Pregenerated sensors for EXD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032705Ensembl transcript IDs: ENSMUST00000038185.10, ENSMUST00000219039.2, ENSMUST00000219272.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTaGGAAAGGGTCAGCGCTTGTCAGCCCAGCCAGCTGAACACCCAT | + |
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Preference number: 1 (lower is better) Translates to: DMQPEERLSHVSKLS*ERVSACQPSQLNTH Trigger: ATGGGTGTTCAGCTGGCTGGGCTGACAAGCGCTGACCCTTTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR GCA 90 bp | ACTCACCAGCTCCAATGCCTTTGTCCAGGTACCACTGAGCTTTCCTaGGGTCACAGGTGCACAAGGGCTGTCCATCAGGAGCTTGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: THQLQCLCPGTTELS*GHRCTRAVHQELGG Trigger: TCCTCCAAGCTCCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTGGACAAAGGCATTGGAGCTGGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR TCA 90 bp | TGGTCCTCAGAAGCAGGACAAGAGACATGCAACCAGAGGAGAGGCTaGGCCATGTGTCAAAGCTCTCCTGGGAAAGGGTCAGCGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: WSSEAGQETCNQRRG*AMCQSSPGKGSALV Trigger: GACAAGCGCTGACCCTTTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR CCA 90 bp | TCAGCCCAGCCAGCTGAACACCCATTTCCAGAAAAGGACTTCCCCTaGGACAGGGAAGAAGCCCATAGCAAGCTGGCCTTTGGTCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: SAQPAEHPFPEKDFP*DREEAHSKLAFGPV Trigger: TACAGGACCAAAGGCCAGCTTGCTATGGGCTTCTTCCCTGTCCCAGGGGAAGTCCTTTTCTGGAAATGGGTGTTCAGCTGGCTGGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR CCA 90 bp | TTCTGGCAGAATAGCCCACCCCCAGGGGCTTCCTCTTATGCTTCCTaGGGTCTCTCCCTTGGTTGTTGCCTGGCACCATTCTATCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: FWQNSPPPGASSYAS*GLSLGCCLAPFYQS Trigger: AGACTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGAAGCCCCTGGGGGTGGGCTATTCTGCCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR TCA 90 bp | AAGGTTCTTTACTCACCAGCTCCAATGCCTTTGTCCAGGTACCACTaGGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGTCCATCAGGA | + |
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Preference number: 1 (lower is better) Translates to: KVLYSPAPMPLSRYH*AFLRSQVHKGCPSG Trigger: TCCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTGGACAAAGGCATTGGAGCTGGTGAGTAAAGAACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR GCA 90 bp | GGCACCATTCTATCAGTCTTAGCCTTCCTATTTCTCGGCTTCAGCTaGGACTCCAGTGCTTCCCCATTAACCTCTTCAACCAGCCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: GTILSVLAFLFLGFS*DSSASPLTSSTSRP Trigger: TGGCCGGCTGGTTGAAGAGGTTAATGGGGAAGCACTGGAGTCGCAGCTGAAGCCGAGAAATAGGAAGGCTAAGACTGATAGAATGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR GCA 90 bp | ATCAGTCTTAGCCTTCCTATTTCTCGGCTTCAGCTGCGACTCCAGTaGTTCCCCATTAACCTCTTCAACCAGCCGGCCAAGTCCTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: ISLSLPISRLQLRLQ*FPINLFNQPAKSFA Trigger: AGCAAAGGACTTGGCCGGCTGGTTGAAGAGGTTAATGGGGAAGCACTGGAGTCGCAGCTGAAGCCGAGAAATAGGAAGGCTAAGACTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CCA 90 bp | GGGCTTCCTCTTATGCTTCCTGGGGTCTCTCCCTTGGTTGTTGCCTaGCACCATTCTATCAGTCTTAGCCTTCCTATTTCTCGGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: GLPLMLPGVSPLVVA*HHSISLSLPISRLQ Trigger: CTGAAGCCGAGAAATAGGAAGGCTAAGACTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR TCA 90 bp | AATCTCCTGGGGACTCAGGTCTTCCTGCAGGTTCAAACTGTAGCCTaGCCACAAAAGGTTCTTTACTCACCAGCTCCAATGCCTTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: NLLGTQVFLQVQTVA*PQKVLYSPAPMPLS Trigger: GGACAAAGGCATTGGAGCTGGTGAGTAAAGAACCTTTTGTGGTCAGGCTACAGTTTGAACCTGCAGGAAGACCTGAGTCCCCAGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CCA 90 bp | ATCCAAGAAGATGGAGAAAGAGAGCCACTGAAATCTGCGCATCCCTaGCAGCATAAGTTACCAACTGTGTTCTGCACAACAGGGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: IQEDGEREPLKSAHP*QHKLPTVFCTTGPR Trigger: TCTTGGCCCTGTTGTGCAGAACACAGTTGGTAACTTATGCTGCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTCCATCTTCTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR GCA 90 bp | CTGAAATCTGCGCATCCCTGGCAGCATAAGTTACCAACTGTGTTCTaGACAACAGGGCCAAGAAACTACCTCTTCCAGCATCAAAATAGT | + |
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Preference number: 1 (lower is better) Translates to: LKSAHPWQHKLPTVF*TTGPRNYLFQHQNS Trigger: ACTATTTTGATGCTGGAAGAGGTAGTTTCTTGGCCCTGTTGTGCAGAACACAGTTGGTAACTTATGCTGCCAGGGATGCGCAGATTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CCA 90 bp | ACTCTTGGGTCACTTCTTCAACTCTGGAAAAAGTTCTCCCTGGCCTaGAAAAACCAATGCAGCAGAGAGAATTACAAACGTCTTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TLGSLLQLWKKFSLA*KNQCSRENYKRLPR Trigger: CCTGGGAAGACGTTTGTAATTCTCTCTGCTGCATTGGTTTTTCCAGGCCAGGGAGAACTTTTTCCAGAGTTGAAGAAGTGACCCAAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR CCA 90 bp | ACTAAGGAGAGGTTAGTATTGCATGAACATGAACACCAAAGGAAGTaGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAG | + |
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Preference number: 1 (lower is better) Translates to: TKERLVLHEHEHQRK*AQTLRNHGPQKQDK Trigger: CTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATACTAACCTCTCCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR TCA 90 bp | ATCTCTAGAGAAAGGGTATCCAAGAAGATGGAGAAAGAGAGCCACTaGAATCTGCGCATCCCTGGCAGCATAAGTTACCAACTGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: ISRERVSKKMEKESH*NLRIPGSISYQLCS Trigger: AGAACACAGTTGGTAACTTATGCTGCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTCCATCTTCTTGGATACCCTTTCTCTAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR TCA 90 bp | CTCGGCTTCAGCTGCGACTCCAGTGCTTCCCCATTAACCTCTTCAACCAGCCGGGGAGAGATGGCTCAGTaGTTTAAGAGCACTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LGFSCDSSASPLTSSTSRGEMAQ*FKSTGC Trigger: GCAGCCAGTGCTCTTAAATCACTGAGCCATCTCTCC...CCGGCTGGTTGAAGAGGTTAATGGGGAAGCACTGGAGTCGCAGCTGAAGCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTACCACTGAGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGTCCATCAGGTCCTCTTATGCTTCCTaGGGTCTCTCCCTTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: QVPLSFPAVTGAQGLSIRSSYAS*GLSLGC Trigger: ACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGA...CCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CAA 90 bp | CCCAGGGGCTTCCTCTTATGCTTCCTGGGGTCTCTCCCTTGGTTGTaGCCTGGCACCATTCTATCAGTCTTAGCCTTCCTATTTCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: PRGFLLCFLGSLPWL*PGTILSVLAFLFLG Trigger: GCCGAGAAATAGGAAGGCTAAGACTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGAAGCCCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAACGTCTTCCCAGGGCCTaGCAAGTTACTTCAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RDMQPEERLSHVSKLSWERLPRA*QVTSEK Trigger: CTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGACG...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGCTTCCTCTTATGCTTCCTGGGGTCTCTCCCTTGGTTGTTGCCTGGCATTTAAGAGCACTGGCTaGTCTTCCAAAGGATCCAAG | + |
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Preference number: 2 (lower is better) Translates to: PGASSYASWGLSLGCCLAFKSTG*SSKGSK Trigger: CTTGGATCCTTTGGAAGAGCAGCCAGTGCTCTTAAA...TGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGAAGCCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTACCACTGAGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGTCCATCAGTTACCAACTGTGTTCTaGACAACAGGGCCAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PGTTELSCGHRCTRAVHQLPTVF*TTGPRN Trigger: GTTTCTTGGCCCTGTTGTGCAGAACACAGTTGGTAA...CTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACTGAGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGTCCATCAGGAGCTTCCCTTGGTTGTTGCCTaGCACCATTCTATCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: TTELSCGHRCTRAVHQELPLVVA*HHSISL Trigger: AAGACTGATAGAATGGTGCCAGGCAACAACCAAGGG...AAGCTCCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CAA 90 bp | AGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGTCCATCAGGAGCTaGGAGGAAGCAGTTATCATAGAGAGGGGATTTTCTGGCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SFPAVTGAQGLSIRS*EEAVIIERGFSGRI Trigger: TATTCTGCCAGAAAATCCCCTCTCTATGATAACTGCTTCCTCCAAGCTCCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATCAGGAGCTTGGAGGAAGCAGTTATCATAGAGAGGGGATTTTCTGGCAGAGAGAAAGAGAGCCACTaGAATCTGCGCATCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SIRSLEEAVIIERGFSGREKESH*NLRIPG Trigger: GCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTC...TCTGCCAGAAAATCCCCTCTCTATGATAACTGCTTCCTCCAAGCTCCTGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGACATGCAACCCTGGGAATAGGAAAGTaGCTCTTGGGTCACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AQTLRNHGPQKQDKRHATLGIGK*LLGHFF Trigger: GAAGAAGTGACCCAAGAGTCACTTTCCTATTCCCAG...GGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAATTCAAACAACAGCCTTaGTCCATCAGAAGTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: RDMQPEERLSHVSKLSWEFKQQP*SIRSTR Trigger: CCTGGTACTTCTGATGGAGCAAGGCTGTTGTTTGAA...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR CCA 90 bp | CGCATCCCTGGCAGCATAAGTTACCAACTGTGTTCTGCACAACAGGGCCAAGAACAGGGGTTGGAGAGATaGCTCAGTGATTTAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RIPGSISYQLCSAQQGQEQGLER*LSDLRA Trigger: TGCTCTTAAATCACTGAGCCATCTCTCCAACCCCTG...TTCTTGGCCCTGTTGTGCAGAACACAGTTGGTAACTTATGCTGCCAGGGATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGACATGCAACCGGAAAAAGTTCTCCCTaGCCTGGAAAAACCAATGCA | + |
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Preference number: 2 (lower is better) Translates to: AQTLRNHGPQKQDKRHATGKSSP*PGKTNA Trigger: TGCATTGGTTTTTCCAGGCCAGGGAGAACTTTTTCC...GGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAATGGTCCTGTATGCATTaGATGAGAACATTTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: RDMQPEERLSHVSKLSWEWSCMH*MRTFSS Trigger: GCTTGAAAATGTTCTCATTCAATGCATACAGGACCA...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGGAAGCAGTTATCATAGAGAGGGGATTTTCTGGCAGAATAGCCCACCCCAGGCTTTTTGCCAGTTaGTTTGGTCCGTACTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LEEAVIIERGFSGRIAHPRLFAS*FGPYFP Trigger: AGGAAAGTACGGACCAAATCAACTGGCAAAAAGCCT...GGGGTGGGCTATTCTGCCAGAAAATCCCCTCTCTATGATAACTGCTTCCTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGGAAGCAGTTATCATAGAGAGGGGATTTTCTGGCAGAATAGCCCACCCCCTCTCCAAGGCTTTTTaGCAGTTGATTTGGTCCGTA | + |
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Preference number: 2 (lower is better) Translates to: LEEAVIIERGFSGRIAHPLSKAF*QLIWSV Trigger: TACGGACCAAATCAACTGGCAAAAAGCCTTGGAGAG...GGGGTGGGCTATTCTGCCAGAAAATCCCCTCTCTATGATAACTGCTTCCTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGGGGTCTCTCCCTTGGTTGTTGCCTGGCACCATTCTATCAGTCTTAGCCTGTCTACCATATTCCTaGATCTCTCCAAGGCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: FLGSLPWLLPGTILSVLACLPYS*ISPRLF Trigger: AAAAAGCCTTGGAGAGATGCAGGAATATGGTAGACA...GGCTAAGACTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CAA 90 bp | AGGACTTCCCCTGGGACAGGGAAGAAGCCCATAGCAAGCTGGCCTTaGGTCCTGTATGCATTGAATGAGAACATTTTCAAGCATGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RTSPGTGKKPIASWP*VLYALNENIFKHVK Trigger: TTTTACATGCTTGAAAATGTTCTCATTCAATGCATACAGGACCAAAGGCCAGCTTGCTATGGGCTTCTTCCCTGTCCCAGGGGAAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR CAA 90 bp | CCAAATGGCTCTGGGAGTGAATTAAGGACTAAGGAGAGGTTAGTATaGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: PNGSGSELRTKERLV*HEHEHQRKWAQTLR Trigger: TCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATACTAACCTCTCCTTAGTCCTTAATTCACTCCCAGAGCCATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAAGTAATACAGTTGGAATaGGCCCCAAACAAATACATA | + |
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Preference number: 2 (lower is better) Translates to: RDMQPEERLSHVSKLSWEVIQLE*APNKYI Trigger: TATGTATTTGTTTGGGGCCCATTCCAACTGTATTAC...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR GCA 90 bp | ATAAATCCAAGTAATACAGTTGGAATGGGCCCCAAACAAATACATATGGGAGAGTTTGACCTTGGCTCCTaGTTCCTGCCTGTCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: INPSNTVGMGPKQIHMGEFDLGS*FLPVLT Trigger: GGTCAGGACAGGCAGGAAGCAGGAGCCAAGGTCAAA...CTCTCCCATATGTATTTGTTTGGGGCCCATTCCAACTGTATTACTTGGATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR CCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATTCACTTCTTCAACTCTaGAAAAAGTTCTCCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHSLLQL*KKFSLA Trigger: GGCCAGGGAGAACTTTTTCCAGAGTTGAAGAAGTGA...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR-3UTR CCA 90 bp | TCCATCAGGAGCTTGGAGGAAGCAGTTATCATAGAGAGGGGATTTTCTGGCAGATTTTGCCAGTTGATTTaGTCCGTACTTTCCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SIRSLEEAVIIERGFSGRFCQLI*SVLSSS Trigger: TGAAGAGGAAAGTACGGACCAAATCAACTGGCAAAA...TCTGCCAGAAAATCCCCTCTCTATGATAACTGCTTCCTCCAAGCTCCTGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CAA 90 bp | GTCTACCATATTCCTGCATCTCTCCAAGGCTTTTTGCCAGTTGATTaGGTCCGTACTTTCCTCTTCATAGGAATCTCTAGAGAAAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: VYHIPASLQGFLPVD*VRTFLFIGISRERV Trigger: TACCCTTTCTCTAGAGATTCCTATGAAGAGGAAAGTACGGACCAAATCAACTGGCAAAAAGCCTTGGAGAGATGCAGGAATATGGTAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR CCA 72 bp | CCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTaGGAAAGGGTCAGCGCTTGTCAGCCCAGCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PEERLSHVSKLS*ERVSACQPSQL Trigger: CAGCTGGCTGGGCTGACAAGCGCTGACCCTTTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR TCA 72 bp | CCTGGGAAAGGGTCAGCGCTTGTCAGCCCAGCCAGCTaGACACCCATTTCCAGAAAAGGACTTCCCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: PGKGSALVSPAS*TPISRKGLPLG Trigger: TCCCAGGGGAAGTCCTTTTCTGGAAATGGGTGTTCAGCTGGCTGGGCTGACAAGCGCTGACCCTTTCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR CCA 72 bp | AATAGCCCACCCCCAGGGGCTTCCTCTTATGCTTCCTaGGGTCTCTCCCTTGGTTGTTGCCTGGCACCATTC | + |
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Preference number: 3 (lower is better) Translates to: NSPPPGASSYAS*GLSLGCCLAPF Trigger: GAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGAAGCCCCTGGGGGTGGGCTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR TCA 72 bp | TACTCACCAGCTCCAATGCCTTTGTCCAGGTACCACTaGGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: YSPAPMPLSRYH*AFLRSQVHKGC Trigger: ACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTGGACAAAGGCATTGGAGCTGGTGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR GCA 72 bp | AGCCTTCCTATTTCTCGGCTTCAGCTGCGACTCCAGTaGTTCCCCATTAACCTCTTCAACCAGCCGGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SLPISRLQLRLQ*FPINLFNQPAK Trigger: CTTGGCCGGCTGGTTGAAGAGGTTAATGGGGAAGCACTGGAGTCGCAGCTGAAGCCGAGAAATAGGAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| 3UTR TCA 72 bp | GAAGCAGGACAAGAGACATGCAACCAGAGGAGAGGCTaGGCCATGTGTCAAAGCTCTCCTGGGAAAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: EAGQETCNQRRG*AMCQSSPGKGS Trigger: TGACCCTTTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTTGTCCTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR CCA 72 bp | CCAGCTGAACACCCATTTCCAGAAAAGGACTTCCCCTaGGACAGGGAAGAAGCCCATAGCAAGCTGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PAEHPFPEKDFP*DREEAHSKLAF Trigger: AAAGGCCAGCTTGCTATGGGCTTCTTCCCTGTCCCAGGGGAAGTCCTTTTCTGGAAATGGGTGTTCAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| 3UTR CCA 72 bp | AGGGGCTTCCTCTTATGCTTCCTGGGGTCTCTCCCTTaGTTGTTGCCTGGCACCATTCTATCAGTCTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RGFLLCFLGSLP*LLPGTILSVLA Trigger: GGCTAAGACTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGAAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGACATGCAACCGAGGTGATTTTGACCTaGGCTCCTGCTTCCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AQTLRNHGPQKQDKRHATEVILT*APASCL Trigger: CAGGCAGGAAGCAGGAGCCAAGGTCAAAATCACCTC...GGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR GCA 72 bp | GCGCATCCCTGGCAGCATAAGTTACCAACTGTGTTCTaGACAACAGGGCCAAGAAACTACCTCTTCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: AHPWQHKLPTVF*TTGPRNYLFQH Trigger: ATGCTGGAAGAGGTAGTTTCTTGGCCCTGTTGTGCAGAACACAGTTGGTAACTTATGCTGCCAGGGATGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| 3UTR GCA 72 bp | CTATCAGTCTTAGCCTTCCTATTTCTCGGCTTCAGCTaGGACTCCAGTGCTTCCCCATTAACCTCTTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: LSVLAFLFLGFS*DSSASPLTSST Trigger: GGTTGAAGAGGTTAATGGGGAAGCACTGGAGTCGCAGCTGAAGCCGAGAAATAGGAAGGCTAAGACTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| 3UTR CCA 72 bp | ACTTCCCCTGGGACAGGGAAGAAGCCCATAGCAAGCTaGCCTTTGGTCCTGTATGCATTGAATGAGAACATT | + |
|
Preference number: 3 (lower is better) Translates to: TSPGTGKKPIAS*PLVLYALNENI Trigger: AATGTTCTCATTCAATGCATACAGGACCAAAGGCCAGCTTGCTATGGGCTTCTTCCCTGTCCCAGGGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR TCA 72 bp | ATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTaGGAAATCATGGTCCTCAGAAGCAGGACAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MNMNTKGSGRRL*EIMVLRSRTRD Trigger: GTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR CCA 72 bp | GATGGAGAAAGAGAGCCACTGAAATCTGCGCATCCCTaGCAGCATAAGTTACCAACTGTGTTCTGCACAACA | + |
|
Preference number: 3 (lower is better) Translates to: DGEREPLKSAHP*QHKLPTVFCTT Trigger: TGTTGTGCAGAACACAGTTGGTAACTTATGCTGCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| 3UTR CCA 72 bp | CTTATGCTTCCTGGGGTCTCTCCCTTGGTTGTTGCCTaGCACCATTCTATCAGTCTTAGCCTTCCTATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LMLPGVSPLVVA*HHSISLSLPIS Trigger: AGAAATAGGAAGGCTAAGACTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| 3UTR TCA 72 bp | GAAAGGGTATCCAAGAAGATGGAGAAAGAGAGCCACTaGAATCTGCGCATCCCTGGCAGCATAAGTTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: ERVSKKMEKESH*NLRIPGSISYQ Trigger: TTGGTAACTTATGCTGCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTCCATCTTCTTGGATACCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATCTTCAAACAACAGCCTaGCTCCATCAGAAGTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHLQTTA*LHQKYQ Trigger: CTGGTACTTCTGATGGAGCAAGGCTGTTGTTTGAAG...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR CCA 72 bp | AGGTTAGTATTGCATGAACATGAACACCAAAGGAAGTaGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RLVLHEHEHQRK*AQTLRNHGPQK Trigger: CTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATACTAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAAAGGCCAAGCTTCTTTaGCACACAAAAATAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSQGLTSYFREDFSLLGKKAKLL*HTKIGE Trigger: CTCTCCTATTTTTGTGTGCAAAAGAAGCTTGGCCTT...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR-3UTR CAA 90 bp | CAATGTCAGATCAGTTATAAGCAACTTGGGTACAATTCCAAAATAGAACTCTTGAAGGAGAGGTTAGTATaGCATGAACATGAACACCAA | + |
|
Preference number: 3 (lower is better) Translates to: QCQISYKQLGYNSKIELLKERLV*HEHEHQ Trigger: TTGGTGTTCATGTTCATGCAATACTAACCTCTCCTT...CAAGAGTTCTATTTTGGAATTGTACCCAAGTTGCTTATAACTGATCTGACATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQESRKC*RQRLSS Trigger: GCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTC...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGACACTGCTGGGGCAGGTaGTTAGGCTGCATGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGHCWGR*LGCMES Trigger: GGACTCCATGCAGCCTAAGCACCTGCCCCAGCAGTG...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAATCCACTGACCACTGCTaGGGCAGGTGCTTAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDMQPEERLSHVSKLSWESTDHC*GRCLGC Trigger: GCAGCCTAAGCACCTGCCCCAGCAGTGGTCAGTGGA...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | GCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGACATGCAACCCTCCCACCAGGCACTTaGTGCTGTGGCTGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AQTLRNHGPQKQDKRHATLPPGT*CCGCGC Trigger: GCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAG...GGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAGGCAGGTGCTTAGGCTaGATGGAGTCCAGGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGGRCLG*MESRKC Trigger: GCACTTCCTGGACTCCATGCAGCCTAAGCACCTGCC...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAAGGCACTTGCTGCTGTaGCTGTGGATGCTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGRHLLL*LWMLWL Trigger: CAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCT...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGACCTCCTCTGAGCCAATaGGAGCCTGGAACTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGPPLSQ*EPGTPW Trigger: CCAAGGAGTTCCAGGCTCCCATTGGCTCAGAGGAGG...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGATTCCACTCTGCCTCCTaGGATACCGTCACCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGFHSAS*DTVTTS Trigger: AGAGGTGGTGACGGTATCTCAGGAGGCAGAGTGGAA...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGAAAGAGAGCCACTaGAATCTGCGCATCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQEKESH*NLRIPG Trigger: GCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTC...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAGTAGGCTCTCTGCGTTaGGCAGGGCTCTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKVGSLR*AGLWLQ Trigger: CTGGAGCCAGAGCCCTGCTCAACGCAGAGAGCCTAC...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | GCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGACATGCAACCTACCGTCACCACCTCTaGCTGGAGTATCCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQTLRNHGPQKQDKRHATYRHHL*LEYPLL Trigger: GAGGAGAGGATACTCCAGGCAGAGGTGGTGACGGTA...GGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | CTCAAAACCATAAGCTCCCCTTCAAACAACAGCCTTGCTCCATCAGAAGTACCAATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTISSPSNNSLAPSEVPMVVVH*PLLGQV Trigger: CACCTGCCCCAGCAGTGGTCAGTGGACCACAACCAT...TGGTACTTCTGATGGAGCAAGGCTGTTGTTTGAAGGGGAGCTTATGGTTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAATTTCGGAGCAGCTTCTaGTGGTTGTGGTCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQFRSSF*WLWSTD Trigger: GTCAGTGGACCACAACCATCAGAAGCTGCTCCGAAA...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAACAGCTGCGACTCCAGTaGTTCCCCATTAACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQQLRLQ*FPINLF Trigger: GAAGAGGTTAATGGGGAAGCACTGGAGTCGCAGCTG...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAACTCTCCCTTGGTTGTTaGCTGGCACCATTCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDMQPEERLSHVSKLSWELSLGC*LAPFYQ Trigger: CTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAG...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAATGGCATGGCAGGAGGTaGAGAGCAACAGCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQWHGRR*RATAHH Trigger: ATGATGTGCTGTTGCTCTGCACCTCCTGCCATGCCA...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAACCTCCCATGAGGCTCTaGGTGCTCTCAGGGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKPPMRL*VLSGHQ Trigger: TTGGTGCCCTGAGAGCACCCAGAGCCTCATGGGAGG...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGATTTCATTGTATATCCTaGTCTCCAGGCTGGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGFHCIS*SPGWRP Trigger: AGGCCGCCAGCCTGGAGACCAGGATATACAATGAAA...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAATGTTGTAAAACTCCCTaGGTGCGTGCAGCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQCCKTP*VRAAAL Trigger: AAGAGCTGCTGCACGCACTCAGGGAGTTTTACAACA...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATTGCTGTGGCTGTGGATaGTCTGGCTGTGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHCCGCG*SGCGCG Trigger: GCCACAGCCACAGCCAGAGCATCCACAGCCACAGCA...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAATCACCAGCTCTCCAATaGCTTTGTCCAGGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQSPALQ*LCPGTT Trigger: AGTGGTACCTGGACAAAGGCATTGGAGAGCTGGTGA...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATTGGTCCACTGACCACTaGTGGGGCAGGTGCTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHWSTDH*WGRCLG Trigger: GCCTAAGCACCTGCCCCAGCAGTGGTCAGTGGACCA...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAGCACCAAAGGGTAGCTaGTCATCTTCTGGAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKAPKGS*SSSGGG Trigger: GCCCCCTCCAGAAGATGACCAGCTACCCTTTGGTGC...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGACCCTTGGTTGTTGCCTaGCACCATTCTATCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGPLVVA*HHSISL Trigger: AAGACTGATAGAATGGTGCCAGGCAACAACCAAGGG...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAATCCTCTTATGCTTCCTaGGGTCTCTCCCTTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKEVGADSEKSWSSEAGQSSYAS*GLSLGC Trigger: ACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGA...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATTCCTGGTCTCCAGGCTaGCGGCCTCGTGAAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHSWSPG*RPREAS Trigger: AGATGCTTCACGAGGCCGCCAGCCTGGAGACCAGGA...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGACTTGTTGGCATCTTCTaGACATCCCACTCCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGLVGIF*TSHSYF Trigger: AAAGTAGGAGTGGGATGTTCAGAAGATGCCAACAAG...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAAAGGCTTTTTGCCAGTTaGTTTGGTCCGTACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDMQPEERLSHVSKLSWERLFAS*FGPYFP Trigger: AGGAAAGTACGGACCAAATCAACTGGCAAAAAGCCT...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAAGGCTGGCGGCCTCGTaGAGCATCTCCTCTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKRLAAS*SISSVI Trigger: TATTACAGAGGAGATGCTTCACGAGGCCGCCAGCCT...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAAGGGGCTTCCTCTTATaGTTCCTGGGGTCTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKRGFLL*FLGSLP Trigger: AGGGAGAGACCCCAGGAAGCATAAGAGGAAGCCCCT...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGACCTGTAGAAGCTTGTTaGCATCTTCTGAACATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGPVEAC*HLLNIP Trigger: TGGGATGTTCAGAAGATGCCAACAAGCTTCTACAGG...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR CAA 72 bp | TCCCCATTAACCTCTTCAACCAGCCGGCCAAGTCCTTaGCTTCGGAATGGGATGTCTACCATATTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLTSSTSRPSP*LRNGMSTIFLH Trigger: ATGCAGGAATATGGTAGACATCCCATTCCGAAGCAAAGGACTTGGCCGGCTGGTTGAAGAGGTTAATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| 3UTR CAA 72 bp | TTCCTCTTATGCTTCCTGGGGTCTCTCCCTTGGTTGTaGCCTGGCACCATTCTATCAGTCTTAGCCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLCFLGSLPWL*PGTILSVLAFL Trigger: TAGGAAGGCTAAGACTGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAGGAAGCATAAGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
||
| CDS-3UTR TCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATTTGTCCAGGTACCACTaGGCTTTCCTGCGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHLSRYH*AFLRSQ Trigger: CTGTGACCGCAGGAAAGCTCAGTGGTACCTGGACAA...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGATCCTTTGCTTCGGAATaGGATGTCTACCATATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGSFASE*DVYHIP Trigger: AGGAATATGGTAGACATCCCATTCCGAAGCAAAGGA...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR CAA 72 bp | CCTGGGACAGGGAAGAAGCCCATAGCAAGCTGGCCTTaGGTCCTGTATGCATTGAATGAGAACATTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTGKKPIASWP*VLYALNENIFK Trigger: CTTGAAAATGTTCTCATTCAATGCATACAGGACCAAAGGCCAGCTTGCTATGGGCTTCTTCCCTGTCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR GCA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGATGTCTACCATATTCCTaGATCTCTCCAAGGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRHATRGEAEPCVKALLGCLPYS*ISPRLF Trigger: AAAAAGCCTTGGAGAGATGCAGGAATATGGTAGACA...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGAGCCTGGAACTCCTTaGCCAGCTGTTGCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHEPGTP*PAVASD Trigger: ATCTGAAGCAACAGCTGGCCAAGGAGTTCCAGGCTC...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR TCA 90 bp | ATAAATCCAAGTAATACAGTTGGAATGGGCCCCAAACAAATACATATGGGAGAGTATCCTCTCCTCCCATaGGGCTCTGGGTGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: INPSNTVGMGPKQIHMGEYPLLP*GSGCSQ Trigger: CTGAGAGCACCCAGAGCCTCATGGGAGGAGAGGATA...CTCTCCCATATGTATTTGTTTGGGGCCCATTCCAACTGTATTACTTGGATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR GCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAATCCATCTACGCTGGATaGCTTTCCACAGGACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKSIYAG*LSTGQI Trigger: GATTTGTCCTGTGGAAAGGCATCCAGCGTAGATGGA...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR GCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATTCTCAGCATCCCAGTTaGTGCAACGAAGTAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHSQHPS*CNEVEG Trigger: CCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGA...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAACTCTCCAAGGCTTTTTaGCAGTTGATTTGGTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKLSKAF*QLIWSV Trigger: TACGGACCAAATCAACTGGCAAAAAGCCTTGGAGAG...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | ATAAATCCAAGTAATACAGTTGGAATGGGCCCCAAACAAATACATATGGGAGAGCTGGGGTCTCTCCCTTaGTTGTTGCCTGGCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: INPSNTVGMGPKQIHMGELGSLP*LLPGTI Trigger: AATGGTGCCAGGCAACAACCAAGGGAGAGACCCCAG...CTCTCCCATATGTATTTGTTTGGGGCCCATTCCAACTGTATTACTTGGATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATCAAGTAATAATCTCCTaGGGACTCAGGTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHQVIIS*GLRSSC Trigger: GCAGGAAGACCTGAGTCCCCAGGAGATTATTACTTG...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR CAA 72 bp | TCTGGGAGTGAATTAAGGACTAAGGAGAGGTTAGTATaGCATGAACATGAACACCAAAGGAAGTGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSELRTKERLV*HEHEHQRKWAQ Trigger: CTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATACTAACCTCTCCTTAGTCCTTAATTCACTCCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR TCA 90 bp | CTCAAAACCATAAGCTCCCCTTCAAACAACAGCCTTGCTCCATCAGAAGTACCAAATAGTCTCAGCAAGTaGTTTCAGGCTAAGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LKTISSPSNNSLAPSEVPNSLSK*FQAKPI Trigger: AATGGGCTTAGCCTGAAATCACTTGCTGAGACTATT...TGGTACTTCTGATGGAGCAAGGCTGTTGTTTGAAGGGGAGCTTATGGTTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAACAAAGGACTGGCTTTaGCTTCCAAATTCACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKTKDWL*LPNSPI Trigger: AATGGGTGAATTTGGAAGGCAAAGCCAGTCCTTTGT...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAATCTCAATAGGGAAATaGTTGCGGTACTCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKISIGK*LRYSCG Trigger: TCCACATGAGTACCGCAAGCATTTCCCTATTGAGAT...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | ATAAATCCAAGTAATACAGTTGGAATGGGCCCCAAACAAATACATATGGGAGAGCCACACCCAGAAGGGTaGTCACTGTCAAAGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: INPSNTVGMGPKQIHMGEPHPEG*SLSKPL Trigger: TAGTGGCTTTGACAGTGACCACCCTTCTGGGTGTGG...CTCTCCCATATGTATTTGTTTGGGGCCCATTCCAACTGTATTACTTGGATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CCA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGAGTGACAAAGGACTaGCTTTGCCTTCCAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHGVTKD*LCLPNS Trigger: TGAATTTGGAAGGCAAAGCCAGTCCTTTGTCACTCC...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CCA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAAAAGGGACTTGTCAAGTaGGAAGTTCAAAATAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSQGLTSYFREDFSLLGKKGLVK*EVQNSL Trigger: GAGACTATTTTGAACTTCCCACTTGACAAGTCCCTT...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| 3UTR CAA 72 bp | GATGTCTACCATATTCCTGCATCTCTCCAAGGCTTTTaGCCAGTTGATTTGGTCCGTACTTTCCTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: DVYHIPASLQGF*PVDLVRTFLFI Trigger: TATGAAGAGGAAAGTACGGACCAAATCAACTGGCAAAAAGCCTTGGAGAGATGCAGGAATATGGTAGACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| CDS-3UTR GCA 90 bp | CAATGTCAGATCAGTTATAAGCAACTTGGGTACAATTCCAAAATAGAACTCTTGAACTCCCTGAGTGCGTaGAGCAGCTCTTCTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QCQISYKQLGYNSKIELLNSLSA*SSSSFR Trigger: TCGGAAAGAAGAGCTGCTGCACGCACTCAGGGAGTT...CAAGAGTTCTATTTTGGAATTGTACCCAAGTTGCTTATAACTGATCTGACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CCA 90 bp | ATAAATCCAAGTAATACAGTTGGAATGGGCCCCAAACAAATACATATGGGAGAGTTACTCCATCTACGCTaGATGCCTTTCCACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: INPSNTVGMGPKQIHMGELLHLR*MPFHRT Trigger: TGTCCTGTGGAAAGGCATCCAGCGTAGATGGAGTAA...CTCTCCCATATGTATTTGTTTGGGGCCCATTCCAACTGTATTACTTGGATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CCA 90 bp | GATGTCTACCATATTCCTGCATCTCTCCAAGGCTTTTTGCCAGTTGATTTGGTCCATGTCAGCAAAACCTaGTCTTCAGTAAGATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVYHIPASLQGFLPVDLVHVSKT*SSVRFS Trigger: TGAGAATCTTACTGAAGACCAGGTTTTGCTGACATG...GACCAAATCAACTGGCAAAAAGCCTTGGAGAGATGCAGGAATATGGTAGACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219039.2 |
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| CDS-3UTR GCA 90 bp | CAATGTCAGATCAGTTATAAGCAACTTGGGTACAATTCCAAAATAGAACTCTTGCAGCATCCCAGTTGCTaGAACGAAGTAGAAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QCQISYKQLGYNSKIELLQHPSC*NEVEGT Trigger: AGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTG...CAAGAGTTCTATTTTGGAATTGTACCCAAGTTGCTTATAACTGATCTGACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR TCA 90 bp | CAATGTCAGATCAGTTATAAGCAACTTGGGTACAATTCCAAAATAGAACTCTTGGTTCAAACTGTAGCCTaGCCACAAAAGGTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QCQISYKQLGYNSKIELLVQTVA*PQKVLY Trigger: GTAAAGAACCTTTTGTGGTCAGGCTACAGTTTGAAC...CAAGAGTTCTATTTTGGAATTGTACCCAAGTTGCTTATAACTGATCTGACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CCA 90 bp | CAATGTCAGATCAGTTATAAGCAACTTGGGTACAATTCCAAAATAGAACTCTTGTTTTGCCAGTTGATTTaGTCCGTACTTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCQISYKQLGYNSKIELLFCQLI*SVLSSS Trigger: TGAAGAGGAAAGTACGGACCAAATCAACTGGCAAAA...CAAGAGTTCTATTTTGGAATTGTACCCAAGTTGCTTATAACTGATCTGACATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 90 bp | GGGGGCCACTCCCTCCCACCAGGCACTTGCTGCTGTGGCTGTGGATaGTCTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGHSLPPGTCCCGCG*SGCGCGCGCGCGCG Trigger: GCCGCAGCCACAGCCACAGCCACAGCCACAGCCACAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGGGAGTGGCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 90 bp | CACTGCTGGGGCAGGTGCTTAGGCTGCATGGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGCTGCATGAGGGAGCGCAGCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: HCWGRCLGCMESRKC*RQRLSSCMRERSPP Trigger: GGGTGGGCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTCCATGCAGCCTAAGCACCTGCCCCAGCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 90 bp | CCACTCCCTCCCACCAGGCACTTGCTGCTGTGGCTGTGGATGCTCTaGCTGTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGCGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLPPTRHLLLWLWML*LWLWLWLWLWLRLL Trigger: CAGCAGCCGCAGCCACAGCCACAGCCACAGCCACAGCCACAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGGGAGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 90 bp | TGGAGGGGGCCACTCCCTCCCACCAGGCACTTGCTGCTGTGGCTGTaGATGCTCTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WRGPLPPTRHLLLWL*MLWLWLWLWLWLWL Trigger: CAGCCACAGCCACAGCCACAGCCACAGCCACAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGGGAGTGGCCCCCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 90 bp | AGCTGGTCATCTTCTGGAGGGGGCCACTCCCTCCCACCAGGCACTTaGTGCTGTGGCTGTGGATGCTCTGGCTGTGGCTGTGGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SWSSSGGGHSLPPGT*CCGCGCSGCGCGCG Trigger: GCCACAGCCACAGCCACAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGGGAGTGGCCCCCTCCAGAAGATGACCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 90 bp | ATCTTCTGGAGGGGGCCACTCCCTCCCACCAGGCACTTGCTGCTGTaGCTGTGGATGCTCTGGCTGTGGCTGTGGCTGTGGCTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IFWRGPLPPTRHLLL*LWMLWLWLWLWLWL Trigger: CAGCCACAGCCACAGCCACAGCCACAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGGGAGTGGCCCCCTCCAGAAGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 90 bp | GCATGGAGTCCAGGAAGTGCTGACGCCAGCGGCTCTCCAGCTGCATaGGGGAGCGCAGCCCACCCTCGGTGTGACGCTGTACCACCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AWSPGSADASGSPAA*GSAAHPRCDAVPPL Trigger: TAAAGGTGGTACAGCGTCACACCGAGGGTGGGCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTCCATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 90 bp | TGGTCATCTTCTGGAGGGGGCCACTCCCTCCCACCAGGCACTTGCTaGTGTGGCTGTGGATGCTCTGGCTGTGGCTGTGGCTGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WSSSGGGHSLPPGTC*CGCGCSGCGCGCGC Trigger: ACAGCCACAGCCACAGCCACAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGGGAGTGGCCCCCTCCAGAAGATGACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 90 bp | CCGTCACCACCTCTGCCTGGAGTATCCTCTCCTCCCATGAGGCTCTaGGTGCTCTCAGGGCACCAAAGGGTAGCTGGTCATCTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSPPLPGVSSPPMRL*VLSGHQRVAGHLLE Trigger: CTCCAGAAGATGACCAGCTACCCTTTGGTGCCCTGAGAGCACCCAGAGCCTCATGGGAGGAGAGGATACTCCAGGCAGAGGTGGTGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 90 bp | GCTGCTGCGGCTGCTGTGGCTGCTGAGGCTGCTGCTGCATCACTCTaGTTGTCTTACTCCATCTACGCTGGATGCCTTTCCACAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAVAAEAAAASL*LSYSIYAGCLSTGQ Trigger: TTGTCCTGTGGAAAGGCATCCAGCGTAGATGGAGTAAGACAAGCAGAGTGATGCAGCAGCAGCCTCAGCAGCCACAGCAGCCGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 90 bp | TCCGCTCTAAGTCTTCCAGCAGGCGTAGGCCCTCCTCTGAGCCAATaGGAGCCTGGAACTCCTTGGCCAGCTGTTGCTTCAGATGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SALSLPAGVGPPLSQ*EPGTPWPAVASDGC Trigger: ACAACCATCTGAAGCAACAGCTGGCCAAGGAGTTCCAGGCTCCCATTGGCTCAGAGGAGGGCCTACGCCTGCTGGAAGACTTAGAGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGACCTCCCACCAGGCACTaGCTGCTGTGGCTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KRHATRGEAEPCVKALLGPPTRH*LLWLWM Trigger: CATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGG...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAGGTAGGCTCTCTGCGTaGAGCAGGGCTCTGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRHATRGEAEPCVKALLGGRLSA*SRALAP Trigger: TGGAGCCAGAGCCCTGCTCAACGCAGAGAGCCTACC...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 90 bp | TCACCAGCTCTCCAATGCCTTTGTCCAGGTACCACTGAGCTTTCCTaGGGTCACAGGTGCACAAGGGCTGTCCATCAGGAGCTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPALQCLCPGTTELS*GHRCTRAVHQELGG Trigger: TCCTCCAAGCTCCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTGGACAAAGGCATTGGAGAGCTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 90 bp | GGTTCTTTACTCACCAGCTCTCCAATGCCTTTGTCCAGGTACCACTaGGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGTCCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSLLTSSPMPLSRYH*AFLRSQVHKGCPSG Trigger: TCCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTGGACAAAGGCATTGGAGAGCTGGTGAGTAAAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAAAAGAAAGGGCTGGATTaGATTCCACTCTGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDMQPEERLSHVSKLSWEKKGLD*IPLCLL Trigger: CAGGAGGCAGAGTGGAATCAAATCCAGCCCTTTCTT...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAACTCCTTGGCCAGCTGTaGCTTCAGATGGTTGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: RDMQPEERLSHVSKLSWELLGQL*LQMVVI Trigger: TATGACAACCATCTGAAGCAACAGCTGGCCAAGGAG...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CAA 90 bp | AGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGAAGACAAAGGACTGGCTTaGCCTTCCAAATTCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RDMQPEERLSHVSKLSWEDKGLA*PSKFTH Trigger: ATGGGTGAATTTGGAAGGCAAAGCCAGTCCTTTGTC...TTCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CAA 90 bp | GCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGACATGCAACCTCTCTCCCTTGGTTGTaGCCTGGCACCATTCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: AQTLRNHGPQKQDKRHATSLPWL*PGTILS Trigger: TGATAGAATGGTGCCAGGCAACAACCAAGGGAGAGA...GGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CAA 90 bp | GCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAAGAGACATGCAACCTCCTGTAGAAGCTTGTaGGCATCTTCTGAACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQTLRNHGPQKQDKRHATSCRSL*ASSEHP Trigger: GGGATGTTCAGAAGATGCCAACAAGCTTCTACAGGA...GGTTGCATGTCTCTTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CAA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGACGAAGTAGAAGGGACTaGTCAAGTGGGAAGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRHATRGEAEPCVKALLGRSRRD*SSGKFK Trigger: TTTGAACTTCCCACTTGACAAGTCCCTTCTACTTCG...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACCATAAGCTCCCCTTCAAACAACAGCCTTGCTCCATCAGAAGTACCAAGCCGGCCAAGTCCTTaGCTTCGGAATGGGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKTISSPSNNSLAPSEVPSRPSP*LRNGMS Trigger: AGACATCCCATTCCGAAGCAAAGGACTTGGCCGGCT...TGGTACTTCTGATGGAGCAAGGCTGTTGTTTGAAGGGGAGCTTATGGTTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGGTCCTCAGAAGCAGGACAACTGTCCATCAGGAGCTaGGAGGAAGCAGTTATCATA | + |
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Preference number: 5 (lower is better) Translates to: PKEVGADSEKSWSSEAGQLSIRS*EEAVII Trigger: TATGATAACTGCTTCCTCCAAGCTCCTGATGGACAG...TTGTCCTGCTTCTGAGGACCATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 90 bp | AATCTCCTGGGGACTCAGGTCTTCCTGCAGGTTCAAACTGTAGCCTaGCCACAAAAGGTTCTTTACTCACCAGCTCTCCAATGCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: NLLGTQVFLQVQTVA*PQKVLYSPALQCLC Trigger: ACAAAGGCATTGGAGAGCTGGTGAGTAAAGAACCTTTTGTGGTCAGGCTACAGTTTGAACCTGCAGGAAGACCTGAGTCCCCAGGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 90 bp | ATCTTCCAACTCTCTTTTAAGAAAGGGCTGGATTTGATTCCACTCTaGCTCCTGAGATACCGTCACCACCTCTGCCTGGAGTATCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: IFQLSFKKGLDLIPL*LLRYRHHLCLEYPL Trigger: GAGAGGATACTCCAGGCAGAGGTGGTGACGGTATCTCAGGAGGCAGAGTGGAATCAAATCCAGCCCTTTCTTAAAAGAGAGTTGGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | GTATTGCATGAACATGAACACCAAAGGAAGTGGGCGCAGACTCTGAGAAATCATGTGCACAGAAGCCACTaGGGGAAGCCATCTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: VLHEHEHQRKWAQTLRNHVHRSH*GKPSVG Trigger: TCCTACAGATGGCTTCCCCAAGTGGCTTCTGTGCAC...ATGATTTCTCAGAGTCTGCGCCCACTTCCTTTGGTGTTCATGTTCATGCAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | AAGAGACATGCAACCAGAGGAGAGGCTGAGCCATGTGTCAAAGCTCTCCTGGGATCAATAGGGAAATGCTaGCGGTACTCATGTGGAATT | + |
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Preference number: 5 (lower is better) Translates to: KRHATRGEAEPCVKALLGSIGKC*RYSCGI Trigger: AATTCCACATGAGTACCGCAAGCATTTCCCTATTGA...TCCCAGGAGAGCTTTGACACATGGCTCAGCCTCTCCTCTGGTTGCATGTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 90 bp | CACAGAAGCCACTTGGGGAAGCCATCTGTAGGAGTGACAAAGGACTaGCTTTGCCTTCCAAATTCACCCATTCACAGTCAATTCCAAGTA | + |
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Preference number: 5 (lower is better) Translates to: HRSHLGKPSVGVTKD*LCLPNSPIHSQFQV Trigger: TACTTGGAATTGACTGTGAATGGGTGAATTTGGAAGGCAAAGCCAGTCCTTTGTCACTCCTACAGATGGCTTCCCCAAGTGGCTTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | TCTTCCCAGGGCCTGACAAGTTACTTCAGAGAAGACTTCTCCCTCTTAGGAAAATTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SSQGLTSYFREDFSLLGKFSASQ*LQRSRR Trigger: CCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGAA...TTTTCCTAAGAGGGAGAAGTCTTCTCTGAAGTAACTTGTCAGGCCCTGGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 90 bp | ATCTCTAGAGAAAGGGTATCCAAGAAGATGGAGAAAGAGAGCCACTaGAATCTGCGCATCCCTGGCAGCATAAGTTACCTGGTCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: ISRERVSKKMEKESH*NLRIPGSISYLVFS Trigger: ACTGAAGACCAGGTAACTTATGCTGCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTCCATCTTCTTGGATACCCTTTCTCTAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS-3UTR CAA 90 bp | ATAAATCCAAGTAATACAGTTGGAATGGGCCCCAAACAAATACATATGGGAGAGAGCACATCATGGGAGTaGTGGTCCTTCATCTCAATA | + |
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Preference number: 5 (lower is better) Translates to: INPSNTVGMGPKQIHMGESTSWE*WSFISI Trigger: TATTGAGATGAAGGACCACAACTCCCATGATGTGCT...CTCTCCCATATGTATTTGTTTGGGGCCCATTCCAACTGTATTACTTGGATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 72 bp | GGCAGGTGCTTAGGCTGCATGGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGCTGCATGAGGGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GRCLGCMESRKC*RQRLSSCMRER Trigger: GCGCTCCCTCATGCAGCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTCCATGCAGCCTAAGCACCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 72 bp | CCACTCCCTCCCACCAGGCACTTGCTGCTGTGGCTGTaGATGCTCTGGCTGTGGCTGTGGCTGTGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PLPPTRHLLLWL*MLWLWLWLWLW Trigger: CCACAGCCACAGCCACAGCCACAGCCAGAGCATCCACAGCCACAGCAGCAAGTGCCTGGTGGGAGGGAGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 72 bp | GGCTGTGGCTGCGGCTGCTGCGGCTGCTGTGGCTGCTaGGGCTGCTGCTGCATCACTCTGCTTGTCTTACTC | + |
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Preference number: 6 (lower is better) Translates to: GCGCGCCGCCGC*GCCCITLLVLL Trigger: GAGTAAGACAAGCAGAGTGATGCAGCAGCAGCCTCAGCAGCCACAGCAGCCGCAGCAGCCGCAGCCACAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 72 bp | AGTCTTCCAGCAGGCGTAGGCCCTCCTCTGAGCCAATaGGAGCCTGGAACTCCTTGGCCAGCTGTTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLPAGVGPPLSQ*EPGTPWPAVAS Trigger: TGAAGCAACAGCTGGCCAAGGAGTTCCAGGCTCCCATTGGCTCAGAGGAGGGCCTACGCCTGCTGGAAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 72 bp | AACTCCCTGAGTGCGTGCAGCAGCTCTTCTTTCCGATaGGCAGGTAGGCTCTCTGCGTTGAGCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: NSLSACSSSSFR*AGRLSALSRAL Trigger: CAGAGCCCTGCTCAACGCAGAGAGCCTACCTGCTCATCGGAAAGAAGAGCTGCTGCACGCACTCAGGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 72 bp | ATGGGAAGGTCATCCCCGTACTTTCGGAGCAGCTTCTaGTGGTTGTGGTCCACTGACCACTGCTGGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MGRSSPYFRSSF*WLWSTDHCWGR Trigger: CCTGCCCCAGCAGTGGTCAGTGGACCACAACCATCAGAAGCTGCTCCGAAAGTACGGGGATGACCTTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CAA 90 bp | GCTGCGGCTGCTGTGGCTGCTGAGGCTGCTGCTGCATCACTCTGCTaGTCTTACTCCATCTACGCTGGATGCCTTTCCACAGGACAAATC | + |
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Preference number: 6 (lower is better) Translates to: AAAAVAAEAAAASLC*SYSIYAGCLSTGQI Trigger: GATTTGTCCTGTGGAAAGGCATCCAGCGTAGATGGAGTAAGACAAGCAGAGTGATGCAGCAGCAGCCTCAGCAGCCACAGCAGCCGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 72 bp | CTCACCAGCTCTCCAATGCCTTTGTCCAGGTACCACTaGGCTTTCCTGCGGTCACAGGTGCACAAGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LTSSPMPLSRYH*AFLRSQVHKGC Trigger: ACAGCCCTTGTGCACCTGTGACCGCAGGAAAGCTCAGTGGTACCTGGACAAAGGCATTGGAGAGCTGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CAA 72 bp | TCAGCCTGGGCAAGCGAACCAGTGCACAGAAGCCACTaGGGGAAGCCATCTGTAGGAGTGACAAAGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SAWASEPVHRSH*GKPSVGVTKDW Trigger: CCAGTCCTTTGTCACTCCTACAGATGGCTTCCCCAAGTGGCTTCTGTGCACTGGTTCGCTTGCCCAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 72 bp | GGCCCTCCTCTGAGCCAATGGGAGCCTGGAACTCCTTaGCCAGCTGTTGCTTCAGATGGTTGTCATAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GPPLSQWEPGTP*PAVASDGCHSS Trigger: ACTACTATGACAACCATCTGAAGCAACAGCTGGCCAAGGAGTTCCAGGCTCCCATTGGCTCAGAGGAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CAA 72 bp | GCTGTGGCTGCTGAGGCTGCTGCTGCATCACTCTGCTaGTCTTACTCCATCTACGCTGGATGCCTTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: AVAAEAAAASLC*SYSIYAGCLST Trigger: TGTGGAAAGGCATCCAGCGTAGATGGAGTAAGACAAGCAGAGTGATGCAGCAGCAGCCTCAGCAGCCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 72 bp | CTCTCTTTTAAGAAAGGGCTGGATTTGATTCCACTCTaGCTCCTGAGATACCGTCACCACCTCTGCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSFKKGLDLIPL*LLRYRHHLCLE Trigger: CTCCAGGCAGAGGTGGTGACGGTATCTCAGGAGGCAGAGTGGAATCAAATCCAGCCCTTTCTTAAAAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 72 bp | GAAAGGGTATCCAAGAAGATGGAGAAAGAGAGCCACTaGAATCTGCGCATCCCTGGCAGCATAAGTTACCTG | + |
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Preference number: 6 (lower is better) Translates to: ERVSKKMEKESH*NLRIPGSISYL Trigger: CAGGTAACTTATGCTGCCAGGGATGCGCAGATTTCAGTGGCTCTCTTTCTCCATCTTCTTGGATACCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CCA 72 bp | TTAGCCCATGAGGAATATAACTTTCATTGTATATCCTaGTCTCCAGGCTGGCGGCCTCGTGAAGCATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LAHEEYNFHCIS*SPGWRPREASP Trigger: AGGAGATGCTTCACGAGGCCGCCAGCCTGGAGACCAGGATATACAATGAAAGTTATATTCCTCATGGGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 72 bp | GGGAAGCCATCTGTAGGAGTGACAAAGGACTGGCTTTaGCTTCCAAATTCACCCATTCACAGTCAATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: GKPSVGVTKDWL*LPNSPIHSQFQ Trigger: TTGGAATTGACTGTGAATGGGTGAATTTGGAAGGCAAAGCCAGTCCTTTGTCACTCCTACAGATGGCTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CAA 72 bp | TCAGCATCCCAGTTGCTGCAACGAAGTAGAAGGGACTaGTCAAGTGGGAAGTTCAAAATAGTCTCAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SASQLLQRSRRD*SSGKFKIVSAS Trigger: ACTTGCTGAGACTATTTTGAACTTCCCACTTGACAAGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038185.10 ENSMUST00000219272.2 |
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| CDS CAA 72 bp | AAAATCTTCCAACTCTCTTTTAAGAAAGGGCTGGATTaGATTCCACTCTGCCTCCTGAGATACCGTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: KIFQLSFKKGLD*IPLCLLRYRHH Trigger: GTGGTGACGGTATCTCAGGAGGCAGAGTGGAATCAAATCCAGCCCTTTCTTAAAAGAGAGTTGGAAGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS GCA 72 bp | TCATGGGAGTTGTGGTCCTTCATCTCAATAGGGAAATaGTTGCGGTACTCATGTGGAATTATATTTTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SWELWSFISIGK*LRYSCGIIFFR Trigger: CCGGAAAAATATAATTCCACATGAGTACCGCAAGCATTTCCCTATTGAGATGAAGGACCACAACTCCCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS CAA 72 bp | TGGGAGTTGTGGTCCTTCATCTCAATAGGGAAATGCTaGCGGTACTCATGTGGAATTATATTTTTCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: WELWSFISIGKC*RYSCGIIFFRM Trigger: CATCCGGAAAAATATAATTCCACATGAGTACCGCAAGCATTTCCCTATTGAGATGAAGGACCACAACTCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038185.10 |
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| CDS TCA 72 bp | CTTGTCAAGTGGGAAGTTCAAAATAGTCTCAGCAAGTaGTTTCAGGCTAAGCCCATTACAGAGTATATTGTT | + |
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Preference number: 6 (lower is better) Translates to: LVKWEVQNSLSK*FQAKPITEYIV Trigger: AACAATATACTCTGTAATGGGCTTAGCCTGAAATCACTTGCTGAGACTATTTTGAACTTCCCACTTGACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038185.10 ENSMUST00000219272.2 |
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