Pregenerated sensors for EVX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005503Ensembl transcript IDs: ENSMUST00000031787.8, ENSMUST00000129243.3
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCAGTGGCTGGTAGAGGGTACCACTCCCCAGATGCTGTGTAGTTaGGGCCCTGGGAAGGTGAGCCGGCTCCCAGGTTCCTCGCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SQWLVEGTTPQMLCS*GPGKVSRLPGSSPS Trigger: ACTTGGCGAGGAACCTGGGAGCCGGCTCACCTTCCCAGGGCCTCAACTACACAGCATCTGGGGAGTGGTACCCTCTACCAGCCACTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 90 bp | GCCCCTGCCCCTTCCCTGCCAATGTCAAACCGGAAGGGAGAAGGCTaGAGCTGCACAGGTCGGGTCGTGAGATGTCACAAAGCCAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: APAPSLPMSNRKGEG*SCTGRVVRCHKARN Trigger: ATTTCTGGCTTTGTGACATCTCACGACCCGACCTGTGCAGCTCCAGCCTTCTCCCTTCCGGTTTGACATTGGCAGGGAAGGGGCAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR GCA 90 bp | GCCCCTTCCCTGCCAATGTCAAACCGGAAGGGAGAAGGCTGGAGCTaGACAGGTCGGGTCGTGAGATGTCACAAAGCCAGAAATAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: APSLPMSNRKGEGWS*TGRVVRCHKARNRE Trigger: TTCCCTATTTCTGGCTTTGTGACATCTCACGACCCGACCTGTGCAGCTCCAGCCTTCTCCCTTCCGGTTTGACATTGGCAGGGAAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 90 bp | CTCTTCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTaGTGGCCCAGCAGAGTGGTGATCATTATTATACATACATTCAAC | + |
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Preference number: 1 (lower is better) Translates to: LFPGRLVRPAQQLRA*WPSRVVIIIIHTFN Trigger: GTTGAATGTATGTATAATAATGATCACCACTCTGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 90 bp | CAAGTGGCAAGCATCTCCCTAGCAGTAAATCATCTCTCCCCTAAATaGCTGGGATGTTGCCATCAACAAGCCCCCTGCCATGCGTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: QVASISLAVNHLSPK*LGCCHQQAPCHALE Trigger: TTCCAACGCATGGCAGGGGGCTTGTTGATGGCAACATCCCAGCCATTTAGGGGAGAGATGATTTACTGCTAGGGAGATGCTTGCCACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 90 bp | TTCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTGGTaGCCCAGCAGAGTGGTGATCATTATTATACATACATTCAACATT | + |
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Preference number: 1 (lower is better) Translates to: FPGRLVRPAQQLRAW*PSRVVIIIIHTFNI Trigger: AATGTTGAATGTATGTATAATAATGATCACCACTCTGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGAGTGGGGGCCCAGTTaGAGGGTACGAGGGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRSLSSSQGALLDRLSSSEWGPS*RVRGAW Trigger: CCAAGCCCCTCGTACCCTTCAACTGGGCCCCCACTC...GGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTGGTGGCCCAGCAGAGTGGTGGTTTCGGTaGAGAATGGCAAGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SQGALLDRLSSSGLGGPAEWWFR*RMARPG Trigger: GCCAGGCCTTGCCATTCTCCACCGAAACCACCACTC...TGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CAA 90 bp | GTTCCCTTCGCAGCTCTTGCCCTTGACAGGAGAGTGGGGGCCCAGTaGAAGGGTACGAGGGGCTTGGGAGTGGGTTGTTCCCGGGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: VPFAALALDRRVGAQ*KGTRGLGVGCSRVA Trigger: AGCTACCCGGGAACAACCCACTCCCAAGCCCCTCGTACCCTTCAACTGGGCCCCCACTCTCCTGTCAAGGGCAAGAGCTGCGAAGGGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CAA 90 bp | AAGAATGTAAGAAGTCTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTaGTTAGACCGGCTCAGCAGCTCCGGGCTTGGTGGCCCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: KNVRSLRSLSSSQGA*LDRLSSSGLGGPAE Trigger: CTCTGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAGACTTCTTACATTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGAATGTAAGAAGTCTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTCGCAGCTCTTGCCCTTaGCAGGAGAGTGGGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: REECKKSPFPKLFPGRLVRSSCP*QESGGP Trigger: TGGGCCCCCACTCTCCTGTCAAGGGCAAGAGCTGCG...AACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAGACTTCTTACATTCTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCTAATCAGGCTGTGTGCTGGGTTAAGGGAGAAGAGGTTCGCCCCACAGAAGCCCCTGCCCCTTCCCTaGCAATGTCAAACCGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLIRLCAGLREKRFAPQKPLPLP*QCQTGR Trigger: CCTTCCGGTTTGACATTGGCAGGGAAGGGGCAGGGG...CTTCTGTGGGGCGAACCTCTTCTCCCTTAACCCAGCACACAGCCTGATTAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTACCTGCTCTGCATACACAGCATTTTGTTCCAAGAAACAGCGAGTTCCCGAGAATGGCAAGGCCTaGCCACCCCAGGGGACGCTT | + |
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Preference number: 2 (lower is better) Translates to: ISTCSAYTAFCSKKQRVPENGKA*PPQGTL Trigger: AAGCGTCCCCTGGGGTGGCCAGGCCTTGCCATTCTC...GGGAACTCGCTGTTTCTTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CAA 90 bp | CCTAAATGGCTGGGATGTTGCCATCAACAAGCCCCCTGCCATGCGTaGGAAAAGCTGGTGAAGATTAATTTCTACCTGCTCTGCATACAC | + |
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Preference number: 2 (lower is better) Translates to: PKWLGCCHQQAPCHA*EKLVKINFYLLCIH Trigger: GTGTATGCAGAGCAGGTAGAAATTAATCTTCACCAGCTTTTCCAACGCATGGCAGGGGGCTTGTTGATGGCAACATCCCAGCCATTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | CCAAGGCCTCGACCTCTGATAGAGTGGTGGTTTCGGTaGAGAATGGCAAGGCCTGGCCACCCCAGGGGACGC | + |
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Preference number: 3 (lower is better) Translates to: PRPRPLIEWWFR*RMARPGHPRGR Trigger: GCGTCCCCTGGGGTGGCCAGGCCTTGCCATTCTCCACCGAAACCACCACTCTATCAGAGGTCGAGGCCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCAGAGTGGGGGCCCAGTaGAAGGGTACGAGGGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LRSLSSSQGALLDRLSSSRVGAQ*KGTRGL Trigger: CAAGCCCCTCGTACCCTTCAACTGGGCCCCCACTCT...GGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR TCA 72 bp | CAGCTCTTGCCCTTGACAGGAGAGTGGGGGCCCAGTTaGAGGGTACGAGGGGCTTGGGAGTGGGTTGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: QLLPLTGEWGPS*RVRGAWEWVVP Trigger: GGGAACAACCCACTCCCAAGCCCCTCGTACCCTTCAACTGGGCCCCCACTCTCCTGTCAAGGGCAAGAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR TCA 72 bp | CCAGTGAAGGGGAGAGACAGGGTCCTCCAGAGGCGCTaGAGGTTTGTACTGGCAGCTGAAAGCCAAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PVKGRDRVLQRR*RFVLAAESQGP Trigger: AGGGCCTTGGCTTTCAGCTGCCAGTACAAACCTTCAGCGCCTCTGGAGGACCCTGTCTCTCCCCTTCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | GAGACAGGGTCCTCCAGAGGCGCTGAAGGTTTGTACTaGCAGCTGAAAGCCAAGGCCCTGTGGCAATTTGGG | + |
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Preference number: 3 (lower is better) Translates to: ETGSSRGAEGLY*QLKAKALWQFG Trigger: CCCAAATTGCCACAGGGCCTTGGCTTTCAGCTGCCAGTACAAACCTTCAGCGCCTCTGGAGGACCCTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR TCA 72 bp | GGTCCTCCAGAGGCGCTGAAGGTTTGTACTGGCAGCTaGAAGCCAAGGCCCTGTGGCAATTTGGGGAGACAA | + |
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Preference number: 3 (lower is better) Translates to: GPPEALKVCTGS*KPRPCGNLGRQ Trigger: TTGTCTCCCCAAATTGCCACAGGGCCTTGGCTTTCAGCTGCCAGTACAAACCTTCAGCGCCTCTGGAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | GGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTaGTGGCCCAGCAGAGTGGTGATCATTATTATACAT | + |
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Preference number: 3 (lower is better) Translates to: GRLVRPAQQLRA*WPSRVVIIIIH Trigger: ATGTATAATAATGATCACCACTCTGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR GCA 72 bp | ACCCCTCCTCACCCATCACTTGCTAATCAGGCTGTGTaGTGGGTTAAGGGAGAAGAGGTTCGCCCCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: TPPHPSLANQAV*WVKGEEVRPTE Trigger: TTCTGTGGGGCGAACCTCTTCTCCCTTAACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | CCTCCTCACCCATCACTTGCTAATCAGGCTGTGTGCTaGGTTAAGGGAGAAGAGGTTCGCCCCACAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: PPHPSLANQAVC*VKGEEVRPTEA Trigger: AGCTTCTGTGGGGCGAACCTCTTCTCCCTTAACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR TCA 72 bp | GGAAGGGAGAAGGCTGGAGCTGCACAGGTCGGGTCGTaGGATGTCACAAAGCCAGAAATAGGGAAAGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: GREKAGAAQVGS*DVTKPEIGKEV Trigger: GACTTCTTTCCCTATTTCTGGCTTTGTGACATCTCACGACCCGACCTGTGCAGCTCCAGCCTTCTCCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | CGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTGGTaGCCCAGCAGAGTGGTGATCATTATTATACATACA | + |
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Preference number: 3 (lower is better) Translates to: RLVRPAQQLRAW*PSRVVIIIIHT Trigger: TGTATGTATAATAATGATCACCACTCTGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR GCA 72 bp | CAAAGGAAAACCCCAAACCAAACCAAATTCATTCCCTaGAGGAAGGACCACTTCCTCCCAGTGGAGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: QRKTPNQTKFIP*RKDHFLPVEGS Trigger: GCTTCCCTCCACTGGGAGGAAGTGGTCCTTCCTGCAGGGAATGAATTTGGTTTGGTTTGGGGTTTTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | AGCATCTCCCTAGCAGTAAATCATCTCTCCCCTAAATaGCTGGGATGTTGCCATCAACAAGCCCCCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: SISLAVNHLSPK*LGCCHQQAPCH Trigger: ATGGCAGGGGGCTTGTTGATGGCAACATCCCAGCCATTTAGGGGAGAGATGATTTACTGCTAGGGAGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | AGATGTCACAAAGCCAGAAATAGGGAAAGAAGTCAGTaGCTGGTAGAGGGTACCACTCCCCAGATGCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: RCHKARNRERSQ*LVEGTTPQMLC Trigger: ACACAGCATCTGGGGAGTGGTACCCTCTACCAGCCACTGACTTCTTTCCCTATTTCTGGCTTTGTGACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | AAGGACCACTTCCTCCCAGTGGAGGGAAGCCTGCATTaGATGATTGAAGTTGTCCTTTTCCTCAAACACTGG | + |
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Preference number: 3 (lower is better) Translates to: KDHFLPVEGSLH*MIEVVLFLKHW Trigger: CCAGTGTTTGAGGAAAAGGACAACTTCAATCATCCAATGCAGGCTTCCCTCCACTGGGAGGAAGTGGTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR TCA 72 bp | CTTCCTCCCAGTGGAGGGAAGCCTGCATTGGATGATTaGAGTTGTCCTTTTCCTCAAACACTGGCTATAAGG | + |
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Preference number: 3 (lower is better) Translates to: LPPSGGKPALDD*SCPFPQTLAIR Trigger: CCTTATAGCCAGTGTTTGAGGAAAAGGACAACTTCAATCATCCAATGCAGGCTTCCCTCCACTGGGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR TCA 72 bp | ACCACTTCCTCCCAGTGGAGGGAAGCCTGCATTGGATaGTTGAAGTTGTCCTTTTCCTCAAACACTGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: TTSSQWREACIG*LKLSFSSNTGY Trigger: ATAGCCAGTGTTTGAGGAAAAGGACAACTTCAATCATCCAATGCAGGCTTCCCTCCACTGGGAGGAAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CCA 72 bp | GAAGGTTTGTACTGGCAGCTGAAAGCCAAGGCCCTGTaGCAATTTGGGGAGACAATGAGAGAAGAATGTAAG | + |
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Preference number: 3 (lower is better) Translates to: EGLYWQLKAKAL*QFGETMREECK Trigger: CTTACATTCTTCTCTCATTGTCTCCCCAAATTGCCACAGGGCCTTGGCTTTCAGCTGCCAGTACAAACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR TCA 72 bp | ATCAACAAGCCCCCTGCCATGCGTTGGAAAAGCTGGTaGAGATTAATTTCTACCTGCTCTGCATACACAGCA | + |
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Preference number: 3 (lower is better) Translates to: INKPPAMRWKSW*RLISTCSAYTA Trigger: TGCTGTGTATGCAGAGCAGGTAGAAATTAATCTTCACCAGCTTTTCCAACGCATGGCAGGGGGCTTGTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | TCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTGGTGGCCCAGCAGCAGGGTCGGCCGGGTaGGGCCACGTCATGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SQGALLDRLSSSGLGGPAAGSAG*GHVMAS Trigger: GCTGGCCATGACGTGGCCGCACCCGGCCGACCCTGC...TGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR TCA 90 bp | CTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGCACAAGTGAAGTCTaGGGCGGCGGCAGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LRSLSSSQGALLDRLSSSGTSEV*GGGSGG Trigger: GCCGCCGCTGCCGCCGCCTCAGACTTCACTTGTGCC...GGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | TCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTGGTGGCCCAGCACGGAGCCTGGCGCTTTaGTGTGCTGGTACTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SQGALLDRLSSSGLGGPARSLAL*CAGTRR Trigger: ACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCG...TGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR TCA 90 bp | CTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCCAGAGGGGGCGAACGTaGGGAAGGAGTCCGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LRSLSSSQGALLDRLSSSQRGRT*GRSPSG Trigger: CCCGCTCGGACTCCTTCCTCACGTTCGCCCCCTCTG...GGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | TCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCTTGGTGGCCCAGCACTACTAGGTTGCCCTTaGCCAGAGAGGCTGTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: SQGALLDRLSSSGLGGPALLGCP*PERLSA Trigger: CGCGGACAGCCTCTCTGGCCAAGGGCAACCTAGTAG...TGCTGGGCCACCAAGCCCGGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR TCA 90 bp | GTTCCCTTCGCAGCTCTTGCCCTTGACAGGAGAGTGGGGGCCCAGTTGAAGGGTCGGAGGAGGCCTTGCTaGGCACAGAGGGGGCGAACG | + |
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Preference number: 4 (lower is better) Translates to: VPFAALALDRRVGAQLKGRRRPC*AQRGRT Trigger: CGTTCGCCCCCTCTGTGCTCAGCAAGGCCTCCTCCG...ACCCTTCAACTGGGCCCCCACTCTCCTGTCAAGGGCAAGAGCTGCGAAGGGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | CAGCGAGTTCCCTTCGCAGCTCTTGCCCTTGACAGGAGAGTGGGGGCCCAGTTGCCCGGTGGCGCAGTCTaGGGTGCAGCTCACCTCGAT | + |
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Preference number: 4 (lower is better) Translates to: QRVPFAALALDRRVGAQLPGGAV*GAAHLD Trigger: ATCGAGGTGAGCTGCACCCCAGACTGCGCCACCGGG...CAACTGGGCCCCCACTCTCCTGTCAAGGGCAAGAGCTGCGAAGGGAACTCGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | CTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTAGACCGGCTCAGCAGCTCCGGGCACCATCTTCTCTaGCGGTTCAGGCAGCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LRSLSSSQGALLDRLSSSGHHLL*RFRQRA Trigger: AGCCCGCTGCCTGAACCGCCAGAGAAGATGGTGCCC...GGAGCTGCTGAGCCGGTCTAACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | CGGCTCCCAGGTTCCTCGCCAAGTGGCAAGCATCTCCCTAGCAGTAAATCATCTACCGGCTCCTCCTCCTaGCCTCCCCCGCCACGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLPGSSPSGKHLPSSKSSTGSSS*PPPPRS Trigger: GGAGCGTGGCGGGGGAGGCCAGGAGGAGGAGCCGGT...AGATGATTTACTGCTAGGGAGATGCTTGCCACTTGGCGAGGAACCTGGGAGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCATTCCTGCTCCTAAGCAGCCAATGTCGCTTCTGGGGCTCCTGGATCGGTGCGGCCACGTCATaGCCAGCCGCTGACGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PTPFLLLSSQCRFWGSWIGAATS*PAADAC Trigger: ACAAGCGTCAGCGGCTGGCCATGACGTGGCCGCACC...GATCCAGGAGCCCCAGAAGCGACATTGGCTGCTTAGGAGCAGGAATGGGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | GTTCCCTTCGCAGCTCTTGCCCTTGACAGGAGAGTGGGGGCCCAGTTGAAGGGTGGCACCTCCTCTCTCTaGTCCAACGCCGCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: VPFAALALDRRVGAQLKGGTSSL*SNAATE Trigger: CTCCGTGGCGGCGTTGGACCAGAGAGAGGAGGTGCC...ACCCTTCAACTGGGCCCCCACTCTCCTGTCAAGGGCAAGAGCTGCGAAGGGAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCATTCCTGCTCCTAAGCAGCCAATGTCGCTTCTGGGGCTCCTGGATCGGGCTCAGGCAACCGTaGGGCACCATCTTCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PTPFLLLSSQCRFWGSWIGLRQP*GTIFSG Trigger: GCCAGAGAAGATGGTGCCCCACGGTTGCCTGAGCCC...GATCCAGGAGCCCCAGAAGCGACATTGGCTGCTTAGGAGCAGGAATGGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CAA 72 bp | GCAGCTCTTGCCCTTGACAGGAGAGTGGGGGCCCAGTaGAAGGGTACGAGGGGCTTGGGAGTGGGTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: AALALDRRVGAQ*KGTRGLGVGCS Trigger: GGAACAACCCACTCCCAAGCCCCTCGTACCCTTCAACTGGGCCCCCACTCTCCTGTCAAGGGCAAGAGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | TCCCCTAAATGGCTGGGATGTTGCCATCAACAAGCCCCCTGCCATGCGTTGGAATGCCTTGAGAGCCGCTaGCGCCGCTGCCACCGTTAC | + |
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Preference number: 4 (lower is better) Translates to: SPKWLGCCHQQAPCHALECLESR*RRCHRY Trigger: GTAACGGTGGCAGCGGCGGCAGCGGCTCTCAAGGCA...TTCCAACGCATGGCAGGGGGCTTGTTGATGGCAACATCCCAGCCATTTAGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CAA 72 bp | AGGGGAGAGACAGGGTCCTCCAGAGGCGCTGAAGGTTaGTACTGGCAGCTGAAAGCCAAGGCCCTGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RGETGSSRGAEG*YWQLKAKALWQ Trigger: TTGCCACAGGGCCTTGGCTTTCAGCTGCCAGTACAAACCTTCAGCGCCTCTGGAGGACCCTGTCTCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | CGGCTCCCAGGTTCCTCGCCAAGTGGCAAGCATCTCCCTAGCAGTAAATCATCTCCTGGCGCTTTGCTGTaGTGGTACTCGGCGTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLPGSSPSGKHLPSSKSSPGALL*WYSAFP Trigger: CGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGG...AGATGATTTACTGCTAGGGAGATGCTTGCCACTTGGCGAGGAACCTGGGAGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | TTGCTAATCAGGCTGTGTGCTGGGTTAAGGGAGAAGAGGTTCGCCCCACAGAAGCGGTATCGGCGCATCTaGTCACTGGCGCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIRLCAGLREKRFAPQKRYRRI*SLALQA Trigger: GGCCTGCAGCGCCAGTGACCAGATGCGCCGATACCG...CTTCTGTGGGGCGAACCTCTTCTCCCTTAACCCAGCACACAGCCTGATTAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | CATTCAAAAACCCCTCCTCACCCATCACTTGCTAATCAGGCTGTGTGCTGGGTTTTGGCCGGGCCGCTGTaGCAGGCGAGGCAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSKTPPHPSLANQAVCWVLAGPL*QARQEQ Trigger: CTGCTCCTGCCTCGCCTGCCACAGCGGCCCGGCCAA...AACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGGGGTTTTTGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | AGAGAAGAATGTAAGAAGTCTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTGTCCCGGGCCAAGCATaGCCGCTCCAGCAGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: REECKKSPFPKLFPGRLVVPGQA*PLQQTV Trigger: CACGGTCTGCTGGAGCGGCCATGCTTGGCCCGGGAC...AACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAGACTTCTTACATTCTTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | TTGCTAATCAGGCTGTGTGCTGGGTTAAGGGAGAAGAGGTTCGCCCCACAGAAGTGCCACCGTTACTCTTaGGGGCCTCGCTGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLIRLCAGLREKRFAPQKCHRYS*GPRCHW Trigger: CCAGTGGCAGCGAGGCCCCCAAGAGTAACGGTGGCA...CTTCTGTGGGGCGAACCTCTTCTCCCTTAACCCAGCACACAGCCTGATTAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | CATTCAAAAACCCCTCCTCACCCATCACTTGCTAATCAGGCTGTGTGCTGGGTTCAGCAGTTCGGGCCGTaGGTAGGGCTGCGAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSKTPPHPSLANQAVCWVQQFGP*VGLREH Trigger: GTGCTCTCGCAGCCCTACCCACGGCCCGAACTGCTG...AACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGGGGTTTTTGAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | AGAGAAGAATGTAAGAAGTCTCCGTTCCCTAAGCTCTTCCCAGGGCGCCTTGTTGGCGCTTTGCTGTGCTaGTACTCGGCGTTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: REECKKSPFPKLFPGRLVGALLC*YSAFPV Trigger: CACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCC...AACAAGGCGCCCTGGGAAGAGCTTAGGGAACGGAGACTTCTTACATTCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | AAAACCCCTCCTCACCCATCACTTGCTAATCAGGCTGTGTGCTGGGTTAAGGGATCCAGCCTTGCAATCTaGTCCCGGGTAAAGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTPPHPSLANQAVCWVKGSSLAI*SRVKAV Trigger: CACGGCCTTTACCCGGGAGCAGATTGCAAGGCTGGA...TCCCTTAACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGGGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | CATTCAAAAACCCCTCCTCACCCATCACTTGCTAATCAGGCTGTGTGCTGGGTTGTTCAGGCAGCGGGCTaGTCACGGCTTCGGACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSKTPPHPSLANQAVCWVVQAAG*SRLRTN Trigger: ATTTGTCCGAAGCCGTGAGCAGCCCGCTGCCTGAAC...AACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGGGGTTTTTGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | AGATTAATTTCTACCTGCTCTGCATACACAGCATTTTGTTCCAAGAAACAGCGACGCTGCAGGCCAGGGTaGCTTGAGAGCCGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLISTCSAYTAFCSKKQRRCRPG*LESRCR Trigger: GCGGCAGCGGCTCTCAAGGCACCCTGGCCTGCAGCG...TCGCTGTTTCTTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAATTAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CCA 90 bp | AGATTAATTTCTACCTGCTCTGCATACACAGCATTTTGTTCCAAGAAACAGCGAGTCCGCGGAGGGGACTaGGGGTCCCGGGCCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLISTCSAYTAFCSKKQRVRGGD*GSRAKH Trigger: ATGCTTGGCCCGGGACCCCCAGTCCCCTCCGCGGAC...TCGCTGTTTCTTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAATTAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | CATTCAAAAACCCCTCCTCACCCATCACTTGCTAATCAGGCTGTGTGCTGGGTTTCTTACCAACCAGAGTaGCAAGCTGACCCCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSKTPPHPSLANQAVCWVSYQPE*QADPHP Trigger: TGGATGGGGGTCAGCTTGGCACTCTGGTTGGTAAGA...AACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGGGGTTTTTGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| 3UTR CAA 72 bp | CTGGGATGTTGCCATCAACAAGCCCCCTGCCATGCGTaGGAAAAGCTGGTGAAGATTAATTTCTACCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGCCHQQAPCHA*EKLVKINFYLL Trigger: GAGCAGGTAGAAATTAATCTTCACCAGCTTTTCCAACGCATGGCAGGGGGCTTGTTGATGGCAACATCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS-3UTR GCA 90 bp | AGATTAATTTCTACCTGCTCTGCATACACAGCATTTTGTTCCAAGAAACAGCGACCAGCCCTGCAGCACTaGCTGCTAGTCCATCGACCG | + |
|
Preference number: 4 (lower is better) Translates to: RLISTCSAYTAFCSKKQRPALQH*LLVHRP Trigger: CGGTCGATGGACTAGCAGGCAGTGCTGCAGGGCTGG...TCGCTGTTTCTTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAATTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGTGAAGATTAATTTCTACCTGCTCTGCATACACAGCATTTTGTTCCAATCTGGTCACTGGCGCTaGAGGCCAGGGTGCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLVKINFYLLCIHSILFQSGHWR*RPGCLE Trigger: CTCAAGGCACCCTGGCCTGCAGCGCCAGTGACCAGA...TTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAATTAATCTTCACCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR GCA 90 bp | AAGCTGGTGAAGATTAATTTCTACCTGCTCTGCATACACAGCATTTTGTTCCAATGGCGCAGTCTGGGGTaGAGCTCACCTCGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLVKINFYLLCIHSILFQWRSLG*SSPRFL Trigger: AAGAAATCGAGGTGAGCTGCACCCCAGACTGCGCCA...TTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAATTAATCTTCACCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| 3UTR CAA 72 bp | AAGATTAATTTCTACCTGCTCTGCATACACAGCATTTaGTTCCAAGAAACAGCGAGTTCCCTTCGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KINFYLLCIHSI*FQETASSLRSS Trigger: AGAGCTGCGAAGGGAACTCGCTGTTTCTTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAATTAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS CCA 90 bp | CAGAGAGGCTGTCCGCGGAGGGGACTGGGGGTCCCGGGCCAAGCATaGCCGCTCCAGCAGACCGTGGCTCGGCGCCCAGCCCTGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRGCPRRGLGVPGQA*PLQQTVARRPALQH Trigger: GTGCTGCAGGGCTGGGCGCCGAGCCACGGTCTGCTGGAGCGGCCATGCTTGGCCCGGGACCCCCAGTCCCCTCCGCGGACAGCCTCTCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031787.8 ENSMUST00000129243.3 |
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| CDS CCA 90 bp | CGCTCCCGGGAAGTCGGAGGGCCGGCTCGCGGGCTCAGGCAACCGTaGGGCACCATCTTCTCTGGCGGTTCAGGCAGCGGGCTGCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: RSREVGGPARGLRQP*GTIFSGGSGSGLLT Trigger: CGTGAGCAGCCCGCTGCCTGAACCGCCAGAGAAGATGGTGCCCCACGGTTGCCTGAGCCCGCGAGCCGGCCCTCCGACTTCCCGGGAGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031787.8 ENSMUST00000129243.3 |
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| CDS CCA 90 bp | GCTACTAGGTTGCCCTTGGCCAGAGAGGCTGTCCGCGGAGGGGACTaGGGGTCCCGGGCCAAGCATGGCCGCTCCAGCAGACCGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATRLPLAREAVRGGD*GSRAKHGRSSRPWL Trigger: GAGCCACGGTCTGCTGGAGCGGCCATGCTTGGCCCGGGACCCCCAGTCCCCTCCGCGGACAGCCTCTCTGGCCAAGGGCAACCTAGTAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031787.8 ENSMUST00000129243.3 |
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| CDS GCA 90 bp | CTGGTAGGACTGCTACCCAGAGCATCGGAGCCTGGCGCTTTGCTGTaGTGGTACTCGGCGTTCCCGGTGGCGCAGTCTGGGGTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVGLLPRASEPGALL*WYSAFPVAQSGVQL Trigger: GAGCTGCACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGATGCTCTGGGTAGCAGTCCTACCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS CCA 90 bp | AGGGCCGGCTCGCGGGCTCAGGCAACCGTGGGGCACCATCTTCTCTaGCGGTTCAGGCAGCGGGCTGCTCACGGCTTCGGACAAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGSRAQATVGHHLL*RFRQRAAHGFGQIR Trigger: TCTAATTTGTCCGAAGCCGTGAGCAGCCCGCTGCCTGAACCGCCAGAGAAGATGGTGCCCCACGGTTGCCTGAGCCCGCGAGCCGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031787.8 ENSMUST00000129243.3 |
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| CDS CCA 90 bp | GTAGGACTGCTACCCAGAGCATCGGAGCCTGGCGCTTTGCTGTGCTaGTACTCGGCGTTCCCGGTGGCGCAGTCTGGGGTGCAGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VGLLPRASEPGALLC*YSAFPVAQSGVQLT Trigger: GGTGAGCTGCACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGATGCTCTGGGTAGCAGTCCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCATTCCTGCTCCTAAGCAGCCAATGTCGCTTCTGGGGCTCCTGGATCTCGGAGCCTGGCGCTTaGCTGTGCTGGTACTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PTPFLLLSSQCRFWGSWISEPGA*LCWYSA Trigger: CGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGA...GATCCAGGAGCCCCAGAAGCGACATTGGCTGCTTAGGAGCAGGAATGGGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CAA 90 bp | CCCACCCCATTCCTGCTCCTAAGCAGCCAATGTCGCTTCTGGGGCTCCTGGATCGCTACTAGGTTGCCCTaGGCCAGAGAGGCTGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PTPFLLLSSQCRFWGSWIATRLP*AREAVR Trigger: GCGGACAGCCTCTCTGGCCAAGGGCAACCTAGTAGC...GATCCAGGAGCCCCAGAAGCGACATTGGCTGCTTAGGAGCAGGAATGGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS-3UTR CAA 90 bp | CATTCAAAAACCCCTCCTCACCCATCACTTGCTAATCAGGCTGTGTGCTGGGTTGCAGGCCAGGGTGCCTaGAGAGCCGCTGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSKTPPHPSLANQAVCWVAGQGA*RAAAAA Trigger: AGCGGCGGCAGCGGCTCTCAAGGCACCCTGGCCTGC...AACCCAGCACACAGCCTGATTAGCAAGTGATGGGTGAGGAGGGGTTTTTGAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS TCA 90 bp | CGGAGCCTGGCGCTCGATTTCTTCATAGAAATCCGATTCGGTGTCTaGGCTACTAGGTTGCCCTTGGCCAGAGAGGCTGTCCGCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLALDFFIEIRFGV*ATRLPLAREAVRGG Trigger: CCCTCCGCGGACAGCCTCTCTGGCCAAGGGCAACCTAGTAGCTCAGACACCGAATCGGATTTCTATGAAGAAATCGAGCGCCAGGCTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129243.3 |
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| CDS CCA 90 bp | CATCGGAGCCTGGCGCTTTGCTGTGCTGGTACTCGGCGTTCCCGGTaGCGCAGTCTGGGGTGCAGCTCACCTCGATTTCTTCATAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HRSLALCCAGTRRSR*RSLGCSSPRFLHRN Trigger: ATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS CCA 90 bp | TGGCGCTTTGCTGTGCTGGTACTCGGCGTTCCCGGTGGCGCAGTCTaGGGTGCAGCTCACCTCGATTTCTTCATAGAAATCCGATTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: WRFAVLVLGVPGGAV*GAAHLDFFIEIRFG Trigger: ACCGAATCGGATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS TCA 90 bp | GGTGCAGCTCACCTCGATTTCTTCATAGAAATCCGATTCGGTGTCTaGGCTACTAGGTTGCCCTTGGCCAGAGAGGCTGTCCGCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAAHLDFFIEIRFGV*ATRLPLAREAVRGG Trigger: CCCTCCGCGGACAGCCTCTCTGGCCAAGGGCAACCTAGTAGCTCAGACACCGAATCGGATTTCTATGAAGAAATCGAGGTGAGCTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS GCA 90 bp | CTTTGCTGTGCTGGTACTCGGCGTTCCCGGTGGCGCAGTCTGGGGTaGAGCTCACCTCGATTTCTTCATAGAAATCCGATTCGGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCCAGTRRSRWRSLG*SSPRFLHRNPIRCL Trigger: CAGACACCGAATCGGATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCTACCTGCTCTGCATACACAGCATTTTGTTCCAAGAAACAGCGAGTTCCCCGCATCTCCGCGGTCTaGAAACGTAGTTCTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISTCSAYTAFCSKKQRVPRISAV*KRSSPC Trigger: ACAGGGAGAACTACGTTTCAAGACCGCGGAGATGCG...GGGAACTCGCTGTTTCTTGGAACAAAATGCTGTGTATGCAGAGCAGGTAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
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| CDS GCA 72 bp | CAGCAGACCGTGGCTCGGCGCCCAGCCCTGCAGCACTaGCTGCTAGTCCATCGACCGGCTCCTCCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QQTVARRPALQH*LLVHRPAPPPG Trigger: GCCAGGAGGAGGAGCCGGTCGATGGACTAGCAGGCAGTGCTGCAGGGCTGGGCGCCGAGCCACGGTCTGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031787.8 ENSMUST00000129243.3 |
||
| CDS CCA 72 bp | TCGCGGGCTCAGGCAACCGTGGGGCACCATCTTCTCTaGCGGTTCAGGCAGCGGGCTGCTCACGGCTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SRAQATVGHHLL*RFRQRAAHGFG Trigger: TCCGAAGCCGTGAGCAGCCCGCTGCCTGAACCGCCAGAGAAGATGGTGCCCCACGGTTGCCTGAGCCCGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031787.8 ENSMUST00000129243.3 |
||
| CDS GCA 72 bp | CTGCTACCCAGAGCATCGGAGCCTGGCGCTTTGCTGTaGTGGTACTCGGCGTTCCCGGTGGCGCAGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPRASEPGALL*WYSAFPVAQSG Trigger: CCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGATGCTCTGGGTAGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS CCA 72 bp | CTACCCAGAGCATCGGAGCCTGGCGCTTTGCTGTGCTaGTACTCGGCGTTCCCGGTGGCGCAGTCTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPRASEPGALLC*YSAFPVAQSGV Trigger: CACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGATGCTCTGGGTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS CAA 90 bp | CTGCCACTGGTAGGACTGCTACCCAGAGCATCGGAGCCTGGCGCTTaGCTGTGCTGGTACTCGGCGTTCCCGGTGGCGCAGTCTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPLVGLLPRASEPGA*LCWYSAFPVAQSGV Trigger: CACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGATGCTCTGGGTAGCAGTCCTACCAGTGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS CAA 72 bp | GTAGGACTGCTACCCAGAGCATCGGAGCCTGGCGCTTaGCTGTGCTGGTACTCGGCGTTCCCGGTGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGLLPRASEPGA*LCWYSAFPVAQ Trigger: CTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGCGCCAGGCTCCGATGCTCTGGGTAGCAGTCCTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS GCA 72 bp | GCTGGTACTCGGCGTTCCCGGTGGCGCAGTCTGGGGTaGAGCTCACCTCGATTTCTTCATAGAAATCCGATT | + |
|
Preference number: 6 (lower is better) Translates to: AGTRRSRWRSLG*SSPRFLHRNPI Trigger: AATCGGATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCAGACTGCGCCACCGGGAACGCCGAGTACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS TCA 72 bp | GCGCTCGATTTCTTCATAGAAATCCGATTCGGTGTCTaGGCTACTAGGTTGCCCTTGGCCAGAGAGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ALDFFIEIRFGV*ATRLPLAREAV Trigger: GACAGCCTCTCTGGCCAAGGGCAACCTAGTAGCTCAGACACCGAATCGGATTTCTATGAAGAAATCGAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129243.3 |
||
| CDS TCA 72 bp | CACCTCGATTTCTTCATAGAAATCCGATTCGGTGTCTaGGCTACTAGGTTGCCCTTGGCCAGAGAGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HLDFFIEIRFGV*ATRLPLAREAV Trigger: GACAGCCTCTCTGGCCAAGGGCAACCTAGTAGCTCAGACACCGAATCGGATTTCTATGAAGAAATCGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS CAA 90 bp | TTTCAGGAAGGTTTAAGGCTGCTGCCAGTTCGCATCTCCGCGGTCTaGAAACGTAGTTCTCCCTGTAGAACTCTTTCTCCAGCCTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FQEGLRLLPVRISAV*KRSSPCRTLSPALQ Trigger: TTGCAAGGCTGGAGAAAGAGTTCTACAGGGAGAACTACGTTTCAAGACCGCGGAGATGCGAACTGGCAGCAGCCTTAAACCTTCCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031787.8 |
||
| CDS TCA 72 bp | AAATTAGAGACCCTCTTACCAACCAGAGTGCCAAGCTaGCCCCCATCCAGAAACATAACCATGTCCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KLETLLPTRVPS*PPSRNITMSFR Trigger: CCGAAAGGACATGGTTATGTTTCTGGATGGGGGTCAGCTTGGCACTCTGGTTGGTAAGAGGGTCTCTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031787.8 ENSMUST00000129243.3 |
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