RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EVPL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034282

Ensembl transcript IDs: ENSMUST00000037007.4

Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTaGGGTGGACACTCAGGAGGAGGACCCGCTGCCTCGGATTACGCA +
Preference number: 1 (lower is better)
Translates to: SHIWGQSPTPQTIAQ*GGHSGGGPAASDYA
Trigger: TGCGTAATCCGAGGCAGCGGGTCCTCCTCCTGAGTGTCCACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
3UTR-3UTR TCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGAGCTCCAGGGCAAGGTaGCGTGTGCATTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGSSRAR*RVHSPS
Trigger: GGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCT...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
3UTR TCA 72 bp TGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTaGGGTGGACACTCAGGAGGAGGACCCGCTGCCTCG +
Preference number: 3 (lower is better)
Translates to: WGQSPTPQTIAQ*GGHSGGGPAAS
Trigger: CGAGGCAGCGGGTCCTCCTCCTGAGTGTCCACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
3UTR CCA 72 bp CACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTaGGGACAGAGCCCAACACCACAAACGATTGCGCAG +
Preference number: 3 (lower is better)
Translates to: HGVGRNNGTSHI*GQSPTPQTIAQ
Trigger: CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCTCCACCACGGGCTTCTaGGCCCGCAGGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPRITQLQGKVTCAFSLPSTTGF*ARRTSS
Trigger: GCTGGAGGTCCTGCGGGCTCAGAAGCCCGTGGTGGA...GGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTAGCCGCGCCACAGGCTaGTGGGTCCTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAASDYAAPGQGDVCILPSRATG*WVLSCS
Trigger: GCTGCAGCTGAGGACCCAGCAGCCTGTGGCGCGGCT...AGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCATGGCAGCCTCGAGCTaGGTGACCGCCTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLMAASS*VTAWLR
Trigger: GCGGAGCCAGGCGGTCACGCAGCTCGAGGCTGCCAT...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCGAACCTGGCGCTGCTaGCGCGGCAGGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PAASDYAAPGQGDVCILPRTWRC*RGRSWQ
Trigger: CTGCCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCG...AGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCCTGTCTCCTGCAGCTaGGCCCGGAGCCTCCGGATC +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSPVSCS*ARSLRI
Trigger: GATCCGGAGGCTCCGGGCCCAGCTGCAGGAGACAGG...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGGTCCCGGGCCCTCTaGAGCTCAGCTTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLWSRAL*SSASSR
Trigger: CCGCGAGGAAGCTGAGCTCCAGAGGGCCCGGGACCA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCGTGCCCTCACAGCTGTaGATGCGGCCCTCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLVPSQL*MRPSRS
Trigger: GGACCTCGAGGGCCGCATCCACAGCTGTGAGGGCAC...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCACGCACACAGGATCTTaGCAGGGTGGGGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LPRITQLQGKVTCAFSLPTHTGS*QGGGGR
Trigger: GCGGCCTCCCCCACCCTGCCAAGATCCTGTGTGCGT...GGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCGATCCTCCTCGAAGCTaGGCCTGGCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLDPPRS*AWPPPP
Trigger: AGGAGGAGGAGGCCAGGCTCAGCTTCGAGGAGGATC...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTCTGGGTCTCCTGGTTaGGCTCCTCCCGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLSGSPG*APPGSP
Trigger: AGGTGAGCCGGGAGGAGCTCAACCAGGAGACCCAGA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCTGGCGCAGCTGCTGCTaGTCAGCTGCGGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: LPRITQLQGKVTCAFSLPWRSCC*SAAATS
Trigger: TGAGGTTGCCGCAGCTGAGCAGCAGCAGCTGCGCCA...GGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTCCAGCCCTTCTGGATaGCCTCACCCACCGACAGCC +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLSSPSG*PHPPTA
Trigger: GGCTGTCGGTGGGTGAGGCCATCCAGAAGGGCTGGA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGAAGGATCTTGGCAGGGTaGGGGAGGCCGCGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRRILAG*GRPRGS
Trigger: GCTACCGCGCGGCCTCCCCCACCCTGCCAAGATCCT...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCACCCGGGATGCTGCCTaGGACAGGTTACTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLTRDAA*DRLLSS
Trigger: GCTGGAGAGTAACCTGTCTCAGGCAGCATCCCGGGT...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCTGGAGGTGTTCTCAATaGGTCCCCGCTCCACCGCCT +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSWRCSQ*VPAPPP
Trigger: AGGCGGTGGAGCGGGGACTCATTGAGAACACCTCCA...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCCAGATGCTGTCCACGTaGAGGGGCTGCTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLQMLST*RGCLDG
Trigger: CCCATCCAAGCAGCCCCTGCACGTGGACAGCATCTG...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCTCGCTGACTCGCTCCTaGAGCTGCACCTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLSLTRS*SCTLGF
Trigger: GAAGCCCAAGGTGCAGCTGCAGGAGCGAGTCAGCGA...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCACTCTTCTTTGGAAATaGGGCGGCAGCGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSTLLWK*GGSGGR
Trigger: CCGCCCTCCGCTGCCGCCGCATTTCCAAAGAAGAGT...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCATCTTGAGGGCCTCCTaGTGGACCTGGATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSILRAS*WTWMGP
Trigger: TGGGCCCATCCAGGTCCACCAGGAGGCCCTCAAGAT...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGATGGGTTCCTGCGCTGTaGCAGTGGGGCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRWVPAL*QWGHLL
Trigger: CAGGAGGTGGCCCCACTGCCACAGCGCAGGAACCCA...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCTTCAGGGTCTGGTGCTaGGATGCAGAGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLFRVWC*DAEAGS
Trigger: GCTGCCTGCCTCTGCATCCCAGCACCAGACCCTGAA...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCACCCTGTCTGCCTCCTaGATCTGCTTCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSTLSAS*ICFSRP
Trigger: GGGCCTGGAGAAGCAGATCCAGGAGGCAGACAGGGT...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCGTAGGAAATCTGGCTTaGCCCGTCGCTGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSVGNLA*PVAGLH
Trigger: GTGCAGCCCAGCGACGGGCCAAGCCAGATTTCCTAC...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCGTCTCCGGGAGCACCTaGAAGATCTCGCTGACTCGC +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLVSGST*KISLTR
Trigger: GCGAGTCAGCGAGATCTTCCAGGTGCTCCCGGAGAC...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCGGAAGCACGCTTTCCTaGGGCATCCAGCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLGSTLS*GIQPFW
Trigger: CCAGAAGGGCTGGATGCCCCAGGAAAGCGTGCTTCC...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGATGCGGCAGCGCCCCATaGCCTCCTTGTAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRCGSAP*PPCSSA
Trigger: GGCTGAGCTACAAGGAGGCCATGGGGCGCTGCCGCA...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTATCCAGGTTGGAGCTaGGCTTTGCCAGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLYPGWS*ALPGSG
Trigger: GCCAGACCCTGGCAAAGCTCAGCTCCAACCTGGATA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGATCCTCTTGGGGTCGATaGGGCCCCCAGTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRSSWGR*GPQSGA
Trigger: AGCACCTGACTGGGGGCCTCATCGACCCCAAGAGGA...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTTGTGCTCGGCCACCTaGTGTTCCAGCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLLCSAT*CSSSAI
Trigger: GATGGCAGAGCTGGAACAGCAGGTGGCCGAGCACAA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTTCTGCTTCAGGGTCTaGAGCTCCGTGGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLFCFRV*SSVASL
Trigger: TAGGCTGGCCACGGAGCTGCAGACCCTGAAGCAGAA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCACAGCTTCAGGGTCTaGTGCTGGGATGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSHSFRV*CWDAEA
Trigger: TGCCTCTGCATCCCAGCACCAGACCCTGAAGCTGTG...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCGCGGCTTCAAAGCCTTaGATGACCCTGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLAASKP*MTLSAS
Trigger: GGAGGCAGACAGGGTCATCCAAGGCTTTGAAGCCGC...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCAGGGGCTGGAGGTTGTaGCTTCTTCCCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: LPRITQLQGKVTCAFSLPRGWRL*LLPSHT
Trigger: AGTGTGACTGGGAAGAAGTCACAACCTCCAGCCCCT...GGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCTCAGCCTCTCCTTGGTaGTGGGGTCTGTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSSASPW*WGLSDP
Trigger: AGGATCTGACAGACCCCATCACCAAGGAGAGGCTGA...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCCTCCCGCACCTCCTaGCGGAGCCTCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCASRTS*RSLSAS
Trigger: GGAGGCCGAGAGGCTCCGGCAGGAGGTGCGGGAGGC...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCGCCTCCAACAGCTTCTaGCCAGTGATAGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLASNSF*PVIGSS
Trigger: GCTGGATCCTATCACTGGGCAGAAGCTGTTGGAGGC...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCAGATCCCCATCCAGCTaGGTCATCTGTGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSRSPSS*VICDRS
Trigger: GCTCCTGTCACAGATGACCCAGCTGGATGGGGATCT...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGGTGAGGGCACGAACCTaGCGCTGCTGGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQVRART*RCWRGR
Trigger: CCTGCCGCGCCAGCAGCGCCAGGTTCGTGCCCTCAC...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCGCAGGTGAGGTTGCATaGTCTTCCTCTTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLAGEVA*SSSCPP
Trigger: TGGAGGGCAAGAGGAAGACCATGCAACCTCACCTGC...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCGCTTCTCCAGCTCCTaGATCTTCAGGGTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSRFSSS*IFRVSC
Trigger: GCAACTGACCCTGAAGATCCAGGAGCTGGAGAAGCG...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGACCGCCTGGCTCCGCTaGGCGGCCTTCTGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGTAWLR*AAFWRS
Trigger: CGAGCGCCAGAAGGCCGCCCAGCGGAGCCAGGCGGT...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCACCAGATTCTGTTTCTaGTCCAACACACGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSTRFCF*SNTRAQ
Trigger: CTGGGCGCGTGTGTTGGAGCAGAAACAGAATCTGGT...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCGCAGCGGTAGGTATCTaGTTGCAGCTCATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLAAVGI*LQLIVL
Trigger: CAGGACTATGAGCTGCAAGCAGATACCTACCGCTGC...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCGGCTCAGCCGGCTGTaGTCCTCGCGCAGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIARLSRL*SSRSFG
Trigger: CCCGAAGCTGCGCGAGGAGCACAGCCGGCTGAGCCG...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGCTGGGCTGCACCCGGTaGTGGGGCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGLGCTR*WGSCSS
Trigger: GCTGGAGCAGCTGCCCCACCACCGGGTGCAGCCCAG...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTTCTTGGTCTCCACCTTaGACCTTTCCCGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: PAASDYAAPGQGDVCILPSWSPP*TFPAST
Trigger: AGTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGA...AGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCGGTCCTTCTCGACCCTaGTCACTTCCTTGTATATGG +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLGPSRP*SLPCIW
Trigger: CCATATACAAGGAAGTGATCAGGGTCGAGAAGGACC...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTGCCTGGATGCTCTCCTaGAAGGAAATCACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PAASDYAAPGQGDVCILPAWMLS*KEITLS
Trigger: ACTCAGAGTGATTTCCTTGCAGGAGAGCATCCAGGC...AGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGAGGCCCCCAGTCAGGTaGTGTACCAGCAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LPIFGDRAQHHKRLRSEVRPPVR*CTSRWG
Trigger: TCCCCACCTGCTGGTACAGCACCTGACTGGGGGCCT...CACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATGCGCCCAGTCGACCCTaGGCCCCACATCAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDAPSRP*APHQAE
Trigger: TTCCGCCTGATGTGGGGCCCAGGGTCGACTGGGCGC...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCGCGCCACAGGCTGCTaGGTCCTCAGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIARATGC*VLSCSS
Trigger: GCTGCTGCAGCTGAGGACCCAGCAGCCTGTGGCGCG...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGACCTGCAGCTGCACCTTaGGCTTCTGCTTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRPAAAP*ASAFPP
Trigger: TGGTGGAAAAGCAGAAGCCCAAGGTGCAGCTGCAGG...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGCAGTCCTGGCTTGCCTaGTCCCGGGCCCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGQSWLA*SRALWS
Trigger: GCTCCAGAGGGCCCGGGACCAGGCAAGCCAGGACTG...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCATCTTGTCCTTTTCCTaGAGAATGGCAGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLILSFS*RMAASS
Trigger: GCTCGAGGCTGCCATTCTCCAGGAAAAGGACAAGAT...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGACGGATGAGCTGCTCCTaGGAGCGCCCGTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRRMSCS*ERPLVL
Trigger: CAACACCAACGGGCGCTCTCAGGAGCAGCTCATCCG...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGACAGCCTCTTCCTGGTaGCAGGGTCCTCGATGCCGG +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQTASSW*QGPRCR
Trigger: CCGGCATCGAGGACCCTGTCACCAGGAAGAGGCTGT...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGATTCTGCCGATCCTGTTaGAGCTTCTTCTGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRFCRSC*SFFCVS
Trigger: GGAGACGCAGAAGAAGCTGCAACAGGATCGGCAGAA...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCAGGTGGCACAGGCTCTaGACATCATTGTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LPRITQLQGKVTCAFSLPRWHRL*TSLYLF
Trigger: GAACAGATACAATGATGTGCAGAGCCTGTGCCACCT...GGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATGACGGGGCCCTCAAGTaGCAGGGCGGCTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDDGALK*QGGFKA
Trigger: GGCTTTGAAGCCGCCCTGGCACTTGAGGGCCCCGTC...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGGACCCTCTCCTGCAGTaGCCCAGAGCCTTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIADPLLQ*PRAFGD
Trigger: GTCCCCGAAGGCTCTGGGGCACTGCAGGAGAGGGTC...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATAGCTGGCGCAGCTGCTaGTGCTCAGCTGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDSWRSC*CSAAAT
Trigger: GGTTGCCGCAGCTGAGCAGCAGCAGCTGCGCCAGCT...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGTCCAGCTGGCGCAGCTaGTGCTGCTCAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIASSWRS*CCSAAA
Trigger: TGCCGCAGCTGAGCAGCAGCAGCTGCGCCAGCTGGA...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGAGCTGCAGCAGCCGCTaGCTCTGCTCCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRSCSSR*LCSSRS
Trigger: TGACCTGGAGGAGCAGAGGCAGCGGCTGCTGCAGCT...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAATCCTGCACCACTATCTaGTCCTCGGGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKSCTTI*SSGRLL
Trigger: GAGGAGGCGGCCCGAGGAGCAGATAGTGGTGCAGGA...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGCCCGCAGTCCTGGCTTaGCTGGTCCCGGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLPAVLA*LVPGPL
Trigger: CAGAGGGCCCGGGACCAGGCAAGCCAGGACTGCGGG...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGGCAGAGGCAGGCAGCTaGGGCACTTTTGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPIFGDRAQHHKRLRSEVAEAGS*GTFGLS
Trigger: GGAGAGACCAAAAGTGCCCCAGCTGCCTGCCTCTGC...CACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGAGAAGACTGGCTCAGTaGGCTCCGGGCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQRRLAQ*APGPAQ
Trigger: CTGAGCTGGGCCCGGAGCCCACTGAGCCAGTCTTCT...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGTGCACGCATGCTCAGTaGCCTTCAGCTGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPIFGDRAQHHKRLRSEVCTHAQ*PSAGGA
Trigger: TGCACCGCCAGCTGAAGGCCACTGAGCATGCGTGCA...CACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGGCTGCACCCGGTGGTaGGGCAGCTGCTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIGCTRW*GSCSSQ
Trigger: TTGGCTGGAGCAGCTGCCCCACCACCGGGTGCAGCC...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATCGGGTCTGGGTCTCCTaGTTGAGCTCCTCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDRVWVS*LSSSRL
Trigger: GAGCCGGGAGGAGCTCAACCAGGAGACCCAGACCCG...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGATGTGGTACTCTTCTTTaGAAATGCGGCGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRCGTLL*KCGGSG
Trigger: TCCGCTGCCGCCGCATTTCCAAAGAAGAGTACCACA...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGCTTGCATGCGGGAGATaGGCAGAGCCAGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQLACGR*AEPVPG
Trigger: CCCAGGAACTGGCTCTGCTCATCTCCCGCATGCAAG...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAATGGGCTCCACTGAGCTaGTCGCCTGCTCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKWAPLS*SPAPGL
Trigger: AAGACCTGGAGCAGGCGATCAGCTCAGTGGAGCCCA...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGCCTGGAAGATCTCGCTaGCTCGCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRPGRSR*LAPAAA
Trigger: TGCAGCTGCAGGAGCGAGTCAGCGAGATCTTCCAGG...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGACGCGGTTCTTCTCCTaGTCCAGCTCGCGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGTRFFS*SSSRRR
Trigger: TCTGCGGCGCGAGCTGGATCAGGAGAAGAACCGCGT...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGGCTTGGATGGGTTCCTaGGCTGTGGCAGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIAAWMGS*AVAVGP
Trigger: TGGCCCCACTGCCACAGCGCAGGAACCCATCCAAGC...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGCCTCACAGCTGTGGATaGGGCCCTCGAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRPHSCG*GPRGPS
Trigger: TGAAGGACCTCGAGGGCCGCATCCACAGCTGTGAGG...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGCACGAACCTGGCGCTaGTGGCGCGGCAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLARTWR*WRGRSW
Trigger: CCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCGTGC...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGCGGCGGCCAGCTTCTTaGTGCGATCCTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGRRPAS*CDPPRS
Trigger: GCTTCGAGGAGGATCGCAGCAAGAAGCTGGCCGCCG...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGCCTGGTGGACCTGGATaGGCCCAATGGCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLPGGPG*AQWPGA
Trigger: GGCACCCGGCCATTGGGCCCATCCAGGTCCACCAGG...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGCCTCCTGGTGGACCTaGATGGGCCCAATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLASWWT*MGPMAG
Trigger: CCCGGCCATTGGGCCCATCCAGGTCCACCAGGAGGC...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCGTGCAGGGGCTGCTTaGATGGGTTCCTGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIARAGAA*MGSCAV
Trigger: CACAGCGCAGGAACCCATCCAAGCAGCCCCTGCACG...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGGGCCCAGAGCAGCCTTaGCTTTCTCCCCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: LPIFGDRAQHHKRLRSEVGPEQP*LSPHRG
Trigger: ACCTCTATGGGGAGAAAGCCAAGGCTGCTCTGGGCC...CACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGCTCCCGCAGCACCTCTaGGTTCTTCTCGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQLPQHL*VLLVPH
Trigger: GTGAGGCACGAGAAGAACCCAGAGGTGCTGCGGGAG...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAAAGCTTCGGGTCCTTCTaGGTGACCACCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKSFGSF*VTTTSC
Trigger: GCAGGAGGTGGTGGTCACCCAGAAGGACCCGAAGCT...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGGGTACTCTGGGGGCCTaGGGAGCAGACTGGAGACTT +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQGTLGA*GADWRL
Trigger: AAGTCTCCAGTCTGCTCCCCAGGCCCCCAGAGTACC...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTCCTCCCGTGGCTGCCTaGGCCTCCAACAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIPPVAA*ASNSFC
Trigger: GCAGAAGCTGTTGGAGGCCCAGGCAGCCACGGGAGG...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGCAGCTGGGTCATCTGTaGCAGGAGCGTCTGACCTTG +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQQLGHL*QERLTL
Trigger: CAAGGTCAGACGCTCCTGTCACAGATGACCCAGCTG...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTTCGGGTCCTTCTGGGTaGCCACCACCTCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTISGPSG*PPPPAP
Trigger: TGGTGCAGGAGGTGGTGGTCACCCAGAAGGACCCGA...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAATGCTTCGTGCAGCCTTaGAGGTGGGTGTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKCFVQP*RWVYRL
Trigger: CAGCCTGTACACCCACCTGCAAGGCTGCACGAAGCA...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCGGCTCTCCTGACAGATaGAAAGGTTTAGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSGSPDR*KGLGNS
Trigger: AGAATTTCCTAAACCTTTGCATCTGTCAGGAGAGCC...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTCTGCTATGGCCAGCTaGTTCTCCTCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRSAMAS*FSSASS
Trigger: GCTGGAGGCAGAGGAGAAGCAGCTGGCCATAGCAGA...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAATCCTGGCTTCGCTGCTaGAGATCTCCAACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKSWLRC*RSPTAL
Trigger: GAGGGCTGTTGGAGATCTGCAGCAGCGAAGCCAGGA...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGGAAGGCGCTGTGCTGTaGCCTCACAGCTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGEGAVL*PHSCGC
Trigger: GCATCCACAGCTGTGAGGGCACAGCACAGCGCCTTC...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGTGCTGGGTCCTCAGCTaGAGCAGCCGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLCWVLS*SSRCLC
Trigger: GCAGAGGCAGCGGCTGCTGCAGCTGAGGACCCAGCA...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGAGAAGGCCCGGGTCCTaGTCTACCTTCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRRRPGS*STFFTS
Trigger: GGAGGTGAAGAAGGTAGAGCAGGACCCGGGCCTTCT...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATATCTTCAGGGTCAGTTaGCGCAGCTCCCTCTCGGCG +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDIFRVS*RSSLSA
Trigger: CGCCGAGAGGGAGCTGCGGCAACTGACCCTGAAGAT...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGATGATGATCTTTTCCTaGAGGGCAGGGGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: LPIFGDRAQHHKRLRSEVMMIFS*RAGGRF
Trigger: GAAGCGGCCCCCTGCCCTGCAGGAAAAGATCATCAT...CACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGGCTTTCTGCTGTTTCTaGTGCTCCAGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRAFCCF*CSSSRS
Trigger: GCTGCGGGAGCTGGAGCAGCAGAAACAGCAGAAAGC...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTGCAGATGGTGTTGTAAAGCCTaGTTCTGCTCACCATTCTGC +
Preference number: 4 (lower is better)
Translates to: ITQLQGKVTCAFSLPLCRWCCKA*FCSPFC
Trigger: GCAGAATGGTGAGCAGAACCAGGCTTTACAACACCA...TCTGCAGAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCTTGAGGGCCTCCTGGTaGACCTGGATGGGCCCAATG +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCLRASW*TWMGPM
Trigger: CATTGGGCCCATCCAGGTCCACCAGGAGGCCCTCAA...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGAGCTTTGCCAGGGTCTaGCTGACTGAGTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQSFARV*LTESAS
Trigger: AGAGGCGGACTCAGTCAGCCAGACCCTGGCAAAGCT...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGCAGCTGGGGCACTTTTaGTCTCTCCTCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGQLGHF*SLLQGP
Trigger: AGGGCCCTGGAGGAGAGACCAAAAGTGCCCCAGCTG...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCCTCACACTCCTGCTaGGCTGCCTCCTTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIASHSC*AASFSA
Trigger: AGCGGAGAAGGAGGCAGCCCAGCAGGAGTGTGAGGC...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGACTCTTGCCCTCCAAGTaGACAACCTTCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRLLPSK*TTFWAT
Trigger: GGTGGCCCAGAAGGTTGTCCACTTGGAGGGCAAGAG...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGGCATCTTCCTCGATCTaGAGCCTCAGAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQASSSI*SLRVWA
Trigger: GGCCCAGACTCTGAGGCTCCAGATCGAGGAAGATGC...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTTCATCGCGTTCGCCCTaGAGCCGGATGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTISSRSP*SRMSCS
Trigger: GGAGCAGCTCATCCGGCTCCAGGGCGAACGCGATGA...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGTGGCTCGCCTCCTCTaGACAGCCTCCCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFVARLL*TASRTS
Trigger: GGAGGTGCGGGAGGCTGTCCAGAGGAGGCGAGCCAC...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGTCGCTCTCCGTCTTCTaGCTAAGCAGCCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGSLSVF*LSSLPS
Trigger: GGAGGGGAGGCTGCTTAGCCAGAAGACGGAGAGCGA...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGCCCAAAAGAGAGGCCTaGGGAGAAGAAGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: LPIFGDRAQHHKRLRSEVPKREA*GEEAGT
Trigger: AGTACCGGCTTCTTCTCCCCAGGCCTCTCTTTTGGG...CACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATCAACAATGCCTCCCGTaGCTGCCTGGGCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDQQCLP*LPGPPT
Trigger: TGTTGGAGGCCCAGGCAGCCACGGGAGGCATTGTTG...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGCTGTACCAGCAGGTaGGGAAGCACGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRCCTSR*GSTLSW
Trigger: CCAGGAAAGCGTGCTTCCCCACCTGCTGGTACAGCA...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGTGGTGTGCAGGTCCCTaGGGGTCCTCTCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGWCAGP*GSSLSR
Trigger: ACGAGAAAGAGAGGACCCTCAGGGACCTGCACACCA...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGACTGGCCTCTGTCGATaGCACCCCTCTTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGTGLCR*HPSCRP
Trigger: AGGCCTACAAGAGGGGTGTCATCGACAGAGGCCAGT...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCCTGCTGTTCCAGCTCTaGCATCCCAGGCCCATAGTG +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCLLFQL*HPRPIV
Trigger: CACTATGGGCCTGGGATGGCAGAGCTGGAACAGCAG...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATCTCTGCAGGATGTTGTaGTCGGCCACCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDLCRML*SATCCS
Trigger: GGAACAGCAGGTGGCCGAGCACAACATCCTGCAGAG...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGAGCCTCGATTTCTCTCTaGAGGATGTTGTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRASISL*RMLCSA
Trigger: GGCCGAGCACAACATCCTGCAGAGAGAAATCGAGGC...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCCTTCCAGCTGGTTTATaGTCCGCTCCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCLPAGL*SAPGPA
Trigger: TGCTGGCCCAGGAGCGGAGCATAAACCAGCTGGAAG...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTCCAACAGCCCTCTCTaGTATGGCCAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQSNSPL*YGQLLL
Trigger: GAGAAGCAGCTGGCCATAGCAGAGAGGGCTGTTGGA...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGAGTCCCAGTCACAGATaGTGTCCACGTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGSPSHR*CPRAGA
Trigger: AGCCCCTGCACGTGGACAGCATCTGTGACTGGGACT...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGACCTGCCTCTCTATCTaGCCCAGATCCCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGTCLSI*PRSPSS
Trigger: GCTGGATGGGGATCTGGGGCAGATAGAGAGGCAGGT...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGAAGCTTCTCTACCTCCTaGTCCACGCCGCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRSFSTS*STPLFL
Trigger: CAAGAAGAGCGGCGTGGAGCAGGAGGTAGAGAAGCT...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGCGGCTCACCTTGGTGTaGAGGTCCCTGAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLRLTLV*RSLRVL
Trigger: GAGGACCCTCAGGGACCTGCACACCAAGGTGAGCCG...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTCACACTCCAGCTCCTaGAGCTGGAGATACTGGCCT +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRSHSSS*SWRYWP
Trigger: AGGCCAGTATCTCCAGCTGCAGGAGCTGGAGTGTGA...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATGCCTCGATGGAGTATTaGTTCCCGCTCTTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDASMEY*FPLLRS
Trigger: GGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGC...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGAGCAGAGCCAGTTCCTaGGTTGCAGCCCGATTGTGC +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGSRASS*VAARLC
Trigger: GCACAATCGGGCTGCAACCCAGGAACTGGCTCTGCT...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAAATCTCACTGTGGAGCTaGGTAACCTGGCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKISLWS*VTWLSR
Trigger: CCTGGACAGCCAGGTTACCCAGCTCCACAGTGAGAT...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGTGCGAGCCTGTATCTTaGCAACGGTCTCCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGCEPVS*QRSPSP
Trigger: GGGCGAAGGAGACCGTTGCCAAGATACAGGCTCGCA...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGGAGGGCGGCCTCGATaGAGTATTGCTTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIGGRPR*SIASRS
Trigger: AGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCC...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCATCTTTGTACCTGTaGTACTCTTCTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLPSLYL*YSSLEM
Trigger: CATTTCCAAAGAAGAGTACCACAGGTACAAAGATGG...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGCATCCAGCCCTTCTaGATGGCCTCACCCACCGAC +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLGIQPF*MASPTD
Trigger: GTCGGTGGGTGAGGCCATCCAGAAGGGCTGGATGCC...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATGTTCTTCACACTGTTaGGGACCACGGGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRCSSHC*GPRAVA
Trigger: TGCAACTGCCCGTGGTCCTCAACAGTGTGAAGAACA...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTCTTTGGTCAGCAGGTaGGGTTGCATGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRSLVSR*GCMVFL
Trigger: GAGGAAGACCATGCAACCTCACCTGCTGACCAAAGA...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGCCCTCTCGATTTGGGTaGCCTCTTTGGTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGPSRFG*PLWSAG
Trigger: ACCTGCTGACCAAAGAGGTCACCCAAATCGAGAGGG...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGCCTGCTCCAGGTCTTTaGTGCGAGCCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGPAPGL*CEPVSW
Trigger: CCAAGATACAGGCTCGCATCAAAGACCTGGAGCAGG...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGTCACCTCCTTCACAATaGCCTTGGGCTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGSPPSQ*PWAPLS
Trigger: GCTCAGTGGAGCCCAAGGTCATTGTGAAGGAGGTGA...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTTGGAGGAGGTCGACCTaGACCTGCAGACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFWRRST*TCRPWH
Trigger: GTGCCAGGGTCTGCAGGTTCAGGTCGACCTCCTCCA...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAATGGGCCAGCAGCTCATaGTGCTTGAAGTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKWASSS*CLKCSY
Trigger: GTATGAGCACTTCAAGCAGCATGAGCTGCTGGCCCA...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGACCCTGTATTTCTCCTaGAGCTCCTGCAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRTLYFS*SSCSSL
Trigger: CAGGGAACTGCAGGAGCTGCAGGAGAAATACAGGGT...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTCCTCCTCATCCAAGCTaGGGCTCAGCCGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFPPHPS*GSAGCA
Trigger: AGCACAGCCGGCTGAGCCGCAGCTTGGATGAGGAGG...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCTTCTGCTGTTTCTGCTaGTCCAGCTCCCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCFCCFC*SSSRSC
Trigger: ACAGCTGCGGGAGCTGGAGCAGCAGAAACAGCAGAA...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGGGTCCCTCTCGATTTaGGTGACCTCTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCGSLSI*VTSLVS
Trigger: GCTGACCAAAGAGGTCACCCAAATCGAGAGGGACCC...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGAGATGCAGATCTTGGTaGAGAGGTTGGTCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIARCRSW*RGWSPG
Trigger: CCCGGGAGACCAACCTCTCCACCAAGATCTGCATCT...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATGTGAAGAACTCGGCTTaGTCTCCCCTGCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDVKNSA*SPLPQA
Trigger: TGCTTGTGGCAGGGGAGACCAAGCCGAGTTCTTCAC...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGAAGAAGCCGGTACTCTaGGGGCCTGGGGAGCAGACT +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLKKPVL*GPGEQT
Trigger: AGTCTGCTCCCCAGGCCCCCAGAGTACCGGCTTCTT...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGTCATCTTGCAGGAGCTaGCCCAGGTCTTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIASSCRS*PRSSLI
Trigger: GATCAGCGAAGACCTGGGCCAGCTCCTGCAAGATGA...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGCCAGGAAGAGATCTTTaGGGAGTACCTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGPGRDL*GVPPLP
Trigger: AGGAAGCGGAGGTACTCCTCAAAGATCTCTTCCTGG...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCCACGGTATTGGTTCCTaGTGGTGTTTGCATCCGGTC +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCHGIGS*WCLHPV
Trigger: GACCGGATGCAAACACCATCAGGAACCAATACCGTG...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCAGCTGGCTCTCCTaGCAGATGCAAAGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDCSWLS*QMQRFR
Trigger: CCTAAACCTTTGCATCTGTCAGGAGAGCCAGCTGCA...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCTGGCCACAGCTGCCTTaGTGCTACACTTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCWPQLP*CYTCCL
Trigger: CAGACAACAAGTGTAGCATCAAGGCAGCTGTGGCCA...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGGCATTGAGCAGCCGTTaGGTGGAGGTGTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGALSSR*VEVFSM
Trigger: CATTGAGAACACCTCCACTCAACGGCTGCTCAATGC...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTCGGAGGAGTCCCCAGTaGCAAAGCCGTACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIRRSPQ*QSRTWY
Trigger: ATACCAAGTACGGCTTTGGCACTGGGGACTCCTCCG...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTAACGCCTCACACTCCTaGTGGGCTGCCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFNASHS*WAASFS
Trigger: GGAGAAGGAGGCAGCCCAGCAGGAGTGTGAGGCGTT...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCTTGGATGACCCTGTCTaGCTCCTGGATCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCLDDPV*LLDLLL
Trigger: GAGAAGCAGATCCAGGAGGCAGACAGGGTCATCCAA...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGCTGCTGCTGCTCAGCTaGGGCAACCTCAGTGTAAGC +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLLLLLS*GNLSVS
Trigger: GCTTACACTGAGGTTGCCGCAGCTGAGCAGCAGCAG...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATGCACCTTGGGCTTCTaGTTTTCCACCACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRCTLGF*FSTTLY
Trigger: ATACAGGGTGGTGGAAAAGCAGAAGCCCAAGGTGCA...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATCTCCGGTTCCAAGATaGAGATCTTGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRSPVPR*RSWWRG
Trigger: ACCTCTCCACCAAGATCTGCATCTTGGAACCGGAGA...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTCGGCTTGGTCTCCCCTaGCACAAGCAGGGCAAACTC +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFRLGLP*HKQGKL
Trigger: GAGTTTGCCCTGCTTGTGGCAGGGGAGACCAAGCCG...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCCCAAGATGCAGATCTTaGTGGAGAGGTTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCPRCRS*WRGWSP
Trigger: GGGAGACCAACCTCTCCACCAAGATCTGCATCTTGG...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTTGCAGCTGGAGATACTaGCCTCTGTCGATGACACCC +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTICSWRY*PLSMTP
Trigger: GGGTGTCATCGACAGAGGCCAGTATCTCCAGCTGCA...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGATAGCCTTCTAGCATaGCGGGGAGCAGTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIDSLLA*RGAVVG
Trigger: GCCTACTACTGCTCCCCGCCATGCTAGAAGGCTATC...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGAACCCGCTCATGCAGCTaGTTGATGTCTTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRTRSCS*LMSFSI
Trigger: GATTGAGAAAGACATCAAGCAGCTGCATGAGCGGGT...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGTCATGCTGCTTGAAGTaGTCATACTCTCGCCTCACG +
Preference number: 4 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIASCCLK*SYSRLT
Trigger: CGTGAGGCGAGAGTATGAGCACTTCAAGCAGCATGA...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTTCTGCCTCCTGGATCTaGTTCTCCAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFSASWI*FSRPRA
Trigger: TGCTCTGGGCCTGGAGAAGCAGATCCAGGAGGCAGA...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCATGGTCTTCCTCTTaGCCTCCAAGTGGACAACCT +
Preference number: 4 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIAWSSS*PPSGQP
Trigger: AGGTTGTCCACTTGGAGGGCAAGAGGAAGACCATGC...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGCGTTGCATCTCACTGTaGAGCTGGGTAACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLRCISL*SWVTWL
Trigger: CAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACG...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGCTTTGCTCACCATCTTaGTCTCCACCTTGGACCTTT +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQLCSPS*SPPWTF
Trigger: AAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAG...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCTCATGCAGCTGCTTaGTGTCTTTCTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCAHAAA*CLSQSP
Trigger: AGGAGATTGAGAAAGACATCAAGCAGCTGCATGAGC...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR TCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGACCCAATGGAGAGTaGAGAACTCGGCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFGPNGE*RTRLGL
Trigger: GAGACCAAGCCGAGTTCTTCACTCTCCATTGGGTCC...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGCCGCACGACTTCTTTaGTCACCATCTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLAARLL*SPSWSP
Trigger: TGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGC...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGTTCTTGGCCACAGCTaGCTTGATGCTACACTTGTT +
Preference number: 4 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGVLGHS*LDATLV
Trigger: AACAAGTGTAGCATCAAGGCAGCTGTGGCCAAGAAC...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTCGGCCAGTCTCCTGCTaGTGTTGTAAAGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFRPVSC*CCKAWF
Trigger: GAACCAGGCTTTACAACACCAGCAGGAGACTGGCCG...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTCTTGGCAGAACTCTTaGAAATTGTTCTGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQSWQNS*KLFCSA
Trigger: TGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGA...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGTGGAGCCTCAGAGTCTaGGCCGCCTTAACCATTTCT +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLWSLRV*AALTIS
Trigger: AGAAATGGTTAAGGCGGCCCAGACTCTGAGGCTCCA...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTACACTTGTTGTCTGTaGTTGTATCGTAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRYTCCL*LYRRSP
Trigger: CGGGGATCTACGATACAACCACAGACAACAAGTGTA...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp GAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCTGTTGCAGCTTCTTCTaGGTCTCCAAAATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: EQRNFPYLGTEPNTTNDCCCSFF*VSKMSL
Trigger: AAGAGACATTTTGGAGACGCAGAAGAAGCTGCAACA...GCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR GCA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTTCTCCTGAGCCTGGATaGTCTCCTGCAAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFSPEPG*SPARKS
Trigger: TGATTTCCTTGCAGGAGAGCATCCAGGCTCAGGAGA...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CCA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGAGCAGCTCACGGTATTaGTTCCTGATGGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLSSSRY*FLMVFA
Trigger: TGCAAACACCATCAGGAACCAATACCGTGAGCTGCT...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CGGGACCAGGACCTCCTCAGAGCCTCGGCTCGGTCGATCCGCTCCTaGAAGCTCCGGACATCCTCCTCCCGGCCCTTGCGGGCTGCGCGC +
Preference number: 5 (lower is better)
Translates to: RDQDLLRASARSIRS*KLRTSSSRPLRAAR
Trigger: GCGCGCAGCCCGCAAGGGCCGGGAGGAGGATGTCCGGAGCTTGCAGGAGCGGATCGACCGAGCCGAGGCTCTGAGGAGGTCCTGGTCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CCTCCAGCTCCAGCTGCCGCCGGCGCCCCACCTCCTCATCCAAGCTaGGGCTCAGCCGGCTGTGCTCCTCGCGCAGCTTCGGGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PPAPAAAGAPPPHPS*GSAGCAPRAASGPS
Trigger: AGAAGGACCCGAAGCTGCGCGAGGAGCACAGCCGGCTGAGCCGCAGCTTGGATGAGGAGGTGGGGCGCCGGCGGCAGCTGGAGCTGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CCGCTCCTGCAAGCTCCGGACATCCTCCTCCCGGCCCTTGCGGGCTaGGCGCTCCCGGTTAAGGATCTCCCACACTCGGGCCCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: PLLQAPDILLPALAG*ALPVKDLPHSGPLA
Trigger: GGCGAGAGGGCCCGAGTGTGGGAGATCCTTAACCGGGAGCGCGCAGCCCGCAAGGGCCGGGAGGAGGATGTCCGGAGCTTGCAGGAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp GGCGGCAGCGGAGGGCGGCCTCGATGGAGTATTGCTTCCCGCTCTTaGGGTCCAGGAGCACAGACTCCTCCCCGCAGGGGCTGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GGSGGRPRWSIASRS*GPGAQTPPRRGWRL
Trigger: CAACCTCCAGCCCCTGCGGGGAGGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp TCCTGGAGAATGGCAGCCTCGAGCTGCGTGACCGCCTGGCTCCGCTaGGCGGCCTTCTGGCGCTCGCTCTCCGTCTTCTGGCTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SWRMAASSCVTAWLR*AAFWRSLSVFWLSS
Trigger: GCTGCTTAGCCAGAAGACGGAGAGCGAGCGCCAGAAGGCCGCCCAGCGGAGCCAGGCGGTCACGCAGCTCGAGGCTGCCATTCTCCAGGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp AGCAGCCTCCCCTCCTCCTGTAGCTGCCGGGCTTTCTGCTGTTTCTaGTGCTCCAGCTCCCGCAGCTGTCTCTGCAGCCGCCCGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SSLPSSCSCRAFCCF*CSSSRSCLCSRPQS
Trigger: GGACTGCGGGCGGCTGCAGAGACAGCTGCGGGAGCTGGAGCAGCAGAAACAGCAGAAAGCCCGGCAGCTACAGGAGGAGGGGAGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp GTCGGCGCCACGAGGCCGCCTTCAGCAGCTCACGGTATTGGTTCCTaGTGGTGTTTGCATCCGGTCCCACCAGCGTCCGCAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VGATRPPSAAHGIGS*WCLHPVPPASAAAA
Trigger: GGCAGCAGCTGCGGACGCTGGTGGGACCGGATGCAAACACCATCAGGAACCAATACCGTGAGCTGCTGAAGGCGGCCTCGTGGCGCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp TTGTTCTGCAGCTCGTACACAGCATCCTCCGTGGCTCGCCTCCTCTaGACAGCCTCCCGCACCTCCTGCCGGAGCCTCTCGGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LFCSSYTASSVARLL*TASRTSCRSLSASF
Trigger: GAAGGAGGCCGAGAGGCTCCGGCAGGAGGTGCGGGAGGCTGTCCAGAGGAGGCGAGCCACGGAGGATGCTGTGTACGAGCTGCAGAACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp TTGTCCTTTTCCTGGAGAATGGCAGCCTCGAGCTGCGTGACCGCCTaGCTCCGCTGGGCGGCCTTCTGGCGCTCGCTCTCCGTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSFSWRMAASSCVTA*LRWAAFWRSLSVFW
Trigger: CCAGAAGACGGAGAGCGAGCGCCAGAAGGCCGCCCAGCGGAGCCAGGCGGTCACGCAGCTCGAGGCTGCCATTCTCCAGGAAAAGGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp CCCCCAGTCAGGTGCTGTACCAGCAGGTGGGGAAGCACGCTTTCCTaGGGCATCCAGCCCTTCTGGATGGCCTCACCCACCGACAGCCTC +
Preference number: 5 (lower is better)
Translates to: PPVRCCTSRWGSTLS*GIQPFWMASPTDSL
Trigger: GAGGCTGTCGGTGGGTGAGGCCATCCAGAAGGGCTGGATGCCCCAGGAAAGCGTGCTTCCCCACCTGCTGGTACAGCACCTGACTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp TGCTGTGCCCTCACAGCTGTGGATGCGGCCCTCGAGGTCCTTCAGTaGAGAAGACTGGCTCAGTGGGCTCCGGGCCCAGCTCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: CCALTAVDAALEVLQ*RRLAQWAPGPAQHL
Trigger: CAGGTGCTGAGCTGGGCCCGGAGCCCACTGAGCCAGTCTTCTTCACTGAAGGACCTCGAGGGCCGCATCCACAGCTGTGAGGGCACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp TCTCCCTCAAATCCAGCTGGTCCCCCACAGCGTGGTAACGGTCAGTaGGGGCACGAACCTGGCGCTGCTGGCGCGGCAGGTCTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: SPSNPAGPPQRGNGQ*GHEPGAAGAAGLGR
Trigger: TCTGCCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCGTGCCCTCACTGACCGTTACCACGCTGTGGGGGACCAGCTGGATTTGAGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp GGGTTCCTGCGCTGTGGCAGTGGGGCCACCTCCTGGCTTCGCTGCTaGAGATCTCCAACAGCCCTCTCTGCTATGGCCAGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GFLRCGSGATSWLRC*RSPTALSAMASCFS
Trigger: GGAGAAGCAGCTGGCCATAGCAGAGAGGGCTGTTGGAGATCTGCAGCAGCGAAGCCAGGAGGTGGCCCCACTGCCACAGCGCAGGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp TCTTTGGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATGGAGTATTaGTTCCCGCTCTTGCGGTCCAGGAGCACAGACTCCTCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: SLEMRRQRRAASMEY*FPLLRSRSTDSSPQ
Trigger: CTGCGGGGAGGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GGCTGCTTGGATGGGTTCCTGCGCTGTGGCAGTGGGGCCACCTCCTaGCTTCGCTGCTGCAGATCTCCAACAGCCCTCTCTGCTATGGCC +
Preference number: 5 (lower is better)
Translates to: GCLDGFLRCGSGATS*LRCCRSPTALSAMA
Trigger: GGCCATAGCAGAGAGGGCTGTTGGAGATCTGCAGCAGCGAAGCCAGGAGGTGGCCCCACTGCCACAGCGCAGGAACCCATCCAAGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GATGCTGTCCACGTGCAGGGGCTGCTTGGATGGGTTCCTGCGCTGTaGCAGTGGGGCCACCTCCTGGCTTCGCTGCTGCAGATCTCCAAC +
Preference number: 5 (lower is better)
Translates to: DAVHVQGLLGWVPAL*QWGHLLASLLQISN
Trigger: GTTGGAGATCTGCAGCAGCGAAGCCAGGAGGTGGCCCCACTGCCACAGCGCAGGAACCCATCCAAGCAGCCCCTGCACGTGGACAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp ACCAGCAGGTGGGGAAGCACGCTTTCCTGGGGCATCCAGCCCTTCTaGATGGCCTCACCCACCGACAGCCTCTTCCTGGTGACAGGGTCC +
Preference number: 5 (lower is better)
Translates to: TSRWGSTLSWGIQPF*MASPTDSLFLVTGS
Trigger: GGACCCTGTCACCAGGAAGAGGCTGTCGGTGGGTGAGGCCATCCAGAAGGGCTGGATGCCCCAGGAAAGCGTGCTTCCCCACCTGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GCAGGGTGGGGGAGGCCGCGCGGTAGCAGCGATAGCCTTCTAGCATaGCGGGGAGCAGTAGTAGGCCACTTAGAGGATCTTTGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGWGRPRGSSDSLLA*RGAVVGHLEDLCGS
Trigger: GCTGCCGCAAAGATCCTCTAAGTGGCCTACTACTGCTCCCCGCCATGCTAGAAGGCTATCGCTGCTACCGCGCGGCCTCCCCCACCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CGAGGCCGCCTTCAGCAGCTCACGGTATTGGTTCCTGATGGTGTTTaGATCCGGTCCCACCAGCGTCCGCAGCTGCTGCCCGTAAGCCTC +
Preference number: 5 (lower is better)
Translates to: RGRLQQLTVLVPDGV*IRSHQRPQLLPVSL
Trigger: GAGGCTTACGGGCAGCAGCTGCGGACGCTGGTGGGACCGGATGCAAACACCATCAGGAACCAATACCGTGAGCTGCTGAAGGCGGCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp GATGGGTTCCTGCGCTGTGGCAGTGGGGCCACCTCCTGGCTTCGCTaGTGCAGATCTCCAACAGCCCTCTCTGCTATGGCCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: DGFLRCGSGATSWLR*CRSPTALSAMASCF
Trigger: GAAGCAGCTGGCCATAGCAGAGAGGGCTGTTGGAGATCTGCAGCAGCGAAGCCAGGAGGTGGCCCCACTGCCACAGCGCAGGAACCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp CGTGGCCAGCCTAGAGGCTTTGGCCACAGCTTCAGGGTCTGGTGCTaGGATGCAGAGGCAGGCAGCTGGGGCACTTTTGGTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGQPRGFGHSFRVWC*DAEAGSWGTFGLSS
Trigger: GGAGGAGAGACCAAAAGTGCCCCAGCTGCCTGCCTCTGCATCCCAGCACCAGACCCTGAAGCTGTGGCCAAAGCCTCTAGGCTGGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp AGGTCACGCTGCACCTCAGCCACCCGCTTCCTCTCTTCCTCAAGCTaGGTCTTCAGGACCTCTGACTCCGCCGTCCTTGCGTGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: RSRCTSATRFLSSSS*VFRTSDSAVLACAG
Trigger: TCCGGCACACGCAAGGACGGCGGAGTCAGAGGTCCTGAAGACCCAGCTTGAGGAAGAGAGGAAGCGGGTGGCTGAGGTGCAGCGTGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp AGGACGCCGTTCTCCCCGCGCAACCGTTGCATCTCACTGTGGAGCTaGGTAACCTGGCTGTCCAGGCCAGGGTCCCTCTCGATTTGGGTG +
Preference number: 5 (lower is better)
Translates to: RTPFSPRNRCISLWS*VTWLSRPGSLSIWV
Trigger: CACCCAAATCGAGAGGGACCCTGGCCTGGACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCGCGGGGAGAACGGCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GCTGTGAGGACGCCGTTCTCCCCGCGCAACCGTTGCATCTCACTGTaGAGCTGGGTAACCTGGCTGTCCAGGCCAGGGTCCCTCTCGATT +
Preference number: 5 (lower is better)
Translates to: AVRTPFSPRNRCISL*SWVTWLSRPGSLSI
Trigger: AATCGAGAGGGACCCTGGCCTGGACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCGCGGGGAGAACGGCGTCCTCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp ATGATGATCTTTTCCTGCAGGGCAGGGGGCCGCTTCTCCAGCTCCTaGATCTTCAGGGTCAGTTGCCGCAGCTCCCTCTCGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MMIFSCRAGGRFSSS*IFRVSCRSSLSAAS
Trigger: GCTGGCCGCCGAGAGGGAGCTGCGGCAACTGACCCTGAAGATCCAGGAGCTGGAGAAGCGGCCCCCTGCCCTGCAGGAAAAGATCATCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTCCACGCCGCTCTTCTaGCTGCCTGTCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLSTPLF*LPVSCS
Trigger: GCTGCAGGAGACAGGCAGCAAGAAGAGCGGCGTGGA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp GCTCTCCCCGAAGCAGCTGAACTTCTCCCGAGTCCCAGTCACAGATaGTGTCCACGTGCAGGGGCTGCTTGGATGGGTTCCTGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: ALPEAAELLPSPSHR*CPRAGAAWMGSCAV
Trigger: CACAGCGCAGGAACCCATCCAAGCAGCCCCTGCACGTGGACAGCATCTGTGACTGGGACTCGGGAGAAGTTCAGCTGCTTCGGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CGCTGCTGGCGCGGCAGGTCTTGGCAGAACTCTTGGAAATTGTTCTaGAGCGCACTGCACGCATGCTCAGTGGCCTTCAGCTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: RCWRGRSWQNSWKLF*SALHACSVAFSWRC
Trigger: GCACCGCCAGCTGAAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp CGGTCAGTGAGGGCACGAACCTGGCGCTGCTGGCGCGGCAGGTCTTaGCAGAACTCTTGGAAATTGTTCTGCAGCGCACTGCACGCATGC +
Preference number: 5 (lower is better)
Translates to: RSVRARTWRCWRGRS*QNSWKLFCSALHAC
Trigger: GCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCGTGCCCTCACTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp AGCAGGGCAAACTCGGAGATGGGGAGGCGGCCATCTTTGTACCTGTaGTACTCTTCTTTGGAAATGCGGCGGCAGCGGAGGGCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SRANSEMGRRPSLYL*YSSLEMRRQRRAAS
Trigger: CGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCCCCATCTCCGAGTTTGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTGCTTCGTGCAGCCTaGCAGGTGGGTGTACAGGCT +
Preference number: 5 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSLLRAA*QVGVQA
Trigger: AGCCTGTACACCCACCTGCAAGGCTGCACGAAGCAG...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCGGCGGCTTCAAAGCCTaGGATGACCCTGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLGGFKA*DDPVCL
Trigger: GAGGCAGACAGGGTCATCCAAGGCTTTGAAGCCGCC...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp TGCGGTCCAGGAGCACAGACTCCTCCCCGCAGGGGCTGGAGGTTGTaGCTTCTTCCCAGTCACACTCCAGCTCCTGCAGCTGGAGATACT +
Preference number: 5 (lower is better)
Translates to: CGPGAQTPPRRGWRL*LLPSHTPAPAAGDT
Trigger: AGTATCTCCAGCTGCAGGAGCTGGAGTGTGACTGGGAAGAAGTCACAACCTCCAGCCCCTGCGGGGAGGAGTCTGTGCTCCTGGACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp GCGGCAGGTCTTGGCAGAACTCTTGGAAATTGTTCTGCAGCGCACTaGACGCATGCTCAGTGGCCTTCAGCTGGCGGTGCAGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: AAGLGRTLGNCSAAH*THAQWPSAGGAAPA
Trigger: TGCTGGGGCTGCACCGCCAGCTGAAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp ATCTGCTCCTCGGGCCGCCTCCTCTCCAGCAGCAGTAACTTGTTCTaGAGCTCGTACACAGCATCCTCCGTGGCTCGCCTCCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: ICSSGRLLSSSSNLF*SSYTASSVARLLWT
Trigger: TGTCCAGAGGAGGCGAGCCACGGAGGATGCTGTGTACGAGCTGCAGAACAAGTTACTGCTGCTGGAGAGGAGGCGGCCCGAGGAGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GCACGAACCTGGCGCTGCTGGCGCGGCAGGTCTTGGCAGAACTCTTaGAAATTGTTCTGCAGCGCACTGCACGCATGCTCAGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: ARTWRCWRGRSWQNS*KLFCSALHACSVAF
Trigger: GAAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GGTACTCTTCTTTGGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATaGAGTATTGCTTCCCGCTCTTGCGGTCCAGGAGCACAGACTCCT +
Preference number: 5 (lower is better)
Translates to: GTLLWKCGGSGGRPR*SIASRSCGPGAQTP
Trigger: AGGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGAAGAGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCAGCCAAGAGCTCAGGTaGTCCCTGCTGTTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLSQELR*SLLFLS
Trigger: GCTCAGGAACAGCAGGGACAACCTGAGCTCTTGGCT...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCATGCGAGCCTGTATCTaGGCAACGGTCTCCTTCGCC +
Preference number: 5 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLMRACI*ATVSFA
Trigger: GGCGAAGGAGACCGTTGCCAAGATACAGGCTCGCAT...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCTCCTGCAGCTGCACCTaGGGCTTCTGCTTTTCCACC +
Preference number: 5 (lower is better)
Translates to: LPRITQLQGKVTCAFSLPSCSCT*GFCFST
Trigger: GGTGGAAAAGCAGAAGCCCAAGGTGCAGCTGCAGGA...GGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp GCCTTCAGGCGGTTCTTCTCTGTAGACAGCTTCTGCTTCAGGGTCTaGAGCTCCGTGGCCAGCCTAGAGGCTTTGGCCACAGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: AFRRFFSVDSFCFRV*SSVASLEALATASG
Trigger: CCCTGAAGCTGTGGCCAAAGCCTCTAGGCTGGCCACGGAGCTGCAGACCCTGAAGCAGAAGCTGTCTACAGAGAAGAACCGCCTGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp TCCACAGCAGCAGCCTTCAGGCGGTTCTTCTCTGTAGACAGCTTCTaGTTCAGGGTCTGCAGCTCCGTGGCCAGCCTAGAGGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: STAAAFRRFFSVDSF*FRVCSSVASLEALA
Trigger: GGCCAAAGCCTCTAGGCTGGCCACGGAGCTGCAGACCCTGAAGCAGAAGCTGTCTACAGAGAAGAACCGCCTGAAGGCTGCTGCTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp TCTTGGCAGAACTCTTGGAAATTGTTCTGCAGCGCACTGCACGCATaGTCAGTGGCCTTCAGCTGGCGGTGCAGCCCCAGCACACAGGCC +
Preference number: 5 (lower is better)
Translates to: SWQNSWKLFCSALHA*SVAFSWRCSPSTQA
Trigger: GGCCTGTGTGCTGGGGCTGCACCGCCAGCTGAAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CTTCTAGCATGGCGGGGAGCAGTAGTAGGCCACTTAGAGGATCTTTaGGGCAGCGCCCCATGGCCTCCTTGTAGCTCAGCCTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LLAWRGAVVGHLEDL*GSAPWPPCSSASPW
Trigger: CCAAGGAGAGGCTGAGCTACAAGGAGGCCATGGGGCGCTGCCGCAAAGATCCTCTAAGTGGCCTACTACTGCTCCCCGCCATGCTAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp TTCTCCCCGCGCAACCGTTGCATCTCACTGTGGAGCTGGGTAACCTaGCTGTCCAGGCCAGGGTCCCTCTCGATTTGGGTGACCTCTTTG +
Preference number: 5 (lower is better)
Translates to: FSPRNRCISLWSWVT*LSRPGSLSIWVTSL
Trigger: CAAAGAGGTCACCCAAATCGAGAGGGACCCTGGCCTGGACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCGCGGGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp TCTCGTGCCGCACGACTTCTTTGCTCACCATCTTGGTCTCCACCTTaGACCTTTCCCGCTTCCACTCATCGCGTTCGCCCTGGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: SRAARLLCSPSWSPP*TFPASTHRVRPGAG
Trigger: TCCGGCTCCAGGGCGAACGCGATGAGTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCACGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp CGGAGATGGGGAGGCGGCCATCTTTGTACCTGTGGTACTCTTCTTTaGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATGGAGTATTGCT +
Preference number: 5 (lower is better)
Translates to: RRWGGGHLCTCGTLL*KCGGSGGRPRWSIA
Trigger: AGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCCCCATCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCAGGGTCCCTCTCGATTaGGGTGACCTCTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLRVPLD*GDLFGQ
Trigger: CTGACCAAAGAGGTCACCCAAATCGAGAGGGACCCT...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GACCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCATCTTGGTCTCCACCTaGGACCTTTCCCGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: DPLPRITQLQGKVTCAFSILVST*DLSRFH
Trigger: GTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGAT...GGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp GGTTCTTCTCCTGAGCCTGGATGCTCTCCTGCAAGGAAATCACTCTaGGTCTCTTCGGGGCGGACACTGCCAAGGCGGGCTCTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: GSSPEPGCSPARKSL*VSSGRTLPRRALRS
Trigger: GCTCCTTAGAGCCCGCCTTGGCAGTGTCCGCCCCGAAGAGACTCAGAGTGATTTCCTTGCAGGAGAGCATCCAGGCTCAGGAGAAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GCCGTCCTTGCGTGTGCCGGACTCCCAGATCCCTGTCTCGCGCTGTaGATGGCTTGGATGTCCTCATCAAGTTCCTTCTTCCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: AVLACAGLPDPCLAL*MAWMSSSSSFFLSI
Trigger: GATGCTCAGGAAGAAGGAACTTGATGAGGACATCCAAGCCATCCACAGCGCGAGACAGGGATCTGGGAGTCCGGCACACGCAAGGACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GCACCGGATCCTTCTCGTGCCGCACGACTTCTTTGCTCACCATCTTaGTCTCCACCTTGGACCTTTCCCGCTTCCACTCATCGCGTTCGC +
Preference number: 5 (lower is better)
Translates to: APDPSRAARLLCSPS*SPPWTFPASTHRVR
Trigger: GCGAACGCGATGAGTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCACGAGAAGGATCCGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCTCCTTCACAATGACCTaGGGCTCCACTGAGCTGATC +
Preference number: 5 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLSFTMT*GSTELI
Trigger: GATCAGCTCAGTGGAGCCCAAGGTCATTGTGAAGGA...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp CTCCAGGGCCCTGAACCAGCCACGTGTATGGGTCAGCATTATCCTTaGGTGTGTACCGCTCTCCCCGAAGCAGCTGAACTTCTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: LQGPEPATCMGQHYP*VCTALPEAAELLPS
Trigger: ACTCGGGAGAAGTTCAGCTGCTTCGGGGAGAGCGGTACACACTCAAGGATAATGCTGACCCATACACGTGGCTGGTTCAGGGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp CAGAGGCAGGCAGCTGGGGCACTTTTGGTCTCTCCTCCAGGGCCCTaGACCAGCCACGTGTATGGGTCAGCATTATCCTTGAGTGTGTAC +
Preference number: 5 (lower is better)
Translates to: QRQAAGALLVSPPGP*TSHVYGSALSLSVY
Trigger: GTACACACTCAAGGATAATGCTGACCCATACACGTGGCTGGTTCAGGGCCCTGGAGGAGAGACCAAAAGTGCCCCAGCTGCCTGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp TTCTCTCTGCAGGATGTTGTGCTCGGCCACCTGCTGTTCCAGCTCTaGCATCCCAGGCCCATAGTGGCCCTCACGGACCAGATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: FSLQDVVLGHLLFQL*HPRPIVALTDQILF
Trigger: AAACAGAATCTGGTCCGTGAGGGCCACTATGGGCCTGGGATGGCAGAGCTGGAACAGCAGGTGGCCGAGCACAACATCCTGCAGAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CTGGTCCTGCTCGCGCCCCAGGATTTCTTGTATCAGTCTCTTCTGTaGTTGCAGCTTGTAGGAAATCTGGCTTGGCCCGTCGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LVLLAPQDFLYQSLL*LQLVGNLAWPVAGL
Trigger: CAGCCCAGCGACGGGCCAAGCCAGATTTCCTACAAGCTGCAAGCACAGAAGAGACTGATACAAGAAATCCTGGGGCGCGAGCAGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp ACGGTCTCCTTCGCCCCCTTCCTCCGTGCAGCATCTTCCTCGATCTaGAGCCTCAGAGTCTGGGCCGCCTTAACCATTTCTAGATCCTTC +
Preference number: 5 (lower is better)
Translates to: TVSFAPFLRAASSSI*SLRVWAALTISRSF
Trigger: GAAGGATCTAGAAATGGTTAAGGCGGCCCAGACTCTGAGGCTCCAGATCGAGGAAGATGCTGCACGGAGGAAGGGGGCGAAGGAGACCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCGCTCATGCAGCTGCTaGATGTCTTTCTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: PLPRITQLQGKVTCAFSLRSCSC*MSFSIS
Trigger: GGAGATTGAGAAAGACATCAAGCAGCTGCATGAGCG...GAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGAAACGCACACAGGATCTaGGCAGGGTGGGGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRNAHRI*AGWGRP
Trigger: CGGCCTCCCCCACCCTGCCAAGATCCTGTGTGCGTT...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp AGGCCAGGGTCCCTCTCGATTTGGGTGACCTCTTTGGTCAGCAGGTaGGGTTGCATGGTCTTCCTCTTGCCCTCCAAGTGGACAACCTTC +
Preference number: 5 (lower is better)
Translates to: RPGSLSIWVTSLVSR*GCMVFLLPSKWTTF
Trigger: GAAGGTTGTCCACTTGGAGGGCAAGAGGAAGACCATGCAACCTCACCTGCTGACCAAAGAGGTCACCCAAATCGAGAGGGACCCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp TATATGGTCTTCTCCTGTGATTTAGTTTTCTGGAGGAGGTCGACCTaGACCTGCAGACCCTGGCACTCCCGGTGCAGCTCGGTCACGCGG +
Preference number: 5 (lower is better)
Translates to: YMVFSCDLVFWRRST*TCRPWHSRCSSVTR
Trigger: CCGCGTGACCGAGCTGCACCGGGAGTGCCAGGGTCTGCAGGTTCAGGTCGACCTCCTCCAGAAAACTAAATCACAGGAGAAGACCATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp AGTCACACTCCAGCTCCTGCAGCTGGAGATACTGGCCTCTGTCGATaGCACCCCTCTTGTAGGCCTCGTAAGGAGACATGTCATTGCCGG +
Preference number: 5 (lower is better)
Translates to: SHTPAPAAGDTGLCR*HPSCRPRKETCHCR
Trigger: CCGGCAATGACATGTCTCCTTACGAGGCCTACAAGAGGGGTGTCATCGACAGAGGCCAGTATCTCCAGCTGCAGGAGCTGGAGTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GCTTTTCCACCACCCTGTATTTCTCCTGCAGCTCCTGCAGTTCCCTaGCCAACGCGACGTTGTTGTTCTTCTCCTCCTCCAGGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: AFPPPCISPAAPAVP*PTRRCCSSPPPGGF
Trigger: GAAGCCTCCTGGAGGAGGAGAAGAACAACAACGTCGCGTTGGCCAGGGAACTGCAGGAGCTGCAGGAGAAATACAGGGTGGTGGAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp TACCGTTCTCGGCTAAGAAGGTCAACAATGCCTCCCGTGGCTGCCTaGGCCTCCAACAGCTTCTGCCCAGTGATAGGATCCAGCATGTTC +
Preference number: 5 (lower is better)
Translates to: YRSRLRRSTMPPVAA*ASNSFCPVIGSSMF
Trigger: GAACATGCTGGATCCTATCACTGGGCAGAAGCTGTTGGAGGCCCAGGCAGCCACGGGAGGCATTGTTGACCTTCTTAGCCGAGAACGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTGGTAGTCCTCCACCCGTaGCAGCTGGCTCTCCTGACA +
Preference number: 5 (lower is better)
Translates to: LPIFGDRAQHHKRLRSEVVVLHP*QLALLT
Trigger: TGTCAGGAGAGCCAGCTGCAACGGGTGGAGGACTAC...CACCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATCGGCGGCCAGCTTCTaGCTGCGATCCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRSAASF*LRSSSK
Trigger: CTTCGAGGAGGATCGCAGCAAGAAGCTGGCCGCCGA...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGGATCTTCAGGGTCAGTaGCCGCAGCTCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQDLQGQ*PQLPLG
Trigger: GCCGAGAGGGAGCTGCGGCAACTGACCCTGAAGATC...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTCCCCCTCGCCTTGATGCTACACTaGTTGTCTGTGGTTGTATCG +
Preference number: 5 (lower is better)
Translates to: PRITQLQGKVTCAFSLPLALMLH*LSVVVS
Trigger: CGATACAACCACAGACAACAAGTGTAGCATCAAGGC...GAGGGGGAGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGATGCGTCCCGTCCTCTaGGGGTCGATGAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: HLLEARGGEEQRNFPYLGMRPVL*GSMRPP
Trigger: TGGGGGCCTCATCGACCCCAAGAGGACGGGACGCAT...CCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CATCTTTTTAGCAAACTCCAGCTGGCGCAGCTGCTGCTGCTCAGCTaGGGCAACCTCAGTGTAAGCCTTCGCAAGGTTCTTCTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: HLFSKLQLAQLLLLS*GNLSVSLRKVLLLS
Trigger: GCTCAGGAGAAGAACCTTGCGAAGGCTTACACTGAGGTTGCCGCAGCTGAGCAGCAGCAGCTGCGCCAGCTGGAGTTTGCTAAAAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp TTCACCTCCTTCACAATGACCTTGGGCTCCACTGAGCTGATCGCCTaGTCCAGGTCTTTGATGCGAGCCTGTATCTTGGCAACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: FTSFTMTLGSTELIA*SRSLMRACILATVS
Trigger: GGAGACCGTTGCCAAGATACAGGCTCGCATCAAAGACCTGGAGCAGGCGATCAGCTCAGTGGAGCCCAAGGTCATTGTGAAGGAGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp AACTCGGCTTGGTCTCCCCTGCCACAAGCAGGGCAAACTCGGAGATaGGGAGGCGGCCATCTTTGTACCTGTGGTACTCTTCTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: NSAWSPLPQAGQTRR*GGGHLCTCGTLLWK
Trigger: TTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCCCCATCTCCGAGTTTGCCCTGCTTGTGGCAGGGGAGACCAAGCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAATGTAGGAAATCTGGCTaGGCCCGTCGCTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKCRKSG*ARRWAA
Trigger: TGCAGCCCAGCGACGGGCCAAGCCAGATTTCCTACA...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCCGCTGCCTCGGATTACGCAGCTCCAGGGCAAGGTGACGTGTGCATTCTCCCTGGATCTTTCTCTAACTaGACCACTTCCTCCATGATG +
Preference number: 5 (lower is better)
Translates to: PAASDYAAPGQGDVCILPGSFSN*TTSSMM
Trigger: CATCATGGAGGAAGTGGTCAAGTTAGAGAAAGATCC...AGGGAGAATGCACACGTCACCTTGCCCTGGAGCTGCGTAATCCGAGGCAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp ACATCATTGTATCTGTTCTTCACACTGTTGAGGACCACGGGCAGTTaGAGGGCAGCGGAGCCCGTAGGCTTGGTAGACAGAAACGCCTCA +
Preference number: 5 (lower is better)
Translates to: TSLYLFFTLLRTTGS*RAAEPVGLVDRNAS
Trigger: TGAGGCGTTTCTGTCTACCAAGCCTACGGGCTCCGCTGCCCTGCAACTGCCCGTGGTCCTCAACAGTGTGAAGAACAGATACAATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 90 bp GCGTGTGCCGGACTCCCAGATCCCTGTCTCGCGCTGTGGATGGCTTaGATGTCCTCATCAAGTTCCTTCTTCCTGAGCATCTTTTTAGCA +
Preference number: 5 (lower is better)
Translates to: ACAGLPDPCLALWMA*MSSSSSFFLSIFLA
Trigger: TGCTAAAAAGATGCTCAGGAAGAAGGAACTTGATGAGGACATCCAAGCCATCCACAGCGCGAGACAGGGATCTGGGAGTCCGGCACACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTACGTGCAGGGGCTGCTaGGATGGGTTCCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTITCRGC*DGFLRC
Trigger: ACAGCGCAGGAACCCATCCAAGCAGCCCCTGCACGT...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp TGGGGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAAGGTCAGCAGGTGAGGTaGCATGGTCTTCCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: WGGTTELPIFGDRAQHHKGQQVR*HGLPLA
Trigger: GGCAAGAGGAAGACCATGCAACCTCACCTGCTGACC...TTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGTCTGGGTCTCCTGGTaGAGCTCCTCCCGGCTCACC +
Preference number: 5 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLVWVSW*SSSRLT
Trigger: GGTGAGCCGGGAGGAGCTCAACCAGGAGACCCAGAC...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGGGCCTCGATGGAGTATaGCTTCCCGCTCTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIAGLDGV*LPALAV
Trigger: GACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCC...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGTCTCTCTGCAGGATGTaGTGCTCGGCCACCTGCTGT +
Preference number: 5 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGSLCRM*CSATCC
Trigger: ACAGCAGGTGGCCGAGCACAACATCCTGCAGAGAGA...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGCGCGCTGTGGATGGCTaGGATGTCCTCATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQRAVDG*DVLIKF
Trigger: GAACTTGATGAGGACATCCAAGCCATCCACAGCGCG...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGGCCAACGCGACGTTGTaGTTCTTCTCCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGANATL*FFSSSR
Trigger: CCTGGAGGAGGAGAAGAACAACAACGTCGCGTTGGC...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTATCTTGGTGGAGAGGTaGGTCTCCCGGGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIILVER*VSRVWV
Trigger: GACCCAGACCCGGGAGACCAACCTCTCCACCAAGAT...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGCAGCAGCTCACGGTATaGGTTCCTGATGGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRQQLTV*VPDGVC
Trigger: GCAAACACCATCAGGAACCAATACCGTGAGCTGCTG...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGAAGCAGCTCATGCTGCTaGAAGTGCTCATACTCTCGC +
Preference number: 5 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRSSSCC*KCSYSR
Trigger: GCGAGAGTATGAGCACTTCAAGCAGCATGAGCTGCT...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATACTTGGTATCCAGGTaGGAGCTGAGCTTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GGTTELPIFGDRAQHHKRYLVSR*ELSFAR
Trigger: CCTGGCAAAGCTCAGCTCCAACCTGGATACCAAGTA...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp ATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGCCAGCCTAGAGGCTTaGGCCACAGCTTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: IHLLEARGGEEQRNFPYLASLEA*ATASGS
Trigger: AGACCCTGAAGCTGTGGCCAAAGCCTCTAGGCTGGC...CAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGGCGCCCCAGGATTTCTaGTATCAGTCTCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQAPQDF*YQSLLC
Trigger: GCACAGAAGAGACTGATACAAGAAATCCTGGGGCGC...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTTATTGCTTCCCGCTCTaGCGGTCCAGGAGCACAGAC +
Preference number: 5 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTIYCFPL*RSRSTD
Trigger: GTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATA...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GGAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGAGAGCAGACTGGAGACTaGGAGATGATGGACCCAATG +
Preference number: 5 (lower is better)
Translates to: GGTTELPIFGDRAQHHKREQTGD*EMMDPM
Trigger: CATTGGGTCCATCATCTCCAAGTCTCCAGTCTGCTC...TCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGGGATCCAGCATGTTCTaGGCCACAGCTGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIAGSSMF*ATAALM
Trigger: CATCAAGGCAGCTGTGGCCAAGAACATGCTGGATCC...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 90 bp CAGCTTCTGCCCAGTGATAGGATCCAGCATGTTCTTGGCCACAGCTaGCTTGATGCTACACTTGTTGTCTGTGGTTGTATCGTAGATCCC +
Preference number: 5 (lower is better)
Translates to: QLLPSDRIQHVLGHS*LDATLVVCGCIVDP
Trigger: GGGATCTACGATACAACCACAGACAACAAGTGTAGCATCAAGGCAGCTGTGGCCAAGAACATGCTGGATCCTATCACTGGGCAGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTCTGTTCTTCACACTGTaGAGGACCACGGGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTILFFTL*RTTGSC
Trigger: GCAACTGCCCGTGGTCCTCAACAGTGTGAAGAACAG...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTTGCCGCACGACTTCTTaGCTCACCATCTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTICRTTS*LTILVS
Trigger: GGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCA...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTGAGGTCCAGCAGCAGTAACTaGTTCTGCAGCTCGTACACA +
Preference number: 5 (lower is better)
Translates to: NFPYLGTEPNTTNDCAVRSSSSN*FCSSYT
Trigger: TGTGTACGAGCTGCAGAACAAGTTACTGCTGCTGGA...CCTCACTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTCCAAGATGCAGATCTaGGTGGAGAGGTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDSKMQI*VERLVS
Trigger: GGAGACCAACCTCTCCACCAAGATCTGCATCTTGGA...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGCAGTTGGCCACAGCTGCCTaGATGCTACACTTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: NGTSHIWGQSPTPQTIAQLATAA*MLHLLS
Trigger: AGACAACAAGTGTAGCATCAAGGCAGCTGTGGCCAA...CTGCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 90 bp GTCCTTCTCGACCCTGATCACTTCCTTGTATATGGTCTTCTCCTGTaGTTTAGTTTTCTGGAGGAGGTCGACCTGAACCTGCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: VLLDPDHFLVYGLLL*FSFLEEVDLNLQTL
Trigger: CAGGGTCTGCAGGTTCAGGTCGACCTCCTCCAGAAAACTAAATCACAGGAGAAGACCATATACAAGGAAGTGATCAGGGTCGAGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp GAGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATACTTGTTGTCTGTGGTaGTATCGTAGATCCCCGCGA +
Preference number: 5 (lower is better)
Translates to: EEQRNFPYLGTEPNTTNDTCCLW*YRRSPR
Trigger: TCGCGGGGATCTACGATACAACCACAGACAACAAGT...ATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp CCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGGGCAGTCTCTTCTGTGCTaGCAGCTTGTAGGAAATCTG +
Preference number: 5 (lower is better)
Translates to: PFIRSTGWGGTTELPIFGQSLLC*QLVGNL
Trigger: CAGATTTCCTACAAGCTGCAAGCACAGAAGAGACTG...CCCAAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AATCCATTTATTAGAAGCACGGGGTGGGGAGGAACAACGGAACTTCCCATATTTGCGGTAGGTATCTGCTaGCAGCTCATAGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: NPFIRSTGWGGTTELPIFAVGIC*QLIVLE
Trigger: CTCCAGGACTATGAGCTGCAAGCAGATACCTACCGC...AAATATGGGAAGTTCCGTTGTTCCTCCCCACCCCGTGCTTCTAATAAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AGGAACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTAGCATTGAGCAGCCGTaGAGTGGAGGTGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: RNNGTSHIWGQSPTPQTISIEQP*SGGVLN
Trigger: ATTGAGAACACCTCCACTCAACGGCTGCTCAATGCT...AATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS-3UTR CAA 90 bp AACAACGGAACTTCCCATATTTGGGGACAGAGCCCAACACCACAAACGATTGCGACCCTGATCACTTCCTaGTATATGGTCTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: NNGTSHIWGQSPTPQTIATLITS*YMVFSC
Trigger: ACAGGAGAAGACCATATACAAGGAAGTGATCAGGGT...CGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CCAGCTGCCGCCGGCGCCCCACCTCCTCATCCAAGCTaGGGCTCAGCCGGCTGTGCTCCTCGCGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: PAAAGAPPPHPS*GSAGCAPRAAS
Trigger: CGAAGCTGCGCGAGGAGCACAGCCGGCTGAGCCGCAGCTTGGATGAGGAGGTGGGGCGCCGGCGGCAGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp GCTCCAGCTCCCGCAGCTGTCTCTGCAGCCGCCCGCAGTCCTGGCTaGCCTGGTCCCGGGCCCTCTGGAGCTCAGCTTCCTCGCGGGACC +
Preference number: 6 (lower is better)
Translates to: APAPAAVSAAARSPG*PGPGPSGAQLPRGT
Trigger: GGTCCCGCGAGGAAGCTGAGCTCCAGAGGGCCCGGGACCAGGCAAGCCAGGACTGCGGGCGGCTGCAGAGACAGCTGCGGGAGCTGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp GCTCATAGTCCTGGAGGGCCTCCTGCAGGTCCCGGGTaGGGCGGGACACGGTGGCCTGGTCCTGCTCGCGCC +
Preference number: 6 (lower is better)
Translates to: AHSPGGPPAGPG*GGTRWPGPARA
Trigger: GGCGCGAGCAGGACCAGGCCACCGTGTCCCGCCTCACCCGGGACCTGCAGGAGGCCCTCCAGGACTATGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp AGCTCCCGCAGCTGTCTCTGCAGCCGCCCGCAGTCCTaGCTTGCCTGGTCCCGGGCCCTCTGGAGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SSRSCLCSRPQS*LAWSRALWSSA
Trigger: AGCTGAGCTCCAGAGGGCCCGGGACCAGGCAAGCCAGGACTGCGGGCGGCTGCAGAGACAGCTGCGGGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TCCTGGAGAATGGCAGCCTCGAGCTGCGTGACCGCCTaGCTCCGCTGGGCGGCCTTCTGGCGCTCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SWRMAASSCVTA*LRWAAFWRSLS
Trigger: GGAGAGCGAGCGCCAGAAGGCCGCCCAGCGGAGCCAGGCGGTCACGCAGCTCGAGGCTGCCATTCTCCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CGGTCGATCCGCTCCTGCAAGCTCCGGACATCCTCCTCCCGGCCCTaGCGGGCTGCGCGCTCCCGGTTAAGGATCTCCCACACTCGGGCC +
Preference number: 6 (lower is better)
Translates to: RSIRSCKLRTSSSRP*RAARSRLRISHTRA
Trigger: GGCCCGAGTGTGGGAGATCCTTAACCGGGAGCGCGCAGCCCGCAAGGGCCGGGAGGAGGATGTCCGGAGCTTGCAGGAGCGGATCGACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CGGCGGCAGCGGAGGGCGGCCTCGATGGAGTATTGCTTCCCGCTCTaGCGGTCCAGGAGCACAGACTCCTCCCCGCAGGGGCTGGAGGTT +
Preference number: 6 (lower is better)
Translates to: RRQRRAASMEYCFPL*RSRSTDSSPQGLEV
Trigger: AACCTCCAGCCCCTGCGGGGAGGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CAAGCTCCGGACATCCTCCTCCCGGCCCTTGCGGGCTaGGCGCTCCCGGTTAAGGATCTCCCACACTCGGGC +
Preference number: 6 (lower is better)
Translates to: QAPDILLPALAG*ALPVKDLPHSG
Trigger: GCCCGAGTGTGGGAGATCCTTAACCGGGAGCGCGCAGCCCGCAAGGGCCGGGAGGAGGATGTCCGGAGCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp GACCTCCTCAGAGCCTCGGCTCGGTCGATCCGCTCCTaGAAGCTCCGGACATCCTCCTCCCGGCCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: DLLRASARSIRS*KLRTSSSRPLR
Trigger: CCGCAAGGGCCGGGAGGAGGATGTCCGGAGCTTGCAGGAGCGGATCGACCGAGCCGAGGCTCTGAGGAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp AGCTGCGTGACCGCCTGGCTCCGCTGGGCGGCCTTCTaGCGCTCGCTCTCCGTCTTCTGGCTAAGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SCVTAWLRWAAF*RSLSVFWLSSL
Trigger: GAGGCTGCTTAGCCAGAAGACGGAGAGCGAGCGCCAGAAGGCCGCCCAGCGGAGCCAGGCGGTCACGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CCTTGTGGGTCAGCGGGGGCTGAGCCTGCCGGAGCCTaGTGGCCAGGCTGTAAGTGTTCCACAGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: PCGSAGAEPAGA*WPGCKCSTAAA
Trigger: GGCTGCTGCTGTGGAACACTTACAGCCTGGCCAGCAGGCTCCGGCAGGCTCAGCCCCCGCTGACCCACAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TGCTGTTTCTGCTGCTCCAGCTCCCGCAGCTGTCTCTaGAGCCGCCCGCAGTCCTGGCTTGCCTGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: CCFCCSSSRSCL*SRPQSWLAWSR
Trigger: CCGGGACCAGGCAAGCCAGGACTGCGGGCGGCTGCAGAGACAGCTGCGGGAGCTGGAGCAGCAGAAACAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp GGAGGGCGGCCTCGATGGAGTATTGCTTCCCGCTCTTaGGGTCCAGGAGCACAGACTCCTCCCCGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GGRPRWSIASRS*GPGAQTPPRRG
Trigger: GCCCCTGCGGGGAGGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp AGCTCGTACACAGCATCCTCCGTGGCTCGCCTCCTCTaGACAGCCTCCCGCACCTCCTGCCGGAGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: SSYTASSVARLL*TASRTSCRSLS
Trigger: CGAGAGGCTCCGGCAGGAGGTGCGGGAGGCTGTCCAGAGGAGGCGAGCCACGGAGGATGCTGTGTACGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp CGGAGGGCGGCCTCGATGGAGTATTGCTTCCCGCTCTaGCGGTCCAGGAGCACAGACTCCTCCCCGCAGGGG +
Preference number: 6 (lower is better)
Translates to: RRAASMEYCFPL*RSRSTDSSPQG
Trigger: CCCCTGCGGGGAGGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp AATCCAGCTGGTCCCCCACAGCGTGGTAACGGTCAGTaGGGGCACGAACCTGGCGCTGCTGGCGCGGCAGGT +
Preference number: 6 (lower is better)
Translates to: NPAGPPQRGNGQ*GHEPGAAGAAG
Trigger: ACCTGCCGCGCCAGCAGCGCCAGGTTCGTGCCCTCACTGACCGTTACCACGCTGTGGGGGACCAGCTGGATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp ATGCGGCGGCAGCGGAGGGCGGCCTCGATGGAGTATTaGTTCCCGCTCTTGCGGTCCAGGAGCACAGACTCC +
Preference number: 6 (lower is better)
Translates to: MRRQRRAASMEY*FPLLRSRSTDS
Trigger: GGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GTCAGTTGCCGCAGCTCCCTCTCGGCGGCCAGCTTCTaGCTGCGATCCTCCTCGAAGCTGAGCCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: VSCRSSLSAASF*LRSSSKLSLAS
Trigger: GGAGGCCAGGCTCAGCTTCGAGGAGGATCGCAGCAAGAAGCTGGCCGCCGAGAGGGAGCTGCGGCAACTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp TCCCCATCCAGCTGGGTCATCTGTGACAGGAGCGTCTaGCCTTGTGGGTCAGCGGGGGCTGAGCCTGCCGGA +
Preference number: 6 (lower is better)
Translates to: SPSSWVICDRSV*PCGSAGAEPAG
Trigger: TCCGGCAGGCTCAGCCCCCGCTGACCCACAAGGTCAGACGCTCCTGTCACAGATGACCCAGCTGGATGGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp TGGAGAGGTTGGTCTCCCGGGTCTGGGTCTCCTGGTTaGGCTCCTCCCGGCTCACCTTGGTGTGCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: WRGWSPGSGSPG*APPGSPWCAGP
Trigger: GGGACCTGCACACCAAGGTGAGCCGGGAGGAGCTCAACCAGGAGACCCAGACCCGGGAGACCAACCTCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TGCCTCCTTCTCCGCTCCCAGACTCTGAAGGCGCTGTaGTGTGCCCTCACAGCTGTGGATGCGGCCCTCGAG +
Preference number: 6 (lower is better)
Translates to: CLLLRSQTLKAL*CALTAVDAALE
Trigger: CTCGAGGGCCGCATCCACAGCTGTGAGGGCACAGCACAGCGCCTTCAGAGTCTGGGAGCGGAGAAGGAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CCCTCCTCCTGTAGCTGCCGGGCTTTCTGCTGTTTCTaGTGCTCCAGCTCCCGCAGCTGTCTCTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: PSSCSCRAFCCF*CSSSRSCLCSR
Trigger: GCGGCTGCAGAGACAGCTGCGGGAGCTGGAGCAGCAGAAACAGCAGAAAGCCCGGCAGCTACAGGAGGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp CCCAGTCACAGATGCTGTCCACGTGCAGGGGCTGCTTaGATGGGTTCCTGCGCTGTGGCAGTGGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: PSHRCCPRAGAA*MGSCAVAVGPP
Trigger: AGGTGGCCCCACTGCCACAGCGCAGGAACCCATCCAAGCAGCCCCTGCACGTGGACAGCATCTGTGACTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TCCTGCAGGTCCCGGGTGAGGCGGGACACGGTGGCCTaGTCCTGCTCGCGCCCCAGGATTTCTTGTATCAGT +
Preference number: 6 (lower is better)
Translates to: SCRSRVRRDTVA*SCSRPRISCIS
Trigger: ACTGATACAAGAAATCCTGGGGCGCGAGCAGGACCAGGCCACCGTGTCCCGCCTCACCCGGGACCTGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp ACGCCGTTCTCCCCGCGCAACCGTTGCATCTCACTGTaGAGCTGGGTAACCTGGCTGTCCAGGCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: TPFSPRNRCISL*SWVTWLSRPGS
Trigger: GGACCCTGGCCTGGACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCGCGGGGAGAACGGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp TCCCAGTCACAGATGCTGTCCACGTGCAGGGGCTGCTaGGATGGGTTCCTGCGCTGTGGCAGTGGGGCCACC +
Preference number: 6 (lower is better)
Translates to: SQSQMLSTCRGC*DGFLRCGSGAT
Trigger: GGTGGCCCCACTGCCACAGCGCAGGAACCCATCCAAGCAGCCCCTGCACGTGGACAGCATCTGTGACTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GTGGAGAGGTTGGTCTCCCGGGTCTGGGTCTCCTGGTaGAGCTCCTCCCGGCTCACCTTGGTGTGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: VERLVSRVWVSW*SSSRLTLVCRS
Trigger: GGACCTGCACACCAAGGTGAGCCGGGAGGAGCTCAACCAGGAGACCCAGACCCGGGAGACCAACCTCTCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp AATGCGGCGGCAGCGGAGGGCGGCCTCGATGGAGTATaGCTTCCCGCTCTTGCGGTCCAGGAGCACAGACTC +
Preference number: 6 (lower is better)
Translates to: NAAAAEGGLDGV*LPALAVQEHRL
Trigger: GAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp CACTCCCGGTGCAGCTCGGTCACGCGGTTCTTCTCCTaGTCCAGCTCGCGCCGCAGAGCTTCTGTAGACCTC +
Preference number: 6 (lower is better)
Translates to: HSRCSSVTRFFS*SSSRRRASVDL
Trigger: GAGGTCTACAGAAGCTCTGCGGCGCGAGCTGGATCAGGAGAAGAACCGCGTGACCGAGCTGCACCGGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp AGGTCCCGGGTGAGGCGGGACACGGTGGCCTGGTCCTaGTCGCGCCCCAGGATTTCTTGTATCAGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: RSRVRRDTVAWS*SRPRISCISLF
Trigger: GAAGAGACTGATACAAGAAATCCTGGGGCGCGAGCAGGACCAGGCCACCGTGTCCCGCCTCACCCGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CTGGCTGTGAGGACGCCGTTCTCCCCGCGCAACCGTTaGATCTCACTGTGGAGCTGGGTAACCTGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LAVRTPFSPRNR*ISLWSWVTWLS
Trigger: GGACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCGCGGGGAGAACGGCGTCCTCACAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp ATCTTGTCCTTTTCCTGGAGAATGGCAGCCTCGAGCTaGGTGACCGCCTGGCTCCGCTGGGCGGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: ILSFSWRMAASS*VTAWLRWAAFW
Trigger: CCAGAAGGCCGCCCAGCGGAGCCAGGCGGTCACGCAGCTCGAGGCTGCCATTCTCCAGGAAAAGGACAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TTCTCCCCGCGCAACCGTTGCATCTCACTGTGGAGCTaGGTAACCTGGCTGTCCAGGCCAGGGTCCCTCTCG +
Preference number: 6 (lower is better)
Translates to: FSPRNRCISLWS*VTWLSRPGSLS
Trigger: CGAGAGGGACCCTGGCCTGGACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCGCGGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TTGGTGGAGAGGTTGGTCTCCCGGGTCTGGGTCTCCTaGTTGAGCTCCTCCCGGCTCACCTTGGTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: LVERLVSRVWVS*LSSSRLTLVCR
Trigger: CCTGCACACCAAGGTGAGCCGGGAGGAGCTCAACCAGGAGACCCAGACCCGGGAGACCAACCTCTCCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp CTTTGGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATaGAGTATTGCTTCCCGCTCTTGCGGTCCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: LWKCGGSGGRPR*SIASRSCGPGA
Trigger: TGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TGGGGAAGCACGCTTTCCTGGGGCATCCAGCCCTTCTaGATGGCCTCACCCACCGACAGCCTCTTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: WGSTLSWGIQPF*MASPTDSLFLV
Trigger: CACCAGGAAGAGGCTGTCGGTGGGTGAGGCCATCCAGAAGGGCTGGATGCCCCAGGAAAGCGTGCTTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TCGATGAGGCCCCCAGTCAGGTGCTGTACCAGCAGGTaGGGAAGCACGCTTTCCTGGGGCATCCAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: SMRPPVRCCTSR*GSTLSWGIQPF
Trigger: GAAGGGCTGGATGCCCCAGGAAAGCGTGCTTCCCCACCTGCTGGTACAGCACCTGACTGGGGGCCTCATCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp CCTGGCTGTGAGGACGCCGTTCTCCCCGCGCAACCGTaGCATCTCACTGTGGAGCTGGGTAACCTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: PGCEDAVLPAQP*HLTVELGNLAV
Trigger: GACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCGCGGGGAGAACGGCGTCCTCACAGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CTGTTGAGGACCACGGGCAGTTGCAGGGCAGCGGAGCCCGTAGGCTaGGTAGACAGAAACGCCTCACACTCCTGCTGGGCTGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LLRTTGSCRAAEPVG*VDRNASHSCWAASF
Trigger: GAAGGAGGCAGCCCAGCAGGAGTGTGAGGCGTTTCTGTCTACCAAGCCTACGGGCTCCGCTGCCCTGCAACTGCCCGTGGTCCTCAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp ATCTTCAGGGTCAGTTGCCGCAGCTCCCTCTCGGCGGCCAGCTTCTaGCTGCGATCCTCCTCGAAGCTGAGCCTGGCCTCCTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: IFRVSCRSSLSAASF*LRSSSKLSLASSSS
Trigger: TGAGGAGGAGGAGGCCAGGCTCAGCTTCGAGGAGGATCGCAGCAAGAAGCTGGCCGCCGAGAGGGAGCTGCGGCAACTGACCCTGAAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp TTCTTTGGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATGGAGTATaGCTTCCCGCTCTTGCGGTCCAGGAGCACAGACTCCTCCCCGCA +
Preference number: 6 (lower is better)
Translates to: FFGNAAAAEGGLDGV*LPALAVQEHRLLPA
Trigger: TGCGGGGAGGAGTCTGTGCTCCTGGACCGCAAGAGCGGGAAGCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp TCATCGCGTTCGCCCTGGAGCCGGATGAGCTGCTCCTaGGAGCGCCCGTTGGTGTTGACCAGTTCGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SSRSPWSRMSCS*ERPLVLTSSLS
Trigger: GCTCAACGAACTGGTCAACACCAACGGGCGCTCTCAGGAGCAGCTCATCCGGCTCCAGGGCGAACGCGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp GGAGCACAGACTCCTCCCCGCAGGGGCTGGAGGTTGTaGCTTCTTCCCAGTCACACTCCAGCTCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: GAQTPPRRGWRL*LLPSHTPAPAA
Trigger: AGCTGCAGGAGCTGGAGTGTGACTGGGAAGAAGTCACAACCTCCAGCCCCTGCGGGGAGGAGTCTGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TCGGGCCGCCTCCTCTCCAGCAGCAGTAACTTGTTCTaGAGCTCGTACACAGCATCCTCCGTGGCTCGCCTC +
Preference number: 6 (lower is better)
Translates to: SGRLLSSSSNLF*SSYTASSVARL
Trigger: GAGGCGAGCCACGGAGGATGCTGTGTACGAGCTGCAGAACAAGTTACTGCTGCTGGAGAGGAGGCGGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TGGCGGGGAGCAGTAGTAGGCCACTTAGAGGATCTTTaGGGCAGCGCCCCATGGCCTCCTTGTAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: WRGAVVGHLEDL*GSAPWPPCSSA
Trigger: GGCTGAGCTACAAGGAGGCCATGGGGCGCTGCCGCAAAGATCCTCTAAGTGGCCTACTACTGCTCCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp ACGGGGCCCTCAAGTGCCAGGGCGGCTTCAAAGCCTTaGATGACCCTGTCTGCCTCCTGGATCTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: TGPSSARAASKP*MTLSASWICFS
Trigger: GGAGAAGCAGATCCAGGAGGCAGACAGGGTCATCCAAGGCTTTGAAGCCGCCCTGGCACTTGAGGGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TGCACCTCAGCCACCCGCTTCCTCTCTTCCTCAAGCTaGGTCTTCAGGACCTCTGACTCCGCCGTCCTTGCG +
Preference number: 6 (lower is better)
Translates to: CTSATRFLSSSS*VFRTSDSAVLA
Trigger: CGCAAGGACGGCGGAGTCAGAGGTCCTGAAGACCCAGCTTGAGGAAGAGAGGAAGCGGGTGGCTGAGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp GGAGGCGGCCATCTTTGTACCTGTGGTACTCTTCTTTaGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATGG +
Preference number: 6 (lower is better)
Translates to: GGGHLCTCGTLL*KCGGSGGRPRW
Trigger: CCATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp TCGGCGCCACGAGGCCGCCTTCAGCAGCTCACGGTATaGGTTCCTGATGGTGTTTGCATCCGGTCCCACCAG +
Preference number: 6 (lower is better)
Translates to: SAPRGRLQQLTV*VPDGVCIRSHQ
Trigger: CTGGTGGGACCGGATGCAAACACCATCAGGAACCAATACCGTGAGCTGCTGAAGGCGGCCTCGTGGCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GGGGAGCCGGAGGAGTCCCCAGTGCCAAAGCCGTACTaGGTATCCAGGTTGGAGCTGAGCTTTGCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: GEPEESPVPKPY*VSRLELSFARV
Trigger: GACCCTGGCAAAGCTCAGCTCCAACCTGGATACCAAGTACGGCTTTGGCACTGGGGACTCCTCCGGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GACGGGGCCCTCAAGTGCCAGGGCGGCTTCAAAGCCTaGGATGACCCTGTCTGCCTCCTGGATCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: DGALKCQGGFKA*DDPVCLLDLLL
Trigger: GAGAAGCAGATCCAGGAGGCAGACAGGGTCATCCAAGGCTTTGAAGCCGCCCTGGCACTTGAGGGCCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GGGAGGCGGCCATCTTTGTACCTGTGGTACTCTTCTTaGGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATG +
Preference number: 6 (lower is better)
Translates to: GRRPSLYLWYSS*EMRRQRRAASM
Trigger: CATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp GAGCCGGAGGAGTCCCCAGTGCCAAAGCCGTACTTGGTATCCAGGTaGGAGCTGAGCTTTGCCAGGGTCTGGCTGACTGAGTCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: EPEESPVPKPYLVSR*ELSFARVWLTESAS
Trigger: AGAGGCGGACTCAGTCAGCCAGACCCTGGCAAAGCTCAGCTCCAACCTGGATACCAAGTACGGCTTTGGCACTGGGGACTCCTCCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp AGCTCTGTGGGGGAGCCGGAGGAGTCCCCAGTGCCAAAGCCGTACTaGGTATCCAGGTTGGAGCTGAGCTTTGCCAGGGTCTGGCTGACT +
Preference number: 6 (lower is better)
Translates to: SSVGEPEESPVPKPY*VSRLELSFARVWLT
Trigger: AGTCAGCCAGACCCTGGCAAAGCTCAGCTCCAACCTGGATACCAAGTACGGCTTTGGCACTGGGGACTCCTCCGGCTCCCCCACAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp GGCACGAACCTGGCGCTGCTGGCGCGGCAGGTCTTGGCAGAACTCTaGGAAATTGTTCTGCAGCGCACTGCACGCATGCTCAGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: GTNLALLARQVLAEL*EIVLQRTARMLSGL
Trigger: AAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp ACGGTCAGTGAGGGCACGAACCTGGCGCTGCTGGCGCGGCAGGTCTaGGCAGAACTCTTGGAAATTGTTCTGCAGCGCACTGCACGCATG +
Preference number: 6 (lower is better)
Translates to: TVSEGTNLALLARQV*AELLEIVLQRTARM
Trigger: CATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCGTGCCCTCACTGACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp ACCACTATCTGCTCCTCGGGCCGCCTCCTCTCCAGCAGCAGTAACTaGTTCTGCAGCTCGTACACAGCATCCTCCGTGGCTCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TTICSSGRLLSSSSN*FCSSYTASSVARLL
Trigger: GAGGAGGCGAGCCACGGAGGATGCTGTGTACGAGCTGCAGAACAAGTTACTGCTGCTGGAGAGGAGGCGGCCCGAGGAGCAGATAGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp TCATTGCCGGTCTCCGGTTCCAAGATGCAGATCTTGGTGGAGAGGTaGGTCTCCCGGGTCTGGGTCTCCTGGTTGAGCTCCTCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SLPVSGSKMQILVER*VSRVWVSWLSSSRL
Trigger: GAGCCGGGAGGAGCTCAACCAGGAGACCCAGACCCGGGAGACCAACCTCTCCACCAAGATCTGCATCTTGGAACCGGAGACCGGCAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp ACGAGGCCGCCTTCAGCAGCTCACGGTATTGGTTCCTaGTGGTGTTTGCATCCGGTCCCACCAGCGTCCGCA +
Preference number: 6 (lower is better)
Translates to: TRPPSAAHGIGS*WCLHPVPPASA
Trigger: TGCGGACGCTGGTGGGACCGGATGCAAACACCATCAGGAACCAATACCGTGAGCTGCTGAAGGCGGCCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp TTATGCTCCGCTCCTGGGCCAGCAGCTCATGCTGCTTaGAGTGCTCATACTCTCGCCTCACGCCAGCGGGGT +
Preference number: 6 (lower is better)
Translates to: LCSAPGPAAHAA*SAHTLASRQRG
Trigger: ACCCCGCTGGCGTGAGGCGAGAGTATGAGCACTTCAAGCAGCATGAGCTGCTGGCCCAGGAGCGGAGCATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp CCTGAGCCTGGATGCTCTCCTGCAAGGAAATCACTCTaGGTCTCTTCGGGGCGGACACTGCCAAGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: PEPGCSPARKSL*VSSGRTLPRRA
Trigger: AGCCCGCCTTGGCAGTGTCCGCCCCGAAGAGACTCAGAGTGATTTCCTTGCAGGAGAGCATCCAGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CTTCAGCAGCTCACGGTATTGGTTCCTGATGGTGTTTaGATCCGGTCCCACCAGCGTCCGCAGCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LQQLTVLVPDGV*IRSHQRPQLLP
Trigger: GGGCAGCAGCTGCGGACGCTGGTGGGACCGGATGCAAACACCATCAGGAACCAATACCGTGAGCTGCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TCCGGGAGCACCTGGAAGATCTCGCTGACTCGCTCCTaGAGCTGCACCTTGGGCTTCTGCTTTTCCACCACC +
Preference number: 6 (lower is better)
Translates to: SGSTWKISLTRS*SCTLGFCFSTT
Trigger: GGTGGTGGAAAAGCAGAAGCCCAAGGTGCAGCTGCAGGAGCGAGTCAGCGAGATCTTCCAGGTGCTCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp GTCTTCTGGCTAAGCAGCCTCCCCTCCTCCTGTAGCTaGCGGGCTTTCTGCTGTTTCTGCTGCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VFWLSSLPSSCS*RAFCCFCCSSS
Trigger: GGAGCTGGAGCAGCAGAAACAGCAGAAAGCCCGGCAGCTACAGGAGGAGGGGAGGCTGCTTAGCCAGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp AGGGCACGAACCTGGCGCTGCTGGCGCGGCAGGTCTTaGCAGAACTCTTGGAAATTGTTCTGCAGCGCACTG +
Preference number: 6 (lower is better)
Translates to: RARTWRCWRGRS*QNSWKLFCSAL
Trigger: CAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCGCCAGGTTCGTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp CGCAACCGTTGCATCTCACTGTGGAGCTGGGTAACCTaGCTGTCCAGGCCAGGGTCCCTCTCGATTTGGGTG +
Preference number: 6 (lower is better)
Translates to: RNRCISLWSWVT*LSRPGSLSIWV
Trigger: CACCCAAATCGAGAGGGACCCTGGCCTGGACAGCCAGGTTACCCAGCTCCACAGTGAGATGCAACGGTTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp GGGAGGCCGCGCGGTAGCAGCGATAGCCTTCTAGCATaGCGGGGAGCAGTAGTAGGCCACTTAGAGGATCTT +
Preference number: 6 (lower is better)
Translates to: GRPRGSSDSLLA*RGAVVGHLEDL
Trigger: AAGATCCTCTAAGTGGCCTACTACTGCTCCCCGCCATGCTAGAAGGCTATCGCTGCTACCGCGCGGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp CTGGCGCTGCTGGCGCGGCAGGTCTTGGCAGAACTCTaGGAAATTGTTCTGCAGCGCACTGCACGCATGCTC +
Preference number: 6 (lower is better)
Translates to: LALLARQVLAEL*EIVLQRTARML
Trigger: GAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp TGCTCCTCGGGCCGCCTCCTCTCCAGCAGCAGTAACTaGTTCTGCAGCTCGTACACAGCATCCTCCGTGGCT +
Preference number: 6 (lower is better)
Translates to: CSSGRLLSSSSN*FCSSYTASSVA
Trigger: AGCCACGGAGGATGCTGTGTACGAGCTGCAGAACAAGTTACTGCTGCTGGAGAGGAGGCGGCCCGAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp TTCTCGTGCCGCACGACTTCTTTGCTCACCATCTTGGTCTCCACCTaGGACCTTTCCCGCTTCCACTCATCGCGTTCGCCCTGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: FSCRTTSLLTILVST*DLSRFHSSRSPWSR
Trigger: CCGGCTCCAGGGCGAACGCGATGAGTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCACGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp TCGGAGATGGGGAGGCGGCCATCTTTGTACCTGTGGTACTCTTCTTaGGAAATGCGGCGGCAGCGGAGGGCGGCCTCGATGGAGTATTGC +
Preference number: 6 (lower is better)
Translates to: SEMGRRPSLYLWYSS*EMRRQRRAASMEYC
Trigger: GCAATACTCCATCGAGGCCGCCCTCCGCTGCCGCCGCATTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCCCCATCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CCTGCCACAAGCAGGGCAAACTCGGAGATGGGGAGGCGGCCATCTTaGTACCTGTGGTACTCTTCTTTGGAAATGCGGCGGCAGCGGAGG +
Preference number: 6 (lower is better)
Translates to: PATSRANSEMGRRPS*YLWYSSLEMRRQRR
Trigger: CCTCCGCTGCCGCCGCATTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCCCCATCTCCGAGTTTGCCCTGCTTGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp CCTGGCTGTCCAGGCCAGGGTCCCTCTCGATTTGGGTaGCCTCTTTGGTCAGCAGGTGAGGTTGCATGGTCT +
Preference number: 6 (lower is better)
Translates to: PGCPGQGPSRFG*PLWSAGEVAWS
Trigger: AGACCATGCAACCTCACCTGCTGACCAAAGAGGTCACCCAAATCGAGAGGGACCCTGGCCTGGACAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp AACTCTTGGAAATTGTTCTGCAGCGCACTGCACGCATaGTCAGTGGCCTTCAGCTGGCGGTGCAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: NSWKLFCSALHA*SVAFSWRCSPS
Trigger: GCTGGGGCTGCACCGCCAGCTGAAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TGGCGCTGCTGGCGCGGCAGGTCTTGGCAGAACTCTTaGAAATTGTTCTGCAGCGCACTGCACGCATGCTCA +
Preference number: 6 (lower is better)
Translates to: WRCWRGRSWQNS*KLFCSALHACS
Trigger: TGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCGCCAGCAGCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp CATTGCCGGTCTCCGGTTCCAAGATGCAGATCTTGGTaGAGAGGTTGGTCTCCCGGGTCTGGGTCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: HCRSPVPRCRSW*RGWSPGSGSPG
Trigger: ACCAGGAGACCCAGACCCGGGAGACCAACCTCTCCACCAAGATCTGCATCTTGGAACCGGAGACCGGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp ATCGCCTGCTCCAGGTCTTTGATGCGAGCCTGTATCTaGGCAACGGTCTCCTTCGCCCCCTTCCTCCGTGCA +
Preference number: 6 (lower is better)
Translates to: IACSRSLMRACI*ATVSFAPFLRA
Trigger: TGCACGGAGGAAGGGGGCGAAGGAGACCGTTGCCAAGATACAGGCTCGCATCAAAGACCTGGAGCAGGCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp TGCAGCTCCTGCAGTTCCCTGGCCAACGCGACGTTGTaGTTCTTCTCCTCCTCCAGGAGGCTTCTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: CSSCSSLANATL*FFSSSRRLLSL
Trigger: CAGGCTGAGAAGCCTCCTGGAGGAGGAGAAGAACAACAACGTCGCGTTGGCCAGGGAACTGCAGGAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp TCCTGCAGCTCCTGCAGTTCCCTGGCCAACGCGACGTaGTTGTTCTTCTCCTCCTCCAGGAGGCTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: SCSSCSSLANAT*LFFSSSRRLLS
Trigger: GCTGAGAAGCCTCCTGGAGGAGGAGAAGAACAACAACGTCGCGTTGGCCAGGGAACTGCAGGAGCTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp ACTGAGCTGATCGCCTGCTCCAGGTCTTTGATGCGAGCCTGTATCTaGGCAACGGTCTCCTTCGCCCCCTTCCTCCGTGCAGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: TELIACSRSLMRACI*ATVSFAPFLRAASS
Trigger: GGAAGATGCTGCACGGAGGAAGGGGGCGAAGGAGACCGTTGCCAAGATACAGGCTCGCATCAAAGACCTGGAGCAGGCGATCAGCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp GCCTCCTTCTCCAGCACCGGATCCTTCTCGTGCCGCACGACTTCTTaGCTCACCATCTTGGTCTCCACCTTGGACCTTTCCCGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: ASFSSTGSFSCRTTS*LTILVSTLDLSRFH
Trigger: GTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCACGAGAAGGATCCGGTGCTGGAGAAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp GTCCTGCTCGCGCCCCAGGATTTCTTGTATCAGTCTCTTCTGTGCTaGCAGCTTGTAGGAAATCTGGCTTGGCCCGTCGCTGGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: VLLAPQDFLYQSLLC*QLVGNLAWPVAGLH
Trigger: GTGCAGCCCAGCGACGGGCCAAGCCAGATTTCCTACAAGCTGCAAGCACAGAAGAGACTGATACAAGAAATCCTGGGGCGCGAGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp GAGGCGGGACACGGTGGCCTGGTCCTGCTCGCGCCCCAGGATTTCTaGTATCAGTCTCTTCTGTGCTTGCAGCTTGTAGGAAATCTGGCT +
Preference number: 6 (lower is better)
Translates to: EAGHGGLVLLAPQDF*YQSLLCLQLVGNLA
Trigger: AGCCAGATTTCCTACAAGCTGCAAGCACAGAAGAGACTGATACAAGAAATCCTGGGGCGCGAGCAGGACCAGGCCACCGTGTCCCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp ACAATGACCTTGGGCTCCACTGAGCTGATCGCCTGCTCCAGGTCTTaGATGCGAGCCTGTATCTTGGCAACGGTCTCCTTCGCCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TMTLGSTELIACSRS*MRACILATVSFAPF
Trigger: GAAGGGGGCGAAGGAGACCGTTGCCAAGATACAGGCTCGCATCAAAGACCTGGAGCAGGCGATCAGCTCAGTGGAGCCCAAGGTCATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp TATTTCTCCTGCAGCTCCTGCAGTTCCCTGGCCAACGCGACGTTGTaGTTCTTCTCCTCCTCCAGGAGGCTTCTCAGCCTGGAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: YFSCSSCSSLANATL*FFSSSRRLLSLEAS
Trigger: GGAGGCTTCCAGGCTGAGAAGCCTCCTGGAGGAGGAGAAGAACAACAACGTCGCGTTGGCCAGGGAACTGCAGGAGCTGCAGGAGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CTGTATTTCTCCTGCAGCTCCTGCAGTTCCCTGGCCAACGCGACGTaGTTGTTCTTCTCCTCCTCCAGGAGGCTTCTCAGCCTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: LYFSCSSCSSLANAT*LFFSSSRRLLSLEA
Trigger: GGCTTCCAGGCTGAGAAGCCTCCTGGAGGAGGAGAAGAACAACAACGTCGCGTTGGCCAGGGAACTGCAGGAGCTGCAGGAGAAATACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp AGCACCGGATCCTTCTCGTGCCGCACGACTTCTTTGCTCACCATCTaGGTCTCCACCTTGGACCTTTCCCGCTTCCACTCATCGCGTTCG +
Preference number: 6 (lower is better)
Translates to: STGSFSCRTTSLLTI*VSTLDLSRFHSSRS
Trigger: CGAACGCGATGAGTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCACGAGAAGGATCCGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp GGAGACTTGGAGATGATGGACCCAATGGAGAGTGAAGAACTCGGCTaGGTCTCCCCTGCCACAAGCAGGGCAAACTCGGAGATGGGGAGG +
Preference number: 6 (lower is better)
Translates to: GDLEMMDPMESEELG*VSPATSRANSEMGR
Trigger: CCTCCCCATCTCCGAGTTTGCCCTGCTTGTGGCAGGGGAGACCAAGCCGAGTTCTTCACTCTCCATTGGGTCCATCATCTCCAAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CTTGGTGATGGGGTCTGTCAGATCCTTCTCGTAGCCGGATTCATCTaGCAGGAGCTGGCCCAGGTCTTCGCTGATCATCCCGCAGAGCAC +
Preference number: 6 (lower is better)
Translates to: LGDGVCQILLVAGFI*QELAQVFADHPAEH
Trigger: GTGCTCTGCGGGATGATCAGCGAAGACCTGGGCCAGCTCCTGCAAGATGAATCCGGCTACGAGAAGGATCTGACAGACCCCATCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp GCAGCTGGGGCACTTTTGGTCTCTCCTCCAGGGCCCTaGACCAGCCACGTGTATGGGTCAGCATTATCCTTG +
Preference number: 6 (lower is better)
Translates to: AAGALLVSPPGP*TSHVYGSALSL
Trigger: CAAGGATAATGCTGACCCATACACGTGGCTGGTTCAGGGCCCTGGAGGAGAGACCAAAAGTGCCCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp GGCTCTGCACATCATTGTATCTGTTCTTCACACTGTTaGGGACCACGGGCAGTTGCAGGGCAGCGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: GSAHHCICSSHC*GPRAVAGQRSP
Trigger: CGGGCTCCGCTGCCCTGCAACTGCCCGTGGTCCTCAACAGTGTGAAGAACAGATACAATGATGTGCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TGCAGATCTCCAACAGCCCTCTCTGCTATGGCCAGCTaGTTCTCCTCTGCCTCCAGCTGTAGCAGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: CRSPTALSAMAS*FSSASSCSRSS
Trigger: AGAGCTCCTGCTACAGCTGGAGGCAGAGGAGAAGCAGCTGGCCATAGCAGAGAGGGCTGTTGGAGATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CGGTTCTTCTCTGTAGACAGCTTCTGCTTCAGGGTCTaGAGCTCCGTGGCCAGCCTAGAGGCTTTGGCCACA +
Preference number: 6 (lower is better)
Translates to: RFFSVDSFCFRV*SSVASLEALAT
Trigger: TGTGGCCAAAGCCTCTAGGCTGGCCACGGAGCTGCAGACCCTGAAGCAGAAGCTGTCTACAGAGAAGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CGCGGCAGGTCTTGGCAGAACTCTTGGAAATTGTTCTaGAGCGCACTGCACGCATGCTCAGTGGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RGRSWQNSWKLF*SALHACSVAFS
Trigger: GCTGAAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAGACCTGCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CTTTGGTCAGCAGGTGAGGTTGCATGGTCTTCCTCTTaGCCTCCAAGTGGACAACCTTCTGGGCCACCGCCT +
Preference number: 6 (lower is better)
Translates to: LWSAGEVAWSSS*PPSGQPSGPPP
Trigger: AGGCGGTGGCCCAGAAGGTTGTCCACTTGGAGGGCAAGAGGAAGACCATGCAACCTCACCTGCTGACCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CCAGCACCGGATCCTTCTCGTGCCGCACGACTTCTTTaGTCACCATCTTGGTCTCCACCTTGGACCTTTCCC +
Preference number: 6 (lower is better)
Translates to: PAPDPSRAARLL*SPSWSPPWTFP
Trigger: GGGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCACGAGAAGGATCCGGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp GCGTGTGCCGGACTCCCAGATCCCTGTCTCGCGCTGTaGATGGCTTGGATGTCCTCATCAAGTTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: ACAGLPDPCLAL*MAWMSSSSSFF
Trigger: GAAGAAGGAACTTGATGAGGACATCCAAGCCATCCACAGCGCGAGACAGGGATCTGGGAGTCCGGCACACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TTCGCCCCCTTCCTCCGTGCAGCATCTTCCTCGATCTaGAGCCTCAGAGTCTGGGCCGCCTTAACCATTTCT +
Preference number: 6 (lower is better)
Translates to: FAPFLRAASSSI*SLRVWAALTIS
Trigger: AGAAATGGTTAAGGCGGCCCAGACTCTGAGGCTCCAGATCGAGGAAGATGCTGCACGGAGGAAGGGGGCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TGTCATTGCCGGTCTCCGGTTCCAAGATGCAGATCTTaGTGGAGAGGTTGGTCTCCCGGGTCTGGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: CHCRSPVPRCRS*WRGWSPGSGSP
Trigger: AGGAGACCCAGACCCGGGAGACCAACCTCTCCACCAAGATCTGCATCTTGGAACCGGAGACCGGCAATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp TGGTCTCCCCTGCCACAAGCAGGGCAAACTCGGAGATaGGGAGGCGGCCATCTTTGTACCTGTGGTACTCTT +
Preference number: 6 (lower is better)
Translates to: WSPLPQAGQTRR*GGGHLCTCGTL
Trigger: AAGAGTACCACAGGTACAAAGATGGCCGCCTCCCCATCTCCGAGTTTGCCCTGCTTGTGGCAGGGGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GAGTCCCCAGTGCCAAAGCCGTACTTGGTATCCAGGTaGGAGCTGAGCTTTGCCAGGGTCTGGCTGACTGAG +
Preference number: 6 (lower is better)
Translates to: ESPVPKPYLVSR*ELSFARVWLTE
Trigger: CTCAGTCAGCCAGACCCTGGCAAAGCTCAGCTCCAACCTGGATACCAAGTACGGCTTTGGCACTGGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp ATGTCATTGCCGGTCTCCGGTTCCAAGATGCAGATCTaGGTGGAGAGGTTGGTCTCCCGGGTCTGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: MSLPVSGSKMQI*VERLVSRVWVS
Trigger: GGAGACCCAGACCCGGGAGACCAACCTCTCCACCAAGATCTGCATCTTGGAACCGGAGACCGGCAATGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GATGCCGGTGAAGGCCTTCTGAGCATTGAGCAGCCGTaGAGTGGAGGTGTTCTCAATGAGTCCCCGCTCCAC +
Preference number: 6 (lower is better)
Translates to: DAGEGLLSIEQP*SGGVLNESPLH
Trigger: GTGGAGCGGGGACTCATTGAGAACACCTCCACTCAACGGCTGCTCAATGCTCAGAAGGCCTTCACCGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GGGGTCTGTCAGATCCTTCTCGTAGCCGGATTCATCTaGCAGGAGCTGGCCCAGGTCTTCGCTGATCATCCC +
Preference number: 6 (lower is better)
Translates to: GVCQILLVAGFI*QELAQVFADHP
Trigger: GGGATGATCAGCGAAGACCTGGGCCAGCTCCTGCAAGATGAATCCGGCTACGAGAAGGATCTGACAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp AGGGTCCCTCTCGATTTGGGTGACCTCTTTGGTCAGCAGGTGAGGTaGCATGGTCTTCCTCTTGCCCTCCAAGTGGACAACCTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: RVPLDLGDLFGQQVR*HGLPLALQVDNLLG
Trigger: GCCCAGAAGGTTGTCCACTTGGAGGGCAAGAGGAAGACCATGCAACCTCACCTGCTGACCAAAGAGGTCACCCAAATCGAGAGGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp TTCTCCTGTGATTTAGTTTTCTGGAGGAGGTCGACCTaGACCTGCAGACCCTGGCACTCCCGGTGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: FSCDLVFWRRST*TCRPWHSRCSS
Trigger: CGAGCTGCACCGGGAGTGCCAGGGTCTGCAGGTTCAGGTCGACCTCCTCCAGAAAACTAAATCACAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp CCAGCTCCTGCAGCTGGAGATACTGGCCTCTGTCGATaGCACCCCTCTTGTAGGCCTCGTAAGGAGACATGT +
Preference number: 6 (lower is better)
Translates to: PAPAAGDTGLCR*HPSCRPRKETC
Trigger: ACATGTCTCCTTACGAGGCCTACAAGAGGGGTGTCATCGACAGAGGCCAGTATCTCCAGCTGCAGGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CTTGGCAGAACTCTTGGAAATTGTTCTGCAGCGCACTaGACGCATGCTCAGTGGCCTTCAGCTGGCGGTGCA +
Preference number: 6 (lower is better)
Translates to: LGRTLGNCSAAH*THAQWPSAGGA
Trigger: TGCACCGCCAGCTGAAGGCCACTGAGCATGCGTGCAGTGCGCTGCAGAACAATTTCCAAGAGTTCTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp ACCTCCGCTTCCTTCAGGTTGCGGCCAGTCTCCTGCTaGTGTTGTAAAGCCTGGTTCTGCTCACCATTCTGC +
Preference number: 6 (lower is better)
Translates to: TSASFRLRPVSC*CCKAWFCSPFC
Trigger: GCAGAATGGTGAGCAGAACCAGGCTTTACAACACCAGCAGGAGACTGGCCGCAACCTGAAGGAAGCGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp GCACGACTTCTTTGCTCACCATCTTGGTCTCCACCTTaGACCTTTCCCGCTTCCACTCATCGCGTTCGCCCT +
Preference number: 6 (lower is better)
Translates to: ARLLCSPSWSPP*TFPASTHRVRP
Trigger: AGGGCGAACGCGATGAGTGGAAGCGGGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp AGGCTCTGCACATCATTGTATCTGTTCTTCACACTGTaGAGGACCACGGGCAGTTGCAGGGCAGCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: RLCTSLYLFFTL*RTTGSCRAAEP
Trigger: GGGCTCCGCTGCCCTGCAACTGCCCGTGGTCCTCAACAGTGTGAAGAACAGATACAATGATGTGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp CACGGTGGCCTGGTCCTGCTCGCGCCCCAGGATTTCTaGTATCAGTCTCTTCTGTGCTTGCAGCTTGTAGGA +
Preference number: 6 (lower is better)
Translates to: HGGLVLLAPQDF*YQSLLCLQLVG
Trigger: TCCTACAAGCTGCAAGCACAGAAGAGACTGATACAAGAAATCCTGGGGCGCGAGCAGGACCAGGCCACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp TTGGGCTCCACTGAGCTGATCGCCTGCTCCAGGTCTTaGATGCGAGCCTGTATCTTGGCAACGGTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LGSTELIACSRS*MRACILATVSF
Trigger: GAAGGAGACCGTTGCCAAGATACAGGCTCGCATCAAAGACCTGGAGCAGGCGATCAGCTCAGTGGAGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp TCCAGCACCGGATCCTTCTCGTGCCGCACGACTTCTTaGCTCACCATCTTGGTCTCCACCTTGGACCTTTCC +
Preference number: 6 (lower is better)
Translates to: SSTGSFSCRTTS*LTILVSTLDLS
Trigger: GGAAAGGTCCAAGGTGGAGACCAAGATGGTGAGCAAAGAAGTCGTGCGGCACGAGAAGGATCCGGTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp AGCAGGGCAAACTCGGAGATGGGGAGGCGGCCATCTTaGTACCTGTGGTACTCTTCTTTGGAAATGCGGCGG +
Preference number: 6 (lower is better)
Translates to: SRANSEMGRRPS*YLWYSSLEMRR
Trigger: CCGCCGCATTTCCAAAGAAGAGTACCACAGGTACAAAGATGGCCGCCTCCCCATCTCCGAGTTTGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp GTGGAGGTGTTCTCAATGAGTCCCCGCTCCACCGCCTaGTGTACGGAGTACCGTTCTCGGCTAAGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: VEVFSMSPRSTA*CTEYRSRLRRS
Trigger: TGACCTTCTTAGCCGAGAACGGTACTCCGTACACAAGGCGGTGGAGCGGGGACTCATTGAGAACACCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CACATCATTGTATCTGTTCTTCACACTGTTGAGGACCACGGGCAGTaGCAGGGCAGCGGAGCCCGTAGGCTTGGTAGACAGAAACGCCTC +
Preference number: 6 (lower is better)
Translates to: HIIVSVLHTVEDHGQ*QGSGARRLGRQKRL
Trigger: GAGGCGTTTCTGTCTACCAAGCCTACGGGCTCCGCTGCCCTGCAACTGCCCGTGGTCCTCAACAGTGTGAAGAACAGATACAATGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp TTATCCTTGAGTGTGTACCGCTCTCCCCGAAGCAGCTaGACTTCTCCCGAGTCCCAGTCACAGATGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LSLSVYRSPRSS*TSPESQSQMLS
Trigger: GGACAGCATCTGTGACTGGGACTCGGGAGAAGTTCAGCTGCTTCGGGGAGAGCGGTACACACTCAAGGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp TCCCTCTCGATTTGGGTGACCTCTTTGGTCAGCAGGTaGGGTTGCATGGTCTTCCTCTTGCCCTCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: SLSIWVTSLVSR*GCMVFLLPSKW
Trigger: CCACTTGGAGGGCAAGAGGAAGACCATGCAACCTCACCTGCTGACCAAAGAGGTCACCCAAATCGAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TTCACCACGACCTTCTCCTTCACGTTCATCTCCTTCTaGTCCAGGGCTAGCAGCTCGTCCTTCAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: FTTTFSFTFISF*SRASSSSFSSS
Trigger: GGAAGAGCTGAAGGACGAGCTGCTAGCCCTGGAGCAGAAGGAGATGAACGTGAAGGAGAAGGTCGTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp AAGGAGACATGTCATTGCCGGTCTCCGGTTCCAAGATaGAGATCTTGGTGGAGAGGTTGGTCTCCCGGGTCT +
Preference number: 6 (lower is better)
Translates to: KETCHCRSPVPR*RSWWRGWSPGS
Trigger: AGACCCGGGAGACCAACCTCTCCACCAAGATCTGCATCTTGGAACCGGAGACCGGCAATGACATGTCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp GGACTCCCAGATCCCTGTCTCGCGCTGTGGATGGCTTaGATGTCCTCATCAAGTTCCTTCTTCCTGAGCATC +
Preference number: 6 (lower is better)
Translates to: GLPDPCLALWMA*MSSSSSFFLSI
Trigger: GATGCTCAGGAAGAAGGAACTTGATGAGGACATCCAAGCCATCCACAGCGCGAGACAGGGATCTGGGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CCA 72 bp CGTGCAGCATCTTCCTCGATCTGGAGCCTCAGAGTCTaGGCCGCCTTAACCATTTCTAGATCCTTCTCCACC +
Preference number: 6 (lower is better)
Translates to: RAASSSIWSLRV*AALTISRSFST
Trigger: GGTGGAGAAGGATCTAGAAATGGTTAAGGCGGCCCAGACTCTGAGGCTCCAGATCGAGGAAGATGCTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp TGCGTGTGCCGGACTCCCAGATCCCTGTCTCGCGCTGTGGATGGCTaGGATGTCCTCATCAAGTTCCTTCTTCCTGAGCATCTTTTTAGC +
Preference number: 6 (lower is better)
Translates to: CVCRTPRSLSRAVDG*DVLIKFLLPEHLFS
Trigger: GCTAAAAAGATGCTCAGGAAGAAGGAACTTGATGAGGACATCCAAGCCATCCACAGCGCGAGACAGGGATCTGGGAGTCCGGCACACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TTCACAATGACCTTGGGCTCCACTGAGCTGATCGCCTaGTCCAGGTCTTTGATGCGAGCCTGTATCTTGGCA +
Preference number: 6 (lower is better)
Translates to: FTMTLGSTELIA*SRSLMRACILA
Trigger: TGCCAAGATACAGGCTCGCATCAAAGACCTGGAGCAGGCGATCAGCTCAGTGGAGCCCAAGGTCATTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp TGCTTTTCCACCACCCTGTATTTCTCCTGCAGCTCCTaGAGTTCCCTGGCCAACGCGACGTTGTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: CFSTTLYFSCSS*SSLANATLLFF
Trigger: GAAGAACAACAACGTCGCGTTGGCCAGGGAACTGCAGGAGCTGCAGGAGAAATACAGGGTGGTGGAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp CTCGATTTGGGTGACCTCTTTGGTCAGCAGGTGAGGTaGCATGGTCTTCCTCTTGCCCTCCAAGTGGACAAC +
Preference number: 6 (lower is better)
Translates to: LDLGDLFGQQVR*HGLPLALQVDN
Trigger: GTTGTCCACTTGGAGGGCAAGAGGAAGACCATGCAACCTCACCTGCTGACCAAAGAGGTCACCCAAATCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp CGCAGAGCTTCTGTAGACCTCTCCAGGTCAGGATCTTTCTCTAACTaGACCACTTCCTCCATGATGATCTTTTCCTGCAGGGCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: RRASVDLSRSGSFSN*TTSSMMIFSCRAGG
Trigger: GCCCCCTGCCCTGCAGGAAAAGATCATCATGGAGGAAGTGGTCAAGTTAGAGAAAGATCCTGACCTGGAGAGGTCTACAGAAGCTCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 90 bp TGGGCCTCCAACAGCTTCTGCCCAGTGATAGGATCCAGCATGTTCTaGGCCACAGCTGCCTTGATGCTACACTTGTTGTCTGTGGTTGTA +
Preference number: 6 (lower is better)
Translates to: WASNSFCPVIGSSMF*ATAALMLHLLSVVV
Trigger: TACAACCACAGACAACAAGTGTAGCATCAAGGCAGCTGTGGCCAAGAACATGCTGGATCCTATCACTGGGCAGAAGCTGTTGGAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS GCA 72 bp CCCAGTGATAGGATCCAGCATGTTCTTGGCCACAGCTaGCTTGATGCTACACTTGTTGTCTGTGGTTGTATC +
Preference number: 6 (lower is better)
Translates to: PSDRIQHVLGHS*LDATLVVCGCI
Trigger: GATACAACCACAGACAACAAGTGTAGCATCAAGGCAGCTGTGGCCAAGAACATGCTGGATCCTATCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS CAA 72 bp AACAGCTTCTGCCCAGTGATAGGATCCAGCATGTTCTaGGCCACAGCTGCCTTGATGCTACACTTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: NSFCPVIGSSMF*ATAALMLHLLS
Trigger: AGACAACAAGTGTAGCATCAAGGCAGCTGTGGCCAAGAACATGCTGGATCCTATCACTGGGCAGAAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4
CDS TCA 72 bp GACCCTGATCACTTCCTTGTATATGGTCTTCTCCTGTaGTTTAGTTTTCTGGAGGAGGTCGACCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: DPDHFLVYGLLL*FSFLEEVDLNL
Trigger: CAGGTTCAGGTCGACCTCCTCCAGAAAACTAAATCACAGGAGAAGACCATATACAAGGAAGTGATCAGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037007.4