTGGGAGAGGTGATGCTGGATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| CDS-3UTR TCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGCGCGCTCCTGAGCGCTaGGACGCACCGCGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLRAPER*DAPRPP Trigger: GGGAGGACGCGGTGCGTCTCAGCGCTCAGGAGCGCG...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCCGCGCTCCTGAGCGCTaGGACGCACCGCGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVRAPER*DAPRPP Trigger: GGGAGGACGCGGTGCGTCTCAGCGCTCAGGAGCGCG...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGGGGGCAGCGGCTCGGTaGGCAGCGCCAAGTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMGAAAR*AAPSLG Trigger: CCCCAGACTTGGCGCTGCCCACCGAGCCGCTGCCCC...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGGGGCAGCGGCTCGGTaGGCAGCGCCAAGTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVGAAAR*AAPSLG Trigger: CCCCAGACTTGGCGCTGCCCACCGAGCCGCTGCCCC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGGGCAGCGCCAAGTCTaGGGCGCCCAGGAAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVGQRQV*GAQEVR Trigger: CCTGACTTCCTGGGCGCCCCAGACTTGGCGCTGCCC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTGGGGCCTCAGCACCTaGCCCAGGTATTCGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVWGLST*PRYSRT Trigger: GGTCCGCGAATACCTGGGGCAGGTGCTGAGGCCCCA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGTGGGGCCTCAGCACCTaGCCCAGGTATTCGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMWGLST*PRYSRT Trigger: GGTCCGCGAATACCTGGGGCAGGTGCTGAGGCCCCA...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGTGGGGCCTCAGCACCTaGCCCAGGTATTCGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLWGLST*PRYSRT Trigger: GGTCCGCGAATACCTGGGGCAGGTGCTGAGGCCCCA...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCCCACTGAACCTCTCGTaGGGCCTCAGCACCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVPLNLS*GLSTCP Trigger: GGGGCAGGTGCTGAGGCCCCACGAGAGGTTCAGTGG...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGCCACTGAACCTCTCGTaGGGCCTCAGCACCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLPLNLS*GLSTCP Trigger: GGGGCAGGTGCTGAGGCCCCACGAGAGGTTCAGTGG...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGTGTGAGGGGAGCCTaGTCTCGTGGGCAGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLGVRGA*SRGQPS Trigger: TGAGGGCTGCCCACGAGACCAGGCTCCCCTCACACC...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | CTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTGGGGTGTGAGGGGAGCCTaGTCTCGTGGGCAGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LTRAQVPSKRLRAVYPFWGVRGA*SRGQPS Trigger: TGAGGGCTGCCCACGAGACCAGGCTCCCCTCACACC...CCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCCTCTGTCCCAGTGGCTaGCTGCCTGCTGACGCCATC | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVLCPSG*LPADAI Trigger: GATGGCGTCAGCAGGCAGGCAGCCACTGGGACAGAG...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGCTCTGTCCCAGTGGCTaGCTGCCTGCTGACGCCATC | + |
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Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLLCPSG*LPADAI Trigger: GATGGCGTCAGCAGGCAGGCAGCCACTGGGACAGAG...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGCCCGGGGATGACTTTTaGGCCTGCCTGCTGTACGCG | + |
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Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLPGDDF*ACLLYA Trigger: CGCGTACAGCAGGCAGGCGCAAAAGTCATCCCCGGG...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTCAGCATGCCCAGGCTaGGTCTCAAGCTGCCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVSACPG*VSSCPR Trigger: ACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGCGCCTGAACAGGCCTaGGTCCTCCTTGGGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVAPEQA*VLLGLV Trigger: CACAAGCCCAAGGAGGACCCAGGCCTGTTCAGGCGC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGACCTTCTGCAGGTCGTaGCGAACCACACCGCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLTFCRS*RTTPPS Trigger: GCTCGGCGGTGTGGTTCGCCACGACCTGCAGAAGGT...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCAGGGCAGCGCCAAGTCTaGGGCGCCCAGGAAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPGQRQV*GAQEVR Trigger: CCTGACTTCCTGGGCGCCCCAGACTTGGCGCTGCCC...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGGGGAGCCTGGTCTCGTaGGCAGCCCTCAGCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMGSLVS*AALSKS Trigger: AGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCC...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGGGAGCCTGGTCTCGTaGGCAGCCCTCAGCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVGSLVS*AALSKS Trigger: AGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCCCCGTCTCAAGGACCTaGACAGGAAACGGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVPVSRT*TGNGSC Trigger: GCAGCTCCCGTTTCCTGTTCAGGTCCTTGAGACGGG...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGGGGTCTGCTTCAGCATaGCCAGGCTGGGTCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMGSASA*PGWVSS Trigger: GCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCC...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGTCCGGAAGAGGGTCTaGTTCAGCATGCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVVRKRV*FSMPRL Trigger: CAGCCTGGGCATGCTGAAGCAGACCCTCTTCCGGAC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGGTACCGCAGGGCCTTaGGGATGCCCAGCAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVGTAGP*GCPAVK Trigger: CTTAACTGCTGGGCATCCCCAAGGCCCTGCGGTACC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGAGCTCCTGTAGACGCTaGGCCACAGCGCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLSSCRR*ATALWK Trigger: CTTCCACAGCGCTGTGGCCCAGCGTCTACAGGAGCT...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCACCACTGAACCTCTCGTaGGGCCTCAGCACCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPPLNLS*GLSTCP Trigger: GGGGCAGGTGCTGAGGCCCCACGAGAGGTTCAGTGG...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTCCTCGAAGAGCACGTaGTGTGAGGGGAGCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVSSKST*CEGSLV Trigger: GACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| 3UTR CAA 72 bp | GGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTaGGGGTCAGTCATGGAGAGGGTGACAGATCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRARVTHWAPN*GSVMERVTDPR Trigger: CCGAGGATCTGTCACCCTCTCCATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGCAGGGCCTTGGGGATaGCCAGCAGTTAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVAGPWG*PAVKPS Trigger: TGAAGGCTTAACTGCTGGGCATCCCCAAGGCCCTGC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGCAGGGCCTTGGGGATaGCCAGCAGTTAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLAGPWG*PAVKPS Trigger: TGAAGGCTTAACTGCTGGGCATCCCCAAGGCCCTGC...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCGCAGGGCCTTGGGGATaGCCAGCAGTTAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTRAQVPSKRLRAVYPFAGPWG*PAVKPS Trigger: TGAAGGCTTAACTGCTGGGCATCCCCAAGGCCCTGC...GAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGGTCCCAGTGGCTGCCTaGCTGCTGACGCCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLELELRTVVYRPVGAGVPVAA*LLTPSV Trigger: CACAGATGGCGTCAGCAGGCAGGCAGCCACTGGGAC...CCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCACTCTGTCCCAGTGGCTaGCTGCCTGCTGACGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPLCPSG*LPADAI Trigger: GATGGCGTCAGCAGGCAGGCAGCCACTGGGACAGAG...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGCTGCAGTGTCTCCTGTaGCAGTGGTGGGGTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLLQCLL*QWWGHM Trigger: CATGTGACCCCACCACTGGCACAGGAGACACTGCAG...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGCGGACCACAAAACGGTaGACCTCCTGCAGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMRTTKR*TSCSVS Trigger: GGAGACACTGCAGGAGGTGCACCGTTTTGTGGTCCG...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCATCAGCATGCCCAGGCTaGGTCTCAAGCTGCCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPSACPG*VSSCPR Trigger: ACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGA...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGAGAGGGCAGCGCCAAGTCTaGGGCGCCCAGGAAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTVVYRPVGAGSTTFEGRGQRQV*GAQEVR Trigger: CCTGACTTCCTGGGCGCCCCAGACTTGGCGCTGCCC...TCTCCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGCAGCCACAGACAGGATaGCTTGGTCCAGCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLQPQTG*LGPATW Trigger: CCAAGTGGCTGGACCAAGCCATCCTGTCTGTGGCTG...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCAGGGTCTGCTTCAGCATaGCCAGGCTGGGTCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPGSASA*PGWVSS Trigger: GCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCC...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGTCAGCTACCAGCATGTaGACATCGATGGACAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLSATSM*TSMDRG Trigger: GCCCCTGTCCATCGATGTGCACATGCTGGTAGCTGA...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCAAACGGTGCACCTCCTaGAGTGTCTCCTGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVKRCTS*SVSCAS Trigger: ACTGGCACAGGAGACACTGCAGGAGGTGCACCGTTT...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGTCAGAGCCCAAGCCCTaGAAGGTGTTGCTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMSEPKP*KVLLMA Trigger: GGCCATTAGCAACACCTTCCAGGGCTTGGGCTCTGA...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCATCCTCGAAGAGCACGTaGTGTGAGGGGAGCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPSSKST*CEGSLV Trigger: GACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGA...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| 3UTR CAA 72 bp | AGGCCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTaGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPERAFGPLELE*RTVVYRPVGAG Trigger: CCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGTACCATTCGCTCACTaGCTTCGACGCCAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVVPFAH*LRRQKS Trigger: GCTTTTCTGGCGTCGAAGGCAGTGAGCGAATGGTAC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCACTGCAGTGTCTCCTGTaGCAGTGGTGGGGTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPLQCLL*QWWGHM Trigger: CATGTGACCCCACCACTGGCACAGGAGACACTGCAG...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGCTGCAGTGTCTCCTGTaGCAGTGGTGGGGTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: GPLELELRTVVYRPVGAGLQCLL*QWWGHM Trigger: CATGTGACCCCACCACTGGCACAGGAGACACTGCAG...CCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGTTGAAGTTCTCAGGCTaGTCCGGAAGAGGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLLKFSG*SGRGSA Trigger: AGCAGACCCTCTTCCGGACCAGCCTGAGAACTTCAA...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTTGAAGTTCTCAGGCTaGTCCGGAAGAGGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVLKFSG*SGRGSA Trigger: AGCAGACCCTCTTCCGGACCAGCCTGAGAACTTCAA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAACCCGGGGATGACTTTTaGGCCTGCCTGCTGTACGCG | + |
|
Preference number: 4 (lower is better) Translates to: ELRTVVYRPVGAGSTTFEPGDDF*ACLLYA Trigger: CGCGTACAGCAGGCAGGCGCAAAAGTCATCCCCGGG...TTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCATCAGCTACCAGCATGTaGACATCGATGGACAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPSATSM*TSMDRG Trigger: GCCCCTGTCCATCGATGTGCACATGCTGGTAGCTGA...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCAAAACGGTGCACCTCCTaGAGTGTCTCCTGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPKRCTS*SVSCAS Trigger: ACTGGCACAGGAGACACTGCAGGAGGTGCACCGTTT...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | ACACTCACAGAGGCCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTTGAGGACCGGACCACAAAACGGTaGACCTCCTGCAGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTEAREGVWSSGTGVEDRTTKR*TSCSVS Trigger: GGAGACACTGCAGGAGGTGCACCGTTTTGTGGTCCG...GTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGGCCTCTGTGAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGATTTACTTTCTGCCTaGGGTTCCAGATCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVDLLSA*GSRSSA Trigger: GGCTGAGGATCTGGAACCCCAGGCAGAAAGTAAATC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAACCTTCTGCAGGTCGTaGCGAACCACACCGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELRTVVYRPVGAGSTTFETFCRS*RTTPPS Trigger: GCTCGGCGGTGTGGTTCGCCACGACCTGCAGAAGGT...TTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTCTCCAGTTCCTTTATaGTTCCTGGGAACCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVSPVPL*FLGTWP Trigger: TGGCCAGGTTCCCAGGAACCATAAAGGAACTGGAGA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGTCTCCAGTTCCTTTATaGTTCCTGGGAACCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMSPVPL*FLGTWP Trigger: TGGCCAGGTTCCCAGGAACCATAAAGGAACTGGAGA...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGTCTGGAAGCTATTGGTaGCAGCCACTAGGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMSGSYW*QPLGVS Trigger: AGAAACCCCTAGTGGCTGCCACCAATAGCTTCCAGA...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCGTTTCTGGAAGCTATTaGTGGCAGCCACTAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLTRAQVPSKRLRAVYPFVSGSY*WQPLGV Trigger: AACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAAC...GAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGAGAGCAGCCACAGACAGGATaGCTTGGTCCAGCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLFIALWVLGAQPLKGEQPQTG*LGPATW Trigger: CCAAGTGGCTGGACCAAGCCATCCTGTCTGTGGCTG...CTCTCCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTGGGCCCTCAGCAAGTCTTaGGTGTGTTGCAAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTRAQVPSKRLRAVYPFWALSKS*VCCKRF Trigger: GAATCTCTTGCAACACACCCAAGACTTGCTGAGGGC...CCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGAAGTGTGTCCTGTGTaGGCCAGCTCTTGGTATATA | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLEVCPV*ASSWYI Trigger: TATATACCAAGAGCTGGCTCACACAGGACACACTTC...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGGTCACATGCTCAAGATaGTGTGCAAAGTCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMVTCSR*CAKSTT Trigger: AGTGGTGGACTTTGCACATCATCTTGAGCATGTGAC...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGTCACATGCTCAAGATaGTGTGCAAAGTCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLVTCSR*CAKSTT Trigger: AGTGGTGGACTTTGCACATCATCTTGAGCATGTGAC...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GCTCGGTCCTCCCATACATTCAATCCAGCATCACCTCTCCCAACCAGCTTAGCTGGGTCTGCTTCAGCATaGCCAGGCTGGGTCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARSSHTFNPASPLPTSLAGSASA*PGWVSS Trigger: GCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCC...AGCTAAGCTGGTTGGGAGAGGTGATGCTGGATTGAATGTATGGGAGGACCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGAAACGGTGCACCTCCTaGAGTGTCTCCTGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDGCLSPCGCWEKRCTS*SVSCAS Trigger: ACTGGCACAGGAGACACTGCAGGAGGTGCACCGTTT...CTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGAAGTCTTGGGTGTGTTaGAAGAGATTCTGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMKSWVC*KRFWFR Trigger: CCGGAACCAGAATCTCTTGCAACACACCCAAGACTT...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGGCTCTTTCATACTGTTaGACTTCCAGGTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMALSYC*TSRWSQ Trigger: CTGTGACCACCTGGAAGTCCAACAGTATGAAAGAGC...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GCTCGGTCCTCCCATACATTCAATCCAGCATCACCTCTCCCAACCAGCTTAGCTGGTACCGCAGGGCCTTaGGGATGCCCAGCAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSSHTFNPASPLPTSLAGTAGP*GCPAVK Trigger: CTTAACTGCTGGGCATCCCCAAGGCCCTGCGGTACC...AGCTAAGCTGGTTGGGAGAGGTGATGCTGGATTGAATGTATGGGAGGACCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAAGCTCCTGTAGACGCTaGGCCACAGCGCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELRTVVYRPVGAGSTTFESSCRR*ATALWK Trigger: CTTCCACAGCGCTGTGGCCCAGCGTCTACAGGAGCT...TTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGAAGCCTTTTCAAACCTaGGCACAAAGAGACAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGFSAGGRARVTHWAPNLKPFQT*AQRDRA Trigger: CGCTCTGTCTCTTTGTGCCCAGGTTTGAAAAGGCTT...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGAAGCCTTTTCAAACCTaGGCACAAAGAGACAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMKPFQT*AQRDRA Trigger: CGCTCTGTCTCTTTGTGCCCAGGTTTGAAAAGGCTT...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGTTCCTTTATGGTTCCTaGGAACCTGGCCAGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRARVTHWAPNLGSVMFLYGS*EPGQKT Trigger: AGTCTTCTGGCCAGGTTCCCAGGAACCATAAAGGAA...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGAGAATGGCCAGAATGTaGTCTCGCCTGATGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDGCLSPCGCWERMARM*SRLMSG Trigger: CCCGGACATCAGGCGAGACCACATTCTGGCCATTCT...CTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCCGATTCTGTTCCAGCTaGAAGATGCTGTCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTRAQVPSKRLRAVYPFRFCSS*KMLSKQ Trigger: CTGTTTTGACAGCATCTTGCAGCTGGAACAGAATCG...GAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGTCAGAGCCCAAGCCCTaGAAGGTGTTGCTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRTVVYRPVGAGSTTFEGSEPKP*KVLLMA Trigger: GGCCATTAGCAACACCTTCCAGGGCTTGGGCTCTGA...CCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCAGAAGTGTGTCCTGTGTaGGCCAGCTCTTGGTATATA | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPEVCPV*ASSWYI Trigger: TATATACCAAGAGCTGGCTCACACAGGACACACTTC...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCAGTCACATGCTCAAGATaGTGTGCAAAGTCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPVTCSR*CAKSTT Trigger: AGTGGTGGACTTTGCACATCATCTTGAGCATGTGAC...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAATCAGCTACCAGCATGTaGACATCGATGGACAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELRTVVYRPVGAGSTTFESATSM*TSMDRG Trigger: GCCCCTGTCCATCGATGTGCACATGCTGGTAGCTGA...TTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAACCAGCTGCCTTCACATaGTCAGCTACCAGCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELRTVVYRPVGAGSTTFEPAAFT*SATSMC Trigger: GCACATGCTGGTAGCTGAGCATGTGAAGGCAGCTGG...TTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAAGTCTTGGGTGTGTTaGAAGAGATTCTGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLELELRTVVYRPVGAGKSWVC*KRFWFR Trigger: CCGGAACCAGAATCTCTTGCAACACACCCAAGACTT...CCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGGGTTGAAGTTCTCAGGCTaGTCCGGAAGAGGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTVVYRPVGAGSTTFEGLKFSG*SGRGSA Trigger: AGCAGACCCTCTTCCGGACCAGCCTGAGAACTTCAA...CCCTTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGGGGGCAGCGGCTCGGTaGGCAGCGCCAAGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEGAAAR*AAPSLG Trigger: CCCCAGACTTGGCGCTGCCCACCGAGCCGCTGCCCC...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCATGTCAAAACAGCTTGTaGTCTTGGTCTCTAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPCQNSL*SWSLGS Trigger: GCTTCCTAGAGACCAAGATCACAAGCTGTTTTGACA...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCACAGAGGCCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTTGAGGACAAGCCTTTTCAAACCTaGGCACAAAGAGACAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLTEAREGVWSSGTGVEDKPFQT*AQRDRA Trigger: CGCTCTGTCTCTTTGTGCCCAGGTTTGAAAAGGCTT...GTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGGCCTCTGTGAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCTCTCCAGTTCCTTTATaGTTCCTGGGAACCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PERAFGPLELELRTVVYRSPVPL*FLGTWP Trigger: TGGCCAGGTTCCCAGGAACCATAAAGGAACTGGAGA...GCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGTGGAGCAAATGTTTCTaGAAGCTATTGGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDGCLSPCGCWEWSKCF*KLLVAA Trigger: GGCTGCCACCAATAGCTTCCAGAAACATTTGCTCCA...CTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTCTTGCTGTACAATCTaGAGCAAATGTTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRARVTHWAPNLGSVSCCTI*SKCFWK Trigger: CTTCCAGAAACATTTGCTCCAGATTGTACAGCAAGA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCGCTCTTTCATACTGTTaGACTTCCAGGTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PERAFGPLELELRTVVYRALSYC*TSRWSQ Trigger: CTGTGACCACCTGGAAGTCCAACAGTATGAAAGAGC...GCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGCCCGGGGATGACTTTTaGGCCTGCCTGCTGTACGCG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEPGDDF*ACLLYA Trigger: CGCGTACAGCAGGCAGGCGCAAAAGTCATCCCCGGG...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGGCGCCTGAACAGGCCTaGGTCCTCCTTGGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEAPEQA*VLLGLV Trigger: CACAAGCCCAAGGAGGACCCAGGCCTGTTCAGGCGC...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGACCTTCTGCAGGTCGTaGCGAACCACACCGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAETFCRS*RTTPPS Trigger: GCTCGGCGGTGTGGTTCGCCACGACCTGCAGAAGGT...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGGGGAGCCTGGTCTCGTaGGCAGCCCTCAGCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEGSLVS*AALSKS Trigger: AGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCC...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGAGCTCCTGTAGACGCTaGGCCACAGCGCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAESSCRR*ATALWK Trigger: CTTCCACAGCGCTGTGGCCCAGCGTCTACAGGAGCT...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTTGAGGACGGTTGTTTATCGCTCTTGCTGTACAATCTaGAGCAAATGTTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PERAFGPLELELRTVVYRSCCTI*SKCFWK Trigger: CTTCCAGAAACATTTGCTCCAGATTGTACAGCAAGA...GCGATAAACAACCGTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGGTGTGAGGGGAGCCTaGTCTCGTGGGCAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVGVRGA*SRGQPS Trigger: TGAGGGCTGCCCACGAGACCAGGCTCCCCTCACACC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGTCCCAGTGGCTGCCTaGCTGCTGACGCCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVVPVAA*LLTPSV Trigger: CACAGATGGCGTCAGCAGGCAGGCAGCCACTGGGAC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGCCAGCTGCCTTCACATaGTCAGCTACCAGCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEPAAFT*SATSMC Trigger: GCACATGCTGGTAGCTGAGCATGTGAAGGCAGCTGG...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGCGCCTGAACAGGCCTaGGTCCTCCTTGGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVAPEQA*VLLGLV Trigger: CACAAGCCCAAGGAGGACCCAGGCCTGTTCAGGCGC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGAGAATGGCCAGAATGTaGTCTCGCCTGATGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAERMARM*SRLMSG Trigger: CCCGGACATCAGGCGAGACCACATTCTGGCCATTCT...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR TCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCCCGTCTCAAGGACCTaGACAGGAAACGGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVPVSRT*TGNGSC Trigger: GCAGCTCCCGTTTCCTGTTCAGGTCCTTGAGACGGG...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGTCCGGAAGAGGGTCTaGTTCAGCATGCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVVRKRV*FSMPRL Trigger: CAGCCTGGGCATGCTGAAGCAGACCCTCTTCCGGAC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGGTACCGCAGGGCCTTaGGGATGCCCAGCAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVGTAGP*GCPAVK Trigger: CTTAACTGCTGGGCATCCCCAAGGCCCTGCGGTACC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGTCCTCGAAGAGCACGTaGTGTGAGGGGAGCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVSSKST*CEGSLV Trigger: GACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGA...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGTCTGGAAGCTATTGGTaGCAGCCACTAGGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAESGSYW*QPLGVS Trigger: AGAAACCCCTAGTGGCTGCCACCAATAGCTTCCAGA...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGGTTTCTGGAAGCTATTaGTGGCAGCCACTAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEVSGSY*WQPLGV Trigger: AACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAAC...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGGCCCTCAGCAAGTCTTaGGTGTGTTGCAAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEALSKS*VCCKRF Trigger: GAATCTCTTGCAACACACCCAAGACTTGCTGAGGGC...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR TCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGGAAGTGTGTCCTGTGTaGGCCAGCTCTTGGTATATA | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEEVCPV*ASSWYI Trigger: TATATACCAAGAGCTGGCTCACACAGGACACACTTC...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGAAGTCTTGGGTGTGTTaGAAGAGATTCTGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEKSWVC*KRFWFR Trigger: CCGGAACCAGAATCTCTTGCAACACACCCAAGACTT...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGGCTCTTTCATACTGTTaGACTTCCAGGTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEALSYC*TSRWSQ Trigger: CTGTGACCACCTGGAAGTCCAACAGTATGAAAGAGC...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGTTCCTTTATGGTTCCTaGGAACCTGGCCAGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEFLYGS*EPGQKT Trigger: AGTCTTCTGGCCAGGTTCCCAGGAACCATAAAGGAA...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGTGGAGCAAATGTTTCTaGAAGCTATTGGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAEWSKCF*KLLVAA Trigger: GGCTGCCACCAATAGCTTCCAGAAACATTTGCTCCA...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGTCAGAGCCCAAGCCCTaGAAGGTGTTGCTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVSEPKP*KVLLMA Trigger: GGCCATTAGCAACACCTTCCAGGGCTTGGGCTCTGA...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGAGAATGGCCAGAATGTaGTCTCGCCTGATGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVRMARM*SRLMSG Trigger: CCCGGACATCAGGCGAGACCACATTCTGGCCATTCT...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR GCA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGCGATTCTGTTCCAGCTaGAAGATGCTGTCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIFRILSFALQCGCAERFCSS*KMLSKQ Trigger: CTGTTTTGACAGCATCTTGCAGCTGGAACAGAATCG...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGTACCATTCGCTCACTaGCTTCGACGCCAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVVPFAH*LRRQKS Trigger: GCTTTTCTGGCGTCGAAGGCAGTGAGCGAATGGTAC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGATTTACTTTCTGCCTaGGGTTCCAGATCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVDLLSA*GSRSSA Trigger: GGCTGAGGATCTGGAACCCCAGGCAGAAAGTAAATC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGGTTTCTGGAAGCTATTaGTGGCAGCCACTAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVVSGSY*WQPLGV Trigger: AACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAAC...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGTTCCTTTATGGTTCCTaGGAACCTGGCCAGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVFLYGS*EPGQKT Trigger: AGTCTTCTGGCCAGGTTCCCAGGAACCATAAAGGAA...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGTGGAGCAAATGTTTCTaGAAGCTATTGGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVWSKCF*KLLVAA Trigger: GGCTGCCACCAATAGCTTCCAGAAACATTTGCTCCA...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR GCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCGATTCTGTTCCAGCTaGAAGATGCTGTCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVRFCSS*KMLSKQ Trigger: CTGTTTTGACAGCATCTTGCAGCTGGAACAGAATCG...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CCA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGTCTTGCTGTACAATCTaGAGCAAATGTTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FNSHLFLESSASHYSVDVSCCTI*SKCFWK Trigger: CTTCCAGAAACATTTGCTCCAGATTGTACAGCAAGA...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | GTCGAGCCCACAGAGCAGGCTCTAGAAGTGGGGGCAGCGGCTCGGTaGGCAGCGCCAAGTCTGGGGCGCCCAGGAAGTCAGGACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VEPTEQALEVGAAAR*AAPSLGRPGSQDCH Trigger: ATGGCAGTCCTGACTTCCTGGGCGCCCCAGACTTGGCGCTGCCCACCGAGCCGCTGCCCCCACTTCTAGAGCCTGCTCTGTGGGCTCGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | GGGAGCCTGGTCTCGTGGGCAGCCCTCAGCAAGTCTTGGGTGTGTTaGAAGAGATTCTGGTTCCGGCGGCGGCCGAGTCTGCGTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSLVSWAALSKSWVC*KRFWFRRRPSLRSA Trigger: GGCACTACGCAGACTCGGCCGCCGCCGGAACCAGAATCTCTTGCAACACACCCAAGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | GGGTTGAAGTTCTCAGGCTGGTCCGGAAGAGGGTCTGCTTCAGCATaGCCAGGCTGGGTCTCAAGCTGCCCCCGTGGTGCACGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLKFSGWSGRGSASA*PGWVSSCPRGARSA Trigger: AGCAGAGCGTGCACCACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCCTCTTCCGGACCAGCCTGAGAACTTCAACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCGCTTGGTCCAGCCACTaGGCTTCAGAGCCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAGGRARVTHWAPNLGSVAWSSH*ASEPKP Trigger: GGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGC...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGCTTGGTCCAGCCACTaGGCTTCAGAGCCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGFSAGGRARVTHWAPNLAWSSH*ASEPKP Trigger: GGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGC...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS TCA 90 bp | GTCCACAGAGGTGGGCACTTCGATCTCCTCGAAGAGCACGTGGTGTaGGGGGAGCCTGGTCTCGTGGGCAGCCCTCAGCAAGTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHRGGHFDLLEEHVV*GEPGLVGSPQQVLG Trigger: ACCCAAGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGAGATCGAAGTGCCCACCTCTGTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | TTTTCAAACCTGGGCACAAAGAGACAGAGCGCACGCGCGCAGATCTaGAGGGTAGTGGCCTCCAGCTCCGCGGAGATAGCGCCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSNLGTKRQSARAQI*RVVASSSAEIAPAA Trigger: GGCAGCTGGCGCTATCTCCGCGGAGCTGGAGGCCACTACCCTGCAGATCTGCGCGCGTGCGCTCTGTCTCTTTGTGCCCAGGTTTGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | CGCCAGCTGCCTTCACATGCTCAGCTACCAGCATGTGCACATCGATaGACAGGGGCGCGTGGTAGAGGCCCTGCAGTACTTCCCGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQLPSHAQLPACAHR*TGARGRGPAVLPGP Trigger: AGGACCGGGAAGTACTGCAGGGCCTCTACCACGCGCCCCTGTCCATCGATGTGCACATGCTGGTAGCTGAGCATGTGAAGGCAGCTGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | AGCACGTCCACAGAGGTGGGCACTTCGATCTCCTCGAAGAGCACGTaGTGTGAGGGGAGCCTGGTCTCGTGGGCAGCCCTCAGCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: STSTEVGTSISSKST*CEGSLVSWAALSKS Trigger: AGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGAGATCGAAGTGCCCACCTCTGTGGACGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | TCTGCCTGGGGTTCCAGATCCTCAGCCTCTGTCCCAGTGGCTGCCTaGCTGCTGACGCCATCTGTGACTTTGGAGGGCTTCTCTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SAWGSRSSASVPVAA*LLTPSVTLEGFSGT Trigger: GGTACCAGAGAAGCCCTCCAAAGTCACAGATGGCGTCAGCAGGCAGGCAGCCACTGGGACAGAGGCTGAGGATCTGGAACCCCAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | TTCAGTCGATCCTGGCCACTGAACCTCTCGTGGGGCCTCAGCACCTaGCCCAGGTATTCGCGGACCACAAAACGGTGCACCTCCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSRSWPLNLSWGLST*PRYSRTTKRCTSCS Trigger: ACTGCAGGAGGTGCACCGTTTTGTGGTCCGCGAATACCTGGGGCAGGTGCTGAGGCCCCACGAGAGGTTCAGTGGCCAGGATCGACTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | TTCTCAGGCTGGTCCGGAAGAGGGTCTGCTTCAGCATGCCCAGGCTaGGTCTCAAGCTGCCCCCGTGGTGCACGCTCTGCTCTTTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: FSGWSGRGSASACPG*VSSCPRGARSALSY Trigger: GTATGAAAGAGCAGAGCGTGCACCACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCCTCTTCCGGACCAGCCTGAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
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| CDS CCA 90 bp | TCGTGGGCAGCCCTCAGCAAGTCTTGGGTGTGTTGCAAGAGATTCTaGTTCCGGCGGCGGCCGAGTCTGCGTAGTGCCAGAATGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWAALSKSWVCCKRF*FRRRPSLRSARMAR Trigger: TCTGGCCATTCTGGCACTACGCAGACTCGGCCGCCGCCGGAACCAGAATCTCTTGCAACACACCCAAGACTTGCTGAGGGCTGCCCACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCAGGCCTGGGTCCTCCTaGGGCTTGTGGGTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SAGGRARVTHWAPNLGSVRPGSS*GLWVEV Trigger: AACTTCAACCCACAAGCCCAAGGAGGACCCAGGCCT...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | CTCACGAGGGCTCAGGTGCCTAGCAAGAGGCTGAGGGCTGTCTACCCCTTCTGGAGGCCTGGGTCCTCCTaGGGCTTGTGGGTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTRAQVPSKRLRAVYPFWRPGSS*GLWVEV Trigger: AACTTCAACCCACAAGCCCAAGGAGGACCCAGGCCT...CCAGAAGGGGTAGACAGCCCTCAGCCTCTTGCTAGGCACCTGAGCCCTCGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGAAGCCCTGGAAGGTGTaGCTAATGGCCTGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PGFSAGGRARVTHWAPNLKPWKV*LMAWAS Trigger: GGATGCCCAGGCCATTAGCAACACCTTCCAGGGCTT...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | TCCGGAAGAGGGTCTGCTTCAGCATGCCCAGGCTGGGTCTCAAGCTaGCCCCGTGGTGCACGCTCTGCTCTTTCATACTGTTGGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRGSASACPGWVSS*PRGARSALSYCWTS Trigger: GGAAGTCCAACAGTATGAAAGAGCAGAGCGTGCACCACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCCTCTTCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
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| CDS GCA 90 bp | ACTTTCTGCCTGGGGTTCCAGATCCTCAGCCTCTGTCCCAGTGGCTaGCTGCCTGCTGACGCCATCTGTGACTTTGGAGGGCTTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFCLGFQILSLCPSG*LPADAICDFGGLLW Trigger: CCAGAGAAGCCCTCCAAAGTCACAGATGGCGTCAGCAGGCAGGCAGCCACTGGGACAGAGGCTGAGGATCTGGAACCCCAGGCAGAAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | GATCTGCAGGGTAGTGGCCTCCAGCTCCGCGGAGATAGCGCCAGCTaGCTTCACATGCTCAGCTACCAGCATGTGCACATCGATGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: DLQGSGLQLRGDSAS*LHMLSYQHVHIDGQ Trigger: CTGTCCATCGATGTGCACATGCTGGTAGCTGAGCATGTGAAGGCAGCTGGCGCTATCTCCGCGGAGCTGGAGGCCACTACCCTGCAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | AGGGTCTGCTTCAGCATGCCCAGGCTGGGTCTCAAGCTGCCCCCGTaGTGCACGCTCTGCTCTTTCATACTGTTGGACTTCCAGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVCFSMPRLGLKLPP*CTLCSFILLDFQVV Trigger: GACCACCTGGAAGTCCAACAGTATGAAAGAGCAGAGCGTGCACCACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
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| CDS CCA 90 bp | AGCTGCCGCTCAGTGATGAGGTCTGCCACGGATTTACTTTCTGCCTaGGGTTCCAGATCCTCAGCCTCTGTCCCAGTGGCTGCCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRSVMRSATDLLSA*GSRSSASVPVAACL Trigger: CAGGCAGGCAGCCACTGGGACAGAGGCTGAGGATCTGGAACCCCAGGCAGAAAGTAAATCCGTGGCAGACCTCATCACTGAGCGGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | CGCTGTGGAAGGCACGCAAGTAGGTCTCCCACACTGGGAAGTCGGTaGCTTCGTAAGCGGGCTGCATCTCTAAGCGCACCTTCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCGRHASRSPTLGSR*LRKRAASLSAPSAG Trigger: ACCTGCAGAAGGTGCGCTTAGAGATGCAGCCCGCTTACGAAGCCACCGACTTCCCAGTGTGGGAGACCTACTTGCGTGCCTTCCACAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | TGGGCACTTCGATCTCCTCGAAGAGCACGTGGTGTGAGGGGAGCCTaGTCTCGTGGGCAGCCCTCAGCAAGTCTTGGGTGTGTTGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WALRSPRRARGVRGA*SRGQPSASLGCVAR Trigger: TCTTGCAACACACCCAAGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGAGATCGAAGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGACGCCATCTGTGACTTaGGAGGGCTTCTCTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: AGGRARVTHWAPNLGSVMTPSVT*EGFSGT Trigger: GGTACCAGAGAAGCCCTCCAAAGTCACAGATGGCGT...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | GTCTGCTTCAGCATGCCCAGGCTGGGTCTCAAGCTGCCCCCGTGGTaGACGCTCTGCTCTTTCATACTGTTGGACTTCCAGGTGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VCFSMPRLGLKLPPW*TLCSFILLDFQVVT Trigger: TGTGACCACCTGGAAGTCCAACAGTATGAAAGAGCAGAGCGTGCACCACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGAAGCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCAAGGCCTGGGTCCTCCTaGGGCTTGTGGGTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPRPGSS*GLWVEV Trigger: AACTTCAACCCACAAGCCCAAGGAGGACCCAGGCCT...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTGTTTCTGGAAGCTATaGGTGGCAGCCACTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAGGRARVTHWAPNLGSVCFWKL*VAATRG Trigger: ACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAACA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTTCAGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGTGTTTCTGGAAGCTATaGGTGGCAGCCACTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGFSAGGRARVTHWAPNLCFWKL*VAATRG Trigger: ACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAACA...CAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACTGAAGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCAAAGCCCTGGAAGGTGTaGCTAATGGCCTGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPKPWKV*LMAWAS Trigger: GGATGCCCAGGCCATTAGCAACACCTTCCAGGGCTT...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | TGTCGTCTTTGTATGTCTCGCCCAGGATCTCAGCCACAGACAGGATaGCTTGGTCCAGCCACTTGGCTTCAGAGCCCAAGCCCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRLCMSRPGSQPQTG*LGPATWLQSPSPGR Trigger: CCTTCCAGGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGCCATCCTGTCTGTGGCTGAGATCCTGGGCGAGACATACAAAGACGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTGAGGACGGTTGTTTATCGCCCTGTGGGTGCTGGGAGCACAACCTTTGAAGCTTGGTCCAGCCACTaGGCTTCAGAGCCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ELRTVVYRPVGAGSTTFEAWSSH*ASEPKP Trigger: GGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGC...TTCAAAGGTTGTGCTCCCAGCACCCACAGGGCGATAAACAACCGTCCTCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCATGAGCCCTCAGCAAGTCTaGGGTGTGTTGCAAGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: AGGRARVTHWAPNLGSVMSPQQV*GVLQEI Trigger: AATCTCTTGCAACACACCCAAGACTTGCTGAGGGCT...CATGACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | TCTTTGTATGTCTCGCCCAGGATCTCAGCCACAGACAGGATGGCTTaGTCCAGCCACTTGGCTTCAGAGCCCAAGCCCTGGAAGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLYVSPRISATDRMA*SSHLASEPKPWKVL Trigger: CAACACCTTCCAGGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGCCATCCTGTCTGTGGCTGAGATCCTGGGCGAGACATACAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | GTATTCGCGGACCACAAAACGGTGCACCTCCTGCAGTGTCTCCTGTaGCAGTGGTGGGGTCACATGCTCAAGATGATGTGCAAAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFADHKTVHLLQCLL*QWWGHMLKMMCKVH Trigger: GTGGACTTTGCACATCATCTTGAGCATGTGACCCCACCACTGGCACAGGAGACACTGCAGGAGGTGCACCGTTTTGTGGTCCGCGAATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | GGAAGCTATTGGTGGCAGCCACTAGGGGTTTCTCCAGTTCCTTTATaGTTCCTGGGAACCTGGCCAGAAGACTGGTTCTCAGCTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: GSYWWQPLGVSPVPL*FLGTWPEDWFSAPR Trigger: GCGTGGAGCTGAGAACCAGTCTTCTGGCCAGGTTCCCAGGAACCATAAAGGAACTGGAGAAACCCCTAGTGGCTGCCACCAATAGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS TCA 90 bp | TCCTGCAGTGTCTCCTGTGCCAGTGGTGGGGTCACATGCTCAAGATaGTGTGCAAAGTCCACCACTTTGTCCATGAGGGGACGAAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSVSCASGGVTCSR*CAKSTTLSMRGRSV Trigger: CACACTTCGTCCCCTCATGGACAAAGTGGTGGACTTTGCACATCATCTTGAGCATGTGACCCCACCACTGGCACAGGAGACACTGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS GCA 90 bp | AGCTGCGTCTCCAGGTACCGCAATTGTTCAAAGGCCTTCACTAGCTaGCGCTCAGTGATGAGGTCTGCCACGGATTTACTTTCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCVSRYRNCSKAFTS*RSVMRSATDLLSAW Trigger: CCAGGCAGAAAGTAAATCCGTGGCAGACCTCATCACTGAGCGGCAGCTAGTGAAGGCCTTTGAACAATTGCGGTACCTGGAGACGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS GCA 90 bp | CAGTGTCTCCTGTGCCAGTGGTGGGGTCACATGCTCAAGATGATGTaGAAAGTCCACCACTTTGTCCATGAGGGGACGAAGTGTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCLLCQWWGHMLKMM*KVHHFVHEGTKCVL Trigger: CAGGACACACTTCGTCCCCTCATGGACAAAGTGGTGGACTTTGCACATCATCTTGAGCATGTGACCCCACCACTGGCACAGGAGACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | GACCACAAAACGGTGCACCTCCTGCAGTGTCTCCTGTGCCAGTGGTaGGGTCACATGCTCAAGATGATGTGCAAAGTCCACCACTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DHKTVHLLQCLLCQW*GHMLKMMCKVHHFV Trigger: GACAAAGTGGTGGACTTTGCACATCATCTTGAGCATGTGACCCCACCACTGGCACAGGAGACACTGCAGGAGGTGCACCGTTTTGTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | CACTTGGCTTCAGAGCCCAAGCCCTGGAAGGTGTTGCTAATGGCCTaGGCATCCAGGTTCATCTTATTAGAGCCCTTCAGTCGATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLASEPKPWKVLLMA*ASRFILLEPFSRSW Trigger: CCAGGATCGACTGAAGGGCTCTAATAAGATGAACCTGGATGCCCAGGCCATTAGCAACACCTTCCAGGGCTTGGGCTCTGAAGCCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGGGGTAGGGCCAGAGTGACTCACTGGGCTCCCAACTTGGGGTCAGTCTGTGTGAGCCAGCTCTaGGTATATAGCACCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SAGGRARVTHWAPNLGSVCVSQL*VYSTLN Trigger: ATTTAAGGTGCTATATACCAAGAGCTGGCTCACACA...GACTGACCCCAAGTTGGGAGCCCAGTGAGTCACTCTGGCCCTACCCCCAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 90 bp | CTCCACGCAGGCGTTAATGTAAGCACCCAGGTACCATTCGCTCACTaGCTTCGACGCCAGAAAAGCCTTTTCAAACCTGGGCACAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHAGVNVSTQVPFAH*LRRQKSLFKPGHKE Trigger: CTCTTTGTGCCCAGGTTTGAAAAGGCTTTTCTGGCGTCGAAGGCAGTGAGCGAATGGTACCTGGGTGCTTACATTAACGCCTGCGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGAAGCCTTCCCTGGCCTGAAGTCCTGAAAGGAGACTCCGCAGCCCCATGTGTGAGCCAGCTCTaGGTATATAGCACCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RKGSLPWPEVLKGDSAAPCVSQL*VYSTLN Trigger: ATTTAAGGTGCTATATACCAAGAGCTGGCTCACACA...TGGGGCTGCGGAGTCTCCTTTCAGGACTTCAGGCCAGGGAAGGCTTCCCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | ACACTCACAGAGGCCAGAGAGGGCGTTTGGTCCTCTGGAACTGGAGTTGAGGACTGTGTGAGCCAGCTCTaGGTATATAGCACCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLTEAREGVWSSGTGVEDCVSQL*VYSTLN Trigger: ATTTAAGGTGCTATATACCAAGAGCTGGCTCACACA...GTCCTCAACTCCAGTTCCAGAGGACCAAACGCCCTCTCTGGCCTCTGTGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223050.2 |
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| CDS CCA 90 bp | TGTCTTGCTGTACAATCTGGAGCAAATGTTTCTGGAAGCTATTGGTaGCAGCCACTAGGGGTTTCTCCAGTTCCTTTATGGTTCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLAVQSGANVSGSYW*QPLGVSPVPLWFLG Trigger: TCCCAGGAACCATAAAGGAACTGGAGAAACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAACATTTGCTCCAGATTGTACAGCAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 90 bp | GTATATAGCACCTTAAATAGAGGCTGCATGTCTTGCTGTACAATCTaGAGCAAATGTTTCTGGAAGCTATTGGTGGCAGCCACTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VYSTLNRGCMSCCTI*SKCFWKLLVAATRG Trigger: ACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAACATTTGCTCCAGATTGTACAGCAAGACATGCAGCCTCTATTTAAGGTGCTATATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | TTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGCTGAGAGCCCTCAGCAAGTCTaGGGTGTGTTGCAAGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: FTFIFRILSFALQCGCAESPQQV*GVLQEI Trigger: AATCTCTTGCAACACACCCAAGACTTGCTGAGGGCT...CTCAGCACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGACGCCATCTGTGACTTaGGAGGGCTTCTCTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: FNSHLFLESSASHYSVDVTPSVT*EGFSGT Trigger: GGTACCAGAGAAGCCCTCCAAAGTCACAGATGGCGT...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGTGTTTCTGGAAGCTATaGGTGGCAGCCACTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FNSHLFLESSASHYSVDVCFWKL*VAATRG Trigger: ACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAACA...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS-3UTR CAA 90 bp | TTTAATTCACATTTATTTTTAGAATCCTCAGCTTCGCACTACAGTGTGGATGTGAGCCCTCAGCAAGTCTaGGGTGTGTTGCAAGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: FNSHLFLESSASHYSVDVSPQQV*GVLQEI Trigger: AATCTCTTGCAACACACCCAAGACTTGCTGAGGGCT...CACATCCACACTGTAGTGCGAAGCTGAGGATTCTAAAAATAAATGTGAATTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | CTGGGCACAAAGAGACAGAGCGCACGCGCGCAGATCTaGAGGGTAGTGGCCTCCAGCTCCGCGGAGATAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LGTKRQSARAQI*RVVASSSAEIA Trigger: CGCTATCTCCGCGGAGCTGGAGGCCACTACCCTGCAGATCTGCGCGCGTGCGCTCTGTCTCTTTGTGCCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | TGGTCCGGAAGAGGGTCTGCTTCAGCATGCCCAGGCTaGGTCTCAAGCTGCCCCCGTGGTGCACGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSGRGSASACPG*VSSCPRGARSA Trigger: AGCAGAGCGTGCACCACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCCTCTTCCGGACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
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| CDS CCA 72 bp | AAGTGGGGGCAGCGGCTCGGTGGGCAGCGCCAAGTCTaGGGCGCCCAGGAAGTCAGGACTGCCATAGACATT | + |
|
Preference number: 6 (lower is better) Translates to: KWGQRLGGQRQV*GAQEVRTAIDI Trigger: AATGTCTATGGCAGTCCTGACTTCCTGGGCGCCCCAGACTTGGCGCTGCCCACCGAGCCGCTGCCCCCACTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | GAGCCCTTCAGTCGATCCTGGCCACTGAACCTCTCGTaGGGCCTCAGCACCTGCCCCAGGTATTCGCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: EPFSRSWPLNLS*GLSTCPRYSRT Trigger: GGTCCGCGAATACCTGGGGCAGGTGCTGAGGCCCCACGAGAGGTTCAGTGGCCAGGATCGACTGAAGGGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS TCA 72 bp | GGTGGGCACTTCGATCTCCTCGAAGAGCACGTGGTGTaGGGGGAGCCTGGTCTCGTGGGCAGCCCTCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GGHFDLLEEHVV*GEPGLVGSPQQ Trigger: TTGCTGAGGGCTGCCCACGAGACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGAGATCGAAGTGCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | TCCTGGCCACTGAACCTCTCGTGGGGCCTCAGCACCTaGCCCAGGTATTCGCGGACCACAAAACGGTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SWPLNLSWGLST*PRYSRTTKRCT Trigger: GGTGCACCGTTTTGTGGTCCGCGAATACCTGGGGCAGGTGCTGAGGCCCCACGAGAGGTTCAGTGGCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | GGGAGCCTGGTCTCGTGGGCAGCCCTCAGCAAGTCTTaGGTGTGTTGCAAGAGATTCTGGTTCCGGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLVSWAALSKS*VCCKRFWFRRR Trigger: CCGCCGCCGGAACCAGAATCTCTTGCAACACACCCAAGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | ACAGAGGTGGGCACTTCGATCTCCTCGAAGAGCACGTaGTGTGAGGGGAGCCTGGTCTCGTGGGCAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TEVGTSISSKST*CEGSLVSWAAL Trigger: GAGGGCTGCCCACGAGACCAGGCTCCCCTCACACCACGTGCTCTTCGAGGAGATCGAAGTGCCCACCTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CAA 72 bp | GGGGAGCCTGGTCTCGTGGGCAGCCCTCAGCAAGTCTaGGGTGTGTTGCAAGAGATTCTGGTTCCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GEPGLVGSPQQV*GVLQEILVPAA Trigger: CGCCGCCGGAACCAGAATCTCTTGCAACACACCCAAGACTTGCTGAGGGCTGCCCACGAGACCAGGCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS GCA 72 bp | CTGGGGTTCCAGATCCTCAGCCTCTGTCCCAGTGGCTaGCTGCCTGCTGACGCCATCTGTGACTTTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGFQILSLCPSG*LPADAICDFGG Trigger: CCCTCCAAAGTCACAGATGGCGTCAGCAGGCAGGCAGCCACTGGGACAGAGGCTGAGGATCTGGAACCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | GTCTCGTGGGCAGCCCTCAGCAAGTCTTGGGTGTGTTaGAAGAGATTCTGGTTCCGGCGGCGGCCGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSWAALSKSWVC*KRFWFRRRPSL Trigger: CAGACTCGGCCGCCGCCGGAACCAGAATCTCTTGCAACACACCCAAGACTTGCTGAGGGCTGCCCACGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS CCA 72 bp | GTCTCGCCCAGGATCTCAGCCACAGACAGGATGGCTTaGTCCAGCCACTTGGCTTCAGAGCCCAAGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSPRISATDRMA*SSHLASEPKPW Trigger: CCAGGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGCCATCCTGTCTGTGGCTGAGATCCTGGGCGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS GCA 72 bp | GGGTCTGCTTCAGCATGCCCAGGCTGGGTCTCAAGCTaGCCCCGTGGTGCACGCTCTGCTCTTTCATACTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSASACPGWVSS*PRGARSALSYC Trigger: ACAGTATGAAAGAGCAGAGCGTGCACCACGGGGGCAGCTTGAGACCCAGCCTGGGCATGCTGAAGCAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
||
| CDS GCA 72 bp | CCCAGGTATTCGCGGACCACAAAACGGTGCACCTCCTaGAGTGTCTCCTGTGCCAGTGGTGGGGTCACATGC | + |
|
Preference number: 6 (lower is better) Translates to: PRYSRTTKRCTS*SVSCASGGVTC Trigger: GCATGTGACCCCACCACTGGCACAGGAGACACTGCAGGAGGTGCACCGTTTTGTGGTCCGCGAATACCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS GCA 72 bp | GTTGCAAGAGATTCTGGTTCCGGCGGCGGCCGAGTCTaGGTAGTGCCAGAATGGCCAGAATGTGGTCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VARDSGSGGGRV*VVPEWPECGLA Trigger: GGCGAGACCACATTCTGGCCATTCTGGCACTACGCAGACTCGGCCGCCGCCGGAACCAGAATCTCTTGCAAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS CCA 72 bp | GGTCCTCCTTGGGCTTGTGGGTTGAAGTTCTCAGGCTaGTCCGGAAGAGGGTCTGCTTCAGCATGCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPWACGLKFSG*SGRGSASACPG Trigger: GCCTGGGCATGCTGAAGCAGACCCTCTTCCGGACCAGCCTGAGAACTTCAACCCACAAGCCCAAGGAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS CCA 72 bp | AGCGCTGTGGAAGGCACGCAAGTAGGTCTCCCACACTaGGAAGTCGGTGGCTTCGTAAGCGGGCTGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAVEGTQVGLPH*EVGGFVSGLHL Trigger: GAGATGCAGCCCGCTTACGAAGCCACCGACTTCCCAGTGTGGGAGACCTACTTGCGTGCCTTCCACAGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
||
| CDS CAA 72 bp | TGTCTCGCCCAGGATCTCAGCCACAGACAGGATGGCTaGGTCCAGCCACTTGGCTTCAGAGCCCAAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLAQDLSHRQDG*VQPLGFRAQAL Trigger: CAGGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGCCATCCTGTCTGTGGCTGAGATCCTGGGCGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | TGCCCCCGTGGTGCACGCTCTGCTCTTTCATACTGTTaGACTTCCAGGTGGTCACAGGGAGGGTCTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: CPRGARSALSYC*TSRWSQGGSVT Trigger: AGTCACAGACCCTCCCTGTGACCACCTGGAAGTCCAACAGTATGAAAGAGCAGAGCGTGCACCACGGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
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| CDS CCA 72 bp | GTGACTTTGGAGGGCTTCTCTGGTACCGCAGGGCCTTaGGGATGCCCAGCAGTTAAGCCTTCATCTATGGCC | + |
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Preference number: 6 (lower is better) Translates to: VTLEGFSGTAGP*GCPAVKPSSMA Trigger: GGCCATAGATGAAGGCTTAACTGCTGGGCATCCCCAAGGCCCTGCGGTACCAGAGAAGCCCTCCAAAGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | CCTTCACATGCTCAGCTACCAGCATGTGCACATCGATaGACAGGGGCGCGTGGTAGAGGCCCTGCAGTACTT | + |
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Preference number: 6 (lower is better) Translates to: PSHAQLPACAHR*TGARGRGPAVL Trigger: AAGTACTGCAGGGCCTCTACCACGCGCCCCTGTCCATCGATGTGCACATGCTGGTAGCTGAGCATGTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CAA 90 bp | GTCTTTGTATGTCTCGCCCAGGATCTCAGCCACAGACAGGATGGCTaGGTCCAGCCACTTGGCTTCAGAGCCCAAGCCCTGGAAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VFVCLAQDLSHRQDG*VQPLGFRAQALEGV Trigger: AACACCTTCCAGGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGCCATCCTGTCTGTGGCTGAGATCCTGGGCGAGACATACAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS TCA 72 bp | ACTGTTGGACTTCCAGGTGGTCACAGGGAGGGTCTGTaGCTTCCTAGGCTCCCTGGGGCTTTTTACCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TVGLPGGHREGL*LPRLPGAFYLW Trigger: CCAGAGGTAAAAAGCCCCAGGGAGCCTAGGAAGTCACAGACCCTCCCTGTGACCACCTGGAAGTCCAACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000221144.2 ENSMUST00000222437.2 ENSMUST00000222897.2 ENSMUST00000223050.2 ENSMUST00000223431.2 |
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| CDS CCA 72 bp | ACGGTGCACCTCCTGCAGTGTCTCCTGTGCCAGTGGTaGGGTCACATGCTCAAGATGATGTGCAAAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TVHLLQCLLCQW*GHMLKMMCKVH Trigger: GTGGACTTTGCACATCATCTTGAGCATGTGACCCCACCACTGGCACAGGAGACACTGCAGGAGGTGCACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CAA 90 bp | GCTTGGTCCAGCCACTTGGCTTCAGAGCCCAAGCCCTGGAAGGTGTaGCTAATGGCCTGGGCATCCAGGTTCATCTTATTAGAGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: AWSSHLASEPKPWKV*LMAWASRFILLEPF Trigger: GAAGGGCTCTAATAAGATGAACCTGGATGCCCAGGCCATTAGCAACACCTTCCAGGGCTTGGGCTCTGAAGCCAAGTGGCTGGACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | TCACTGCCTTCGACGCCAGAAAAGCCTTTTCAAACCTaGGCACAAAGAGACAGAGCGCACGCGCGCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: SLPSTPEKPFQT*AQRDRAHARRS Trigger: AGATCTGCGCGCGTGCGCTCTGTCTCTTTGTGCCCAGGTTTGAAAAGGCTTTTCTGGCGTCGAAGGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CAA 72 bp | CGTATAAGTGTTTCCAGGTGCCGCCGGATGTCGTCTTaGTATGTCTCGCCCAGGATCTCAGCCACAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: RISVSRCRRMSS*YVSPRISATDR Trigger: CCTGTCTGTGGCTGAGATCCTGGGCGAGACATACAAAGACGACATCCGGCGGCACCTGGAAACACTTATACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | CTGTGCCAGTGGTGGGGTCACATGCTCAAGATGATGTaGAAAGTCCACCACTTTGTCCATGAGGGGACGAAG | + |
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Preference number: 6 (lower is better) Translates to: LCQWWGHMLKMM*KVHHFVHEGTK Trigger: CTTCGTCCCCTCATGGACAAAGTGGTGGACTTTGCACATCATCTTGAGCATGTGACCCCACCACTGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | TGGTGGCAGCCACTAGGGGTTTCTCCAGTTCCTTTATaGTTCCTGGGAACCTGGCCAGAAGACTGGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: WWQPLGVSPVPL*FLGTWPEDWFS Trigger: TGAGAACCAGTCTTCTGGCCAGGTTCCCAGGAACCATAAAGGAACTGGAGAAACCCCTAGTGGCTGCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | GGCGTTAATGTAAGCACCCAGGTACCATTCGCTCACTaGCTTCGACGCCAGAAAAGCCTTTTCAAACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GVNVSTQVPFAH*LRRQKSLFKPG Trigger: CCCAGGTTTGAAAAGGCTTTTCTGGCGTCGAAGGCAGTGAGCGAATGGTACCTGGGTGCTTACATTAACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | TCAGAGCCCAAGCCCTGGAAGGTGTTGCTAATGGCCTaGGCATCCAGGTTCATCTTATTAGAGCCCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SEPKPWKVLLMA*ASRFILLEPFS Trigger: ACTGAAGGGCTCTAATAAGATGAACCTGGATGCCCAGGCCATTAGCAACACCTTCCAGGGCTTGGGCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CAA 72 bp | AGCCACTTGGCTTCAGAGCCCAAGCCCTGGAAGGTGTaGCTAATGGCCTGGGCATCCAGGTTCATCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: SHLASEPKPWKV*LMAWASRFILL Trigger: TAATAAGATGAACCTGGATGCCCAGGCCATTAGCAACACCTTCCAGGGCTTGGGCTCTGAAGCCAAGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | TCCAGGTACCGCAATTGTTCAAAGGCCTTCACTAGCTaGCGCTCAGTGATGAGGTCTGCCACGGATTTACTT | + |
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Preference number: 6 (lower is better) Translates to: SRYRNCSKAFTS*RSVMRSATDLL Trigger: AAGTAAATCCGTGGCAGACCTCATCACTGAGCGGCAGCTAGTGAAGGCCTTTGAACAATTGCGGTACCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072646.8 ENSMUST00000220852.2 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CAA 90 bp | ACTTTGTCCATGAGGGGACGAAGTGTGTCCTGTGTGAGCCAGCTCTaGGTATATAGCACCTTAAATAGAGGCTGCATGTCTTGCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: TLSMRGRSVSCVSQL*VYSTLNRGCMSCCT Trigger: TGTACAGCAAGACATGCAGCCTCTATTTAAGGTGCTATATACCAAGAGCTGGCTCACACAGGACACACTTCGTCCCCTCATGGACAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | GTACAATCTGGAGCAAATGTTTCTGGAAGCTATTGGTaGCAGCCACTAGGGGTTTCTCCAGTTCCTTTATGG | + |
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Preference number: 6 (lower is better) Translates to: VQSGANVSGSYW*QPLGVSPVPLW Trigger: CCATAAAGGAACTGGAGAAACCCCTAGTGGCTGCCACCAATAGCTTCCAGAAACATTTGCTCCAGATTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS CCA 72 bp | ACCTTAAATAGAGGCTGCATGTCTTGCTGTACAATCTaGAGCAAATGTTTCTGGAAGCTATTGGTGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TLNRGCMSCCTI*SKCFWKLLVAA Trigger: GGCTGCCACCAATAGCTTCCAGAAACATTTGCTCCAGATTGTACAGCAAGACATGCAGCCTCTATTTAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | AGCCAGCTCTTGGTATATAGCACCTTAAATAGAGGCTaGATGTCTTGCTGTACAATCTGGAGCAAATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQLLVYSTLNRG*MSCCTIWSKCF Trigger: GAAACATTTGCTCCAGATTGTACAGCAAGACATGCAGCCTCTATTTAAGGTGCTATATACCAAGAGCTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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| CDS GCA 72 bp | TTGGTATATAGCACCTTAAATAGAGGCTGCATGTCTTaGTGTACAATCTGGAGCAAATGTTTCTGGAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: LVYSTLNRGCMS*CTIWSKCFWKL Trigger: TAGCTTCCAGAAACATTTGCTCCAGATTGTACAGCAAGACATGCAGCCTCTATTTAAGGTGCTATATACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072646.8 ENSMUST00000222897.2 ENSMUST00000223050.2 |
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