RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXOC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021357

Ensembl transcript IDs: ENSMUST00000021785.8, ENSMUST00000102946.8

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGAGCAGCCTCTTTCCAGCTATGGAGCAAGACATTTCACCGCGTaGGAAGTGGCAGAGGGGGAGGGAGTGCTGCCTTGCCGAGGAGCC +
Preference number: 1 (lower is better)
Translates to: PEQPLSSYGARHFTA*EVAEGEGVLPCRGA
Trigger: GGCTCCTCGGCAAGGCAGCACTCCCTCCCCCTCTGCCACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGAAAGAGGCTGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR TCA 90 bp GAGTGCTGCCTTGCCGAGGAGCCTGGCTTCATCTTTAGGCTGCATTaGAGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCC +
Preference number: 1 (lower is better)
Translates to: ECCLAEEPGFIFRLH*RPQAFPRPCGCDRA
Trigger: GGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCTTCAATGCAGCCTAAAGATGAAGCCAGGCTCCTCGGCAAGGCAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR GCA 90 bp GGAGGGAGTGCTGCCTTGCCGAGGAGCCTGGCTTCATCTTTAGGCTaGATTGAAGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACA +
Preference number: 1 (lower is better)
Translates to: GGSAALPRSLASSLG*IEDHKPSPGLVGVT
Trigger: TGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCTTCAATGCAGCCTAAAGATGAAGCCAGGCTCCTCGGCAAGGCAGCACTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CCA 90 bp ACTCTACTGCGCAAGCCACTCACCACTGAGTCACAGCTCAGTGCCTaGTCACTTGGGGCACCTCAAATCTTTACAAAACACAGCCCATGC +
Preference number: 1 (lower is better)
Translates to: TLLRKPLTTESQLSA*SLGAPQIFTKHSPC
Trigger: GCATGGGCTGTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACCAGGCACTGAGCTGTGACTCAGTGGTGAGTGGCTTGCGCAGTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR TCA 90 bp AACCCTCCCCACACCACTGCAGTGATCCATCAGCTTAAGGCTGAGTaGGAACCACAAGCTTCAGTGTTTAGCACTGGGAGAAATGAAAGT +
Preference number: 1 (lower is better)
Translates to: NPPHTTAVIHQLKAE*EPQASVFSTGRNES
Trigger: ACTTTCATTTCTCCCAGTGCTAAACACTGAAGCTTGTGGTTCTCACTCAGCCTTAAGCTGATGGATCACTGCAGTGGTGTGGGGAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CAA 90 bp ACATTTCACCGCGTGGGAAGTGGCAGAGGGGGAGGGAGTGCTGCCTaGCCGAGGAGCCTGGCTTCATCTTTAGGCTGCATTGAAGACCAC +
Preference number: 2 (lower is better)
Translates to: TFHRVGSGRGGGSAA*PRSLASSLGCIEDH
Trigger: GTGGTCTTCAATGCAGCCTAAAGATGAAGCCAGGCTCCTCGGCAAGGCAGCACTCCCTCCCCCTCTGCCACTTCCCACGCGGTGAAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR GCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGCAGAGGGGGAGGGAGTaGTGCCTTGCCGAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRQRGRE*CLAEEP
Trigger: AGGCTCCTCGGCAAGGCAGCACTCCCTCCCCCTCTG...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR CCA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTGAAATTAAATATCCATaGGCATCTTTCTGCACCACC +
Preference number: 2 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGEIKYP*ASFCTT
Trigger: GGTGGTGCAGAAAGATGCCCATGGATATTTAATTTC...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR CCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGGCCTCTTTCCAGCTATaGAGCAAGACATTTCACCGC +
Preference number: 2 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRASFQL*SKTFHR
Trigger: GCGGTGAAATGTCTTGCTCCATAGCTGGAAAGAGGC...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR GCA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCTTGACGTGTAATCTCTaGTGCACAGCACGAGGACAG +
Preference number: 2 (lower is better)
Translates to: KTVTSNLFSNVSPGLETALTCNL*CTARGQ
Trigger: CTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAA...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR TCA 90 bp AGGGGTCTTACAGAGAAGGACAACTACTGGCTTTGTGCACTGTATTTATTAGGTATCTTTAGGCTGCATTaGAGACCACAAGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: RGLTEKDNYWLCALYLLGIFRLH*RPQAFP
Trigger: GGGGAAGGCTTGTGGTCTTCAATGCAGCCTAAAGAT...ACCTAATAAATACAGTGCACAAAGCCAGTAGTTGTCCTTCTCTGTAAGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR TCA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGACATACAGGTCCTTGTaGACCCTCCCCACACCACTG +
Preference number: 2 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLTYRSL*TLPTPL
Trigger: CAGTGGTGTGGGGAGGGTTCACAAGGACCTGTATGT...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR CCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCAGGCTGACGGAAGGATaGAGTGAGGTGAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFRLTEG*SEVKAA
Trigger: GGCAGCTTTCACCTCACTCCATCCTTCCGTCAGCCT...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR TCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCATCTTTAGGCTGCATTaGAGACCACAAGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFIFRLH*RPQAFP
Trigger: GGGGAAGGCTTGTGGTCTTCAATGCAGCCTAAAGAT...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR TCA 90 bp AGAGCTAATAAAAATGGTGAAATAAAGATAGGGGTCTTACAGAGAAGGACAACTGATCAGTCTGAAGAGTaGAGTGCAACAGAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: RANKNGEIKIGVLQRRTTDQSEE*SATEAD
Trigger: GTCAGCCTCTGTTGCACTTCACTCTTCAGACTGATC...AGTTGTCCTTCTCTGTAAGACCCCTATCTTTATTTCACCATTTTTATTAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR CCA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGAGAAATTAAATATCCATaGGCATCTTTCTGCACCACC +
Preference number: 2 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGEIKYP*ASFCTT
Trigger: GGTGGTGCAGAAAGATGCCCATGGATATTTAATTTC...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CAA 90 bp ATAATAACAGCACACAGGGAGGAGACAATGCGGTACATACTTATTTaGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGTGATAAA +
Preference number: 2 (lower is better)
Translates to: IITAHREETMRYILI*QQRITISTSSHCDK
Trigger: TTTATCACAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCCTCCCTGTGTGCTGTTATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR GCA 72 bp TCACCGCGTGGGAAGTGGCAGAGGGGGAGGGAGTGCTaGCTTGCCGAGGAGCCTGGCTTCATCTTTAGGCTG +
Preference number: 3 (lower is better)
Translates to: SPRGKWQRGREC*LAEEPGFIFRL
Trigger: CAGCCTAAAGATGAAGCCAGGCTCCTCGGCAAGGCAGCACTCCCTCCCCCTCTGCCACTTCCCACGCGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CCA 72 bp CCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTaGCAGAGGGGGAGGGAGTGCTGCCTTGCCGAGGAG +
Preference number: 3 (lower is better)
Translates to: PAMEQDISPRGK*QRGRECCLAEE
Trigger: CTCCTCGGCAAGGCAGCACTCCCTCCCCCTCTGCCACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR TCA 72 bp TGGAAACTGCCAACAGTAGGCCTAGAAGAGGGGCACTaGGAAGGGCACACACACACACCATGGGCCGCTCTG +
Preference number: 3 (lower is better)
Translates to: WKLPTVGLEEGH*EGHTHTPWAAL
Trigger: CAGAGCGGCCCATGGTGTGTGTGTGTGCCCTTCTCAGTGCCCCTCTTCTAGGCCTACTGTTGGCAGTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR GCA 72 bp GCTGCCTTGCCGAGGAGCCTGGCTTCATCTTTAGGCTaGATTGAAGACCACAAGCCTTCCCCAGGCCTTGTG +
Preference number: 3 (lower is better)
Translates to: AALPRSLASSLG*IEDHKPSPGLV
Trigger: CACAAGGCCTGGGGAAGGCTTGTGGTCTTCAATGCAGCCTAAAGATGAAGCCAGGCTCCTCGGCAAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR TCA 72 bp TTGAAGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTaGCAGGGCCTCCACATACAGGTCCTTGTGAACCCT +
Preference number: 3 (lower is better)
Translates to: LKTTSLPQALWV*QGLHIQVLVNP
Trigger: AGGGTTCACAAGGACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR TCA 72 bp CTTGCCGAGGAGCCTGGCTTCATCTTTAGGCTGCATTaGAGACCACAAGCCTTCCCCAGGCCTTGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: LAEEPGFIFRLH*RPQAFPRPCGC
Trigger: ACACCCACAAGGCCTGGGGAAGGCTTGTGGTCTTCAATGCAGCCTAAAGATGAAGCCAGGCTCCTCGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR CAA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGGGAGGGAGTGCTGCCTaGCCGAGGAGCCTGGCTTCA +
Preference number: 3 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRGGSAA*PRSLAS
Trigger: TGAAGCCAGGCTCCTCGGCAAGGCAGCACTCCCTCC...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CCA 72 bp CGCAAGCCACTCACCACTGAGTCACAGCTCAGTGCCTaGTCACTTGGGGCACCTCAAATCTTTACAAAACAC +
Preference number: 3 (lower is better)
Translates to: RKPLTTESQLSA*SLGAPQIFTKH
Trigger: GTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACCAGGCACTGAGCTGTGACTCAGTGGTGAGTGGCTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR-3UTR CAA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTAGTTCATACGAGGACTaGTGGATCACAAATTTATCC +
Preference number: 3 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGSSYED*WITNLS
Trigger: GGATAAATTTGTGATCCACAAGTCCTCGTATGAACT...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CCA 72 bp TTAAATATCCATGGGCATCTTTCTGCACCACCATGCTaGGGAAAAGAGACGTTAAATGCAGTGCTTGACGTG +
Preference number: 3 (lower is better)
Translates to: LNIHGHLSAPPC*GKETLNAVLDV
Trigger: CACGTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAGATGCCCATGGATATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR GCA 72 bp AAATTAAATATCCATGGGCATCTTTCTGCACCACCATaGTGGGGAAAAGAGACGTTAAATGCAGTGCTTGAC +
Preference number: 3 (lower is better)
Translates to: KLNIHGHLSAPP*WGKETLNAVLD
Trigger: GTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAGATGCCCATGGATATTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR TCA 72 bp CAGTGTTTAGCACTGGGAGAAATGAAAGTCAGACTATaGAATTCAGAGTTCATACGAGGACTTGTGGATCAC +
Preference number: 3 (lower is better)
Translates to: QCLALGEMKVRL*NSEFIRGLVDH
Trigger: GTGATCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCCAGTGCTAAACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR GCA 72 bp CACACAGGGAGGAGACAATGCGGTACATACTTATTTTaGAACAAAGGATTACAATTTCTACTTCCAGTCACT +
Preference number: 3 (lower is better)
Translates to: HTGRRQCGTYLF*NKGLQFLLPVT
Trigger: AGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCCTCCCTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTGTGACGCTGTCTGACTaGGGTGGCCCAACACCGAGG +
Preference number: 4 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGVTLSD*GGPTPR
Trigger: CCTCGGTGTTGGGCCACCTCAGTCAGACAGCGTCAC...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTGCTCCCCCTCTTCAGTaGCGCTGTCTGACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGAPPLQ*RCLTEV
Trigger: CACCTCAGTCAGACAGCGTCACTGAAGAGGGGGAGC...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AAGCTGCCTGCAGGTCACAATGACCTGACTCTACTGCGCAAGCCACTCACCACTCTGCCCCGAAAGCTCTaGCTGCACCTCCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: KLPAGHNDLTLLRKPLTTLPRKL*LHLPAA
Trigger: GGCGGCTGGGAGGTGCAGGCAGAGCTTTCGGGGCAG...AGTGGTGAGTGGCTTGCGCAGTAGAGTCAGGTCATTGTGACCTGCAGGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTCAGCTTGGAAGCAGGTaGGCTGCAAGTGCATGCTGC +
Preference number: 4 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGQLGSR*AASACC
Trigger: GCAGCATGCACTTGCAGCTCACCTGCTTCCAAGCTG...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTGAGCAGCTCTTCCAGTaGCTTTTTGTCCGCACCACT +
Preference number: 4 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGEQLFQ*LFVRTT
Trigger: AGTGGTGCGGACAAAAAGTCACTGGAAGAGCTGCTC...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTTTCAGTGACGCTGTCTaGCTGAGGTGGCCCAACACC +
Preference number: 4 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCFSDAV*LRWPNT
Trigger: GGTGTTGGGCCACCTCAGTCAGACAGCGTCACTGAA...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTGCGTTTTAGGCTGTTaGAAGACGCTGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPQAFPRPCGCDRASTYRCVLGC*KTLASP
Trigger: TGGAGAAGCCAGCGTCTTTCAACAGCCTAAAACGCA...CCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGCTTTTAAATAGTTTCTaGCACCTGCCGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPQAFPRPCGCDRASTYRLLNSF*HLPEAG
Trigger: GCCTGCCTCCGGCAGGTGTCAGAAACTATTTAAAAG...CCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp TCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTGGCAGAGGGGGAGGGAGCCGCCCTTCACATATaGCAGACTACCCTCACTCTT +
Preference number: 4 (lower is better)
Translates to: SSYGARHFTAWEVAEGEGAALHI*QTTLTL
Trigger: AAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGGC...TCCCTCCCCCTCTGCCACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GAGAAATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGGCACCACTTGCAAGCTaGGGCAGGGCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EKSPDSQHFEEYATQPFRAPLAS*GRASRA
Trigger: GGCCCTGGAGGCCCTGCCTCAGCTTGCAAGTGGTGC...CCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCACTGCCCCGAAAGCTCTaGCTGCACCTCCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPLPRKL*LHLPAA
Trigger: GGCGGCTGGGAGGTGCAGGCAGAGCTTTCGGGGCAG...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTGTTTTCATGACTGCTaGAGACGCAGCTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RPQAFPRPCGCDRASTYRCFHDC*RRSLEA
Trigger: TGCTTCCAAGCTGCGTCTCCAGCAGTCATGAAAACA...CCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTTCTTTCACTCTGGCCTaGCTTCTCAGCCGTCTCACT +
Preference number: 4 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCSFTLA*LLSRLT
Trigger: AGTGAGACGGCTGAGAAGTCAGGCCAGAGTGAAAGA...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGGCAGGGAGTGAACAATaGTCTGTTCAAACTGACATG +
Preference number: 4 (lower is better)
Translates to: RPQAFPRPCGCDRASTYRAGSEQ*SVQTDM
Trigger: CATGTCAGTTTGAACAGAGCATTGTTCACTCCCTGC...CCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTCCGAGGTCAGGTAAATaGCTACAGTGTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCPRSGK*LQCPSE
Trigger: CTCTGAGGGACACTGTAGCCATTTACCTGACCTCGG...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAGCTGCCTGCAGGTCACAATGACCTGACTCTACTGCGCAAGCCACTCACCACTTGCGTTTTAGGCTGTTaGAAGACGCTGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KLPAGHNDLTLLRKPLTTCVLGC*KTLASP
Trigger: TGGAGAAGCCAGCGTCTTTCAACAGCCTAAAACGCA...AGTGGTGAGTGGCTTGCGCAGTAGAGTCAGGTCATTGTGACCTGCAGGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAGCACCACTTGCAAGCTaGGGCAGGGCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSILKSMLHSLSGPKLAIAPLAS*GRASRA
Trigger: GGCCCTGGAGGCCCTGCCTCAGCTTGCAAGTGGTGC...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTCGCAGACATCCATTCTaGCGTGAGGAGGCAATTATG +
Preference number: 4 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCRRHPF*REEAIM
Trigger: CATAATTGCCTCCTCACGGCAGAATGGATGTCTGCG...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GCCAGAGCAGCCTCTTTCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTCAGGTGAGCTGCAAGTaGATGCTGCTCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: ARAASFQLWSKTFHRVGSQVSCK*MLLLNL
Trigger: CAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTG...ACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGAAAGAGGCTGCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GGTCACTTGGGGCACCTCAAATCTTTACAAAACACAGCCCATGCCAGAGCAGCCTGGAAGCAGGTGAGCTaGAAGTGCATGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GHLGHLKSLQNTAHARAAWKQVS*KCMLLL
Trigger: CAAGAGCAGCATGCACTTGCAGCTCACCTGCTTCCA...GGCTGCTCTGGCATGGGCTGTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAACAGTAGGCCTAGATTCTCGGAGGCTGAGTaGAAGCAGGGCTCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: NLFSNVSPGLETANSRPRFSEAE*KQGSPD
Trigger: ATCCGGGGAGCCCTGCTTCCACTCAGCCTCCGAGAA...TCTAGGCCTACTGTTGGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTATATTGATGCATAACTaGCAAACCTCCTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGILMHN*QTSSCV
Trigger: AACGCAGGAGGAGGTTTGCCAGTTATGCATCAATAT...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTGCTGAGAGAGCATCTTaGGCTTCAAAGAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCAERAS*ASKKVL
Trigger: CAGTACCTTCTTTGAAGCTCAAGATGCTCTCTCAGC...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp TCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTGGCAGAGGGGGAGGGATCTGCTTCTAGTTTTTaGTGGATAGCTGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSYGARHFTAWEVAEGEGSASSF*WIAERA
Trigger: TGCTCTCTCAGCTATCCATCAAAAACTAGAAGCAGA...TCCCTCCCCCTCTGCCACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCGTGACGCTGTCTGACTaGGGTGGCCCAACACCGAGG +
Preference number: 4 (lower is better)
Translates to: KTVTSNLFSNVSPGLETAVTLSD*GGPTPR
Trigger: CCTCGGTGTTGGGCCACCTCAGTCAGACAGCGTCAC...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGACAAAGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGCCCCTTCTCGGAGGCTaGGTGGAAGCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GQSSKNCDFKSLLKCLTWPLLGG*VEAGLP
Trigger: GGGGAGCCCTGCTTCCACTCAGCCTCCGAGAAGGGG...CCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCTTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAACAGTAGGCCTAGAGGCCAGACTGAAAGCTaGTCCCCCTCTTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: NLFSNVSPGLETANSRPRGQTES*SPSSVT
Trigger: CGTCACTGAAGAGGGGGAGCAGCTTTCAGTCTGGCC...TCTAGGCCTACTGTTGGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTGTGAATACCTCTGCATaGACAGCAATTATATTCACC +
Preference number: 4 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGVNTSA*TAIIFT
Trigger: GGTGAATATAATTGCTGTGCATGCAGAGGTATTCAC...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTATTTCAAGTCTGGCCTaGAGTGCTCCATTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCISSLA*SAPFLL
Trigger: CAGCAGAAATGGAGCACTGCAGGCCAGACTTGAAAT...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCATTCTCGGAGGCTGAGTaGAAGCAGGGCTCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPFSEAE*KQGSPD
Trigger: ATCCGGGGAGCCCTGCTTCCACTCAGCCTCCGAGAA...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GAGAAATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGTTCAGTGACGCTGTCTaGCTGAGGTGGCCCAACACC +
Preference number: 4 (lower is better)
Translates to: EKSPDSQHFEEYATQPFRFSDAV*LRWPNT
Trigger: GGTGTTGGGCCACCTCAGTCAGACAGCGTCACTGAA...CCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCGCTCCCCCTCTTCAGTaGCGCTGTCTGACTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KTVTSNLFSNVSPGLETAAPPLQ*RCLTEV
Trigger: CACCTCAGTCAGACAGCGTCACTGAAGAGGGGGAGC...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GCCAGAGCAGCCTCTTTCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTAGTAGTATCTATGTCTaGATCAGGCTTGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ARAASFQLWSKTFHRVGSSSIYV*IRLGAQ
Trigger: CTGAGCACCAAGCCTGATGCAGACATAGATACTACT...ACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGAAAGAGGCTGCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp CTTTCTGCACCACCATGCTGGGGAAAAGAGACGTTAAATGCAGTGCTTGACGTGATAGTTTCTGACACCTaGCGGAGGCAGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LSAPPCWGKETLNAVLDVIVSDT*RRQAVL
Trigger: AAGGACTGCCTGCCTCCGGCAGGTGTCAGAAACTAT...CACGTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AAGCTGCCTGCAGGTCACAATGACCTGACTCTACTGCGCAAGCCACTCACCACTCTCCTTTGTCATTTTTaGCTTGTCCCACTCGACAGA +
Preference number: 4 (lower is better)
Translates to: KLPAGHNDLTLLRKPLTTLLCHF*LVPLDR
Trigger: TCTGTCGAGTGGGACAAGCCAAAAATGACAAAGGAG...AGTGGTGAGTGGCTTGCGCAGTAGAGTCAGGTCATTGTGACCTGCAGGCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp GAGAAATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGGCTGGAGACGCAGCTTaGAAGCAGGTGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: EKSPDSQHFEEYATQPFRAGDAA*KQVSCK
Trigger: CTTGCAGCTCACCTGCTTCCAAGCTGCGTCTCCAGC...CCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGGCTGGAGACGCAGCTTaGAAGCAGGTGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRAGDAA*KQVSCK
Trigger: CTTGCAGCTCACCTGCTTCCAAGCTGCGTCTCCAGC...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CAA 72 bp CACTCACCACTGAGTCACAGCTCAGTGCCTGGTCACTaGGGGCACCTCAAATCTTTACAAAACACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HSPLSHSSVPGH*GHLKSLQNTAH
Trigger: ATGGGCTGTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACCAGGCACTGAGCTGTGACTCAGTGGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CTTTCTGCACCACCATGCTGGGGAAAAGAGACGTTAAATGCAGTGCTTGACGTGCTTCAAAGAAGGTACTaGGGCCGCCCTTCACATATG +
Preference number: 4 (lower is better)
Translates to: LSAPPCWGKETLNAVLDVLQRRY*GRPSHM
Trigger: CATATGTGAAGGGCGGCCTCAGTACCTTCTTTGAAG...CACGTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GGTCACTTGGGGCACCTCAAATCTTTACAAAACACAGCCCATGCCAGAGCAGCCCTATGTTTTCATGACTaGTGGAGACGCAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GHLGHLKSLQNTAHARAALCFHD*WRRSLE
Trigger: TTCCAAGCTGCGTCTCCAGCAGTCATGAAAACATAG...GGCTGCTCTGGCATGGGCTGTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp GGTCACTTGGGGCACCTCAAATCTTTACAAAACACAGCCCATGCCAGAGCAGCCCGACCTAATACTTCTTaGAACAATGTGTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: GHLGHLKSLQNTAHARAARPNTS*NNVSAV
Trigger: CACCGCTGACACATTGTTCCAAGAAGTATTAGGTCG...GGCTGCTCTGGCATGGGCTGTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp GCCAGAGCAGCCTCTTTCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTATATTGATGCATAACTaGCAAACCTCCTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: ARAASFQLWSKTFHRVGSILMHN*QTSSCV
Trigger: AACGCAGGAGGAGGTTTGCCAGTTATGCATCAATAT...ACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGAAAGAGGCTGCTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAACAGTAGGCCTAGAACATCCATTCTGCCGTaGGGAGGCAATTATGTCCAC +
Preference number: 4 (lower is better)
Translates to: NLFSNVSPGLETANSRPRTSILP*GGNYVH
Trigger: GTGGACATAATTGCCTCCTCACGGCAGAATGGATGT...TCTAGGCCTACTGTTGGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGTCACTTGGGGCACCTCAAATCTTTACAAAACACAGCCCATGCCAGAGCAGCCGGTTCCTTTACCCCCTaGCTTAGTTGTGACAATAAT +
Preference number: 4 (lower is better)
Translates to: GHLGHLKSLQNTAHARAAGSFTP*LSCDNN
Trigger: ATTATTGTCACAACTAAGTCAGGGGGTAAAGGAACC...GGCTGCTCTGGCATGGGCTGTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAGCTGCCTGCAGGTCACAATGACCTGACTCTACTGCGCAAGCCACTCACCACTACCCACACTGCAGACTaGTCTAAAATGCCTATTTTT +
Preference number: 4 (lower is better)
Translates to: KLPAGHNDLTLLRKPLTTTHTAD*SKMPIF
Trigger: AAAAATAGGCATTTTAGATCAGTCTGCAGTGTGGGT...AGTGGTGAGTGGCTTGCGCAGTAGAGTCAGGTCATTGTGACCTGCAGGCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CTTTCTGCACCACCATGCTGGGGAAAAGAGACGTTAAATGCAGTGCTTGACGTGGCTGAGAGAGCATCTTaGGCTTCAAAGAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: LSAPPCWGKETLNAVLDVAERAS*ASKKVL
Trigger: CAGTACCTTCTTTGAAGCTCAAGATGCTCTCTCAGC...CACGTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCCCCTTCTCGGAGGCTaGGTGGAAGCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFPLLGG*VEAGLP
Trigger: GGGGAGCCCTGCTTCCACTCAGCCTCCGAGAAGGGG...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp CTTTCTGCACCACCATGCTGGGGAAAAGAGACGTTAAATGCAGTGCTTGACGTGCTTCATTTGGAGAGATaGCTGTTACAAGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSAPPCWGKETLNAVLDVLHLER*LLQVGA
Trigger: AGCCCCCACTTGTAACAGGCATCTCTCCAAATGAAG...CACGTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GCCAGAGCAGCCTCTTTCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTGTGAATACCTCTGCATaGACAGCAATTATATTCACC +
Preference number: 4 (lower is better)
Translates to: ARAASFQLWSKTFHRVGSVNTSA*TAIIFT
Trigger: GGTGAATATAATTGCTGTGCATGCAGAGGTATTCAC...ACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGAAAGAGGCTGCTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCATGGAAGCAGGTGAGCTaGAAGTGCATGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPWKQVS*KCMLLL
Trigger: CAAGAGCAGCATGCACTTGCAGCTCACCTGCTTCCA...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAGGGTCACCAGGTGCATaGAGGTCGGAAAGATACCTT +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPGSPGA*RSERYL
Trigger: AAGGTATCTTTCCGACCTCCATGCACCTGGTGACCC...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGTGTCTGCATCAGGCTTaGTGCTCAGTTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRCLHQA*CSVVPG
Trigger: GCCTGGAACAACTGAGCACCAAGCCTGATGCAGACA...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCACCGAGGTCAGGTAAATaGCTACAGTGTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPPRSGK*LQCPSE
Trigger: CTCTGAGGGACACTGTAGCCATTTACCTGACCTCGG...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GAGAAATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACATCCATTCTGCCGTaGGGAGGCAATTATGTCCAC +
Preference number: 4 (lower is better)
Translates to: EKSPDSQHFEEYATQPFRTSILP*GGNYVH
Trigger: GTGGACATAATTGCCTCCTCACGGCAGAATGGATGT...CCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGATTGAAATTAAATATCCATGGGCATCTTTCTGCACCACCATGCTGGGGAAAATCATCTCGGCCAGACTaGAAGCTGCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLKLNIHGHLSAPPCWGKSSRPD*KLLPLF
Trigger: GAAGAGGGGGAGCAGCTTTCAGTCTGGCCGAGATGA...TTTTCCCCAGCATGGTGGTGCAGAAAGATGCCCATGGATATTTAATTTCAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CTTTCTGCACCACCATGCTGGGGAAAAGAGACGTTAAATGCAGTGCTTGACGTGCAGAAGTTAGGCAGCTaGCTTAACACAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSAPPCWGKETLNAVLDVQKLGS*LNTSLV
Trigger: AACCAAGCTTGTGTTAAGTCAGCTGCCTAACTTCTG...CACGTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAATTGTCAAGCCTATaGGGTCAGTGGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPKLSSL*GQWDQY
Trigger: GTACTGGTCCCACTGACCTCATAGGCTTGACAATTT...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAACAGTAGGCCTAGAGCTCTGAAGTCAAACTaGAGTCTTCATGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: NLFSNVSPGLETANSRPRALKSN*SLHGCF
Trigger: GAAGCATCCATGAAGACTTCAGTTTGACTTCAGAGC...TCTAGGCCTACTGTTGGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCCTTTTAAATAGTTTCTaGCACCTGCCGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KTVTSNLFSNVSPGLETALLNSF*HLPEAG
Trigger: GCCTGCCTCCGGCAGGTGTCAGAAACTATTTAAAAG...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAATTTCTGCTGAAGGATaGGACGCACTGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGISAEG*DALHQP
Trigger: CGGCTGATGCAGTGCGTCTCATCCTTCAGCAGAAAT...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAATTTCTGCTGAAGGATaGGACGCACTGCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: HSILKSMLHSLSGPKLAIISAEG*DALHQP
Trigger: CGGCTGATGCAGTGCGTCTCATCCTTCAGCAGAAAT...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACGTGCTCCATTTCTGCTaGAGGATGAGACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: QHFEEYATQPFRTKASNNVLHFC*RMRRTA
Trigger: TGCAGTGCGTCTCATCCTTCAGCAGAAATGGAGCAC...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAGCAGGGTCACCAGGTaGATGGAGGTCGGAAAGATA +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGSRVTR*MEVGKI
Trigger: TATCTTTCCGACCTCCATGCACCTGGTGACCCTGCT...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGTGGCTTCTCCAGGTTTaGAATCGACAACACCCTTCA +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRWLLQV*NRQHPS
Trigger: TGAAGGGTGTTGTCGATTGCAAACCTGGAGAAGCCA...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACGGGTCACCAGGTGCATaGAGGTCGGAAAGATACCTT +
Preference number: 4 (lower is better)
Translates to: QHFEEYATQPFRTKASNNGSPGA*RSERYL
Trigger: AAGGTATCTTTCCGACCTCCATGCACCTGGTGACCC...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGTTTGATCTTTCACTCTaGCCTGACTTCTCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRFDLSL*PDFSAV
Trigger: GACGGCTGAGAAGTCAGGCCAGAGTGAAAGATCAAA...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGTCTGTAACATGTCATTaGGAATCTCCAGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRSVTCH*ESPGRS
Trigger: TGACCGCCCTGGAGATTCCCAATGACATGTTACAGA...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGATGTCTGCATCAGGCTTaGTGCTCAGTTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGCLHQA*CSVVPG
Trigger: GCCTGGAACAACTGAGCACCAAGCCTGATGCAGACA...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGTGGAGTGATTCTCTATaGGATACCAGGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRWSDSL*DTRLLK
Trigger: TTTCAGCAGCCTGGTATCTCATAGAGAATCACTCCA...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATACTTCAAAGAAGGTACTaGGGCCGCCCTTCACATATG +
Preference number: 4 (lower is better)
Translates to: HSILKSMLHSLSGPKLAILQRRY*GRPSHM
Trigger: CATATGTGAAGGGCGGCCTCAGTACCTTCTTTGAAG...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAACAGTAGGCCTAGATCTGCTTCTAGTTTTTaGTGGATAGCTGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NLFSNVSPGLETANSRPRSASSF*WIAERA
Trigger: TGCTCTCTCAGCTATCCATCAAAAACTAGAAGCAGA...TCTAGGCCTACTGTTGGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGCAGCTTGGAAGCAGGTaGGCTGCAAGTGCATGCTGC +
Preference number: 4 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLQLGSR*AASACC
Trigger: GCAGCATGCACTTGCAGCTCACCTGCTTCCAAGCTG...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGAGCCGCCCTTCACATATaGCAGACTACCCTCACTCTT +
Preference number: 4 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGAALHI*QTTLTL
Trigger: AAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGGC...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GGACAAAGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGAGCAGGGTCACCAGGTaGATGGAGGTCGGAAAGATA +
Preference number: 4 (lower is better)
Translates to: GQSSKNCDFKSLLKCLTWSRVTR*MEVGKI
Trigger: TATCTTTCCGACCTCCATGCACCTGGTGACCCTGCT...CCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCTTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp ACACAGCCTTTCAGGACCAAAGCTAGCAATAACAAAAACTGTTTATTTGGATGTGGCCAGACTGAAAGCTaGTCCCCCTCTTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: TQPFRTKASNNKNCLFGCGQTES*SPSSVT
Trigger: CGTCACTGAAGAGGGGGAGCAGCTTTCAGTCTGGCC...ACATCCAAATAAACAGTTTTTGTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAGCAGGGAGTGAACAATaGTCTGTTCAAACTGACATG +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPAGSEQ*SVQTDM
Trigger: CATGTCAGTTTGAACAGAGCATTGTTCACTCCCTGC...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AGATTGAAATTAAATATCCATGGGCATCTTTCTGCACCACCATGCTGGGGAAAAATAGTTTCTGACACCTaGCGGAGGCAGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: RLKLNIHGHLSAPPCWGKIVSDT*RRQAVL
Trigger: AAGGACTGCCTGCCTCCGGCAGGTGTCAGAAACTAT...TTTTCCCCAGCATGGTGGTGCAGAAAGATGCCCATGGATATTTAATTTCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGTTTAGGCTCTTCATGTaGCCTTCTTTGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRFRLFM*PSLQSC
Trigger: GCAAGACTGCAAAGAAGGCCACATGAAGAGCCTAAA...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp GAGAAATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGTTTAGGCTCTTCATGTaGCCTTCTTTGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: EKSPDSQHFEEYATQPFRFRLFM*PSLQSC
Trigger: GCAAGACTGCAAAGAAGGCCACATGAAGAGCCTAAA...CCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAAATTGTCAAGCCTATaGGGTCAGTGGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGKLSSL*GQWDQY
Trigger: GTACTGGTCCCACTGACCTCATAGGCTTGACAATTT...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GAGAAATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGTTTTTGATGGATAGCTaGGAGAGCATCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EKSPDSQHFEEYATQPFRFLMDS*ESILSF
Trigger: GAAGCTCAAGATGCTCTCTCAGCTATCCATCAAAAA...CCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCTCATCTCGGCCAGACTaGAAGCTGCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFSSRPD*KLLPLF
Trigger: GAAGAGGGGGAGCAGCTTTCAGTCTGGCCGAGATGA...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGGGGTCTTACAGAGAAGGACAACTACTGGCTTTGTGCACTGTATTTATTAGGTAAGGACTGCAGGGAGTaGACAATGCTCTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RGLTEKDNYWLCALYLLGKDCRE*TMLCSN
Trigger: GTTTGAACAGAGCATTGTTCACTCCCTGCAGTCCTT...ACCTAATAAATACAGTGCACAAAGCCAGTAGTTGTCCTTCTCTGTAAGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CTTTCTGCACCACCATGCTGGGGAAAAGAGACGTTAAATGCAGTGCTTGACGTGACATCAACAGAAAGATaGGTAGTATCTATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSAPPCWGKETLNAVLDVTSTER*VVSMSA
Trigger: TGCAGACATAGATACTACTCATCTTTCTGTTGATGT...CACGTCAAGCACTGCATTTAACGTCTCTTTTCCCCAGCATGGTGGTGCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AGATTGAAATTAAATATCCATGGGCATCTTTCTGCACCACCATGCTGGGGAAAACTCTTCTTGTTGGCCTaGCTTTTGAGGTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: RLKLNIHGHLSAPPCWGKLFLLA*LLRLVT
Trigger: GGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAG...TTTTCCCCAGCATGGTGGTGCAGAAAGATGCCCATGGATATTTAATTTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACTGGCTTCTCCAGGTTTaGAATCGACAACACCCTTCA +
Preference number: 4 (lower is better)
Translates to: QHFEEYATQPFRTKASNNWLLQV*NRQHPS
Trigger: TGAAGGGTGTTGTCGATTGCAAACCTGGAGAAGCCA...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACATTTCAAGTCTGGCCTaGAGTGCTCCATTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QHFEEYATQPFRTKASNNISSLA*SAPFLL
Trigger: CAGCAGAAATGGAGCACTGCAGGCCAGACTTGAAAT...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACTCTGTAACATGTCATTaGGAATCTCCAGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: QHFEEYATQPFRTKASNNSVTCH*ESPGRS
Trigger: TGACCGCCCTGGAGATTCCCAATGACATGTTACAGA...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATACACAGATTTCAAGTCTaGCCTGCAGTGCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: HSILKSMLHSLSGPKLAIHRFQV*PAVLHF
Trigger: GAAATGGAGCACTGCAGGCCAGACTTGAAATCTGTG...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGATGTTTTCATGACTGCTaGAGACGCAGCTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGCFHDC*RRSLEA
Trigger: TGCTTCCAAGCTGCGTCTCCAGCAGTCATGAAAACA...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGACAGAAGTTAGGCAGCTaGCTTAACACAAGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGQKLGS*LNTSLV
Trigger: AACCAAGCTTGTGTTAAGTCAGCTGCCTAACTTCTG...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGTCTTTCACTCTGGCCTaGCTTCTCAGCCGTCTCACT +
Preference number: 4 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLSFTLA*LLSRLT
Trigger: AGTGAGACGGCTGAGAAGTCAGGCCAGAGTGAAAGA...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGAAAGGACTGCAGGGAGTaGACAATGCTCTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGKDCRE*TMLCSN
Trigger: GTTTGAACAGAGCATTGTTCACTCCCTGCAGTCCTT...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp ACACAGCCTTTCAGGACCAAAGCTAGCAATAACAAAAACTGTTTATTTGGATGTGAGCAGCTCTTCCAGTaGCTTTTTGTCCGCACCACT +
Preference number: 4 (lower is better)
Translates to: TQPFRTKASNNKNCLFGCEQLFQ*LFVRTT
Trigger: AGTGGTGCGGACAAAAAGTCACTGGAAGAGCTGCTC...ACATCCAAATAAACAGTTTTTGTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GCTTTGGAATTTAGTTTGTTTATGTCAGATATAATAACAGCACACAGGGAGGAGACCGCCATCTTGAGCTaGTCAAAACTGGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ALEFSLFMSDIITAHREETAILS*SKLVVE
Trigger: CTCCACCACCAGTTTTGAGCAGCTCAAGATGGCGGT...CTCCTCCCTGTGTGCTGTTATTATATCTGACATAAACAAACTAAATTCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAACTATCAAAAGCCTCTaGTCTGAAGTCAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPTIKSL*SEVKLK
Trigger: CTTCAGTTTGACTTCAGAGCAGAGGCTTTTGATAGT...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AGGGGTCTTACAGAGAAGGACAACTACTGGCTTTGTGCACTGTATTTATTAGGTCTATGTTTTCATGACTaGTGGAGACGCAGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RGLTEKDNYWLCALYLLGLCFHD*WRRSLE
Trigger: TTCCAAGCTGCGTCTCCAGCAGTCATGAAAACATAG...ACCTAATAAATACAGTGCACAAAGCCAGTAGTTGTCCTTCTCTGTAAGACCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AGGGGTCTTACAGAGAAGGACAACTACTGGCTTTGTGCACTGTATTTATTAGGTCTCCTTTGTCATTTTTaGCTTGTCCCACTCGACAGA +
Preference number: 4 (lower is better)
Translates to: RGLTEKDNYWLCALYLLGLLCHF*LVPLDR
Trigger: TCTGTCGAGTGGGACAAGCCAAAAATGACAAAGGAG...ACCTAATAAATACAGTGCACAAAGCCAGTAGTTGTCCTTCTCTGTAAGACCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGACACAGATTTCAAGTCTaGCCTGCAGTGCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGHRFQV*PAVLHF
Trigger: GAAATGGAGCACTGCAGGCCAGACTTGAAATCTGTG...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCACCCACACTGCAGACTaGTCTAAAATGCCTATTTTT +
Preference number: 4 (lower is better)
Translates to: KTVTSNLFSNVSPGLETATHTAD*SKMPIF
Trigger: AAAAATAGGCATTTTAGATCAGTCTGCAGTGTGGGT...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AAGAGGAGCCTACATTATCCACAGATCAGTCTGAAGAGTGAAGTGCAACAGAGGCAGCATAATATTTCTTaGAAACTTGCACCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KRSLHYPQISLKSEVQQRQHNIS*KLAPPF
Trigger: AAACGGAGGTGCAAGTTTTCAAGAAATATTATGCTG...CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGAATGCTCTGTTCAAACTaGCATGGTAGGGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGMLCSN*HGREVS
Trigger: ACTGACTTCCCTACCATGTCAGTTTGAACAGAGCAT...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCGTGCTCCATTTCTGCTaGAGGATGAGACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFVLHFC*RMRRTA
Trigger: TGCAGTGCGTCTCATCCTTCAGCAGAAATGGAGCAC...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GCTTTGGAATTTAGTTTGTTTATGTCAGATATAATAACAGCACACAGGGAGGAGCGCAGACATCCATTCTaGCGTGAGGAGGCAATTATG +
Preference number: 4 (lower is better)
Translates to: ALEFSLFMSDIITAHREERRHPF*REEAIM
Trigger: CATAATTGCCTCCTCACGGCAGAATGGATGTCTGCG...CTCCTCCCTGTGTGCTGTTATTATATCTGACATAAACAAACTAAATTCCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp ACACAGCCTTTCAGGACCAAAGCTAGCAATAACAAAAACTGTTTATTTGGATGTCTCTTCTTGTTGGCCTaGCTTTTGAGGTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: TQPFRTKASNNKNCLFGCLFLLA*LLRLVT
Trigger: GGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAG...ACATCCAAATAAACAGTTTTTGTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GCTTTGGAATTTAGTTTGTTTATGTCAGATATAATAACAGCACACAGGGAGGAGCAGGTGAGCTGCAAGTaGATGCTGCTCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: ALEFSLFMSDIITAHREEQVSCK*MLLLNL
Trigger: CAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTG...CTCCTCCCTGTGTGCTGTTATTATATCTGACATAAACAAACTAAATTCCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
3UTR CAA 72 bp GCACACAGGGAGGAGACAATGCGGTACATACTTATTTaGCAACAAAGGATTACAATTTCTACTTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: AHREETMRYILI*QQRITISTSSH
Trigger: GTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCCTCCCTGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAGAGATACCAGGCTGCTaGAAAATTCTCACTTGTAAA +
Preference number: 4 (lower is better)
Translates to: HSILKSMLHSLSGPKLAIEIPGC*KILTCK
Trigger: TTTACAAGTGAGAATTTTTCAGCAGCCTGGTATCTC...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGATTTTTGATGGATAGCTaGGAGAGCATCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGFLMDS*ESILSF
Trigger: GAAGCTCAAGATGCTCTCTCAGCTATCCATCAAAAA...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCTATTTCTTGAAAACTTaGACCTCCGTTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KTVTSNLFSNVSPGLETAYFLKT*TSVFPK
Trigger: CTTTGGGAAAACGGAGGTGCAAGTTTTCAAGAAATA...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACAGGTATTCCTTCATTTaGAGAGATGCCTGTTACAAG +
Preference number: 4 (lower is better)
Translates to: QHFEEYATQPFRTKASNNRYSFI*RDACYK
Trigger: CTTGTAACAGGCATCTCTCCAAATGAAGGAATACCT...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp ACACAGCCTTTCAGGACCAAAGCTAGCAATAACAAAAACTGTTTATTTGGATGTTTTGATCTTTCACTCTaGCCTGACTTCTCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TQPFRTKASNNKNCLFGCFDLSL*PDFSAV
Trigger: GACGGCTGAGAAGTCAGGCCAGAGTGAAAGATCAAA...ACATCCAAATAAACAGTTTTTGTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACCTAAGGATCCAACAATaGGATCTGCTTTTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: QHFEEYATQPFRTKASNNLRIQQ*DLLLAQ
Trigger: TTGAGCTAAAAGCAGATCCCATTGTTGGATCCTTAG...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGTGGAGTGATTCTCTATaGGATACCAGGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLWSDSL*DTRLLK
Trigger: TTTCAGCAGCCTGGTATCTCATAGAGAATCACTCCA...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATACAGCATAATATTTCTTaGAAACTTGCACCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: HSILKSMLHSLSGPKLAIQHNIS*KLAPPF
Trigger: AAACGGAGGTGCAAGTTTTCAAGAAATATTATGCTG...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGACTTGAATCATTTTCTTaGAATCGTTTTGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGLESFS*NRFVSA
Trigger: GGCAGAGACAAAACGATTTCAAGAAAATGATTCAAG...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGATGCTCTGTTCAAACTaGCATGGTAGGGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLMLCSN*HGREVS
Trigger: ACTGACTTCCCTACCATGTCAGTTTGAACAGAGCAT...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGGCTCTGAAGTCAAACTaGAGTCTTCATGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLALKSN*SLHGCF
Trigger: GAAGCATCCATGAAGACTTCAGTTTGACTTCAGAGC...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCTTCATTTGGAGAGATaGCTGTTACAAGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFLHLER*LLQVGA
Trigger: AGCCCCCACTTGTAACAGGCATCTCTCCAAATGAAG...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGATATTTCTTGAAAACTTaGACCTCCGTTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGYFLKT*TSVFPK
Trigger: CTTTGGGAAAACGGAGGTGCAAGTTTTCAAGAAATA...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AGATTGAAATTAAATATCCATGGGCATCTTTCTGCACCACCATGCTGGGGAAAACTAAGGATCCAACAATaGGATCTGCTTTTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RLKLNIHGHLSAPPCWGKLRIQQ*DLLLAQ
Trigger: TTGAGCTAAAAGCAGATCCCATTGTTGGATCCTTAG...TTTTCCCCAGCATGGTGGTGCAGAAAGATGCCCATGGATATTTAATTTCAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGAACATCAACAGAAAGATaGGTAGTATCTATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGTSTER*VVSMSA
Trigger: TGCAGACATAGATACTACTCATCTTTCTGTTGATGT...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR GCA 90 bp AGAGCTAATAAAAATGGTGAAATAAAGATAGGGGTCTTACAGAGAAGGACAACTAGTAGTATCTATGTCTaGATCAGGCTTGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RANKNGEIKIGVLQRRTTSSIYV*IRLGAQ
Trigger: CTGAGCACCAAGCCTGATGCAGACATAGATACTACT...AGTTGTCCTTCTCTGTAAGACCCCTATCTTTATTTCACCATTTTTATTAGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp ACACAGCCTTTCAGGACCAAAGCTAGCAATAACAAAAACTGTTTATTTGGATGTGAGATACCAGGCTGCTaGAAAATTCTCACTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TQPFRTKASNNKNCLFGCEIPGC*KILTCK
Trigger: TTTACAAGTGAGAATTTTTCAGCAGCCTGGTATCTC...ACATCCAAATAAACAGTTTTTGTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GCTTTGGAATTTAGTTTGTTTATGTCAGATATAATAACAGCACACAGGGAGGAGTTTTCAAAGAGTCGTTaGTCCAGTTCTTTCAGCGAT +
Preference number: 4 (lower is better)
Translates to: ALEFSLFMSDIITAHREEFSKSR*SSSFSD
Trigger: ATCGCTGAAAGAACTGGATCAACGACTCTTTGAAAA...CTCCTCCCTGTGTGCTGTTATTATATCTGACATAAACAAACTAAATTCCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GCTTTGGAATTTAGTTTGTTTATGTCAGATATAATAACAGCACACAGGGAGGAGTGTTACTTGCTCTATTaGGGACATTCTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: ALEFSLFMSDIITAHREECYLLY*GHSPIS
Trigger: AGAAATTGGAGAATGTCCTCAATAGAGCAAGTAACA...CTCCTCCCTGTGTGCTGTTATTATATCTGACATAAACAAACTAAATTCCAAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCAGGTATTCCTTCATTTaGAGAGATGCCTGTTACAAG +
Preference number: 4 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFRYSFI*RDACYK
Trigger: CTTGTAACAGGCATCTCTCCAAATGAAGGAATACCT...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CCA 90 bp AGAGCTAATAAAAATGGTGAAATAAAGATAGGGGTCTTACAGAGAAGGACAACTTCAGCACTCATGCCATaGAATAACACTTCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: RANKNGEIKIGVLQRRTTSALMP*NNTSKF
Trigger: GAACTTAGAAGTGTTATTCCATGGCATGAGTGCTGA...AGTTGTCCTTCTCTGTAAGACCCCTATCTTTATTTCACCATTTTTATTAGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR TCA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCTGTTACTTGCTCTATTaGGGACATTCTCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFCYLLY*GHSPIS
Trigger: AGAAATTGGAGAATGTCCTCAATAGAGCAAGTAACA...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 90 bp GGTGGCCCAACACCGAGGGGCGCACATCGTTGTCTAGGTCGAGCATaGGGCTGTGCGGGCCTGGGTGACCTTTTAGGCTCTTCATGTGGC +
Preference number: 5 (lower is better)
Translates to: GGPTPRGAHRCLGRA*GCAGLGDLLGSSCG
Trigger: GCCACATGAAGAGCCTAAAAGGTCACCCAGGCCCGCACAGCCCCATGCTCGACCTAGACAACGATGTGCGCCCCTCGGTGTTGGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp GGCCAGACTGAAAGCTGCTCCCCCTCTTCAGTGACGCTGTCTGACTaGGGTGGCCCAACACCGAGGGGCGCACATCGTTGTCTAGGTCGA +
Preference number: 5 (lower is better)
Translates to: GQTESCSPSSVTLSD*GGPTPRGAHRCLGR
Trigger: TCGACCTAGACAACGATGTGCGCCCCTCGGTGTTGGGCCACCTCAGTCAGACAGCGTCACTGAAGAGGGGGAGCAGCTTTCAGTCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp CCATGTGTCATCTCGGCCAGACTGAAAGCTGCTCCCCCTCTTCAGTaGCGCTGTCTGACTGAGGTGGCCCAACACCGAGGGGCGCACATC +
Preference number: 5 (lower is better)
Translates to: PCVISARLKAAPPLQ*RCLTEVAQHRGAHI
Trigger: GATGTGCGCCCCTCGGTGTTGGGCCACCTCAGTCAGACAGCGTCACTGAAGAGGGGGAGCAGCTTTCAGTCTGGCCGAGATGACACATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AGACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGCTGCTCTTGAACTTGTaGAGCAGCTCTTCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: RPQAFPRPCGCDRASTYRLLLNL*SSSSSD
Trigger: GTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAG...CCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp TGGCCTTCTTTGCAGTCTTGCATGAGCTTGAGGGTCCACTTGTGCTaGGCTCCAATACACTGCCAAGCAGGGTCACCAGGTGCATGGAGG +
Preference number: 5 (lower is better)
Translates to: WPSLQSCMSLRVHLC*APIHCQAGSPGAWR
Trigger: CCTCCATGCACCTGGTGACCCTGCTTGGCAGTGTATTGGAGCTCAGCACAAGTGGACCCTCAAGCTCATGCAAGACTGCAAAGAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp AGTCTGGCCTGCAGTGCTCCATTTCTGCTGAAGGATGAGACGCACTaGATCAGCCGGCTCAGCTCTTCAGAGACTGCTTCTACCACTCTG +
Preference number: 5 (lower is better)
Translates to: SLACSAPFLLKDETH*ISRLSSSETASTTL
Trigger: CAGAGTGGTAGAAGCAGTCTCTGAAGAGCTGAGCCGGCTGATGCAGTGCGTCTCATCCTTCAGCAGAAATGGAGCACTGCAGGCCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 90 bp GGAATCTCCAGGGCGGTCAGTGATTCATATGTTAGCCTTATGGTCTaGATAACGTGTGCGAGCCACTGCCCCGAAAGCTCTGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: GISRAVSDSYVSLMV*ITCASHCPESSACT
Trigger: GGTGCAGGCAGAGCTTTCGGGGCAGTGGCTCGCACACGTTATCCAGACCATAAGGCTAACATATGAATCACTGACCGCCCTGGAGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AAGCTGCCTGCAGGTCACAATGACCTGACTCTACTGCGCAAGCCACTCACCACTTTGTTGGCCTGCCTTTaGAGGTTGGTGACCGCCATC +
Preference number: 5 (lower is better)
Translates to: KLPAGHNDLTLLRKPLTTLLACL*RLVTAI
Trigger: GATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAA...AGTGGTGAGTGGCTTGCGCAGTAGAGTCAGGTCATTGTGACCTGCAGGCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTTTCATGTGGCCTTCTTaGCAGTCTTGCATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGFMWPS*QSCMSL
Trigger: CAAGCTCATGCAAGACTGCAAAGAAGGCCACATGAA...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp CTGCAAGTGCATGCTGCTCTTGAACTTGTTGAGCAGCTCTTCCAGTaGCTTTTTGTCCGCACCACTTGCAAGCTGAGGCAGGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LQVHAALELVEQLFQ*LFVRTTCKLRQGLQ
Trigger: CTGGAGGCCCTGCCTCAGCTTGCAAGTGGTGCGGACAAAAAGTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AAGCTGCCTGCAGGTCACAATGACCTGACTCTACTGCGCAAGCCACTCACCACTCCCTCACTCTTCTTGTaGGCCTGCCTTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KLPAGHNDLTLLRKPLTTPSLFL*ACLLRL
Trigger: CAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGG...AGTGGTGAGTGGCTTGCGCAGTAGAGTCAGGTCATTGTGACCTGCAGGCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTATGTCTGCATCAGGCTaGGTGCTCAGTTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCMSASG*VLSCSR
Trigger: CCTGGAACAACTGAGCACCAAGCCTGATGCAGACAT...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp ACAGATTTCAAGTCTGGCCTGCAGTGCTCCATTTCTGCTGAAGGATaGGACGCACTGCATCAGCCGGCTCAGCTCTTCAGAGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: TDFKSGLQCSISAEG*DALHQPAQLFRDCF
Trigger: GAAGCAGTCTCTGAAGAGCTGAGCCGGCTGATGCAGTGCGTCTCATCCTTCAGCAGAAATGGAGCACTGCAGGCCAGACTTGAAATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp CCGCCCTTCACATATGCCAGACTACCCTCACTCTTCTTGTTGGCCTaGCTTTTGAGGTTGGTGACCGCCATCTTGAGCTGCTCAAAACTG +
Preference number: 5 (lower is better)
Translates to: PPFTYARLPSLFLLA*LLRLVTAILSCSKL
Trigger: CAGTTTTGAGCAGCTCAAGATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp CCACTTGTGCTGAGCTCCAATACACTGCCAAGCAGGGTCACCAGGTaGATGGAGGTCGGAAAGATACCTTATGTAGCGCTTCTGGTCATG +
Preference number: 5 (lower is better)
Translates to: PLVLSSNTLPSRVTR*MEVGKIPYVALLVM
Trigger: CATGACCAGAAGCGCTACATAAGGTATCTTTCCGACCTCCATGCACCTGGTGACCCTGCTTGGCAGTGTATTGGAGCTCAGCACAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 90 bp GCTCAGCTCTTCAGAGACTGCTTCTACCACTCTGGCCAAGACCCGTaGCACCAGTTCCTTGGAAATAGTGAATACCTCTGCATGCACAGC +
Preference number: 5 (lower is better)
Translates to: AQLFRDCFYHSGQDP*HQFLGNSEYLCMHS
Trigger: GCTGTGCATGCAGAGGTATTCACTATTTCCAAGGAACTGGTGCCACGGGTCTTGGCCAGAGTGGTAGAAGCAGTCTCTGAAGAGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GACCACAAGCCTTCCCCAGGCCTTGTGGGTGTGACAGGGCCTCCACATACAGGTTTTGTCATTTTTGGCTaGTCCCACTCGACAGACAAT +
Preference number: 5 (lower is better)
Translates to: DHKPSPGLVGVTGPPHTGFVIFG*SHSTDN
Trigger: ATTGTCTGTCGAGTGGGACAAGCCAAAAATGACAAA...ACCTGTATGTGGAGGCCCTGTCACACCCACAAGGCCTGGGGAAGGCTTGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp TCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTGGCAGAGGGGGAGGGACTAGTGGAATCTGCCTaGTCTTTCCGACCTAATACT +
Preference number: 5 (lower is better)
Translates to: SSYGARHFTAWEVAEGEGLVESA*SFRPNT
Trigger: AGTATTAGGTCGGAAAGACAAGGCAGATTCCACTAG...TCCCTCCCCCTCTGCCACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GCCAGAGCAGCCTCTTTCCAGCTATGGAGCAAGACATTTCACCGCGTGGGAAGTATGCTGCTCTTGAACTaGTTGAGCAGCTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: ARAASFQLWSKTFHRVGSMLLLN*LSSSSS
Trigger: ACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCAT...ACTTCCCACGCGGTGAAATGTCTTGCTCCATAGCTGGAAAGAGGCTGCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp TTCATGACTGCTGGAGACGCAGCTTGGAAGCAGGTGAGCTGCAAGTaGATGCTGCTCTTGAACTTGTTGAGCAGCTCTTCCAGTGACTTT +
Preference number: 5 (lower is better)
Translates to: FMTAGDAAWKQVSCK*MLLLNLLSSSSSDF
Trigger: AAAGTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTGCTTCCAAGCTGCGTCTCCAGCAGTCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp TGCTTGACGTGTAATCTCTGCTGCACAGCACGAGGACAGTCTCCACCGCCATGTTCTGGTCATGTAAGGTaGATGGAGTCTCGAGCAATT +
Preference number: 5 (lower is better)
Translates to: CLTCNLCCTARGQSPPPCSGHVR*MESRAI
Trigger: AATTGCTCGAGACTCCATCAACCTTACATGACCAGA...ACATGGCGGTGGAGACTGTCCTCGTGCTGTGCAGCAGAGATTACACGTCAAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GAGAAATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGTTTTGTCCGCACCACTaGCAAGCTGAGGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: EKSPDSQHFEEYATQPFRFCPHH*QAEAGP
Trigger: AGGCCCTGCCTCAGCTTGCAAGTGGTGCGGACAAAA...CCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp AGCATCTTGAGCTTCAAAGAAGGTACTGAGGCCGCCCTTCACATATaGCAGACTACCCTCACTCTTCTTGTTGGCCTGCCTTTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SILSFKEGTEAALHI*QTTLTLLVGLPFEV
Trigger: AACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGGCCTCAGTACCTTCTTTGAAGCTCAAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp TATGTTTTCATGACTGCTGGAGACGCAGCTTGGAAGCAGGTGAGCTaGAAGTGCATGCTGCTCTTGAACTTGTTGAGCAGCTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: YVFMTAGDAAWKQVS*KCMLLLNLLSSSSS
Trigger: ACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTGCTTCCAAGCTGCGTCTCCAGCAGTCATGAAAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAACAGTAGGCCTAGACTACCCTCACTCTTCTaGTTGGCCTGCCTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: NLFSNVSPGLETANSRPRLPSLF*LACLLR
Trigger: CCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAG...TCTAGGCCTACTGTTGGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GGTCACTTGGGGCACCTCAAATCTTTACAAAACACAGCCCATGCCAGAGCAGCCAGGCTTGGTGCTCAGTaGTTCCAGGCAGTATATAAA +
Preference number: 5 (lower is better)
Translates to: GHLGHLKSLQNTAHARAARLGAQ*FQAVYK
Trigger: TTTATATACTGCCTGGAACAACTGAGCACCAAGCCT...GGCTGCTCTGGCATGGGCTGTGTTTTGTAAAGATTTGAGGTGCCCCAAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAACAGTAGGCCTAGACTGCTCTTGAACTTGTaGAGCAGCTCTTCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: NLFSNVSPGLETANSRPRLLLNL*SSSSSD
Trigger: GTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAG...TCTAGGCCTACTGTTGGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp ATATTGATGCATAACTGGCAAACCTCCTCCTGCGTTTTAGGCTGTTaGAAGACGCTGGCTTCTCCAGGTTTGCAATCGACAACACCCTTC +
Preference number: 5 (lower is better)
Translates to: ILMHNWQTSSCVLGC*KTLASPGLQSTTPF
Trigger: GAAGGGTGTTGTCGATTGCAAACCTGGAGAAGCCAGCGTCTTTCAACAGCCTAAAACGCAGGAGGAGGTTTGCCAGTTATGCATCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp GGCTTGTCCCACTCGACAGACAATTTTACTCGCAGACATCCATTCTaGCGTGAGGAGGCAATTATGTCCACAAATTGTCAAGCCTATGAG +
Preference number: 5 (lower is better)
Translates to: GLSHSTDNFTRRHPF*REEAIMSTNCQAYE
Trigger: CTCATAGGCTTGACAATTTGTGGACATAATTGCCTCCTCACGGCAGAATGGATGTCTGCGAGTAAAATTGTCTGTCGAGTGGGACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGATTGTTGGCCTGCCTTTaGAGGTTGGTGACCGCCATC +
Preference number: 5 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGLLACL*RLVTAI
Trigger: GATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAA...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCCTACCCTCACTCTTCTaGTTGGCCTGCCTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: KTVTSNLFSNVSPGLETALPSLF*LACLLR
Trigger: CCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAG...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCATCTCCTTTGTCATTTTaGGCTTGTCCCACTCGACAG +
Preference number: 5 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPSPLSF*ACPTRQ
Trigger: CTGTCGAGTGGGACAAGCCAAAAATGACAAAGGAGA...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 90 bp GTTTGCAATCGACAACACCCTTCAAGGACTGCAGGGAGTGAACAATaGTCTGTTCAAACTGACATGGTAGGGAAGTCAGTCCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: VCNRQHPSRTAGSEQ*SVQTDMVGKSVLHY
Trigger: ATAATGAAGGACTGACTTCCCTACCATGTCAGTTTGAACAGAGCATTGTTCACTCCCTGCAGTCCTTGAAGGGTGTTGTCGATTGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 90 bp GCGTTCCTAGTGGAATCTGCCTTGTCTTTCCGACCTAATACTTCTTaGAACAATGTGTCAGCGGTGTTACTTGCTCTATTGAGGACATTC +
Preference number: 5 (lower is better)
Translates to: AFLVESALSFRPNTS*NNVSAVLLALLRTF
Trigger: GAATGTCCTCAATAGAGCAAGTAACACCGCTGACACATTGTTCCAAGAAGTATTAGGTCGGAAAGACAAGGCAGATTCCACTAGGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGACCCTCACTCTTCTTGTaGGCCTGCCTTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGPSLFL*ACLLRL
Trigger: CAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGG...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp ACACAGCCTTTCAGGACCAAAGCTAGCAATAACAAAAACTGTTTATTTGGATGTTTTTGTCCGCACCACTaGCAAGCTGAGGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: TQPFRTKASNNKNCLFGCFCPHH*QAEAGP
Trigger: AGGCCCTGCCTCAGCTTGCAAGTGGTGCGGACAAAA...ACATCCAAATAAACAGTTTTTGTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AGGGGTCTTACAGAGAAGGACAACTACTGGCTTTGTGCACTGTATTTATTAGGTTTCATGTGGCCTTCTTaGCAGTCTTGCATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: RGLTEKDNYWLCALYLLGFMWPS*QSCMSL
Trigger: CAAGCTCATGCAAGACTGCAAAGAAGGCCACATGAA...ACCTAATAAATACAGTGCACAAAGCCAGTAGTTGTCCTTCTCTGTAAGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGATCTGCCTCACATTCTTaGATCTTTCACTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGSASHS*IFHSGL
Trigger: CAGGCCAGAGTGAAAGATCAAAGAATGTGAGGCAGA...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGAAACTGCCAGGCTTGGTGCTCAGTaGTTCCAGGCAGTATATAAA +
Preference number: 5 (lower is better)
Translates to: KTVTSNLFSNVSPGLETARLGAQ*FQAVYK
Trigger: TTTATATACTGCCTGGAACAACTGAGCACCAAGCCT...GGCAGTTTCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACCGTGGCACCAGTTCCTaGGAAATAGTGAATACCTCT +
Preference number: 5 (lower is better)
Translates to: QHFEEYATQPFRTKASNNRGTSS*EIVNTS
Trigger: AGAGGTATTCACTATTTCCAAGGAACTGGTGCCACG...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 90 bp AATGTCACCATTATGCAACGTATTCGGAGATCCAAAATTAGGTCCTaGATAATCTGTAACATGTCATTGGGAATCTCCAGGGCGGTCAGT +
Preference number: 5 (lower is better)
Translates to: NVTIMQRIRRSKIRS*IICNMSLGISRAVS
Trigger: ACTGACCGCCCTGGAGATTCCCAATGACATGTTACAGATTATCCAGGACCTAATTTTGGATCTCCGAATACGTTGCATAATGGTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGATCTCCTTTGTCATTTTaGGCTTGTCCCACTCGACAG +
Preference number: 5 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGSPLSF*ACPTRQ
Trigger: CTGTCGAGTGGGACAAGCCAAAAATGACAAAGGAGA...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATACTAGTGGAATCTGCCTaGTCTTTCCGACCTAATACT +
Preference number: 5 (lower is better)
Translates to: HSILKSMLHSLSGPKLAILVESA*SFRPNT
Trigger: AGTATTAGGTCGGAAAGACAAGGCAGATTCCACTAG...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp CAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATAACTCTGGTCATGTAAGGTaGATGGAGTCTCGAGCAATT +
Preference number: 5 (lower is better)
Translates to: QHFEEYATQPFRTKASNNSGHVR*MESRAI
Trigger: AATTGCTCGAGACTCCATCAACCTTACATGACCAGA...GTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GCTTTGGAATTTAGTTTGTTTATGTCAGATATAATAACAGCACACAGGGAGGAGATGTCTGCATCAGGCTaGGTGCTCAGTTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ALEFSLFMSDIITAHREEMSASG*VLSCSR
Trigger: CCTGGAACAACTGAGCACCAAGCCTGATGCAGACAT...CTCCTCCCTGTGTGCTGTTATTATATCTGACATAAACAAACTAAATTCCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AATCCCCAGACTCACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAATTTTCAAAGAGTCGTaGATCCAGTTCTTTCAGCGA +
Preference number: 5 (lower is better)
Translates to: NPQTHSILKSMLHSLSGPIFKES*IQFFQR
Trigger: TCGCTGAAAGAACTGGATCAACGACTCTTTGAAAAT...TGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTGAGTCTGGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AGATTGAAATTAAATATCCATGGGCATCTTTCTGCACCACCATGCTGGGGAAAAATGCTGCTCTTGAACTaGTTGAGCAGCTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: RLKLNIHGHLSAPPCWGKMLLLN*LSSSSS
Trigger: ACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCAT...TTTTCCCCAGCATGGTGGTGCAGAAAGATGCCCATGGATATTTAATTTCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GGACAAAGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGAAGTGCATGCTGCTCTaGAACTTGTTGAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GQSSKNCDFKSLLKCLTWKCMLL*NLLSSS
Trigger: AGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTT...CCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCTTTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GGGAGAAATGAAAGTCAGACTATGAAATTCAGAGTTCATACGAGGACTTGTGGAAAGTGCATGCTGCTCTaGAACTTGTTGAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GRNESQTMKFRVHTRTCGKCMLL*NLLSSS
Trigger: AGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTT...TCCACAAGTCCTCGTATGAACTCTGAATTTCATAGTCTGACTTTCATTTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 90 bp TTGAAATCGTTTTGTCTCTGCCTCACATTCTTTGATCTTTCACTCTaGCCTGACTTCTCAGCCGTCTCACTGAAAAGACTTCCATTAACA +
Preference number: 5 (lower is better)
Translates to: LKSFCLCLTFFDLSL*PDFSAVSLKRLPLT
Trigger: TGTTAATGGAAGTCTTTTCAGTGAGACGGCTGAGAAGTCAGGCCAGAGTGAAAGATCAAAGAATGTGAGGCAGAGACAAAACGATTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GGAGACAATGCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCTTGGTGACCGCCATCTaGAGCTGCTCAAAACTGGTG +
Preference number: 5 (lower is better)
Translates to: GDNAVHTYFATKDYNFYFLVTAI*SCSKLV
Trigger: CACCAGTTTTGAGCAGCTCAAGATGGCGGTCACCAA...GAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGCATTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp TTCCGTTTAATATTGAGAGGAAGGTTGAAGAGAAATTTAAATCGCTaGAGTACGTTGAGGGCGTTCCTAGTGGAATCTGCCTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: FRLILRGRLKRNLNR*STLRAFLVESALSF
Trigger: GAAAGACAAGGCAGATTCCACTAGGAACGCCCTCAACGTACTTCAGCGATTTAAATTTCTCTTCAACCTTCCTCTCAATATTAAACGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp ACACAGCCTTTCAGGACCAAAGCTAGCAATAACAAAAACTGTTTATTTGGATGTTCTGCCTCACATTCTTaGATCTTTCACTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: TQPFRTKASNNKNCLFGCSASHS*IFHSGL
Trigger: CAGGCCAGAGTGAAAGATCAAAGAATGTGAGGCAGA...ACATCCAAATAAACAGTTTTTGTTATTGCTAGCTTTGGTCCTGAAAGGCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGCGTGGCACCAGTTCCTaGGAAATAGTGAATACCTCT +
Preference number: 5 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLRGTSS*EIVNTS
Trigger: AGAGGTATTCACTATTTCCAAGGAACTGGTGCCACG...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp AGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGGCTGGATTTCTTGAAATCGTTTaGTCTCTGCCTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: SSKNCDFKSLLKCLTWAGFLEIV*SLPHIL
Trigger: AAGAATGTGAGGCAGAGACAAAACGATTTCAAGAAA...TCCAGCCCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp CACAGCATTTTGAAGAGTATGCTACACAGCCTTTCAGGACCAAAGCTAGCAATATTTCTTGAAATCGTTTaGTCTCTGCCTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: HSILKSMLHSLSGPKLAIFLEIV*SLPHIL
Trigger: AAGAATGTGAGGCAGAGACAAAACGATTTCAAGAAA...TATTGCTAGCTTTGGTCCTGAAAGGCTGTGTAGCATACTCTTCAAAATGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GGACAAAGCTCTAAAAACTGTGACTTCAAATCTCTTCTCAAATGTCTCACCTGGATTTTCAAAGAGTCGTaGATCCAGTTCTTTCAGCGA +
Preference number: 5 (lower is better)
Translates to: GQSSKNCDFKSLLKCLTWIFKES*IQFFQR
Trigger: TCGCTGAAAGAACTGGATCAACGACTCTTTGAAAAT...CCAGGTGAGACATTTGAGAAGAGATTTGAAGTCACAGTTTTTAGAGCTTTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 90 bp CTTCCATTAACATATGAAATCCAGAGTTTCCAGAAGTTAGGCAGCTaGCTTAACACAAGCTTGGTTAATTTTTCAACAAATGCCACTCTG +
Preference number: 5 (lower is better)
Translates to: LPLTYEIQSFQKLGS*LNTSLVNFSTNATL
Trigger: CAGAGTGGCATTTGTTGAAAAATTAACCAAGCTTGTGTTAAGTCAGCTGCCTAACTTCTGGAAACTCTGGATTTCATATGTTAATGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS-3UTR CAA 90 bp GCGGTACATACTTATTTTGCAACAAAGGATTACAATTTCTACTTCCAGTCACTGACAATAATGTCTCCTTaGTCATTTTTGGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: AVHTYFATKDYNFYFQSLTIMSP*SFLACP
Trigger: GGGACAAGCCAAAAATGACAAAGGAGACATTATTGT...CAGTGACTGGAAGTAGAAATTGTAATCCTTTGTTGCAAAATAAGTATGTACCGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp CTGGATAACGTGTGCGAGCCACTGCCCCGAAAGCTCTaGCTGCACCTCCCAGCCGCCATACTGCCTCCCATC +
Preference number: 6 (lower is better)
Translates to: LDNVCEPLPRKL*LHLPAAILPPI
Trigger: GATGGGAGGCAGTATGGCGGCTGGGAGGTGCAGGCAGAGCTTTCGGGGCAGTGGCTCGCACACGTTATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 72 bp ACACCGAGGGGCGCACATCGTTGTCTAGGTCGAGCATaGGGCTGTGCGGGCCTGGGTGACCTTTTAGGCTCT +
Preference number: 6 (lower is better)
Translates to: TPRGAHRCLGRA*GCAGLGDLLGS
Trigger: AGAGCCTAAAAGGTCACCCAGGCCCGCACAGCCCCATGCTCGACCTAGACAACGATGTGCGCCCCTCGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp GAAAGCTGCTCCCCCTCTTCAGTGACGCTGTCTGACTaGGGTGGCCCAACACCGAGGGGCGCACATCGTTGT +
Preference number: 6 (lower is better)
Translates to: ESCSPSSVTLSD*GGPTPRGAHRC
Trigger: ACAACGATGTGCGCCCCTCGGTGTTGGGCCACCTCAGTCAGACAGCGTCACTGAAGAGGGGGAGCAGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp GACGCACTGCATCAGCCGGCTCAGCTCTTCAGAGACTaGTTCTACCACTCTGGCCAAGACCCGTGGCACCAG +
Preference number: 6 (lower is better)
Translates to: DALHQPAQLFRD*FYHSGQDPWHQ
Trigger: CTGGTGCCACGGGTCTTGGCCAGAGTGGTAGAAGCAGTCTCTGAAGAGCTGAGCCGGCTGATGCAGTGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp CTGAGGCCGCCCTTCACATATGCCAGACTACCCTCACTCTTCTTGTaGGCCTGCCTTTTGAGGTTGGTGACCGCCATCTTGAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LRPPFTYARLPSLFL*ACLLRLVTAILSCS
Trigger: TGAGCAGCTCAAGATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp GTACTGAGGCCGCCCTTCACATATGCCAGACTACCCTCACTCTTCTaGTTGGCCTGCCTTTTGAGGTTGGTGACCGCCATCTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: VLRPPFTYARLPSLF*LACLLRLVTAILSC
Trigger: GCAGCTCAAGATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGGCCTCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp AAGTCTGGCCTGCAGTGCTCCATTTCTGCTGAAGGATaGGACGCACTGCATCAGCCGGCTCAGCTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: KSGLQCSISAEG*DALHQPAQLFR
Trigger: TCTGAAGAGCTGAGCCGGCTGATGCAGTGCGTCTCATCCTTCAGCAGAAATGGAGCACTGCAGGCCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp GCTGGAGACGCAGCTTGGAAGCAGGTGAGCTGCAAGTaGATGCTGCTCTTGAACTTGTTGAGCAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: AGDAAWKQVSCK*MLLLNLLSSSS
Trigger: GGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTGCTTCCAAGCTGCGTCTCCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp CCGCCCTTCACATATGCCAGACTACCCTCACTCTTCTaGTTGGCCTGCCTTTTGAGGTTGGTGACCGCCATC +
Preference number: 6 (lower is better)
Translates to: PPFTYARLPSLF*LACLLRLVTAI
Trigger: GATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp TTGCAGTCTTGCATGAGCTTGAGGGTCCACTTGTGCTaGGCTCCAATACACTGCCAAGCAGGGTCACCAGGT +
Preference number: 6 (lower is better)
Translates to: LQSCMSLRVHLC*APIHCQAGSPG
Trigger: ACCTGGTGACCCTGCTTGGCAGTGTATTGGAGCTCAGCACAAGTGGACCCTCAAGCTCATGCAAGACTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp TGCAGTGCTCCATTTCTGCTGAAGGATGAGACGCACTaGATCAGCCGGCTCAGCTCTTCAGAGACTGCTTCT +
Preference number: 6 (lower is better)
Translates to: CSAPFLLKDETH*ISRLSSSETAS
Trigger: AGAAGCAGTCTCTGAAGAGCTGAGCCGGCTGATGCAGTGCGTCTCATCCTTCAGCAGAAATGGAGCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp ACATATGCCAGACTACCCTCACTCTTCTTGTTGGCCTaGCTTTTGAGGTTGGTGACCGCCATCTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: TYARLPSLFLLA*LLRLVTAILSC
Trigger: GCAGCTCAAGATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp AGCTTCAAAGAAGGTACTGAGGCCGCCCTTCACATATaGCAGACTACCCTCACTCTTCTTGTTGGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: SFKEGTEAALHI*QTTLTLLVGLP
Trigger: AGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGTGAAGGGCGGCCTCAGTACCTTCTTTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 72 bp AGGGCGGTCAGTGATTCATATGTTAGCCTTATGGTCTaGATAACGTGTGCGAGCCACTGCCCCGAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: RAVSDSYVSLMV*ITCASHCPESS
Trigger: AGAGCTTTCGGGGCAGTGGCTCGCACACGTTATCCAGACCATAAGGCTAACATATGAATCACTGACCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp GCCAGACTACCCTCACTCTTCTTGTTGGCCTGCCTTTaGAGGTTGGTGACCGCCATCTTGAGCTGCTCAAAA +
Preference number: 6 (lower is better)
Translates to: ARLPSLFLLACL*RLVTAILSCSK
Trigger: TTTTGAGCAGCTCAAGATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp GCTTGGAAGCAGGTGAGCTGCAAGTGCATGCTGCTCTTGAACTTGTaGAGCAGCTCTTCCAGTGACTTTTTGTCCGCACCACTTGCAAGC +
Preference number: 6 (lower is better)
Translates to: AWKQVSCKCMLLLNL*SSSSSDFLSAPLAS
Trigger: GCTTGCAAGTGGTGCGGACAAAAAGTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTGCTTCCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp GCAGCTTGGAAGCAGGTGAGCTGCAAGTGCATGCTGCTCTTGAACTaGTTGAGCAGCTCTTCCAGTGACTTTTTGTCCGCACCACTTGCA +
Preference number: 6 (lower is better)
Translates to: AAWKQVSCKCMLLLN*LSSSSSDFLSAPLA
Trigger: TGCAAGTGGTGCGGACAAAAAGTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTGCTTCCAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp TTCACATATGCCAGACTACCCTCACTCTTCTTGTTGGCCTGCCTTTaGAGGTTGGTGACCGCCATCTTGAGCTGCTCAAAACTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: FTYARLPSLFLLACL*RLVTAILSCSKLVV
Trigger: CACCACCAGTTTTGAGCAGCTCAAGATGGCGGTCACCAACCTCAAAAGGCAGGCCAACAAGAAGAGTGAGGGTAGTCTGGCATATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp CATGCTGCTCTTGAACTTGTTGAGCAGCTCTTCCAGTaGCTTTTTGTCCGCACCACTTGCAAGCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: HAALELVEQLFQ*LFVRTTCKLRQ
Trigger: CTGCCTCAGCTTGCAAGTGGTGCGGACAAAAAGTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp CAGGTGAGCTGCAAGTGCATGCTGCTCTTGAACTTGTaGAGCAGCTCTTCCAGTGACTTTTTGTCCGCACCA +
Preference number: 6 (lower is better)
Translates to: QVSCKCMLLLNL*SSSSSDFLSAP
Trigger: TGGTGCGGACAAAAAGTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp CATAACTGGCAAACCTCCTCCTGCGTTTTAGGCTGTTaGAAGACGCTGGCTTCTCCAGGTTTGCAATCGACA +
Preference number: 6 (lower is better)
Translates to: HNWQTSSCVLGC*KTLASPGLQST
Trigger: TGTCGATTGCAAACCTGGAGAAGCCAGCGTCTTTCAACAGCCTAAAACGCAGGAGGAGGTTTGCCAGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp CGACAACACCCTTCAAGGACTGCAGGGAGTGAACAATaGTCTGTTCAAACTGACATGGTAGGGAAGTCAGTC +
Preference number: 6 (lower is better)
Translates to: RQHPSRTAGSEQ*SVQTDMVGKSV
Trigger: GACTGACTTCCCTACCATGTCAGTTTGAACAGAGCATTGTTCACTCCCTGCAGTCCTTGAAGGGTGTTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp TCTACCACTCTGGCCAAGACCCGTGGCACCAGTTCCTaGGAAATAGTGAATACCTCTGCATGCACAGCAATT +
Preference number: 6 (lower is better)
Translates to: STTLAKTRGTSS*EIVNTSACTAI
Trigger: AATTGCTGTGCATGCAGAGGTATTCACTATTTCCAAGGAACTGGTGCCACGGGTCTTGGCCAGAGTGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp AAGCAGGTGAGCTGCAAGTGCATGCTGCTCTTGAACTaGTTGAGCAGCTCTTCCAGTGACTTTTTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: KQVSCKCMLLLN*LSSSSSDFLSA
Trigger: TGCGGACAAAAAGTCACTGGAAGAGCTGCTCAACAAGTTCAAGAGCAGCATGCACTTGCAGCTCACCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp GAGACTGCTTCTACCACTCTGGCCAAGACCCGTGGCACCAGTTCCTaGGAAATAGTGAATACCTCTGCATGCACAGCAATTATATTCACC +
Preference number: 6 (lower is better)
Translates to: ETASTTLAKTRGTSS*EIVNTSACTAIIFT
Trigger: GGTGAATATAATTGCTGTGCATGCAGAGGTATTCACTATTTCCAAGGAACTGGTGCCACGGGTCTTGGCCAGAGTGGTAGAAGCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 72 bp TCTAATTGTGACTTTGGTCCAAGGTATTCCTTCATTTaGAGAGATGCCTGTTACAAGTGGGGGCTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: SNCDFGPRYSFI*RDACYKWGLPG
Trigger: TCCCGGCAGCCCCCACTTGTAACAGGCATCTCTCCAAATGAAGGAATACCTTGGACCAAAGTCACAATTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp GACAGACAATTTTACTCGCAGACATCCATTCTGCCGTaGGGAGGCAATTATGTCCACAAATTGTCAAGCCTA +
Preference number: 6 (lower is better)
Translates to: DRQFYSQTSILP*GGNYVHKLSSL
Trigger: TAGGCTTGACAATTTGTGGACATAATTGCCTCCTCACGGCAGAATGGATGTCTGCGAGTAAAATTGTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp GGTGGTGGAGTGATTCTCTATGAGATACCAGGCTGCTaGAAAATTCTCACTTGTAAAATCAGCACTCATGCC +
Preference number: 6 (lower is better)
Translates to: GGGVILYEIPGC*KILTCKISTHA
Trigger: GGCATGAGTGCTGATTTTACAAGTGAGAATTTTTCAGCAGCCTGGTATCTCATAGAGAATCACTCCACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp CACTCGACAGACAATTTTACTCGCAGACATCCATTCTaGCGTGAGGAGGCAATTATGTCCACAAATTGTCAA +
Preference number: 6 (lower is better)
Translates to: HSTDNFTRRHPF*REEAIMSTNCQ
Trigger: TTGACAATTTGTGGACATAATTGCCTCCTCACGGCAGAATGGATGTCTGCGAGTAAAATTGTCTGTCGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp AGTTCTTCTGAGGAAGTTTACATTTCTCAATTTCAATaGCAAGAGGATTCGCAGGACGGAGAGACAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SSSEEVYISQFQ*QEDSQDGETRE
Trigger: CTCCCTTGTCTCTCCGTCCTGCGAATCCTCTTGGCATTGAAATTGAGAAATGTAAACTTCCTCAGAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp TTATCTCTTCGGCCGTATGCTGCAATGTCACCATTATaGAACGTATTCGGAGATCCAAAATTAGGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: LSLRPYAAMSPL*NVFGDPKLGPG
Trigger: TCCAGGACCTAATTTTGGATCTCCGAATACGTTGCATAATGGTGACATTGCAGCATACGGCCGAAGAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 72 bp GTGGAATCTGCCTTGTCTTTCCGACCTAATACTTCTTaGAACAATGTGTCAGCGGTGTTACTTGCTCTATTG +
Preference number: 6 (lower is better)
Translates to: VESALSFRPNTS*NNVSAVLLALL
Trigger: CAATAGAGCAAGTAACACCGCTGACACATTGTTCCAAGAAGTATTAGGTCGGAAAGACAAGGCAGATTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CCA 72 bp TTTTGTCTCTGCCTCACATTCTTTGATCTTTCACTCTaGCCTGACTTCTCAGCCGTCTCACTGAAAAGACTT +
Preference number: 6 (lower is better)
Translates to: FCLCLTFFDLSL*PDFSAVSLKRL
Trigger: AAGTCTTTTCAGTGAGACGGCTGAGAAGTCAGGCCAGAGTGAAAGATCAAAGAATGTGAGGCAGAGACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp ATATTGAGAGGAAGGTTGAAGAGAAATTTAAATCGCTaGAGTACGTTGAGGGCGTTCCTAGTGGAATCTGCC +
Preference number: 6 (lower is better)
Translates to: ILRGRLKRNLNR*STLRAFLVESA
Trigger: GGCAGATTCCACTAGGAACGCCCTCAACGTACTTCAGCGATTTAAATTTCTCTTCAACCTTCCTCTCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS TCA 72 bp TCAGGACTATCAAAAGCCTCTGCTCTGAAGTCAAACTaGAGTCTTCATGGATGCTTCCAAACAAATCAGGAG +
Preference number: 6 (lower is better)
Translates to: SGLSKASALKSN*SLHGCFQTNQE
Trigger: CTCCTGATTTGTTTGGAAGCATCCATGAAGACTTCAGTTTGACTTCAGAGCAGAGGCTTTTGATAGTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp TTTTCAGCTAATCTCTTTATCTCTTCGGCCGTATGCTaGAATGTCACCATTATGCAACGTATTCGGAGATCC +
Preference number: 6 (lower is better)
Translates to: FSANLFISSAVC*NVTIMQRIRRS
Trigger: GGATCTCCGAATACGTTGCATAATGGTGACATTGCAGCATACGGCCGAAGAGATAAAGAGATTAGCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp AGAAACATCAACAGAAAGATGAGTAGTATCTATGTCTaGATCAGGCTTGGTGCTCAGTTGTTCCAGGCAGTA +
Preference number: 6 (lower is better)
Translates to: RNINRKMSSIYV*IRLGAQLFQAV
Trigger: TACTGCCTGGAACAACTGAGCACCAAGCCTGATGCAGACATAGATACTACTCATCTTTCTGTTGATGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp GGAGGTCGGAAAGATACCTTATGTAGCGCTTCTGGTCATGTAAGGTaGATGGAGTCTCGAGCAATTTCTTTAGAAGTAACTCTCTTAGAT +
Preference number: 6 (lower is better)
Translates to: GGRKDTLCSASGHVR*MESRAISLEVTLLD
Trigger: ATCTAAGAGAGTTACTTCTAAAGAAATTGCTCGAGACTCCATCAACCTTACATGACCAGAAGCGCTACATAAGGTATCTTTCCGACCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 90 bp ATTCGGAGATCCAAAATTAGGTCCTGGATAATCTGTAACATGTCATaGGGAATCTCCAGGGCGGTCAGTGATTCATATGTTAGCCTTATG +
Preference number: 6 (lower is better)
Translates to: IRRSKIRSWIICNMS*GISRAVSDSYVSLM
Trigger: CATAAGGCTAACATATGAATCACTGACCGCCCTGGAGATTCCCAATGACATGTTACAGATTATCCAGGACCTAATTTTGGATCTCCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS GCA 72 bp TCTTTTTCAGCTAATCTCTTTATCTCTTCGGCCGTATaGTGCAATGTCACCATTATGCAACGTATTCGGAGA +
Preference number: 6 (lower is better)
Translates to: SFSANLFISSAV*CNVTIMQRIRR
Trigger: TCTCCGAATACGTTGCATAATGGTGACATTGCAGCATACGGCCGAAGAGATAAAGAGATTAGCTGAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp TTACCCCCTGACTTAGTTGTGACAATAATGTCTCCTTaGTCATTTTTGGCTTGTCCCACTCGACAGACAATT +
Preference number: 6 (lower is better)
Translates to: LPPDLVVTIMSP*SFLACPTRQTI
Trigger: AATTGTCTGTCGAGTGGGACAAGCCAAAAATGACAAAGGAGACATTATTGTCACAACTAAGTCAGGGGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp AGTAGTATCTATGTCTGCATCAGGCTTGGTGCTCAGTaGTTCCAGGCAGTATATAAAAACCTGCATGATATT +
Preference number: 6 (lower is better)
Translates to: SSIYVCIRLGAQ*FQAVYKNLHDI
Trigger: AATATCATGCAGGTTTTTATATACTGCCTGGAACAACTGAGCACCAAGCCTGATGCAGACATAGATACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8
CDS CAA 72 bp AAAGATACCTTATGTAGCGCTTCTGGTCATGTAAGGTaGATGGAGTCTCGAGCAATTTCTTTAGAAGTAACT +
Preference number: 6 (lower is better)
Translates to: KDTLCSASGHVR*MESRAISLEVT
Trigger: AGTTACTTCTAAAGAAATTGCTCGAGACTCCATCAACCTTACATGACCAGAAGCGCTACATAAGGTATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021785.8
ENSMUST00000102946.8