Pregenerated sensors for EXO5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028629Ensembl transcript IDs: ENSMUST00000030375.9, ENSMUST00000144114.2, ENSMUST00000156836.2, ENSMUST00000177880.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCTTTGCTGCACTGATGTATATCTGTCTTCTTTGCAGTTTACCTaGAAGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTT | + |
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Preference number: 1 (lower is better) Translates to: YLCCTDVYLSSLQFT*KLQGHSNTTSLHIL Trigger: AAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCTTTCAGGTAAACTGCAAAGAAGACAGATATACATCAGTGCAGCAAAGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGATGGAACCACGAGAGCCAAGCTaGGAGACTGGTCCTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: VTLTPHLSTFLIFGPGMEPREPS*ETGPLT Trigger: TGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGG...TTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| 3UTR TCA 72 bp | TGCACTGATGTATATCTGTCTTCTTTGCAGTTTACCTaGAAGCTCCAAGGTCACTCTAACACCACATCTCTC | + |
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Preference number: 3 (lower is better) Translates to: CTDVYLSSLQFT*KLQGHSNTTSL Trigger: GAGAGATGTGGTGTTAGAGTGACCTTGGAGCTTTCAGGTAAACTGCAAAGAAGACAGATATACATCAGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| 3UTR CCA 72 bp | CACTCTAACACCACATCTCTCCACATTCTTGATCTTTaGCCCTGGGATGGAATGTTATTCAAGATTGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: HSNTTSLHILDL*PWDGMLFKIVN Trigger: GTTTACAATCTTGAATAACATTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| 3UTR TCA 72 bp | TTTATCAGAATCCAAAGAATTTTCTTGAGCCAACAGTaGTTAGTGAGGGATACCTTTGCTGCACTGATGTAT | + |
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Preference number: 3 (lower is better) Translates to: FIRIQRIFLSQQ*LVRDTFAALMY Trigger: ATACATCAGTGCAGCAAAGGTATCCCTCACTAATCACTGTTGGCTCAAGAAAATTCTTTGGATTCTGATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| 3UTR CCA 72 bp | AACACCACATCTCTCCACATTCTTGATCTTTGGCCCTaGGATGGAATGTTATTCAAGATTGTAAACATAAAA | + |
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Preference number: 3 (lower is better) Translates to: NTTSLHILDLWP*DGMLFKIVNIK Trigger: TTTTATGTTTACAATCTTGAATAACATTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGTTTGGGCTCCCACGATaGGCTGAGCACTCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWFGLPR*AEHSTA Trigger: GGCAGTGGAGTGCTCAGCTCATCGTGGGAGCCCAAA...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTTTTGGGCTCCCACGATaGGCTGAGCACTCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPFGLPR*AEHSTA Trigger: GGCAGTGGAGTGCTCAGCTCATCGTGGGAGCCCAAA...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGCACCTCCCCAAACACTaGAAACTCTCTGACGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWHLPKH*KLSDAP Trigger: GGGCGCGTCAGAGAGTTTCCAGTGTTTGGGGAGGTG...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGGCGCCTTCGTGTCTTaGGTTCAGCCAGCTCTAGTT | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWGAFVS*VQPALV Trigger: AACTAGAGCTGGCTGAACTCAAGACACGAAGGCGCC...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTTCCACATCAACGCCTTaGGGATCTCGGTGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPSTSTP*GSRWPI Trigger: GATGGGCCACCGAGATCCTCAAGGCGTTGATGTGGA...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACATTTGGGCTCCCACGATaGGCTGAGCACTCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTFGLPR*AEHSTA Trigger: GGCAGTGGAGTGCTCAGCTCATCGTGGGAGCCCAAA...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTCACCTCCCCAAACACTaGAAACTCTCTGACGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPHLPKH*KLSDAP Trigger: GGGCGCGTCAGAGAGTTTCCAGTGTTTGGGGAGGTG...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTACACTGGAAACTCTCTaGCGCGCCCTTCCGACTGTA | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPTLETL*RALPTV Trigger: TACAGTCGGAAGGGCGCGTCAGAGAGTTTCCAGTGT...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACATCCACATCAACGCCTTaGGGATCTCGGTGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTSTSTP*GSRWPI Trigger: GATGGGCCACCGAGATCCTCAAGGCGTTGATGTGGA...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTACACGCCTCCTTGTCTaGCATGCCTCAGCACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPTRLLV*HASAQK Trigger: CTTCTGTGCTGAGGCATGCCAGACAAGGAGGCGTGT...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGGCGCCTTCGTGTCTTaGGTTCAGCCAGCTCTAGTT | + |
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Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTGAFVS*VQPALV Trigger: AACTAGAGCTGGCTGAACTCAAGACACGAAGGCGCC...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR GCA 90 bp | CATCTCTCCACATTCTTGATCTTTGGCCCTGGGATGGAATGTTATTCAAGATTGGGTCCGGCACTTCCATaGCTCCTCCACATCAACGCC | + |
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Preference number: 4 (lower is better) Translates to: HLSTFLIFGPGMECYSRLGPALP*LLHINA Trigger: GGCGTTGATGTGGAGGAGGCATGGAAGTGCCGGACC...CAATCTTGAATAACATTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAACACGCCTCCTTGTCTaGCATGCCTCAGCACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTTRLLV*HASAQK Trigger: CTTCTGTGCTGAGGCATGCCAGACAAGGAGGCGTGT...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAATCTCTCCATGGGTaGCAAGACATCCAATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTESLHG*QDIQSP Trigger: GGGGGATTGGATGTCTTGTCACCCATGGAGAGATTC...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTAACTCACACCAGTTCTaGGTGCACAGGTCAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPNSHQF*VHRSVT Trigger: TGTCACTGACCTGTGCACTCAGAACTGGTGTGAGTT...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGTTCTGCAAGCTTACTaGTTTGTCATCCTTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWVLQAY*FVILPR Trigger: CCTGGGAAGGATGACAAACCAGTAAGCTTGCAGAAC...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGGTGGAATCTCTCCATaGGTGACAAGACATCCAATC | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWGGISP*VTRHPI Trigger: GATTGGATGTCTTGTCACCCATGGAGAGATTCCACC...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAAACTCACACCAGTTCTaGGTGCACAGGTCAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTNSHQF*VHRSVT Trigger: TGTCACTGACCTGTGCACTCAGAACTGGTGTGAGTT...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAAACGATCAACATTCCACATCAACGCCTTaGGGATCTCGGTGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: AERLVLLHGYIKNRNDQHSTSTP*GSRWPI Trigger: GATGGGCCACCGAGATCCTCAAGGCGTTGATGTGGA...ATGTTGATCGTTTCTGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR GCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTCCCCCTTTCCAGTTCTaGAAGCTTACTGGTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPPPFQF*KLTGLS Trigger: TGACAAACCAGTAAGCTTGCAGAACTGGAAAGGGGG...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR GCA 90 bp | ACACTGTCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTACCCCCTTTCCAGTTCTaGAAGCTTACTGGTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLSTRAKLRDWSSYMGILPPFQF*KLTGLS Trigger: TGACAAACCAGTAAGCTTGCAGAACTGGAAAGGGGG...TAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGACAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR GCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGAGTGTCCAAAACAGCTaGTTTCTCAGGTGTCAACGA | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWSVQNS*FLRCQR Trigger: TCGTTGACACCTGAGAAAGCAGCTGTTTTGGACACT...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAGTTCTGCAAGCTTACTaGTTTGTCATCCTTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLSTRAKLRDWSSYMGILVLQAY*FVILPR Trigger: CCTGGGAAGGATGACAAACCAGTAAGCTTGCAGAAC...TAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGACAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGTGGAATCTCTCCATaGGTGACAAGACATCCAATC | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPGGISP*VTRHPI Trigger: GATTGGATGTCTTGTCACCCATGGAGAGATTCCACC...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGAAGCATCTTCTTTTGTaGCGATGGGGACTGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWKHLLL*RWGLSQ Trigger: TTGTGACAGTCCCCATCGCCACAAAAGAAGATGCTT...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGCTCTAGTTCCCCCTTaGATGTGTAGTGCAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPALVPP*MCSATH Trigger: ATGAGTTGCACTACACATCCAAGGGGGAACTAGAGC...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | CATCTCTCCACATTCTTGATCTTTGGCCCTGGGATGGAATGTTATTCAAGATTGGAATCTCTCCATGGGTaGCAAGACATCCAATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: HLSTFLIFGPGMECYSRLESLHG*QDIQSP Trigger: GGGGGATTGGATGTCTTGTCACCCATGGAGAGATTC...CAATCTTGAATAACATTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAAACGATCAACATACACTGGAAACTCTCTaGCGCGCCCTTCCGACTGTA | + |
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Preference number: 4 (lower is better) Translates to: AERLVLLHGYIKNRNDQHTLETL*RALPTV Trigger: TACAGTCGGAAGGGCGCGTCAGAGAGTTTCCAGTGT...ATGTTGATCGTTTCTGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | GAAAGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCAGTTCTTTTGCTAGGTaGATGCTAGCACCAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ESSKVTLTPHLSTFLIFGSSFAR*MLAPVS Trigger: GGACACTGGTGCTAGCATCCACCTAGCAAAAGAACT...GCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTAAGCATCTTCTTTTGTaGCGATGGGGACTGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPKHLLL*RWGLSQ Trigger: TTGTGACAGTCCCCATCGCCACAAAAGAAGATGCTT...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | GAAAGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCGCTCTAGTTCCCCCTTaGATGTGTAGTGCAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: ESSKVTLTPHLSTFLIFGALVPP*MCSATH Trigger: ATGAGTTGCACTACACATCCAAGGGGGAACTAGAGC...GCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | AAAACACTGTCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATACACAATTTAGTGTGGTaGATTAGGCTAGCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: KTLSTRAKLRDWSSYMGIHNLVW*IRLAGV Trigger: GACTCCTGCTAGCCTAATCCACCACACTAAATTGTG...TATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGACAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR TCA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGACTGTCACAAGGTCATaGAGTTCTAGTTCTTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LQGHSNTTSLHILDLWPWTVTRS*SSSSFA Trigger: AGCAAAAGAACTAGAACTTCATGACCTTGTGACAGT...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR GCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAAGTGTCCAAAACAGCTaGTTTCTCAGGTGTCAACGA | + |
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Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTSVQNS*FLRCQR Trigger: TCGTTGACACCTGAGAAAGCAGCTGTTTTGGACACT...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTTCACACAATTTAGTGTGGTaGATTAGGCTAGCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SKVTLTPHLSTFLIFGPSHNLVW*IRLAGV Trigger: GACTCCTGCTAGCCTAATCCACCACACTAAATTGTG...TGAAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144114.2 |
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| CDS-3UTR CCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTAGACACAATTTAGTGTaGTGGATTAGGCTAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPRHNLV*WIRLAG Trigger: TCCTGCTAGCCTAATCCACCACACTAAATTGTGTCT...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | CATCTCTCCACATTCTTGATCTTTGGCCCTGGGATGGAATGTTATTCAAGATTGAGTTCTTTTGCTAGGTaGATGCTAGCACCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLSTFLIFGPGMECYSRLSSFAR*MLAPVS Trigger: GGACACTGGTGCTAGCATCCACCTAGCAAAAGAACT...CAATCTTGAATAACATTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
||
| CDS-3UTR CCA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAAGACACAATTTAGTGTaGTGGATTAGGCTAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STRAKLRDWSSYMGILRTRHNLV*WIRLAG Trigger: TCCTGCTAGCCTAATCCACCACACTAAATTGTGTCT...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTATAGTGGCAGTCTCTTaGTGGATATACTCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPIVAVS*WIYSSF Trigger: AAAACTTGAGTATATCCATCAAGAGACTGCCACTAT...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS-3UTR TCA 90 bp | GTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGATGGAAATAGTGGCAGTCTCTTaGTGGATATACTCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTLTPHLSTFLIFGPGMEIVAVS*WIYSSF Trigger: AAAACTTGAGTATATCCATCAAGAGACTGCCACTAT...TTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CCA 90 bp | GTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGATGGAATATAAATATTTCAGGTaGAATCTCTCCATGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTLTPHLSTFLIFGPGMEYKYFR*NLSMGD Trigger: GTCACCCATGGAGAGATTCCACCTGAAATATTTATA...TTCCATCCCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGTCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTACTTTCCCTTGTACCATaGCATCAAAGATATATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSTRAKLRDWSSYMGILLSLVP*HQRYIC Trigger: ACAAATATATCTTTGATGCCATGGTACAAGGGAAAG...TAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGACAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTCTTTCCCTTGTACCATaGCATCAAAGATATATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPLSLVP*HQRYIC Trigger: ACAAATATATCTTTGATGCCATGGTACAAGGGAAAG...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAAACGATCAACATCACAATTTAGTGTGGTaGATTAGGCTAGCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AERLVLLHGYIKNRNDQHHNLVW*IRLAGV Trigger: GACTCCTGCTAGCCTAATCCACCACACTAAATTGTG...ATGTTGATCGTTTCTGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCTTTCCCTTGTACCATaGCATCAAAGATATATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSKVTLTPHLSTFLIFGLSLVP*HQRYIC Trigger: ACAAATATATCTTTGATGCCATGGTACAAGGGAAAG...GCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAAACGATCAACATAGACACAATTTAGTGTaGTGGATTAGGCTAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AERLVLLHGYIKNRNDQHRHNLV*WIRLAG Trigger: TCCTGCTAGCCTAATCCACCACACTAAATTGTGTCT...ATGTTGATCGTTTCTGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
||
| CDS GCA 90 bp | CCTCCACTCGCAGATGTCCACATAGTCACAGGTCCGGCACTTCCATaGCTCCTCCACATCAACGCCTTGAGGATCTCGGTGGCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPLADVHIVTGPALP*LLHINALRISVAHP Trigger: TGGATGGGCCACCGAGATCCTCAAGGCGTTGATGTGGAGGAGGCATGGAAGTGCCGGACCTGTGACTATGTGGACATCTGCGAGTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS GCA 90 bp | GAGGATCTCGGTGGCCCATCCAGTAGGCCACGTAATGCTGCACCTTaGTTTTCACTTCCTTCTCTTCAAAGGCTACAATCTCTGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EDLGGPSSRPRNAAP*FSLPSLQRLQSLCP Trigger: TGGGCACAGAGATTGTAGCCTTTGAAGAGAAGGAAGTGAAAAGCAAGGTGCAGCATTACGTGGCCTACTGGATGGGCCACCGAGATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTCTCCACATCAACGCCTaGAGGATCTCGGTGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPLHINA*RISVAH Trigger: ATGGGCCACCGAGATCCTCAAGGCGTTGATGTGGAG...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS-3UTR CAA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACACTCCACATCAACGCCTaGAGGATCTCGGTGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: STRAKLRDWSSYMGILRTLHINA*RISVAH Trigger: ATGGGCCACCGAGATCCTCAAGGCGTTGATGTGGAG...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS TCA 90 bp | GTCATCCTTCCCAGGGAGTTCAGCAGAAGGGCCAGGCTTGCTAAGTaGAACAGCCGATTCTTTGGCTTCTTCCAGATCCAGAAATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VILPREFSRRARLAK*NSRFFGFFQIQKFN Trigger: GTTGAATTTCTGGATCTGGAAGAAGCCAAAGAATCGGCTGTTTCACTTAGCAAGCCTGGCCCTTCTGCTGAACTCCCTGGGAAGGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
||
| CDS CCA 90 bp | CTCAGCACAGAAGGTCCCAGTGGCTTGTCTAGACACAATTTAGTGTaGTGGATTAGGCTAGCAGGAGTCACTTTCCCTTGTACCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTEGPSGLSRHNLV*WIRLAGVTFPCTMA Trigger: TGCCATGGTACAAGGGAAAGTGACTCCTGCTAGCCTAATCCACCACACTAAATTGTGTCTAGACAAGCCACTGGGACCTTCTGTGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATACCCAAGCATCTTCTTTaGTGGCGATGGGGACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTLSTRAKLRDWSSYMGIPKHLL*WRWGLS Trigger: TGACAGTCCCCATCGCCACAAAAGAAGATGCTTGGG...TATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGACAGTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS GCA 90 bp | AATCTCTCCATGGGTGACAAGACATCCAATCCCCCTTTCCAGTTCTaGAAGCTTACTGGTTTGTCATCCTTCCCAGGGAGTTCAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLSMGDKTSNPPFQF*KLTGLSSFPGSSAE Trigger: TTCTGCTGAACTCCCTGGGAAGGATGACAAACCAGTAAGCTTGCAGAACTGGAAAGGGGGATTGGATGTCTTGTCACCCATGGAGAGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
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| CDS CCA 90 bp | AGCACAGAAGGTCCCAGTGGCTTGTCTAGACACAATTTAGTGTGGTaGATTAGGCTAGCAGGAGTCACTTTCCCTTGTACCATGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: STEGPSGLSRHNLVW*IRLAGVTFPCTMAS Trigger: TGATGCCATGGTACAAGGGAAAGTGACTCCTGCTAGCCTAATCCACCACACTAAATTGTGTCTAGACAAGCCACTGGGACCTTCTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGAAACAGCCGATTCTTaGGCTTCTTCCAGATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQGHSNTTSLHILDLWPWETADS*ASSRSR Trigger: TCTGGATCTGGAAGAAGCCAAAGAATCGGCTGTTTC...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTTGCAAGCTTACTGGTTaGTCATCCTTCCCAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPCKLTG*SSFPGS Trigger: ACTCCCTGGGAAGGATGACAAACCAGTAAGCTTGCA...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACATGCAAGCTTACTGGTTaGTCATCCTTCCCAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STRAKLRDWSSYMGILRTCKLTG*SSFPGS Trigger: ACTCCCTGGGAAGGATGACAAACCAGTAAGCTTGCA...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGAAGGTCCCAGTGGCTaGTCTAGACACAATTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSKVTLTPHLSTFLIFGPEGPSG*SRHNLV Trigger: CACTAAATTGTGTCTAGACAAGCCACTGGGACCTTC...AGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAAACGATCAACATCTCCACATCAACGCCTaGAGGATCTCGGTGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AERLVLLHGYIKNRNDQHLHINA*RISVAH Trigger: ATGGGCCACCGAGATCCTCAAGGCGTTGATGTGGAG...ATGTTGATCGTTTCTGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAAACAGCCGATTCTTaGGCTTCTTCCAGATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STRAKLRDWSSYMGILRTETADS*ASSRSR Trigger: TCTGGATCTGGAAGAAGCCAAAGAATCGGCTGTTTC...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGGTAGGGCAGGAATCATaGCTAGTATGTTCAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LQGHSNTTSLHILDLWPWVGQES*LVCSET Trigger: AGTTTCTGAACATACTAGCAATGATTCCTGCCCTAC...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | TCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAAGAACAGAAGGTCCCAGTGGCTaGTCTAGACACAATTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: STRAKLRDWSSYMGILRTEGPSG*SRHNLV Trigger: CACTAAATTGTGTCTAGACAAGCCACTGGGACCTTC...TGTTCTTAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | GAAAGCTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCGAAGGTCCCAGTGGCTaGTCTAGACACAATTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ESSKVTLTPHLSTFLIFGEGPSG*SRHNLV Trigger: CACTAAATTGTGTCTAGACAAGCCACTGGGACCTTC...GCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | ACACTGTCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATTAGTAGGGCAGGAATCATaGCTAGTATGTTCAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: TLSTRAKLRDWSSYMGILVGQES*LVCSET Trigger: AGTTTCTGAACATACTAGCAATGATTCCTGCCCTAC...TAATATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGACAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | CTCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTGGTATAGTGGCAGTCTCTaGATGGATATACTCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQGHSNTTSLHILDLWPWYSGSL*MDILKF Trigger: AAACTTGAGTATATCCATCAAGAGACTGCCACTATA...CCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | AAAACACTGTCCACGAGAGCCAAGCTGAGAGACTGGTCCTCTTACATGGGTATATATAGTGGCAGTCTCTaGATGGATATACTCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTLSTRAKLRDWSSYMGIYSGSL*MDILKF Trigger: AAACTTGAGTATATCCATCAAGAGACTGCCACTATA...TATACCCATGTAAGAGGACCAGTCTCTCAGCTTGGCTCTCGTGGACAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS TCA 90 bp | TCTTCAAAGGCTACAATCTCTGTGCCCAGTATAGTGGCAGTCTCTTaGTGGATATACTCAAGTTTTAGGGTATCAATAGCTGGGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKATISVPSIVAVS*WIYSSFRVSIAGRS Trigger: TGATCTCCCAGCTATTGATACCCTAAAACTTGAGTATATCCATCAAGAGACTGCCACTATACTGGGCACAGAGATTGTAGCCTTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS-3UTR CAA 90 bp | TCCAAGGTCACTCTAACACCACATCTCTCCACATTCTTGATCTTTGGCCCTTCATATAGTGGCAGTCTCTaGATGGATATACTCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKVTLTPHLSTFLIFGPSYSGSL*MDILKF Trigger: AAACTTGAGTATATCCATCAAGAGACTGCCACTATA...TGAAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144114.2 |
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| CDS GCA 72 bp | GCAGATGTCCACATAGTCACAGGTCCGGCACTTCCATaGCTCCTCCACATCAACGCCTTGAGGATCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ADVHIVTGPALP*LLHINALRISV Trigger: CACCGAGATCCTCAAGGCGTTGATGTGGAGGAGGCATGGAAGTGCCGGACCTGTGACTATGTGGACATCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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| CDS TCA 72 bp | ATATTCCCTCCACCTCCCCAAACACTGGAAACTCTCTaGCGCGCCCTTCCGACTGTAGGGCAGGAATCATTG | + |
|
Preference number: 6 (lower is better) Translates to: IFPPPPQTLETL*RALPTVGQESL Trigger: CAATGATTCCTGCCCTACAGTCGGAAGGGCGCGTCAGAGAGTTTCCAGTGTTTGGGGAGGTGGAGGGAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030375.9 ENSMUST00000177880.2 |
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| CDS CAA 90 bp | ACGCCTCCTTGTCTGGCATGCCTCAGCACAGAAGGTCCCAGTGGCTaGTCTAGACACAATTTAGTGTGGTGGATTAGGCTAGCAGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TPPCLACLSTEGPSG*SRHNLVWWIRLAGV Trigger: GACTCCTGCTAGCCTAATCCACCACACTAAATTGTGTCTAGACAAGCCACTGGGACCTTCTGTGCTGAGGCATGCCAGACAAGGAGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS CAA 72 bp | TCATCCTTCCCAGGGAGTTCAGCAGAAGGGCCAGGCTaGCTAAGTGAAACAGCCGATTCTTTGGCTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFPGSSAEGPG*LSETADSLASS Trigger: GGAAGAAGCCAAAGAATCGGCTGTTTCACTTAGCAAGCCTGGCCCTTCTGCTGAACTCCCTGGGAAGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
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| CDS CAA 90 bp | GACAAGACATCCAATCCCCCTTTCCAGTTCTGCAAGCTTACTGGTTaGTCATCCTTCCCAGGGAGTTCAGCAGAAGGGCCAGGCTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DKTSNPPFQFCKLTG*SSFPGSSAEGPGLL Trigger: TAGCAAGCCTGGCCCTTCTGCTGAACTCCCTGGGAAGGATGACAAACCAGTAAGCTTGCAGAACTGGAAAGGGGGATTGGATGTCTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
||
| CDS CAA 90 bp | ACTGGTTTGTCATCCTTCCCAGGGAGTTCAGCAGAAGGGCCAGGCTaGCTAAGTGAAACAGCCGATTCTTTGGCTTCTTCCAGATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TGLSSFPGSSAEGPG*LSETADSLASSRSR Trigger: TCTGGATCTGGAAGAAGCCAAAGAATCGGCTGTTTCACTTAGCAAGCCTGGCCCTTCTGCTGAACTCCCTGGGAAGGATGACAAACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
||
| CDS GCA 72 bp | ATGGGTGACAAGACATCCAATCCCCCTTTCCAGTTCTaGAAGCTTACTGGTTTGTCATCCTTCCCAGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: MGDKTSNPPFQF*KLTGLSSFPGS Trigger: ACTCCCTGGGAAGGATGACAAACCAGTAAGCTTGCAGAACTGGAAAGGGGGATTGGATGTCTTGTCACCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
||
| CDS CCA 72 bp | GGTCCCAGTGGCTTGTCTAGACACAATTTAGTGTGGTaGATTAGGCTAGCAGGAGTCACTTTCCCTTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: GPSGLSRHNLVW*IRLAGVTFPCT Trigger: GGTACAAGGGAAAGTGACTCCTGCTAGCCTAATCCACCACACTAAATTGTGTCTAGACAAGCCACTGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS CAA 72 bp | TGTCTGGCATGCCTCAGCACAGAAGGTCCCAGTGGCTaGTCTAGACACAATTTAGTGTGGTGGATTAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: CLACLSTEGPSG*SRHNLVWWIRL Trigger: TAGCCTAATCCACCACACTAAATTGTGTCTAGACAAGCCACTGGGACCTTCTGTGCTGAGGCATGCCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS CCA 72 bp | GAAGGTCCCAGTGGCTTGTCTAGACACAATTTAGTGTaGTGGATTAGGCTAGCAGGAGTCACTTTCCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: EGPSGLSRHNLV*WIRLAGVTFPC Trigger: ACAAGGGAAAGTGACTCCTGCTAGCCTAATCCACCACACTAAATTGTGTCTAGACAAGCCACTGGGACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
||
| CDS CAA 90 bp | AGTTCAGCAGAAGGGCCAGGCTTGCTAAGTGAAACAGCCGATTCTTaGGCTTCTTCCAGATCCAGAAATTCAACTAACTCTGAGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SSAEGPGLLSETADS*ASSRSRNSTNSESL Trigger: GAGTGACTCAGAGTTAGTTGAATTTCTGGATCTGGAAGAAGCCAAAGAATCGGCTGTTTCACTTAGCAAGCCTGGCCCTTCTGCTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
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| CDS CAA 72 bp | GAAGGGCCAGGCTTGCTAAGTGAAACAGCCGATTCTTaGGCTTCTTCCAGATCCAGAAATTCAACTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: EGPGLLSETADS*ASSRSRNSTNS Trigger: AGAGTTAGTTGAATTTCTGGATCTGGAAGAAGCCAAAGAATCGGCTGTTTCACTTAGCAAGCCTGGCCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000156836.2 ENSMUST00000177880.2 |
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| CDS TCA 72 bp | GCTACAATCTCTGTGCCCAGTATAGTGGCAGTCTCTTaGTGGATATACTCAAGTTTTAGGGTATCAATAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATISVPSIVAVS*WIYSSFRVSIA Trigger: AGCTATTGATACCCTAAAACTTGAGTATATCCATCAAGAGACTGCCACTATACTGGGCACAGAGATTGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030375.9 ENSMUST00000144114.2 ENSMUST00000177880.2 |
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