RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EVI5L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000011832

Ensembl transcript IDs: ENSMUST00000176072.9, ENSMUST00000176149.9, ENSMUST00000176645.2, ENSMUST00000176764.9, ENSMUST00000176825.3, ENSMUST00000177053.8, ENSMUST00000239400.2

Found 605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAATCCGAGTGGTTCAGCTGGCCCTGGATGCGGCCCTCCTCCCTCTaGCGGGAGGGCCGGAGTACTGTCGGTCAGAGCTTGGCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: ESEWFSWPWMRPSSL*REGRSTVGQSLASP
Trigger: GGGGCTGGCCAAGCTCTGACCGACAGTACTCCGGCCCTCCCGGCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 90 bp CCGCGGGAAAGATGGGCCTGCCAGGTGTCTGAGAGCTCCTGCAGCTaGAGCTTTAGCTCCCGAGCAGAGGCTACGGCCTCGCCCTCCCGC +
Preference number: 1 (lower is better)
Translates to: PRERWACQVSESSCS*SFSSRAEATASPSR
Trigger: GCGGGAGGGCGAGGCCGTAGCCTCTGCTCGGGAGCTAAAGCTGCAGCTGCAGGAGCTCTCAGACACCTGGCAGGCCCATCTTTCCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 90 bp CCCGGATGTACTGCGATGAATCCGAGTGGTTCAGCTGGCCCTGGATaGGGCCCTCCTCCCTCTGCCGGGAGGGCCGGAGTACTGTCGGTC +
Preference number: 1 (lower is better)
Translates to: PGCTAMNPSGSAGPG*GPPPSAGRAGVLSV
Trigger: GACCGACAGTACTCCGGCCCTCCCGGCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 90 bp CTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCTCTGTGCTaGCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCAC +
Preference number: 1 (lower is better)
Translates to: LLCRAGLPVGPAPLC*LLHLALSWQELQRH
Trigger: GTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAGCACAGAGGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR CCA 90 bp TCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTGGTTCAGCTaGCCCTGGATGCGGCCCTCCTCCCTCTGCCGGGAGGGCCGGAGT +
Preference number: 1 (lower is better)
Translates to: SFSSRMYCDESEWFS*PWMRPSSLCREGRS
Trigger: ACTCCGGCCCTCCCGGCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 90 bp GGCCCCCACCCCGGGATCCCTAGATGTGGAGCCAGAACCAATGCCTaGCTCTGGCAGTGCGAAGGTGACTGCTGCAGACTGTGCAGGAGC +
Preference number: 1 (lower is better)
Translates to: GPHPGIPRCGARTNA*LWQCEGDCCRLCRS
Trigger: GCTCCTGCACAGTCTGCAGCAGTCACCTTCGCACTGCCAGAGCCAGGCATTGGTTCTGGCTCCACATCTAGGGATCCCGGGGTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR GCA 90 bp CTTGCGGCGGCTTTCGCTGAGCTGAGTCTGGAGTCCCTTGTTCTGTaGTGCCAGGTACTGCAACTTCTCCTGCAGGGCCGCGCGTTCCGC +
Preference number: 1 (lower is better)
Translates to: LAAAFAELSLESLVL*CQVLQLLLQGRAFR
Trigger: GCGGAACGCGCGGCCCTGCAGGAGAAGTTGCAGTACCTGGCAGCACAGAACAAGGGACTCCAGACTCAGCTCAGCGAAAGCCGCCGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 90 bp TCGATCTGGTCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTaGTTCAGCTGGCCCTGGATGCGGCCCTCCTCCCTCTGCCGGGAG +
Preference number: 1 (lower is better)
Translates to: SIWSFSSRMYCDESE*FSWPWMRPSSLCRE
Trigger: CTCCCGGCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 90 bp TGTCTGAGCTACCTTCGCTGTCCTTGGCTGGCCGATCCAGGCTTCTaGAGAAGCGCGCGTCCCGGGGAGAGAGAGGGTAGAGTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: CLSYLRCPWLADPGF*RSARPGEREGRVGP
Trigger: AGGACCCACTCTACCCTCTCTCTCCCCGGGACGCGCGCTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTAGCTCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 90 bp CTTGAGCTCCTCGATCTGGTCCTTCAGCTCCCGGATGTACTGCGATaGATCCGAGTGGTTCAGCTGGCCCTGGATGCGGCCCTCCTCCCT +
Preference number: 1 (lower is better)
Translates to: LELLDLVLQLPDVLR*IRVVQLALDAALLP
Trigger: AGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 90 bp TCCTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTaGCTAGGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: SWAPPSRASLVPKGS*LGGGSFLLINKSWG
Trigger: GCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR TCA 90 bp CTCTTGCACTCAGCCTCTGCCTGCTTGCGGCGGCTTTCGCTGAGCTaGGTCTGGAGTCCCTTGTTCTGTGCTGCCAGGTACTGCAACTTC +
Preference number: 1 (lower is better)
Translates to: LLHSASACLRRLSLS*VWSPLFCAARYCNF
Trigger: GAAGTTGCAGTACCTGGCAGCACAGAACAAGGGACTCCAGACTCAGCTCAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTGCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 90 bp GGTCCTCGAATGTCGGTGGGCCTTTCAGCAACCGCACCTCAGTCTTaGGCTCCTCGATCTGGTCCTTCAGCTCCCGGATGTACTGCGATG +
Preference number: 1 (lower is better)
Translates to: GPRMSVGLSATAPQS*APRSGPSAPGCTAM
Trigger: CATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTTGCTGAAAGGCCCACCGACATTCGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 90 bp CATCAGAAGATGGTAGCGAATCCTCATCCAGGTGCCGCGTTAGGCTaGGCCCATCGAAAGCCAGCGGGTCCTCGAATGTCGGTGGGCCTT +
Preference number: 1 (lower is better)
Translates to: HQKMVANPHPGAALG*AHRKPAGPRMSVGL
Trigger: AAGGCCCACCGACATTCGAGGACCCGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACCTGGATGAGGATTCGCTACCATCTTCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 90 bp GCTACGGCCTCGCCCTCCCGCACCTTGAGTGCCTTGAGTTCCTCCTaGAGCCTGGCTACATTGTTCTCATCTGGCAGTGAGCTGTTTCTC +
Preference number: 1 (lower is better)
Translates to: ATASPSRTLSALSSS*SLATLFSSGSELFL
Trigger: GAGAAACAGCTCACTGCCAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAGGGCGAGGCCGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 90 bp CCCAGCAGCTCCTCATCAGAAGATGGTAGCGAATCCTCATCCAGGTaGCGCGTTAGGCTGAGCCCATCGAAAGCCAGCGGGTCCTCGAAT +
Preference number: 1 (lower is better)
Translates to: PSSSSSEDGSESSSR*RVRLSPSKASGSSN
Trigger: ATTCGAGGACCCGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACCTGGATGAGGATTCGCTACCATCTTCTGATGAGGAGCTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 90 bp GGTGGGCCTTTCAGCAACCGCACCTCAGTCTTGAGCTCCTCGATCTaGTCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTGGTTC +
Preference number: 1 (lower is better)
Translates to: GGPFSNRTSVLSSSI*SFSSRMYCDESEWF
Trigger: GAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTTGCTGAAAGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 90 bp ATCTTTCTAGTCCCCACATTTGCTCTTACAGGAGTTCCCCTGCCATaGCCTCCCACTGCTGGCCCAGGTTCCTCTGATGGCCTGTGCACC +
Preference number: 1 (lower is better)
Translates to: IFLVPTFALTGVPLP*PPTAGPGSSDGLCT
Trigger: GGTGCACAGGCCATCAGAGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCAAATGTGGGGACTAGAAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CCA 90 bp TGGGCCCCCAGCTTCAGTTGTCCAGGCCCTGGTTGCTATAAGGAGTaGCTAGTTCATCTGCATCGCTGTCTGAGCTACCTTCGCTGTCCT +
Preference number: 1 (lower is better)
Translates to: WAPSFSCPGPGCYKE*LVHLHRCLSYLRCP
Trigger: AGGACAGCGAAGGTAGCTCAGACAGCGATGCAGATGAACTAGCCACTCCTTATAGCAACCAGGGCCTGGACAACTGAAGCTGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 90 bp ATTTCTCGAAGGGCCCCCAGAGTCTCTGTTTCTCGTAACCGTGACTaGTCCAGTTCTGTCTCCAGGTGGGCCACAAAGTCCTCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: ISRRAPRVSVSRNRD*SSSVSRWATKSSVR
Trigger: CCTCACAGAGGACTTTGTGGCCCACCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGAAACAGAGACTCTGGGGGCCCTTCGAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 90 bp TTTCGGCCCTTGTCCATGTTAGGAGAGCAACACCCTCCAGGTAACTaGCCCACGCACCCCTTGAACTCAGGAGGGCTTGGACAATATGGT +
Preference number: 1 (lower is better)
Translates to: FRPLSMLGEQHPPGN*PTHPLNSGGLGQYG
Trigger: ACCATATTGTCCAAGCCCTCCTGAGTTCAAGGGGTGCGTGGGCCAGTTACCTGGAGGGTGTTGCTCTCCTAACATGGACAAGGGCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR GCA 90 bp ACTCCCCAGAGGAAGATGGGTGCTCTAGGGAAAGGGTTTCTTCTTTaGAGCTTCTATAGCCCTAGAGAGTGGGGAGAGACTTCCCAGGTC +
Preference number: 1 (lower is better)
Translates to: TPQRKMGALGKGFLL*SFYSPREWGETSQV
Trigger: GACCTGGGAAGTCTCTCCCCACTCTCTAGGGCTATAGAAGCTGCAAAGAAGAAACCCTTTCCCTAGAGCACCCATCTTCCTCTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR CCA 90 bp GTCTCTGTTTCTCGTAACCGTGACTGCTCCAGTTCTGTCTCCAGGTaGGCCACAAAGTCCTCTGTGAGGCGAGGGTTTTCCTTACAGATC +
Preference number: 1 (lower is better)
Translates to: VSVSRNRDCSSSVSR*ATKSSVRRGFSLQI
Trigger: GATCTGTAAGGAAAACCCTCGCCTCACAGAGGACTTTGTGGCCCACCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGAAACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 90 bp GCTTCTTTGAATATTTGTGCGGACTCGAGTGTCACAGCGCTGCTGTaGAAGGCAGACAACTTGCAGGAGTTGGTTCCCTCCTTCACTATG +
Preference number: 1 (lower is better)
Translates to: ASLNICADSSVTALL*KADNLQELVPSFTM
Trigger: CATAGTGAAGGAGGGAACCAACTCCTGCAAGTTGTCTGCCTTCCACAGCAGCGCTGTGACACTCGAGTCCGCACAAATATTCAAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR GCA 90 bp CATATCAATGAGTTTTATTTATTCACTTGCTTCTTTGAATATTTGTaGGGACTCGAGTGTCACAGCGCTGCTGTGGAAGGCAGACAACTT +
Preference number: 1 (lower is better)
Translates to: HINEFYLFTCFFEYL*GLECHSAAVEGRQL
Trigger: AAGTTGTCTGCCTTCCACAGCAGCGCTGTGACACTCGAGTCCGCACAAATATTCAAAGAAGCAAGTGAATAAATAAAACTCATTGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR-3UTR GCA 90 bp CCGGGAGGGCCGGAGTACTGTCGGTCAGAGCTTGGCCAGCCCCGGGGTTCACCCATCGGCCAGGGCCTGTaGCTCGCGCAAACGCACAGT +
Preference number: 2 (lower is better)
Translates to: PGGPEYCRSELGQPRGSPIGQGL*LAQTHS
Trigger: ACTGTGCGTTTGCGCGAGGCACAGGCCCTGGCCGAT...GGGTGAACCCCGGGGCTGGCCAAGCTCTGACCGACAGTACTCCGGCCCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCACCTGCCCCTCTGTGCTaGCTCCTCCACCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPPAPLC*LLHLAL
Trigger: GAGGGCCAGGTGGAGGAGGCAGCACAGAGGGGCAGG...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR CCA 90 bp GGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACTGGTTCAGCTGGCCCTaGATGCGGCCCTCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GNGAGGPTQEAPRECCGHWFSWP*MRPSSL
Trigger: GAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCA...GTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR TCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCAGGCCCACGCACCCCTTaGACTCAGGAGGGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPGPRTP*TQEGLD
Trigger: GTCCAAGCCCTCCTGAGTTCAAGGGGTGCGTGGGCC...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR GCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCACCTGCCAGTAGGCCCTaGCCCTCTGTGCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPPASRP*PSVLPP
Trigger: AGGAGGCAGCACAGAGGGGCAGGGCCTACTGGCAGG...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR TCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCACTGCTGCAGGGGCCATaGTGCCTGCACCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPLLQGP*CLHQAE
Trigger: TTCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAG...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR GCA 90 bp CCGGGAGGGCCGGAGTACTGTCGGTCAGAGCTTGGCCAGCCCCGGGGTTCACCCTCTCGTAACCGTGACTaGTCCAGTTCTGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PGGPEYCRSELGQPRGSPSRNRD*SSSVSR
Trigger: CCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGA...GGGTGAACCCCGGGGCTGGCCAAGCTCTGACCGACAGTACTCCGGCCCTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CCA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGACCTGTAGTTCCTaGGCCCCACCCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRQTCSS*APPSRA
Trigger: GGCCCTGCTGGGTGGGGCCCAGGAACTACAGGTCTG...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR TCA 90 bp GGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCCGGATGTACTGCGATaGATCCGAGTGGTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: GNGAGGPTQEAPRECCGHPDVLR*IRVVQL
Trigger: CAGCTGAACCACTCGGATTCATCGCAGTACATCCGG...GTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR TCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCAACCGCACCTCAGTCTTaGGCTCCTCGATCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPTAPQS*APRSGP
Trigger: AGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGT...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR TCA 90 bp TGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCCTGGCAGTGCGAAGGTaGCTGCTGCAGACTGTGCAG +
Preference number: 2 (lower is better)
Translates to: CSYRSSPAMASHCWPRFLLAVRR*LLQTVQ
Trigger: CTGCACAGTCTGCAGCAGTCACCTTCGCACTGCCAG...GAGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR-3UTR GCA 90 bp GCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCTGCCTGGCTCTGGCAGTaGGAAGGTGACTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: ALTGVPLPWPPTAGPGSSAWLWQ*EGDCCR
Trigger: TCTGCAGCAGTCACCTTCGCACTGCCAGAGCCAGGC...AGAGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR-3UTR CCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATCAGACCTGTAGTTCCTaGGCCCCACCCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYQTCSS*APPSRA
Trigger: GGCCCTGCTGGGTGGGGCCCAGGAACTACAGGTCTG...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR CAA 90 bp TCCCGAGCAGAGGCTACGGCCTCGCCCTCCCGCACCTTGAGTGCCTaGAGTTCCTCCTGCAGCCTGGCTACATTGTTCTCATCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: SRAEATASPSRTLSA*SSSCSLATLFSSGS
Trigger: ACTGCCAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAGGGCGAGGCCGTAGCCTCTGCTCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CAA 90 bp GTGGCTAGTTCATCTGCATCGCTGTCTGAGCTACCTTCGCTGTCCTaGGCTGGCCGATCCAGGCTTCTGAAGAAGCGCGCGTCCCGGGGA +
Preference number: 2 (lower is better)
Translates to: VASSSASLSELPSLS*AGRSRLLKKRASRG
Trigger: TCCCCGGGACGCGCGCTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTAGCTCAGACAGCGATGCAGATGAACTAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCAGTCCAAGATGCGGGTTaGGGTGGGGTGAAGGGTAAA +
Preference number: 2 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPVQDAG*GGVKGK
Trigger: TTTACCCTTCACCCCACCCCAACCCGCATCTTGGAC...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR CCA 90 bp GCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCTACCAATGCCTGGCTCTaGCAGTGCGAAGGTGACTGC +
Preference number: 2 (lower is better)
Translates to: ALTGVPLPWPPTAGPGSSTNAWL*QCEGDC
Trigger: GCAGTCACCTTCGCACTGCCAGAGCCAGGCATTGGT...AGAGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CAA 90 bp AGCTTTAGCTCCCGAGCAGAGGCTACGGCCTCGCCCTCCCGCACCTaGAGTGCCTTGAGTTCCTCCTGCAGCCTGGCTACATTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: SFSSRAEATASPSRT*SALSSSCSLATLFS
Trigger: TGAGAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAGGGCGAGGCCGTAGCCTCTGCTCGGGAGCTAAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR TCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTTACAGATCTAAGCCCTaGGGGCTAGCAGGCAAGGGT +
Preference number: 2 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFYRSKP*GLAGKG
Trigger: ACCCTTGCCTGCTAGCCCTCAGGGCTTAGATCTGTA...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTAGTTCTGTCTCCAGGTaGGCCACAAAGTCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGSSVSR*ATKSSV
Trigger: CACAGAGGACTTTGTGGCCCACCTGGAGACAGAACT...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CCA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGATTCCTGGGGCTCACCTaGATCTCCAGCTCTGCGATG +
Preference number: 2 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRFLGLT*ISSSAM
Trigger: CATCGCAGAGCTGGAGATCCAGGTGAGCCCCAGGAA...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CCA 90 bp TTGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTGCCAGAACCAATGCCTaGCTCTGGCAGTGCGAAGGT +
Preference number: 2 (lower is better)
Translates to: LLLQEFPCHGLPLLAQVPARTNA*LWQCEG
Trigger: ACCTTCGCACTGCCAGAGCCAGGCATTGGTTCTGGC...AGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR-3UTR TCA 90 bp CCACGCCCAGCAGCTCCTCATCAGAAGATGGTAGCGAATCCTCATCCAGGTGCCCGGCTTTCGCTGAGCTaGGTCTGGAGTCCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: PRPAAPHQKMVANPHPGARLSLS*VWSPLF
Trigger: GAACAAGGGACTCCAGACTCAGCTCAGCGAAAGCCG...GGCACCTGGATGAGGATTCGCTACCATCTTCTGATGAGGAGCTGCTGGGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp TGGCTAGTTCATCTGCATCGCTGTCTGAGCTACCTTCGCTGTCCTTGGCTGGCCCTTGCACTCAGCCTCTaGCTGCTTGCGGCGGCTTTC +
Preference number: 2 (lower is better)
Translates to: WLVHLHRCLSYLRCPWLALALSL*LLAAAF
Trigger: GAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTGCAAG...GGCCAGCCAAGGACAGCGAAGGTAGCTCAGACAGCGATGCAGATGAACTAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTCTTCCTCCTTACTCTTaGACTCAGCCTCTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFLPPYS*TQPLPA
Trigger: AGCAGGCAGAGGCTGAGTGCAAGAGTAAGGAGGAAG...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGTCTCCCTGCCAGCAATaGGGGCCTCCAGGCTCCCCG +
Preference number: 2 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLSPCQQ*GPPGSP
Trigger: CGGGGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGA...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR CCA 90 bp GTGAGTGGGCCCCCAGCTTCAGTTGTCCAGGCCCTGGTTGCTATAAGGAGTGGCTTGAGCTCCTCGATCTaGTCCTTCAGCTCCCGGATG +
Preference number: 2 (lower is better)
Translates to: VSGPPASVVQALVAIRSGLSSSI*SFSSRM
Trigger: CATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAA...GCCACTCCTTATAGCAACCAGGGCCTGGACAACTGAAGCTGGGGGCCCACTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp AGAGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTGCCTTGAGTTCCTCCTaGAGCCTGGCTACATTGTTC +
Preference number: 2 (lower is better)
Translates to: RDFPGLSWFPLTAHTPGGALSSS*SLATLF
Trigger: GAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGC...ACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CCA 90 bp GAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCCTTCACCCTCCAGGTAACTaGCCCACGCACCCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: EEASCLLTSPGASPLSALHPPGN*PTHPLN
Trigger: GTTCAAGGGGTGCGTGGGCCAGTTACCTGGAGGGTG...AAGGGCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR CCA 90 bp GTGAGTGGGCCCCCAGCTTCAGTTGTCCAGGCCCTGGTTGCTATAAGGAGTGGCGTTCCTCCTGCAGCCTaGCTACATTGTTCTCATCTG +
Preference number: 2 (lower is better)
Translates to: VSGPPASVVQALVAIRSGVPPAA*LHCSHL
Trigger: CAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAAC...GCCACTCCTTATAGCAACCAGGGCCTGGACAACTGAAGCTGGGGGCCCACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR TCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCATGCGGCGGCTTTCGCTaGGCTGAGTCTGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPCGGFR*AESGVP
Trigger: AGGGACTCCAGACTCAGCTCAGCGAAAGCCGCCGCA...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGCTCCCGCACCTTGAGTaGCTTGAGTTCCTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWLPHLE*LEFLLQ
Trigger: CTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAG...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGCTGGATCTCCAGCTCTaGGATGCGCTGCCTCATCTC +
Preference number: 2 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGLDLQL*DALPHL
Trigger: GAGATGAGGCAGCGCATCGCAGAGCTGGAGATCCAG...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGGTGTCTGAGAGCTCCTaGAGCTGCAGCTTTAGCTCC +
Preference number: 2 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGVSESS*SCSFSS
Trigger: GGAGCTAAAGCTGCAGCTGCAGGAGCTCTCAGACAC...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp TCTCTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGAGTTCCACCACGCGCTaGCGCCATTCGCGGCCATCG +
Preference number: 2 (lower is better)
Translates to: SLLQPANTCDISTPQRKMSSTTR*RHSRPS
Trigger: CGATGGCCGCGAATGGCGGCAGCGCGTGGTGGAACT...CATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR TCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTTCTCATCTGGCAGTaGGCTGTTTCTCTTTTCCAT +
Preference number: 2 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYVLIWQ*AVSLFH
Trigger: ATGGAAAAGAGAAACAGCTCACTGCCAGATGAGAAC...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CAA 90 bp TCCCGCACCTTGAGTGCCTTGAGTTCCTCCTGCAGCCTGGCTACATaGTTCTCATCTGGCAGTGAGCTGTTTCTCTTTTCCATGTCCAGA +
Preference number: 2 (lower is better)
Translates to: SRTLSALSSSCSLAT*FSSGSELFLFSMSR
Trigger: TCTGGACATGGAAAAGAGAAACAGCTCACTGCCAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR GCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCAGAGGAGGAAGCTTCCTaGTTATTAACAAGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPEEEAS*LLTSPG
Trigger: CCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTC...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR TCA 72 bp TCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCCCGTaGGTGGGCCCCCAGCTTCAGTTGTCCAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: SPCQQCGPPGSP*VGPQLQLSRPW
Trigger: CCAGGGCCTGGACAACTGAAGCTGGGGGCCCACTCACGGGGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp GCGCTGCCGCCATTCGCGGCCATCGGCCAGGGCCTGTaGCTCGCGCAAACGCACAGTCATGAGCTCGTCCTG +
Preference number: 3 (lower is better)
Translates to: ALPPFAAIGQGL*LAQTHSHELVL
Trigger: CAGGACGAGCTCATGACTGTGCGTTTGCGCGAGGCACAGGCCCTGGCCGATGGCCGCGAATGGCGGCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 72 bp TCTGCCGGGAGGGCCGGAGTACTGTCGGTCAGAGCTTaGCCAGCCCCGGGGTTCACCCTCCTCCCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: SAGRAGVLSVRA*PAPGFTLLPVP
Trigger: AGGAACTGGGAGGAGGGTGAACCCCGGGGCTGGCCAAGCTCTGACCGACAGTACTCCGGCCCTCCCGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CAA 90 bp TTGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCAAAGTCCGCTCGCCTaGGCGAGCTGCCCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: LLLQEFPCHGLPLLAQVPQSPLA*ASCPWG
Trigger: CCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTTG...AGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CCA 72 bp TCCCGGATGTACTGCGATGAATCCGAGTGGTTCAGCTaGCCCTGGATGCGGCCCTCCTCCCTCTGCCGGGAG +
Preference number: 3 (lower is better)
Translates to: SRMYCDESEWFS*PWMRPSSLCRE
Trigger: CTCCCGGCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp GGGCCGCGCGTTCCGCCTCCACACGGTTCAGCAGGTTaGGGTGAATGTTGTCCTGCGTCTCCAGTTCCACCA +
Preference number: 3 (lower is better)
Translates to: GPRVPPPHGSAG*GECCPASPVPP
Trigger: TGGTGGAACTGGAGACGCAGGACAACATTCACCGCAACCTGCTGAACCGTGTGGAGGCGGAACGCGCGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp CCCTTGTTCTGTGCTGCCAGGTACTGCAACTTCTCCTaGAGGGCCGCGCGTTCCGCCTCCACACGGTTCAGC +
Preference number: 3 (lower is better)
Translates to: PLFCAARYCNFS*RAARSASTRFS
Trigger: GCTGAACCGTGTGGAGGCGGAACGCGCGGCCCTGCAGGAGAAGTTGCAGTACCTGGCAGCACAGAACAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 72 bp TACCTTCGCTGTCCTTGGCTGGCCGATCCAGGCTTCTaGAGAAGCGCGCGTCCCGGGGAGAGAGAGGGTAGA +
Preference number: 3 (lower is better)
Translates to: YLRCPWLADPGF*RSARPGEREGR
Trigger: TCTACCCTCTCTCTCCCCGGGACGCGCGCTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp CTCCCAGTTCCTGGGGCTCACCTGGATCTCCAGCTCTaGGATGCGCTGCCTCATCTCTGCCACTGCAGCCAT +
Preference number: 3 (lower is better)
Translates to: LPVPGAHLDLQL*DALPHLCHCSH
Trigger: ATGGCTGCAGTGGCAGAGATGAGGCAGCGCATCGCAGAGCTGGAGATCCAGGTGAGCCCCAGGAACTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 72 bp TCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTaGTTCAGCTGGCCCTGGATGCGGCCCTCCTCCCTC +
Preference number: 3 (lower is better)
Translates to: SFSSRMYCDESE*FSWPWMRPSSL
Trigger: GAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 72 bp TCAGCCTCTGCCTGCTTGCGGCGGCTTTCGCTGAGCTaGGTCTGGAGTCCCTTGTTCTGTGCTGCCAGGTAC +
Preference number: 3 (lower is better)
Translates to: SASACLRRLSLS*VWSPLFCAARY
Trigger: GTACCTGGCAGCACAGAACAAGGGACTCCAGACTCAGCTCAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 72 bp CTCGATCTGGTCCTTCAGCTCCCGGATGTACTGCGATaGATCCGAGTGGTTCAGCTGGCCCTGGATGCGGCC +
Preference number: 3 (lower is better)
Translates to: LDLVLQLPDVLR*IRVVQLALDAA
Trigger: GGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp AGCAGAGGCTACGGCCTCGCCCTCCCGCACCTTGAGTaGCTTGAGTTCCTCCTGCAGCCTGGCTACATTGTT +
Preference number: 3 (lower is better)
Translates to: SRGYGLALPHLE*LEFLLQPGYIV
Trigger: AACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAGGGCGAGGCCGTAGCCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 72 bp GAGCCCATCGAAAGCCAGCGGGTCCTCGAATGTCGGTaGGCCTTTCAGCAACCGCACCTCAGTCTTGAGCTC +
Preference number: 3 (lower is better)
Translates to: EPIESQRVLECR*AFQQPHLSLEL
Trigger: GAGCTCAAGACTGAGGTGCGGTTGCTGAAAGGCCCACCGACATTCGAGGACCCGCTGGCTTTCGATGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 72 bp CCCGGGATCCCTAGATGTGGAGCCAGAACCAATGCCTaGCTCTGGCAGTGCGAAGGTGACTGCTGCAGACTG +
Preference number: 3 (lower is better)
Translates to: PGIPRCGARTNA*LWQCEGDCCRL
Trigger: CAGTCTGCAGCAGTCACCTTCGCACTGCCAGAGCCAGGCATTGGTTCTGGCTCCACATCTAGGGATCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR TCA 72 bp GAAGCACCCAGGGAATGCTGTGGGCACCATTCTACTTaGGGCTCTAGGAGCACTGAGAAGGGGTCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: EAPRECCGHHST*GSRSTEKGSAP
Trigger: GGGGGCTGACCCCTTCTCAGTGCTCCTAGAGCCTCAAGTAGAATGGTGCCCACAGCATTCCCTGGGTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR GCA 72 bp GCTTTCGCTGAGCTGAGTCTGGAGTCCCTTGTTCTGTaGTGCCAGGTACTGCAACTTCTCCTGCAGGGCCGC +
Preference number: 3 (lower is better)
Translates to: AFAELSLESLVL*CQVLQLLLQGR
Trigger: GCGGCCCTGCAGGAGAAGTTGCAGTACCTGGCAGCACAGAACAAGGGACTCCAGACTCAGCTCAGCGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp GAGAGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTaGTCACACCCCAGGTGGTATGTCCTGCAGACAGGA +
Preference number: 3 (lower is better)
Translates to: ERLPRSELVPPD*SHPRWYVLQTG
Trigger: TCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR GCA 72 bp TGGCTCTGGCAGTGCGAAGGTGACTGCTGCAGACTGTaGAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCG +
Preference number: 3 (lower is better)
Translates to: WLWQCEGDCCRL*RSILKKPKVRS
Trigger: CGAGCGGACTTTGGGCTTCTTGAGGATGCTCCTGCACAGTCTGCAGCAGTCACCTTCGCACTGCCAGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR-3UTR CAA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGATGCAGCCTGGCTACATaGTTCTCATCTGGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRCSLAT*FSSGSE
Trigger: CTCACTGCCAGATGAGAACAATGTAGCCAGGCTGCA...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR-3UTR CAA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTGGCCCACGCACCCCTaGAACTCAGGAGGGCTTGGA +
Preference number: 3 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGWPTHP*NSGGLG
Trigger: TCCAAGCCCTCCTGAGTTCAAGGGGTGCGTGGGCCA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR TCA 72 bp ATGTCGGTGGGCCTTTCAGCAACCGCACCTCAGTCTTaGGCTCCTCGATCTGGTCCTTCAGCTCCCGGATGT +
Preference number: 3 (lower is better)
Translates to: MSVGLSATAPQS*APRSGPSAPGC
Trigger: ACATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTTGCTGAAAGGCCCACCGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp AGGGCCCCCAGAGTCTCTGTTTCTCGTAACCGTGACTaGTCCAGTTCTGTCTCCAGGTGGGCCACAAAGTCC +
Preference number: 3 (lower is better)
Translates to: RAPRVSVSRNRD*SSSVSRWATKS
Trigger: GGACTTTGTGGCCCACCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGAAACAGAGACTCTGGGGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp TCGCCCTCCCGCACCTTGAGTGCCTTGAGTTCCTCCTaGAGCCTGGCTACATTGTTCTCATCTGGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: SPSRTLSALSSS*SLATLFSSGSE
Trigger: CTCACTGCCAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp AGCTCCTCGATCTGGTCCTTCAGCTCCCGGATGTACTaGGATGAATCCGAGTGGTTCAGCTGGCCCTGGATG +
Preference number: 3 (lower is better)
Translates to: SSSIWSFSSRMY*DESEWFSWPWM
Trigger: CATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp TCCTCATCAGAAGATGGTAGCGAATCCTCATCCAGGTaGCGCGTTAGGCTGAGCCCATCGAAAGCCAGCGGG +
Preference number: 3 (lower is better)
Translates to: SSSEDGSESSSR*RVRLSPSKASG
Trigger: CCCGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACCTGGATGAGGATTCGCTACCATCTTCTGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR GCA 72 bp AGATGTGGAGCCAGAACCAATGCCTGGCTCTGGCAGTaGGAAGGTGACTGCTGCAGACTGTGCAGGAGCATC +
Preference number: 3 (lower is better)
Translates to: RCGARTNAWLWQ*EGDCCRLCRSI
Trigger: GATGCTCCTGCACAGTCTGCAGCAGTCACCTTCGCACTGCCAGAGCCAGGCATTGGTTCTGGCTCCACATCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CCA 72 bp ATCCCTAGATGTGGAGCCAGAACCAATGCCTGGCTCTaGCAGTGCGAAGGTGACTGCTGCAGACTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: IPRCGARTNAWL*QCEGDCCRLCR
Trigger: CCTGCACAGTCTGCAGCAGTCACCTTCGCACTGCCAGAGCCAGGCATTGGTTCTGGCTCCACATCTAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR-3UTR CAA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATAATATCCAGTCCAAGTaGCCCCTCCTTCCTCAGACC +
Preference number: 3 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYNIQSK*PLLPQT
Trigger: GGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATT...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR CCA 72 bp TTGTCCATGTTAGGAGAGCAACACCCTCCAGGTAACTaGCCCACGCACCCCTTGAACTCAGGAGGGCTTGGA +
Preference number: 3 (lower is better)
Translates to: LSMLGEQHPPGN*PTHPLNSGGLG
Trigger: TCCAAGCCCTCCTGAGTTCAAGGGGTGCGTGGGCCAGTTACCTGGAGGGTGTTGCTCTCCTAACATGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR CCA 72 bp GATGCGGGTTGGGGTGGGGTGAAGGGTAAAGGAGCCTaGGGAGCATTGATGGACTTTGGCACCATTCTCAAC +
Preference number: 3 (lower is better)
Translates to: DAGWGGVKGKGA*GALMDFGTILN
Trigger: GTTGAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCCACCCCAACCCGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR-3UTR CAA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGCGCACCTTGAGTGCCTaGAGTTCCTCCTGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLRTLSA*SSSCSL
Trigger: CAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCG...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 72 bp TTCAGCAACCGCACCTCAGTCTTGAGCTCCTCGATCTaGTCCTTCAGCTCCCGGATGTACTGCGATGAATCC +
Preference number: 3 (lower is better)
Translates to: FSNRTSVLSSSI*SFSSRMYCDES
Trigger: GGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTTGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 72 bp CTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTaGGGAGATAAGGGGAGGGAACGGACTGGGAAACTC +
Preference number: 3 (lower is better)
Translates to: LNSDWAETMGIL*GDKGRERTGKL
Trigger: GAGTTTCCCAGTCCGTTCCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR TCA 72 bp AGAACACACGGATGGAGGTTTGGCAACTTCTGGCTGTaGTTCCCCAGCCCTTTGGCTCTCTATTCGGCATCC +
Preference number: 3 (lower is better)
Translates to: RTHGWRFGNFWL*FPSPLALYSAS
Trigger: GGATGCCGAATAGAGAGCCAAAGGGCTGGGGAATCACAGCCAGAAGTTGCCAAACCTCCATCCGTGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
3UTR CCA 72 bp TTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATaGGAATACTCTGAGGAGATAAGGGGAGGGAACGGA +
Preference number: 3 (lower is better)
Translates to: LAPFSTLTGQRP*EYSEEIRGGNG
Trigger: TCCGTTCCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR CCA 72 bp AGCTTCAGTTGTCCAGGCCCTGGTTGCTATAAGGAGTaGCTAGTTCATCTGCATCGCTGTCTGAGCTACCTT +
Preference number: 3 (lower is better)
Translates to: SFSCPGPGCYKE*LVHLHRCLSYL
Trigger: AAGGTAGCTCAGACAGCGATGCAGATGAACTAGCCACTCCTTATAGCAACCAGGGCCTGGACAACTGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR CCA 72 bp CAGCGCTGCTGTGGAAGGCAGACAACTTGCAGGAGTTaGTTCCCTCCTTCACTATGTAGGTTCAAGAGATCA +
Preference number: 3 (lower is better)
Translates to: QRCCGRQTTCRS*FPPSLCRFKRS
Trigger: TGATCTCTTGAACCTACATAGTGAAGGAGGGAACCAACTCCTGCAAGTTGTCTGCCTTCCACAGCAGCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CCA 72 bp GGTTTGGCAACTTCTGGCTGTGATTCCCCAGCCCTTTaGCTCTCTATTCGGCATCCCTTAGGACTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: GLATSGCDSPAL*LSIRHPLGLCK
Trigger: TTTACACAGTCCTAAGGGATGCCGAATAGAGAGCCAAAGGGCTGGGGAATCACAGCCAGAAGTTGCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
3UTR GCA 72 bp AGGAAGATGGGTGCTCTAGGGAAAGGGTTTCTTCTTTaGAGCTTCTATAGCCCTAGAGAGTGGGGAGAGACT +
Preference number: 3 (lower is better)
Translates to: RKMGALGKGFLL*SFYSPREWGET
Trigger: AGTCTCTCCCCACTCTCTAGGGCTATAGAAGCTGCAAAGAAGAAACCCTTTCCCTAGAGCACCCATCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
3UTR TCA 72 bp CTCCTGCAGCCTGGCTACATTGTTCTCATCTGGCAGTaGGCTGTTTCTCTTTTCCATGTCCAGAACTTTGTC +
Preference number: 3 (lower is better)
Translates to: LLQPGYIVLIWQ*AVSLFHVQNFV
Trigger: GACAAAGTTCTGGACATGGAAAAGAGAAACAGCTCACTGCCAGATGAGAACAATGTAGCCAGGCTGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
3UTR TCA 72 bp AAGAGATCAAACAGTGGTGGTGAGGTTCAGGTCTGGTaGCAAGTGCTCCTCTTAACCAGGGAGCAATCTTTC +
Preference number: 3 (lower is better)
Translates to: KRSNSGGEVQVW*QVLLLTREQSF
Trigger: GAAAGATTGCTCCCTGGTTAAGAGGAGCACTTGTCACCAGACCTGAACCTCACCACCACTGTTTGATCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CAA 72 bp CTCTGCCGGGAGGGCCGGAGTACTGTCGGTCAGAGCTaGGCCAGCCCCGGGGTTCACCCTCCTCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LCREGRSTVGQS*ASPGVHPPPSS
Trigger: GGAACTGGGAGGAGGGTGAACCCCGGGGCTGGCCAAGCTCTGACCGACAGTACTCCGGCCCTCCCGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CCA 90 bp CTGCGTCTCCAGTTCCACCACGCGCTGCCGCCATTCGCGGCCATCGGCCAGGGCTGGAGCGCATGGACTTaGAGTCGGCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRLQFHHALPPFAAIGQGWSAWT*SRLPGA
Trigger: GGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCA...GCCCTGGCCGATGGCCGCGAATGGCGGCAGCGCGTGGTGGAACTGGAGACGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR TCA 90 bp TCTGCCGGGAGGGCCGGAGTACTGTCGGTCAGAGCTTGGCCAGCCCCGGGGTTCCAGGGCCTCTTGAGATaGGGAGTCCGGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SAGRAGVLSVRAWPAPGFQGLLR*GVRAQS
Trigger: ACTCTGAGCCCGGACTCCTCATCTCAAGAGGCCCTG...GAACCCCGGGGCTGGCCAAGCTCTGACCGACAGTACTCCGGCCCTCCCGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR TCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCCGGCCATGCTGGGCTTaGAGAGCTCCCGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFRPCWA*RAPVAG
Trigger: ACCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCG...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCCTGGGGGCCCGGCCTCCCCACAGGGTaGCTGGACTTCGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: HPQEAQSPLALASCPWGPGLPTG*LDFAVL
Trigger: AAGGACAGCGAAGTCCAGTCACCCTGTGGGGAGGCC...GGGCCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTTGGGCTTCTTGAGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR GCA 90 bp TCTGCCGGGAGGGCCGGAGTACTGTCGGTCAGAGCTTGGCCAGCCCCGGGGTTCGCACTGCACAGGAGCTaGCAGACGATGGCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SAGRAGVLSVRAWPAPGFALHRS*QTMARK
Trigger: CTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGC...GAACCCCGGGGCTGGCCAAGCTCTGACCGACAGTACTCCGGCCCTCCCGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR GCA 90 bp CTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTGACTAGGAGGAGTTCCACCACGCGCTaGCGCCATTCGCGGCCATCG +
Preference number: 4 (lower is better)
Translates to: LGPTQQGLPCPKGKLTRRSSTTR*RHSRPS
Trigger: CGATGGCCGCGAATGGCGGCAGCGCGTGGTGGAACT...CCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCTGGTTCAGCTGGCCCTaGATGCGGCCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSWFSWP*MRPSSL
Trigger: GAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCA...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCTCCGAGTGGTTCAGCTaGCCCTGGATGCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSSEWFS*PWMRPS
Trigger: GGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGA...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGCGGCCATGCTGGGCTTaGAGAGCTCCCGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGRPCWA*RAPVAG
Trigger: ACCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCG...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTAGTTCCACCACGCGCTaGCGCCATTCGCGGCCATCG +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGSSTTR*RHSRPS
Trigger: CGATGGCCGCGAATGGCGGCAGCGCGTGGTGGAACT...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATCAGCTGGCCCTGGATaGGGCCCTCCTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPSAGPG*GPPPSG
Trigger: TCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGA...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGACTCCTCAGCCTCCTGTaGCCGTGTCACCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRLLSLL*PCHLPL
Trigger: CAGGGGCAGGTGACACGGGCACAGGAGGCTGAGGAG...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000176149.9
CDS-3UTR GCA 90 bp CATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCCTGGGGGCCCAGCAGCTGCAGAAGGTaGAGCTGTGGGCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HPQEAQSPLALASCPWGPSSCRR*SCGLRR
Trigger: CCTTCGCAGCCCACAGCTGCACCTTCTGCAGCTGCT...GGGCCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTTGGGCTTCTTGAGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCAGAGAGAGGGTAGAGTaGGTCCTGCAGGGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSRERVE*VLQGCA
Trigger: GGCGCAGCCCTGCAGGACCCACTCTACCCTCTCTCT...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCAGGGCCTCTTGAGATaGGGAGTCCGGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GNGAGGPTQEAPRECCGHQGLLR*GVRAQS
Trigger: ACTCTGAGCCCGGACTCCTCATCTCAAGAGGCCCTG...GTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTGCTGACAGGGCCTCTTaGGATGAGGAGTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGADRAS*DEESGL
Trigger: GAGCCCGGACTCCTCATCTCAAGAGGCCCTGTCAGC...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCGGAGCTGGATACCAGTaGGGAGCCACTGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSGAGYQ*GATVPP
Trigger: CGGAGGAACAGTGGCTCCTCACTGGTATCCAGCTCC...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGATGCGGCGGCTTTCGCTaGGCTGAGTCTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRCGGFR*AESGVP
Trigger: AGGGACTCCAGACTCAGCTCAGCGAAAGCCGCCGCA...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCTCCAGGAGCCGGTTCTaGTCCTCGAGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSSRSRF*SSSLAS
Trigger: ACTGGCCAAGCTCGAGGAGCAGAACCGGCTCCTGGA...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTGACTAGGAGGTCCAGGAGCCGGTTCTaGTCCTCGAGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LGPTQQGLPCPKGKLTRRSRSRF*SSSLAS
Trigger: ACTGGCCAAGCTCGAGGAGCAGAACCGGCTCCTGGA...CCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp TCGCTGTCCTTGGCTGGCCGATCCAGGCTTCTGAAGAAGCGCGCGTCCCGGGGATCCAGGAGCCGGTTCTaGTCCTCGAGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLSLAGRSRLLKKRASRGSRSRF*SSSLAS
Trigger: ACTGGCCAAGCTCGAGGAGCAGAACCGGCTCCTGGA...TCCCCGGGACGCGCGCTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR GCA 90 bp GCAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCGCACTGCACAGGAGCTaGCAGACGATGGCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ASSRTADLSLPAMRASRLALHRS*QTMARK
Trigger: CTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGC...GAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCACGATGGCCCGAAAGTaGTGTGGGATGCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFTMARK*CGMPFR
Trigger: CCGGAAGGGCATCCCACACCACTTTCGGGCCATCGT...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTTCCGAGTGGTTCAGCTaGCCCTGGATGCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGASEWFS*PWMRPS
Trigger: GGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGA...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GCAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCGGAGTAAGCCCACAATaGAGGCACTGCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ASSRTADLSLPAMRASRLGVSPQ*RHCPGS
Trigger: ACTGCCAGGGCAGTGCCTTCATTGTGGGCTTACTCC...GAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGATCCAGGAGCCGGTTCTaGTCCTCGAGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRSRSRF*SSSLAS
Trigger: ACTGGCCAAGCTCGAGGAGCAGAACCGGCTCCTGGA...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTGCACTGCACAGGAGCTaGCAGACGATGGCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGALHRS*QTMARK
Trigger: CTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGC...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCCTCCCGCACCTTGAGTaGCTTGAGTTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSLPHLE*LEFLLQ
Trigger: CTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAG...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCAGTTCCACCACGCGCTaGCGCCATTCGCGGCCATCG +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPSSTTR*RHSRPS
Trigger: CGATGGCCGCGAATGGCGGCAGCGCGTGGTGGAACT...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGCACTCAGCCTCTGCCTaGTTGCGGCGGCTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWHSASA*LRRLSL
Trigger: CAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTG...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACTTGAAGAGGACTTCCTaGCCCAGGCTGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GNGAGGPTQEAPRECCGHLKRTS*PRLSWP
Trigger: AGGCCAGGACAGCCTGGGCCAGGAAGTCCTCTTCAA...GTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCTATCAAAGACCCGGGTaGCAACAGGCAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFYQRPG*QQAGGR
Trigger: CCTTCCCCCTGCCTGTTGCCACCCGGGTCTTTGATA...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCTATCAAAGACCCGGGTaGCAACAGGCAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSYQRPG*QQAGGR
Trigger: CCTTCCCCCTGCCTGTTGCCACCCGGGTCTTTGATA...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTGACTAGGAGGGGGCAGCTGTCAAACTaGTGGGGGATGACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGPTQQGLPCPKGKLTRRGQLSN*WGMTLW
Trigger: CCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCC...CCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCAGAGAGAGGGTAGAGTaGGTCCTGCAGGGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: CSYRSSPAMASHCWPRFLRERVE*VLQGCA
Trigger: GGCGCAGCCCTGCAGGACCCACTCTACCCTCTCTCT...GAGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CCA 90 bp TGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCCAGGAGGCTCAGGGGTaGGTGGTGTCTCGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CSYRSSPAMASHCWPRFLQEAQG*VVSRED
Trigger: ATCCTCCCGAGACACCACCCACCCCTGAGCCTCCTG...GAGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR TCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCAGGAGTAAGCCCACAATaGAGGCACTGCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPGVSPQ*RHCPGS
Trigger: ACTGCCAGGGCAGTGCCTTCATTGTGGGCTTACTCC...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTGGAGTAAGCCCACAATaGAGGCACTGCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTIGVSPQ*RHCPGS
Trigger: ACTGCCAGGGCAGTGCCTTCATTGTGGGCTTACTCC...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGAGGAGTAAGCCCACAATaGAGGCACTGCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRGVSPQ*RHCPGS
Trigger: ACTGCCAGGGCAGTGCCTTCATTGTGGGCTTACTCC...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCCGTGTGGAAGCTCTGTaGGCGGAAGTGGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSRVEAL*AEVGIQ
Trigger: CTGAATACCCACTTCCGCTCACAGAGCTTCCACACG...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCACGGCTTTCGCTGAGCTaGGTCTGGAGTCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPRLSLS*VWSPLF
Trigger: GAACAAGGGACTCCAGACTCAGCTCAGCGAAAGCCG...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CCCCACCCCGGGATCCCTAGATGTGGAGCCAGAACCAATGCCTGGCTCTGGCAGACCGCACCTCAGTCTTaGGCTCCTCGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PHPGIPRCGARTNAWLWQTAPQS*APRSGP
Trigger: AGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGT...CTGCCAGAGCCAGGCATTGGTTCTGGCTCCACATCTAGGGATCCCGGGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR TCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTACCGCACCTCAGTCTTaGGCTCCTCGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTITAPQS*APRSGP
Trigger: AGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGT...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGGTGCCGCGTTAGGCTaGGCCCATCGAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYGAALG*AHRKPA
Trigger: CGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACC...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCGTAGTTTTTCCTTCCTaGGCCGCCACTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSVVFPS*AATPPT
Trigger: AGTGGGAGGAGTGGCGGCGCAGGAAGGAAAAACTAC...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGAATCGGCCAGGGCCTGTaGCTCGCGCAAACGCACAGT +
Preference number: 4 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRIGQGL*LAQTHS
Trigger: ACTGTGCGTTTGCGCGAGGCACAGGCCCTGGCCGAT...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCGCTGCCTCATCTCTaGCACTGCAGCCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWALPHL*HCSHAV
Trigger: GACAGCATGGCTGCAGTGGCAGAGATGAGGCAGCGC...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTTCTCCAGCTCTGCGATaGGCTGCCTCATCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGSPALR*AASSLP
Trigger: TGGCAGAGATGAGGCAGCGCATCGCAGAGCTGGAGA...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCTGGCCGCTGGGCCGAATTaGTGTCTCCCTTGGACGAGT +
Preference number: 4 (lower is better)
Translates to: LLQEFPCHGLPLLAQVPLAAGPN*CLPWTS
Trigger: ACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGC...CAGAGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTTGGAGCGCATGGACTTaGAGTCGGCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFWSAWT*SRLPGA
Trigger: GGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCA...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GCAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCTCCGGGAGCCATTCATaGAGCGCATGGACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: ASSRTADLSLPAMRASRLSGSHS*SAWTWS
Trigger: ACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGA...GAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTTATCAAAGACCCGGGTaGCAACAGGCAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGYQRPG*QQAGGR
Trigger: CCTTCCCCCTGCCTGTTGCCACCCGGGTCTTTGATA...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTGGGCAGCTGTCAAACTaGTGGGGGATGACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGGQLSN*WGMTLW
Trigger: CCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCC...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GCAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCTGCGATGAATCCGAGTaGTTCAGCTGGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ASSRTADLSLPAMRASRLCDESE*FSWPWM
Trigger: CATCCAGGGCCAGCTGAACCACTCGGATTCATCGCA...GAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCTTGAGCTCCTCGATCTaGTCCTTCAGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFLSSSI*SFSSRM
Trigger: CATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAA...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGTACCTTCGCTGTCCTTaGCTGGCCGATCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGYLRCP*LADPGF
Trigger: GAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTA...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCCAGGGCCTCTTGAGATaGGGAGTCCGGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPQGLLR*GVRAQS
Trigger: ACTCTGAGCCCGGACTCCTCATCTCAAGAGGCCCTG...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCTAGCTCATCTGGGCTaGGATTCTCGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTILAHLG*DSRSQR
Trigger: CCTCTGACTCCGAGAATCTCAGCCCAGATGAGCTAG...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCATGGGGAGGACATCTTaGGGAGCTCAGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFMGRTS*GAQSTG
Trigger: ACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCAT...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCACGTGTGGAAGCTCTGTaGGCGGAAGTGGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPRVEAL*AEVGIQ
Trigger: CTGAATACCCACTTCCGCTCACAGAGCTTCCACACG...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCAAACTGGTGGGGGATaGCTCTCTGGAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTIQTGGG*LSGSTG
Trigger: CCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTG...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTCGGCTTTCGCTGAGCTaGGTCTGGAGTCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFRLSLS*VWSPLF
Trigger: GAACAAGGGACTCCAGACTCAGCTCAGCGAAAGCCG...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCTGCGGCGGCTTTCGCTaGGCTGAGTCTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSCGGFR*AESGVP
Trigger: AGGGACTCCAGACTCAGCTCAGCGAAAGCCGCCGCA...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CCCCACCCCGGGATCCCTAGATGTGGAGCCAGAACCAATGCCTGGCTCTGGCAGCCGGATGTACTGCGATaGATCCGAGTGGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PHPGIPRCGARTNAWLWQPDVLR*IRVVQL
Trigger: CAGCTGAACCACTCGGATTCATCGCAGTACATCCGG...CTGCCAGAGCCAGGCATTGGTTCTGGCTCCACATCTAGGGATCCCGGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR TCA 90 bp GCAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCGTACTCTGTGCTTTCTaGAGGTCCTCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: ASSRTADLSLPAMRASRLVLCAF*RSSAVE
Trigger: CTCGACTGCAGAGGACCTTCAGAAAGCACAGAGTAC...GAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCAGTAGTTTTTCCTTCCTaGGCCGCCACTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPVVFPS*AATPPT
Trigger: AGTGGGAGGAGTGGCGGCGCAGGAAGGAAAAACTAC...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAGTACTGTCGGTCAGAGCTTGGCCAGCCCCGGGGTTCACCCTCCTCCCAGTTCGCATATCTGTGGCACTaGACAGGAGCTGCCAGACGA +
Preference number: 4 (lower is better)
Translates to: EYCRSELGQPRGSPSSQFAYLWH*TGAARR
Trigger: TCGTCTGGCAGCTCCTGTGCAGTGCCACAGATATGC...GAACTGGGAGGAGGGTGAACCCCGGGGCTGGCCAAGCTCTGACCGACAGTACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR GCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCATCGGCCAGGGCCTGTaGCTCGCGCAAACGCACAGT +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSIGQGL*LAQTHS
Trigger: ACTGTGCGTTTGCGCGAGGCACAGGCCCTGGCCGAT...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCCTTCCTCCTTACTCTTaGACTCAGCCTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFLPPYS*TQPLPA
Trigger: AGCAGGCAGAGGCTGAGTGCAAGAGTAAGGAGGAAG...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGTCTCCAGCTCTGCGATaGGCTGCCTCATCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWSPALR*AASSLP
Trigger: TGGCAGAGATGAGGCAGCGCATCGCAGAGCTGGAGA...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCAGCTCCCGGATGTACTaGGATGAATCCGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSSSRMY*DESEWF
Trigger: GAACCACTCGGATTCATCGCAGTACATCCGGGAGCT...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCCATTCATGGAGCGCATaGACTTGGAGTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFHSWSA*TWSRLP
Trigger: TGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATG...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCATGGAGCGCATaGACTTGGAGTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNGAGGPTQEAPRECCGHHSWSA*TWSRLP
Trigger: TGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATG...GTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGATCCGGGAGCCATTCATaGAGCGCATGGACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRSGSHS*SAWTWS
Trigger: ACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGA...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGTCCGGGAGCCATTCATaGAGCGCATGGACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGSGSHS*SAWTWS
Trigger: ACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGA...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCACGATGGCCCGAAAGTaGTGTGGGATGCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPTMARK*CGMPFR
Trigger: CCGGAAGGGCATCCCACACCACTTTCGGGCCATCGT...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGTTGAAGAGGACTTCCTaGCCCAGGCTGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWLKRTS*PRLSWP
Trigger: AGGCCAGGACAGCCTGGGCCAGGAAGTCCTCTTCAA...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCGCATACATGGACGTGTaGAAGCTCTGTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSAYMDV*KLCERK
Trigger: CTTCCGCTCACAGAGCTTCCACACGTCCATGTATGC...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCCAGCTGTCAAACTGGTaGGGGATGACTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFQLSNW*GMTLWK
Trigger: CTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTG...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTGGGCAGCTGTCAAACTaGTGGGGGATGACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFGQLSN*WGMTLW
Trigger: CCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCC...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGAGGACCAGCTTGTCTaGGCAGCTGTCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGEDQLV*AAVKLV
Trigger: CACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTC...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGATTGAGCTCCTCGATCTaGTCCTTCAGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRLSSSI*SFSSRM
Trigger: CATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAA...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCGCTGACAGGGCCTCTTaGGATGAGGAGTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGADRAS*DEESGL
Trigger: GAGCCCGGACTCCTCATCTCAAGAGGCCCTGTCAGC...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCTCCGGATCAGCTCCTTaGGTAGTTTTTCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSSGSAP*VVFPSC
Trigger: GCAGGAAGGAAAAACTACTCAAGGAGCTGATCCGGA...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTGGCTGTCCTGGCCTTTaGAGAATTCATGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTIGCPGL*RIHALG
Trigger: ACCCAGAGCATGAATTCTTCAAAGGCCAGGACAGCC...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGGGTGAAGGGTAAAGGAGCCTGGGGAGCATTGATGGACTTTGGCACCATTCTCCGGCCATGCTGGGCTTaGAGAGCTCCCGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GVKGKGAWGALMDFGTILRPCWA*RAPVAG
Trigger: ACCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCG...GAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTCGTGTGGAAGCTCTGTaGGCGGAAGTGGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFRVEAL*AEVGIQ
Trigger: CTGAATACCCACTTCCGCTCACAGAGCTTCCACACG...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGCAAACTGGTGGGGGATaGCTCTCTGGAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWQTGGG*LSGSTG
Trigger: CCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTG...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTGACTAGGAGGCTGTTCGAAGCCTTTTaGTCTCGATCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGPTQQGLPCPKGKLTRRLFEAF*SRSAPP
Trigger: TGGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAG...CCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTTCTCAATCCGCTGTTTaGGCAGCCGGTTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTISQSAV*AAGSLF
Trigger: GAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGA...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTTCTCAATCCGCTGTTTaGGCAGCCGGTTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGSQSAV*AAGSLF
Trigger: GAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGA...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGATCTCAATCCGCTGTTTaGGCAGCCGGTTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRSQSAV*AAGSLF
Trigger: GAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGA...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTATCTGCATCGCTGTCTaGGCTACCTTCGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGICIAV*ATFAVL
Trigger: AAGGACAGCGAAGGTAGCTCAGACAGCGATGCAGAT...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCAGTACTCTGTGCTTTCTaGAGGTCCTCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPVLCAF*RSSAVE
Trigger: CTCGACTGCAGAGGACCTTCAGAAAGCACAGAGTAC...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTGTAGTTTTTCCTTCCTaGGCCGCCACTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGAVVFPS*AATPPT
Trigger: AGTGGGAGGAGTGGCGGCGCAGGAAGGAAAAACTAC...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTGTAGTTTTTCCTTCCTaGGCCGCCACTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFVVFPS*AATPPT
Trigger: AGTGGGAGGAGTGGCGGCGCAGGAAGGAAAAACTAC...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTGCATATCTGTGGCACTaGACAGGAGCTGCCAGACGA +
Preference number: 4 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGAAYLWH*TGAARR
Trigger: TCGTCTGGCAGCTCCTGTGCAGTGCCACAGATATGC...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCGTAGCCGGTACTCCTaGATCAGTCGCACGAATACA +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTIRSRYS*ISRTNT
Trigger: TGTATTCGTGCGACTGATGCAGGAGTACCGGCTACG...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATCTGTCTGGTTCACTTaGAGCAGGGCAAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPSVWFT*SRARPT
Trigger: AGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGA...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGAGGAAGTACTGGGACATaGCCTCCATGTCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRGSTGT*PPCPVA
Trigger: TGCAACTGGACATGGAGGGCATGTCCCAGTACTTCC...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGTCTCGTAACCGTGACTaGTCCAGTTCTGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGSRNRD*SSSVSR
Trigger: CCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGA...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGAGCCTTGAGTTCCTCCTaGAGCCTGGCTACATTGTTC +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRALSSS*SLATLF
Trigger: GAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGC...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACTGGATCTCCAGCTCTaGGATGCGCTGCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRLDLQL*DALPHL
Trigger: GAGATGAGGCAGCGCATCGCAGAGCTGGAGATCCAG...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTAGCTCCCGGATGTACTaGGATGAATCCGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGSSRMY*DESEWF
Trigger: GAACCACTCGGATTCATCGCAGTACATCCGGGAGCT...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCTGTCCAGGCCCTGGTTaGTATAAGGAGTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSCPGPG*YKEWLV
Trigger: AACTAGCCACTCCTTATAGCAACCAGGGCCTGGACA...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCCCGAATGGTACTCTGTaGTTTCTGAAGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QARGLLISPCQQCGPPGSPNGTL*FLKVLC
Trigger: GCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGG...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCCCGAATGGTACTCTGTaGTTTCTGAAGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFPNGTL*FLKVLC
Trigger: GCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGG...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGCCCAGGTTCCTCTGATGGCCTGTGCACCATCTACGAATCTGAAGGACCAGAGGGTGCAGCTGTGGGCTaGGAAGGCAGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPGSSDGLCTIYESEGPEGAAVG*EGSSGG
Trigger: GCCTCCTGAACTGCCTTCGCAGCCCACAGCTGCACC...CTCTGGTCCTTCAGATTCGTAGATGGTGCACAGGCCATCAGAGGAACCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CCA 90 bp AGAGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTAGGAGGCTGAGGAGCTaGATACCAGTGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RDFPGLSWFPLTAHTPGGRRLRS*IPVRSH
Trigger: GTGGCTCCTCACTGGTATCCAGCTCCTCAGCCTCCT...ACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGACTCCTCCCACTCGTTaGCAATTCGGCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWTPPTR*QFGPRE
Trigger: TTCTCTGGGGCCGAATTGCCAACGAGTGGGAGGAGT...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCATACATGGACGTGTaGAAGCTCTGTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGAYMDV*KLCERK
Trigger: CTTCCGCTCACAGAGCTTCCACACGTCCATGTATGC...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCACAGCTGTCAAACTGGTaGGGGATGACTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPQLSNW*GMTLWK
Trigger: CTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTG...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCGTTCCTCCTGCAGCCTaGCTACATTGTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFVPPAA*LHCSHL
Trigger: CAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAAC...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GCTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCTCCCCACAGGGTGACTaGACTTCGCTGTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AADCAGASSRSPKSARLGSPQGD*TSLSLA
Trigger: AGCCAAGGACAGCGAAGTCCAGTCACCCTGTGGGGA...GCCAAGGCGAGCGGACTTTGGGCTTCTTGAGGATGCTCCTGCACAGTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CCA 90 bp GCTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCCAGAAGGTGCAGCTGTaGGCTGCGAAGGCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: AADCAGASSRSPKSARLGQKVQL*AAKAVQ
Trigger: CTGAACTGCCTTCGCAGCCCACAGCTGCACCTTCTG...GCCAAGGCGAGCGGACTTTGGGCTTCTTGAGGATGCTCCTGCACAGTCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CAA 72 bp TCATCTGCATCGCTGTCTGAGCTACCTTCGCTGTCCTaGGCTGGCCGATCCAGGCTTCTGAAGAAGCGCGCG +
Preference number: 4 (lower is better)
Translates to: SSASLSELPSLS*AGRSRLLKKRA
Trigger: CGCGCGCTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTAGCTCAGACAGCGATGCAGATGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR TCA 90 bp AGAGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTCTAGCTCATCTGGGCTaGGATTCTCGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RDFPGLSWFPLTAHTPGGLAHLG*DSRSQR
Trigger: CCTCTGACTCCGAGAATCTCAGCCCAGATGAGCTAG...ACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTCAGAGTACTGGTTTTTaGCGGGCATATCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGQSTGF*RAYLWH
Trigger: GTGCCACAGATATGCCCGTCAAAAACCAGTACTCTG...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGCGGCCATGCTGGGCTTaGAGAGCTCCCGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGRPCWA*RAPVAG
Trigger: ACCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCG...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AGAGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTCAAACTGGTGGGGGATaGCTCTCTGGAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: RDFPGLSWFPLTAHTPGGQTGGG*LSGSTG
Trigger: CCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTG...ACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCCTTTGCGGCGGCTTTCGCTaGGCTGAGTCTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: EEASCLLTSPGASPLSALCGGFR*AESGVP
Trigger: AGGGACTCCAGACTCAGCTCAGCGAAAGCCGCCGCA...AAGGGCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCACCGCACCTCAGTCTTaGGCTCCTCGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSTAPQS*APRSGP
Trigger: AGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGT...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGGGTGCCGCGTTAGGCTaGGCCCATCGAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWGAALG*AHRKPA
Trigger: CGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACC...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTCGTAGCCGGTACTCCTaGATCAGTCGCACGAATACA +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFRSRYS*ISRTNT
Trigger: TGTATTCGTGCGACTGATGCAGGAGTACCGGCTACG...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCAAGGAACCAGGACGATaGATACATGGACGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFKEPGR*IHGRVE
Trigger: TTCCACACGTCCATGTATGCATCGTCCTGGTTCCTT...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTCCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGPSMSS*INSVWF
Trigger: GAACCAGACAGAGTTGATGCAACTGGACATGGAGGG...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGGAAGTACTGGGACATaGCCTCCATGTCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWGSTGT*PPCPVA
Trigger: TGCAACTGGACATGGAGGGCATGTCCCAGTACTTCC...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCTGCAGCCATGCTGTCTaGCTCCCGAAGTCGAACAGC +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSCSHAV*LPKSNS
Trigger: GCTGTTCGACTTCGGGAGGCAGACAGCATGGCTGCA...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAACAGGCAGTGTGCAAAATGGTGGTGGGCAGTGTGGAGGGGCACATGAGGAGCCTGGATCTCCAGCTCTaGGATGCGCTGCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: EQAVCKMVVGSVEGHMRSLDLQL*DALPHL
Trigger: GAGATGAGGCAGCGCATCGCAGAGCTGGAGATCCAG...GCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCACACTGCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CCTCGATCTGGTCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTGGTTCACTCCTCAGCCTCCTGTaGCCGTGTCACCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PRSGPSAPGCTAMNPSGSLLSLL*PCHLPL
Trigger: AAGGGGCAGGTGACACGGGCACAGGAGGCTGAGGAG...TGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR GCA 90 bp ACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCCGAATGGTACTCTGTaGTTTCTGAAGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TELEAPPRKHPGNAVGTIPNGTL*FLKVLC
Trigger: GCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGG...AATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTAGGCGAGGGTTTTCCTaGTGTTCTTGCAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFRRGFS*CSCNCR
Trigger: TCGGCAGTTGCAAGAACAGCAGGAAAACCCTCGCCT...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCAGGAGGCTGAGGAGCTaGATACCAGTGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSRRLRS*IPVRSH
Trigger: GTGGCTCCTCACTGGTATCCAGCTCCTCAGCCTCCT...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATAGGAGGCTGAGGAGCTaGATACCAGTGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYRRLRS*IPVRSH
Trigger: GTGGCTCCTCACTGGTATCCAGCTCCTCAGCCTCCT...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCACTCCTCCCACTCGTTaGCAATTCGGCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPTPPTR*QFGPRE
Trigger: TTCTCTGGGGCCGAATTGCCAACGAGTGGGAGGAGT...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GAACAGGCAGTGTGCAAAATGGTGGTGGGCAGTGTGGAGGGGCACATGAGGAGCTATCAAAGACCCGGGTaGCAACAGGCAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EQAVCKMVVGSVEGHMRSYQRPG*QQAGGR
Trigger: CCTTCCCCCTGCCTGTTGCCACCCGGGTCTTTGATA...GCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCACACTGCCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGCINSV*FTCSRA
Trigger: TGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCA...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGCINSV*FTCSRA
Trigger: TGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCA...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GCAGGAGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGTGGTTCAGCTGGCCCTaGATGCGGCCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AGVTEAQNSLVLWSSKLAWFSWP*MRPSSL
Trigger: GAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCA...CGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGATGCGATGAATCCGAGTaGTTCAGCTGGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRCDESE*FSWPWM
Trigger: CATCCAGGGCCAGCTGAACCACTCGGATTCATCGCA...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGGGTGAAGGGTAAAGGAGCCTGGGGAGCATTGATGGACTTTGGCACCATTCTCAGAGAGAGGGTAGAGTaGGTCCTGCAGGGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GVKGKGAWGALMDFGTILRERVE*VLQGCA
Trigger: GGCGCAGCCCTGCAGGACCCACTCTACCCTCTCTCT...GAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp AGTCCCCACATTTGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGTCTCCCCAGATGATGTaGCCTCCCCACAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: SPHICSYRSSPAMASHCWSPQMM*PPHRVT
Trigger: AGTCACCCTGTGGGGAGGCCACATCATCTGGGGAGA...CCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCAAATGTGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR TCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGGCTGACAGGGCCTCTTaGGATGAGGAGTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWADRAS*DEESGL
Trigger: GAGCCCGGACTCCTCATCTCAAGAGGCCCTGTCAGC...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGGGTGAAGGGTAAAGGAGCCTGGGGAGCATTGATGGACTTTGGCACCATTCTCGGAGCTGGATACCAGTaGGGAGCCACTGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GVKGKGAWGALMDFGTILGAGYQ*GATVPP
Trigger: CGGAGGAACAGTGGCTCCTCACTGGTATCCAGCTCC...GAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GAATGGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGTCCGGATCAGCTCCTTaGGTAGTTTTTCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EWKRSWRPHPGSTQGMLWSGSAP*VVFPSC
Trigger: GCAGGAAGGAAAAACTACTCAAGGAGCTGATCCGGA...CCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CGCAAACGCACAGTCATGAGCTCGTCCTGTAACTCGCCCAGGACCAACTTCCGCCGTGTGGAAGCTCTGTaGGCGGAAGTGGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: RKRTVMSSSCNSPRTNFRRVEAL*AEVGIQ
Trigger: CTGAATACCCACTTCCGCTCACAGAGCTTCCACACG...GCGGAAGTTGGTCCTGGGCGAGTTACAGGACGAGCTCATGACTGTGCGTTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR TCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCCAAACTGGTGGGGGATaGCTCTCTGGAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSQTGGG*LSGSTG
Trigger: CCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTG...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATCCGGATGTACTGCGATaGATCCGAGTGGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYPDVLR*IRVVQL
Trigger: CAGCTGAACCACTCGGATTCATCGCAGTACATCCGG...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GAACAGGCAGTGTGCAAAATGGTGGTGGGCAGTGTGGAGGGGCACATGAGGAGCCCGGATGTACTGCGATaGATCCGAGTGGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: EQAVCKMVVGSVEGHMRSPDVLR*IRVVQL
Trigger: CAGCTGAACCACTCGGATTCATCGCAGTACATCCGG...GCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCACACTGCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCCCGGATGTACTGCGATaGATCCGAGTGGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSPDVLR*IRVVQL
Trigger: CAGCTGAACCACTCGGATTCATCGCAGTACATCCGG...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GCAATCTTTCTAGTCCCCACATTTGCTCTTACAGGAGTTCCCCTGCCATGGCCTGGTGCCGCGTTAGGCTaGGCCCATCGAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: AIFLVPTFALTGVPLPWPGAALG*AHRKPA
Trigger: CGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACC...AGGCCATGGCAGGGGAACTCCTGTAAGAGCAAATGTGGGGACTAGAAAGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR GCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGCATATCTGTGGCACTaGACAGGAGCTGCCAGACGA +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYAYLWH*TGAARR
Trigger: TCGTCTGGCAGCTCCTGTGCAGTGCCACAGATATGC...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGAAAGGAACCAGGACGATaGATACATGGACGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRKEPGR*IHGRVE
Trigger: TTCCACACGTCCATGTATGCATCGTCCTGGTTCCTT...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCGGAAGTACTGGGACATaGCCTCCATGTCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPGSTGT*PPCPVA
Trigger: TGCAACTGGACATGGAGGGCATGTCCCAGTACTTCC...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTGACTAGGAGGTTTACTCTTCATAGCTaGGTACTCCTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGPTQQGLPCPKGKLTRRFTLHS*VLLLQP
Trigger: AGGCTGGAGAAGGAGTACGCAGCTATGAAGAGTAAA...CCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCGCCTTGAGTTCCTCCTaGAGCCTGGCTACATTGTTC +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPALSSS*SLATLF
Trigger: GAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGC...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAACAGGCAGTGTGCAAAATGGTGGTGGGCAGTGTGGAGGGGCACATGAGGAGCGTGTCTGAGAGCTCCTaGAGCTGCAGCTTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: EQAVCKMVVGSVEGHMRSVSESS*SCSFSS
Trigger: GGAGCTAAAGCTGCAGCTGCAGGAGCTCTCAGACAC...GCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCACACTGCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTGAGTCCCTTGTTCTGTaGTGCCAGGTACTGCAACTT +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFESLVL*CQVLQL
Trigger: AAGTTGCAGTACCTGGCAGCACAGAACAAGGGACTC...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGCACTCAGCCTCTGCCTaGTTGCGGCGGCTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWHSASA*LRRLSL
Trigger: CAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTG...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCCTTGCGCTGCCTCATCTCTaGCACTGCAGCCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: EEASCLLTSPGASPLSALALPHL*HCSHAV
Trigger: GACAGCATGGCTGCAGTGGCAGAGATGAGGCAGCGC...AAGGGCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp TTGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTAGCTCCCGGATGTACTaGGATGAATCCGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLLQEFPCHGLPLLAQVPSSRMY*DESEWF
Trigger: GAACCACTCGGATTCATCGCAGTACATCCGGGAGCT...AGGAACCTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR GCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCTGTGCCCGTGTCACCTaGCCCTTCTCTAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGCARVT*PFSRVS
Trigger: TGAGACCCTAGAGAAGGGGCAGGTGACACGGGCACA...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTGGTACCTGCTGTTCTTaGAACTGCCGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFGTCCS*NCRMVL
Trigger: GAGTACCATTCGGCAGTTGCAAGAACAGCAGGTACC...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CCA 90 bp CGCAAACGCACAGTCATGAGCTCGTCCTGTAACTCGCCCAGGACCAACTTCCGCTCCGGGAGCCATTCATaGAGCGCATGGACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RKRTVMSSSCNSPRTNFRSGSHS*SAWTWS
Trigger: ACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGA...GCGGAAGTTGGTCCTGGGCGAGTTACAGGACGAGCTCATGACTGTGCGTTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CCA 90 bp CGCAAACGCACAGTCATGAGCTCGTCCTGTAACTCGCCCAGGACCAACTTCCGCACTCCTCCCACTCGTTaGCAATTCGGCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RKRTVMSSSCNSPRTNFRTPPTR*QFGPRE
Trigger: TTCTCTGGGGCCGAATTGCCAACGAGTGGGAGGAGT...GCGGAAGTTGGTCCTGGGCGAGTTACAGGACGAGCTCATGACTGTGCGTTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CCA 90 bp GGAAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACAGGAGCTCAGAGTACTaGTTTTTGACGGGCATATCT +
Preference number: 4 (lower is better)
Translates to: GNGAGGPTQEAPRECCGHRSSEY*FLTGIS
Trigger: AGATATGCCCGTCAAAAACCAGTACTCTGAGCTCCT...GTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGAGATGAGTTTCTCACATaGGGAGGACATCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRDEFLT*GGHLEE
Trigger: CTCCTCAAGATGTCCTCCCCATGTGAGAAACTCATC...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTGATGAGTTTCTCACATaGGGAGGACATCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGDEFLT*GGHLEE
Trigger: CTCCTCAAGATGTCCTCCCCATGTGAGAAACTCATC...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCTTGAAGAGGACTTCCTaGCCCAGGCTGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGLKRTS*PRLSWP
Trigger: AGGCCAGGACAGCCTGGGCCAGGAAGTCCTCTTCAA...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGACINSV*FTCSRA
Trigger: TGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCA...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGAGGACCAGCTTGTCTaGGCAGCTGTCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYEDQLV*AAVKLV
Trigger: CACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTC...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCAGTTCTGTCTCCAGGTaGGCCACAAAGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPSSVSR*ATKSSV
Trigger: CACAGAGGACTTTGTGGCCCACCTGGAGACAGAACT...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGAGAGAGAGGGTAGAGTaGGTCCTGCAGGGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGRERVE*VLQGCA
Trigger: GGCGCAGCCCTGCAGGACCCACTCTACCCTCTCTCT...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCTACCTTCGCTGTCCTTaGCTGGCCGATCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGYLRCP*LADPGF
Trigger: GAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTA...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
3UTR CAA 72 bp AATGTCGGTGGGCCTTTCAGCAACCGCACCTCAGTCTaGAGCTCCTCGATCTGGTCCTTCAGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: NVGGPFSNRTSV*SSSIWSFSSRM
Trigger: CATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTTGCTGAAAGGCCCACCGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR TCA 90 bp TGGCTAGTTCATCTGCATCGCTGTCTGAGCTACCTTCGCTGTCCTTGGCTGGCCCTAGCTCATCTGGGCTaGGATTCTCGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: WLVHLHRCLSYLRCPWLALAHLG*DSRSQR
Trigger: CCTCTGACTCCGAGAATCTCAGCCCAGATGAGCTAG...GGCCAGCCAAGGACAGCGAAGGTAGCTCAGACAGCGATGCAGATGAACTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR TCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGGGAGCTGGATACCAGTaGGGAGCCACTGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWGAGYQ*GATVPP
Trigger: CGGAGGAACAGTGGCTCCTCACTGGTATCCAGCTCC...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGGCTGTCCTGGCCTTTaGAGAATTCATGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYGCPGL*RIHALG
Trigger: ACCCAGAGCATGAATTCTTCAAAGGCCAGGACAGCC...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCGGCTGTCCTGGCCTTTaGAGAATTCATGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSGCPGL*RIHALG
Trigger: ACCCAGAGCATGAATTCTTCAAAGGCCAGGACAGCC...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCGGCCATGCTGGGCTTaGAGAGCTCCCGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCRPCWA*RAPVAG
Trigger: ACCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGAGTTCTCATCTGGCAGTaGGCTGTTTCTCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRVLIWQ*AVSLFH
Trigger: ATGGAAAAGAGAAACAGCTCACTGCCAGATGAGAAC...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGGTGCCGCGTTAGGCTaGGCCCATCGAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSEGAALG*AHRKPA
Trigger: CGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACC...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GAACAGGCAGTGTGCAAAATGGTGGTGGGCAGTGTGGAGGGGCACATGAGGAGCATCTGCATCGCTGTCTaGGCTACCTTCGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: EQAVCKMVVGSVEGHMRSICIAV*ATFAVL
Trigger: AAGGACAGCGAAGGTAGCTCAGACAGCGATGCAGAT...GCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCACACTGCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTAAGGAACCAGGACGATaGATACATGGACGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGAKEPGR*IHGRVE
Trigger: TTCCACACGTCCATGTATGCATCGTCCTGGTTCCTT...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCCCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPPSMSS*INSVWF
Trigger: GAACCAGACAGAGTTGATGCAACTGGACATGGAGGG...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGGAAGTACTGGGACATaGCCTCCATGTCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYGSTGT*PPCPVA
Trigger: TGCAACTGGACATGGAGGGCATGTCCCAGTACTTCC...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCGTGTCTGAGAGCTCCTaGAGCTGCAGCTTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGVSESS*SCSFSS
Trigger: GGAGCTAAAGCTGCAGCTGCAGGAGCTCTCAGACAC...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGATCCCTTGTTCTGTGCTaGCAGGTACTGCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRSLVLC*QVLQLL
Trigger: GAGAAGTTGCAGTACCTGGCAGCACAGAACAAGGGA...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCATCAGCTGGCCCTGGATaGGGCCCTCCTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPSAGPG*GPPPSG
Trigger: TCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGA...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTGGAGCGCATGGACTTaGAGTCGGCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGWSAWT*SRLPGA
Trigger: GGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CCACGCCCAGCAGCTCCTCATCAGAAGATGGTAGCGAATCCTCATCCAGGTGCCCATTCATGGAGCGCATaGACTTGGAGTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PRPAAPHQKMVANPHPGAHSWSA*TWSRLP
Trigger: TGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATG...GGCACCTGGATGAGGATTCGCTACCATCTTCTGATGAGGAGCTGCTGGGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CCA 90 bp TTGGCAACTTCTGGCTGTGATTCCCCAGCCCTTTGGCTCTCTATTCGGCATCCCAGGAGGCTGAGGAGCTaGATACCAGTGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LATSGCDSPALWLSIRHPRRLRS*IPVRSH
Trigger: GTGGCTCCTCACTGGTATCCAGCTCCTCAGCCTCCT...GGGATGCCGAATAGAGAGCCAAAGGGCTGGGGAATCACAGCCAGAAGTTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
CDS-3UTR CCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCCAGCTGTCAAACTGGTaGGGGATGACTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSQLSNW*GMTLWK
Trigger: CTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTG...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGGGTGAAGGGTAAAGGAGCCTGGGGAGCATTGATGGACTTTGGCACCATTCTCGGGCAGCTGTCAAACTaGTGGGGGATGACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GVKGKGAWGALMDFGTILGQLSN*WGMTLW
Trigger: CCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCC...GAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCATCCGAGTGGTTCAGCTaGCCCTGGATGCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPSEWFS*PWMRPS
Trigger: GGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGA...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGGCTGGGGGCTTTGGTTTCTGCTGCAGGGGCCATGATGCCTGCACCAGGCAGACTTGCAACTGCCGAATaGTACTCTGTGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLGALVSAAGAMMPAPGRLATAE*YSVLSE
Trigger: TTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAG...TCTGCCTGGTGCAGGCATCATGGCCCCTGCAGCAGAAACCAAAGCCCCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTGGCCCAGGTTCCTCTGATGGCCTGTGCACCATCTACGAATCTGAAGGACCAGTTAGCGATGCTGAATTaGGCCGCTGGGCCGAATTGC +
Preference number: 4 (lower is better)
Translates to: LAQVPLMACAPSTNLKDQLAMLN*AAGPNC
Trigger: GCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAA...CTGGTCCTTCAGATTCGTAGATGGTGCACAGGCCATCAGAGGAACCTGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGCTGACAGGGCCTCTTaGGATGAGGAGTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCADRAS*DEESGL
Trigger: GAGCCCGGACTCCTCATCTCAAGAGGCCCTGTCAGC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GAACAGGCAGTGTGCAAAATGGTGGTGGGCAGTGTGGAGGGGCACATGAGGAGCTCCGGATCAGCTCCTTaGGTAGTTTTTCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EQAVCKMVVGSVEGHMRSSGSAP*VVFPSC
Trigger: GCAGGAAGGAAAAACTACTCAAGGAGCTGATCCGGA...GCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCACACTGCCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATTCCGGATCAGCTCCTTaGGTAGTTTTTCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYSGSAP*VVFPSC
Trigger: GCAGGAAGGAAAAACTACTCAAGGAGCTGATCCGGA...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATCAGAGTACTGGTTTTTaGCGGGCATATCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYQSTGF*RAYLWH
Trigger: GTGCCACAGATATGCCCGTCAAAAACCAGTACTCTG...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCGGCCATGCTGGGCTTaGAGAGCTCCCGTAGCCGGT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFRPCWA*RAPVAG
Trigger: ACCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp CCACGCCCAGCAGCTCCTCATCAGAAGATGGTAGCGAATCCTCATCCAGGTGCCCTGTTCGAAGCCTTTTaGTCTCGATCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRPAAPHQKMVANPHPGALFEAF*SRSAPP
Trigger: TGGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAG...GGCACCTGGATGAGGATTCGCTACCATCTTCTGATGAGGAGCTGCTGGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR TCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGCGGCTTTCGCTGAGCTaGGTCTGGAGTCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWRLSLS*VWSPLF
Trigger: GAACAAGGGACTCCAGACTCAGCTCAGCGAAAGCCG...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GCAGGAGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGACCGCACCTCAGTCTTaGGCTCCTCGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGVTEAQNSLVLWSSKLATAPQS*APRSGP
Trigger: AGGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGT...CGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACTCCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCGTAGCCGGTACTCCTaGATCAGTCGCACGAATACA +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGRSRYS*ISRTNT
Trigger: TGTATTCGTGCGACTGATGCAGGAGTACCGGCTACG...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTCTTTTGATCTCGATCTaGTCCTCCATCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGLLISI*SSISLL
Trigger: GAGTAAAGAGATGGAGGAGCAGATCGAGATCAAAAG...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCACACTCAGCCTCTGCCTaGTTGCGGCGGCTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPHSASA*LRRLSL
Trigger: CAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTG...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGCTTGCACTCAGCCTCTaGCTGCTTGCGGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLLALSL*LLAAAF
Trigger: GAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTGCAAG...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCTTCCTCCTTACTCTTaGACTCAGCCTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGLPPYS*TQPLPA
Trigger: AGCAGGCAGAGGCTGAGTGCAAGAGTAAGGAGGAAG...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTGCAGCCATGCTGTCTaGCTCCCGAAGTCGAACAGC +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGCSHAV*LPKSNS
Trigger: GCTGTTCGACTTCGGGAGGCAGACAGCATGGCTGCA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGGCGCTGCCTCATCTCTaGCACTGCAGCCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLALPHL*HCSHAV
Trigger: GACAGCATGGCTGCAGTGGCAGAGATGAGGCAGCGC...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GCAGGAGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGCTGGATCTCCAGCTCTaGGATGCGCTGCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: AGVTEAQNSLVLWSSKLALDLQL*DALPHL
Trigger: GAGATGAGGCAGCGCATCGCAGAGCTGGAGATCCAG...CGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACTCCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGGAATAAATGGACCGAGGCTGAGAACTCCCAAGTAGCGGGGTTCTCTCTTTTATCAGCTGGCCCTGGATaGGGCCCTCCTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RNKWTEAENSQVAGFSLLSAGPG*GPPPSG
Trigger: TCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGA...TAAAAGAGAGAACCCCGCTACTTGGGAGTTCTCAGCCTCGGTCCATTTATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTGTGCCCGTGTCACCTaGCCCTTCTCTAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGCARVT*PFSRVS
Trigger: TGAGACCCTAGAGAAGGGGCAGGTGACACGGGCACA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGACGATGGCCCGAAAGTaGTGTGGGATGCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLTMARK*CGMPFR
Trigger: CCGGAAGGGCATCCCACACCACTTTCGGGCCATCGT...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCGAAGAATTCATGCTCTaGGTAGGTGCGGGCAATATC +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPEEFML*VGAGNI
Trigger: GATATTGCCCGCACCTACCCAGAGCATGAATTCTTC...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCGCATACATGGACGTGTaGAAGCTCTGTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGAYMDV*KLCERK
Trigger: CTTCCGCTCACAGAGCTTCCACACGTCCATGTATGC...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSCINSV*FTCSRA
Trigger: TGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCA...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCGTTCCTCCTGCAGCCTaGCTACATTGTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSVPPAA*LHCSHL
Trigger: CAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAAC...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTTGGTTCAGCTGGCCCTaGATGCGGCCCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGWFSWP*MRPSSL
Trigger: GAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCA...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTACCTTCGCTGTCCTTaGCTGGCCGATCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGYLRCP*LADPGF
Trigger: GAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTCTTGCAACTGCCGAATaGTACTCTGTGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFLATAE*YSVLSE
Trigger: TTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAG...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCAGTCCGGGCTCAGAGTaGGGCTTGCCATGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCSPGSE*GLPWWA
Trigger: TGCCCACCATGGCAAGCCCCACTCTGAGCCCGGACT...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177053.8
CDS-3UTR TCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGCAGGGCCTCTTGAGATaGGGAGTCCGGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSEQGLLR*GVRAQS
Trigger: ACTCTGAGCCCGGACTCCTCATCTCAAGAGGCCCTG...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTGCTGACAGGGCCTCTTaGGATGAGGAGTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGADRAS*DEESGL
Trigger: GAGCCCGGACTCCTCATCTCAAGAGGCCCTGTCAGC...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGCTGACAGGGCCTCTTaGGATGAGGAGTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFADRAS*DEESGL
Trigger: GAGCCCGGACTCCTCATCTCAAGAGGCCCTGTCAGC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGCTAGCTCATCTGGGCTaGGATTCTCGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGLAHLG*DSRSQR
Trigger: CCTCTGACTCCGAGAATCTCAGCCCAGATGAGCTAG...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCAGGAGCTGGATACCAGTaGGGAGCCACTGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPGAGYQ*GATVPP
Trigger: CGGAGGAACAGTGGCTCCTCACTGGTATCCAGCTCC...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGGAGCTGGATACCAGTaGGGAGCCACTGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCGAGYQ*GATVPP
Trigger: CGGAGGAACAGTGGCTCCTCACTGGTATCCAGCTCC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GGGGTGAAGGGTAAAGGAGCCTGGGGAGCATTGATGGACTTTGGCACCATTCTCATGGGGAGGACATCTTaGGGAGCTCAGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: GVKGKGAWGALMDFGTILMGRTS*GAQSTG
Trigger: ACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCAT...GAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTCCAGGAGCCGGTTCTaGTCCTCGAGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCSRSRF*SSSLAS
Trigger: ACTGGCCAAGCTCGAGGAGCAGAACCGGCTCCTGGA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCAGCACTGCACAGGAGCTaGCAGACGATGGCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPALHRS*QTMARK
Trigger: CTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGC...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GCAGGAGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGCATATCTGTGGCACTaGACAGGAGCTGCCAGACGA +
Preference number: 4 (lower is better)
Translates to: AGVTEAQNSLVLWSSKLAAYLWH*TGAARR
Trigger: TCGTCTGGCAGCTCCTGTGCAGTGCCACAGATATGC...CGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACTCCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGGAATAAATGGACCGAGGCTGAGAACTCCCAAGTAGCGGGGTTCTCTCTTTTAATCGGCCAGGGCCTGTaGCTCGCGCAAACGCACAGT +
Preference number: 4 (lower is better)
Translates to: RNKWTEAENSQVAGFSLLIGQGL*LAQTHS
Trigger: ACTGTGCGTTTGCGCGAGGCACAGGCCCTGGCCGAT...TAAAAGAGAGAACCCCGCTACTTGGGAGTTCTCAGCCTCGGTCCATTTATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCTCCCTTGTTCTGTGCTaGCAGGTACTGCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGSLVLC*QVLQLL
Trigger: GAGAAGTTGCAGTACCTGGCAGCACAGAACAAGGGA...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGCTTGCACTCAGCCTCTaGCTGCTTGCGGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSELALSL*LLAAAF
Trigger: GAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTGCAAG...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTCTCCTCAGCCTCCTGTaGCCGTGTCACCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGLLSLL*PCHLPL
Trigger: AAGGGGCAGGTGACACGGGCACAGGAGGCTGAGGAG...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGATTTTCCTGCTGTTCTTaGAACTGCCGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: GLSWFPLTAHTPGGMSCRFSCCS*NCRMVL
Trigger: GAGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAA...TCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGGGTGAAGGGTAAAGGAGCCTGGGGAGCATTGATGGACTTTGGCACCATTCTCAGGCGAGGGTTTTCCTaGTGTTCTTGCAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: GVKGKGAWGALMDFGTILRRGFS*CSCNCR
Trigger: TCGGCAGTTGCAAGAACAGCAGGAAAACCCTCGCCT...GAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGCTCAGAGTGGGGCTTaGCATGGTGGGCAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCAQSGA*HGGQAH
Trigger: ATGAGCCTGCCCACCATGGCAAGCCCCACTCTGAGC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177053.8
CDS-3UTR CCA 90 bp GAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCCTTCATTCATGGAGCGCATaGACTTGGAGTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: EEASCLLTSPGASPLSALHSWSA*TWSRLP
Trigger: TGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATG...AAGGGCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTGCGATGAATCCGAGTaGTTCAGCTGGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGCDESE*FSWPWM
Trigger: CATCCAGGGCCAGCTGAACCACTCGGATTCATCGCA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GCAGGAGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGTTGAGCTCCTCGATCTaGTCCTTCAGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: AGVTEAQNSLVLWSSKLALSSSI*SFSSRM
Trigger: CATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAA...CGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCAGGGCCTCTTGAGATaGGGAGTCCGGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFQGLLR*GVRAQS
Trigger: ACTCTGAGCCCGGACTCCTCATCTCAAGAGGCCCTG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGGAGCTGGATACCAGTaGGGAGCCACTGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFGAGYQ*GATVPP
Trigger: CGGAGGAACAGTGGCTCCTCACTGGTATCCAGCTCC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GCAGGAGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGATGGGGAGGACATCTTaGGGAGCTCAGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: AGVTEAQNSLVLWSSKLAMGRTS*GAQSTG
Trigger: ACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCAT...CGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGGAGTAAGCCCACAATaGAGGCACTGCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCGVSPQ*RHCPGS
Trigger: ACTGCCAGGGCAGTGCCTTCATTGTGGGCTTACTCC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGCACTGCACAGGAGCTaGCAGACGATGGCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFALHRS*QTMARK
Trigger: CTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATTTTACTCTTCATAGCTaGGTACTCCTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYFTLHS*VLLLQP
Trigger: AGGCTGGAGAAGGAGTACGCAGCTATGAAGAGTAAA...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCCTTTTGATCTCGATCTaGTCCTCCATCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: LTRINTAMQGRPASRPCPLLISI*SSISLL
Trigger: GAGTAAAGAGATGGAGGAGCAGATCGAGATCAAAAG...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGGCCTTGAGTTCCTCCTaGAGCCTGGCTACATTGTTC +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGALSSS*SLATLF
Trigger: GAACAATGTAGCCAGGCTGCAGGAGGAACTCAAGGC...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTCTTGCACTCAGCCTCTaGCTGCTTGCGGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGLALSL*LLAAAF
Trigger: GAAAGCCGCCGCAAGCAGGCAGAGGCTGAGTGCAAG...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGCTTCCTCCTTACTCTTaGACTCAGCCTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWLPPYS*TQPLPA
Trigger: AGCAGGCAGAGGCTGAGTGCAAGAGTAAGGAGGAAG...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCATGCAGCCATGCTGTCTaGCTCCCGAAGTCGAACAGC +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPCSHAV*LPKSNS
Trigger: GCTGTTCGACTTCGGGAGGCAGACAGCATGGCTGCA...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGTCTCCAGCTCTGCGATaGGCTGCCTCATCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSESPALR*AASSLP
Trigger: TGGCAGAGATGAGGCAGCGCATCGCAGAGCTGGAGA...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATTTTTCCTGCTGTTCTTaGAACTGCCGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYFSCCS*NCRMVL
Trigger: GAGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAA...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTGGAGCGCATGGACTTaGAGTCGGCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFWSAWT*SRLPGA
Trigger: GGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCAGGAGGCTGAGGAGCTaGATACCAGTGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCRRLRS*IPVRSH
Trigger: GTGGCTCCTCACTGGTATCCAGCTCCTCAGCCTCCT...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCACGATGGCCCGAAAGTaGTGTGGGATGCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFTMARK*CGMPFR
Trigger: CCGGAAGGGCATCCCACACCACTTTCGGGCCATCGT...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTGAAGAGGACTTCCTaGCCCAGGCTGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCLKRTS*PRLSWP
Trigger: AGGCCAGGACAGCCTGGGCCAGGAAGTCCTCTTCAA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTATCAAAGACCCGGGTaGCAACAGGCAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCYQRPG*QQAGGR
Trigger: CCTTCCCCCTGCCTGTTGCCACCCGGGTCTTTGATA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGGGCAGCTGTCAAACTaGTGGGGGATGACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCGQLSN*WGMTLW
Trigger: CCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGGAGGACCAGCTTGTCTaGGCAGCTGTCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLEDQLV*AAVKLV
Trigger: CACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTC...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GCAATCTTTCTAGTCCCCACATTTGCTCTTACAGGAGTTCCCCTGCCATGGCCTTTGAGCTCCTCGATCTaGTCCTTCAGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: AIFLVPTFALTGVPLPWPLSSSI*SFSSRM
Trigger: CATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAA...AGGCCATGGCAGGGGAACTCCTGTAAGAGCAAATGTGGGGACTAGAAAGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
3UTR CAA 72 bp TGGATTAGGCCAGGCTCAAGCCCTCTCTTCATCCCTTaGGCATTTCTCACACCACCTAGCCACTGGATCCAT +
Preference number: 4 (lower is better)
Translates to: WIRPGSSPLFIP*AFLTPPSHWIH
Trigger: ATGGATCCAGTGGCTAGGTGGTGTGAGAAATGCCAAAGGGATGAAGAGAGGGCTTGAGCCTGGCCTAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCTAGCTCATCTGGGCTaGGATTCTCGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCLAHLG*DSRSQR
Trigger: CCTCTGACTCCGAGAATCTCAGCCCAGATGAGCTAG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGCAGAGTACTGGTTTTTaGCGGGCATATCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWQSTGF*RAYLWH
Trigger: GTGCCACAGATATGCCCGTCAAAAACCAGTACTCTG...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGGAGTAAGCCCACAATaGAGGCACTGCCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFGVSPQ*RHCPGS
Trigger: ACTGCCAGGGCAGTGCCTTCATTGTGGGCTTACTCC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCGTGTGGAAGCTCTGTaGGCGGAAGTGGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCRVEAL*AEVGIQ
Trigger: CTGAATACCCACTTCCGCTCACAGAGCTTCCACACG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCAAACTGGTGGGGGATaGCTCTCTGGAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCQTGGG*LSGSTG
Trigger: CCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGCTGTTCGAAGCCTTTTaGTCTCGATCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGLFEAF*SRSAPP
Trigger: TGGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAG...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGTAGTTTTTCCTTCCTaGGCCGCCACTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCVVFPS*AATPPT
Trigger: AGTGGGAGGAGTGGCGGCGCAGGAAGGAAAAACTAC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp CTGCCTCCTCCACCTGGCCCTCAGTTGGCAGGAGTTACAGAGGCACAGAATTCCCTTTTGATCTCGATCTaGTCCTCCATCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: LPPPPGPQLAGVTEAQNSLLISI*SSISLL
Trigger: GAGTAAAGAGATGGAGGAGCAGATCGAGATCAAAAG...GGAATTCTGTGCCTCTGTAACTCCTGCCAACTGAGGGCCAGGTGGAGGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGTCTCGTAACCGTGACTaGTCCAGTTCTGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLSRNRD*SSSVSR
Trigger: CCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGA...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTCTCCCGCACCTTGAGTaGCTTGAGTTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGLPHLE*LEFLLQ
Trigger: CTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAG...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGTGTCTGAGAGCTCCTaGAGCTGCAGCTTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSEVSESS*SCSFSS
Trigger: GGAGCTAAAGCTGCAGCTGCAGGAGCTCTCAGACAC...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTGTCCAGGCCCTGGTTaGTATAAGGAGTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGCPGPG*YKEWLV
Trigger: AACTAGCCACTCCTTATAGCAACCAGGGCCTGGACA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GCAGGAGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGTGTCCAGGCCCTGGTTaGTATAAGGAGTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: AGVTEAQNSLVLWSSKLACPGPG*YKEWLV
Trigger: AACTAGCCACTCCTTATAGCAACCAGGGCCTGGACA...CGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TCTCTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGTGGAGCGCATGGACTTaGAGTCGGCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLLQPANTCDISTPQRKMWSAWT*SRLPGA
Trigger: GGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCA...CATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTCCGGGAGCCATTCATaGAGCGCATGGACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCSGSHS*SAWTWS
Trigger: ACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCAGGAGGCTGAGGAGCTaGATACCAGTGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFRRLRS*IPVRSH
Trigger: GTGGCTCCTCACTGGTATCCAGCTCCTCAGCCTCCT...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCCTTGAAGAATTCATGCTCTaGGTAGGTGCGGGCAATATC +
Preference number: 4 (lower is better)
Translates to: EEASCLLTSPGASPLSALEEFML*VGAGNI
Trigger: GATATTGCCCGCACCTACCCAGAGCATGAATTCTTC...AAGGGCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTTGAAGAGGACTTCCTaGCCCAGGCTGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFLKRTS*PRLSWP
Trigger: AGGCCAGGACAGCCTGGGCCAGGAAGTCCTCTTCAA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTATCAAAGACCCGGGTaGCAACAGGCAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFYQRPG*QQAGGR
Trigger: CCTTCCCCCTGCCTGTTGCCACCCGGGTCTTTGATA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGGGCAGCTGTCAAACTaGTGGGGGATGACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFGQLSN*WGMTLW
Trigger: CCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCAGAGGACCAGCTTGTCTaGGCAGCTGTCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPEDQLV*AAVKLV
Trigger: CACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTC...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGAGTTCTGTCTCCAGGTaGGCCACAAAGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLSSVSR*ATKSSV
Trigger: CACAGAGGACTTTGTGGCCCACCTGGAGACAGAACT...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGGTTCCTCCTGCAGCCTaGCTACATTGTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWVPPAA*LHCSHL
Trigger: CAGATGAGAACAATGTAGCCAGGCTGCAGGAGGAAC...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCTAGCTCATCTGGGCTaGGATTCTCGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFLAHLG*DSRSQR
Trigger: CCTCTGACTCCGAGAATCTCAGCCCAGATGAGCTAG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCATGGGGAGGACATCTTaGGGAGCTCAGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCMGRTS*GAQSTG
Trigger: ACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCAT...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGGCTGTCCTGGCCTTTaGAGAATTCATGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSEGCPGL*RIHALG
Trigger: ACCCAGAGCATGAATTCTTCAAAGGCCAGGACAGCC...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGGCTGTCCTGGCCTTTaGAGAATTCATGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCGCPGL*RIHALG
Trigger: ACCCAGAGCATGAATTCTTCAAAGGCCAGGACAGCC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCGTGTGGAAGCTCTGTaGGCGGAAGTGGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFRVEAL*AEVGIQ
Trigger: CTGAATACCCACTTCCGCTCACAGAGCTTCCACACG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCAAACTGGTGGGGGATaGCTCTCTGGAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFQTGGG*LSGSTG
Trigger: CCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCAGTACTCTGTGCTTTCTaGAGGTCCTCTGCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPVLCAF*RSSAVE
Trigger: CTCGACTGCAGAGGACCTTCAGAAAGCACAGAGTAC...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTTGTGTGGCCAGCTTTaGGGACATGCCAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFLCGQL*GHANWG
Trigger: TCCCCAGTTGGCATGTCCTCAAAGCTGGCCACACAA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGTAGTTTTTCCTTCCTaGGCCGCCACTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFVVFPS*AATPPT
Trigger: AGTGGGAGGAGTGGCGGCGCAGGAAGGAAAAACTAC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGCATATCTGTGGCACTaGACAGGAGCTGCCAGACGA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFAYLWH*TGAARR
Trigger: TCGTCTGGCAGCTCCTGTGCAGTGCCACAGATATGC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCACGTAGCCGGTACTCCTaGATCAGTCGCACGAATACA +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPRSRYS*ISRTNT
Trigger: TGTATTCGTGCGACTGATGCAGGAGTACCGGCTACG...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGTCTGTCTGGTTCACTTaGAGCAGGGCAAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSESVWFT*SRARPT
Trigger: AGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGA...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTCTGTCTGGTTCACTTaGAGCAGGGCAAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCSVWFT*SRARPT
Trigger: AGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGGAAGTACTGGGACATaGCCTCCATGTCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCGSTGT*PPCPVA
Trigger: TGCAACTGGACATGGAGGGCATGTCCCAGTACTTCC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp CCTCGATCTGGTCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTGGTTCATTTACTCTTCATAGCTaGGTACTCCTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PRSGPSAPGCTAMNPSGSFTLHS*VLLLQP
Trigger: AGGCTGGAGAAGGAGTACGCAGCTATGAAGAGTAAA...TGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCTTTTGATCTCGATCTaGTCCTCCATCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: GGGSFLLINKSWGLPTFGLLISI*SSISLL
Trigger: GAGTAAAGAGATGGAGGAGCAGATCGAGATCAAAAG...GCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp TCTCTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGCTCCCGCACCTTGAGTaGCTTGAGTTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLLQPANTCDISTPQRKMLPHLE*LEFLLQ
Trigger: CTGCAGGAGGAACTCAAGGCACTCAAGGTGCGGGAG...CATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GCTCAATATCACTGTGTCCAGAGAACCTGTCCTGGGGTGCTAATATCCAGTCCAAGCTCCCGGATGTACTaGGATGAATCCGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AQYHCVQRTCPGVLISSPSSRMY*DESEWF
Trigger: GAACCACTCGGATTCATCGCAGTACATCCGGGAGCT...TGGACTGGATATTAGCACCCCAGGACAGGTTCTCTGGACACAGTGATATTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCCAGCTTTGAGGACATaGCAACTGGGGAATGCGCTC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFPALRT*QLGNAL
Trigger: GAGCGCATTCCCCAGTTGGCATGTCCTCAAAGCTGG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCATTCATGGAGCGCATaGACTTGGAGTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCHSWSA*TWSRLP
Trigger: TGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTACTCCTCCCACTCGTTaGCAATTCGGCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGTPPTR*QFGPRE
Trigger: TTCTCTGGGGCCGAATTGCCAACGAGTGGGAGGAGT...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCACTCCTCCCACTCGTTaGCAATTCGGCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFTPPTR*QFGPRE
Trigger: TTCTCTGGGGCCGAATTGCCAACGAGTGGGAGGAGT...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGGATGAGTTTCTCACATaGGGAGGACATCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWDEFLT*GGHLEE
Trigger: CTCCTCAAGATGTCCTCCCCATGTGAGAAACTCATC...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGGAAGAATTCATGCTCTaGGTAGGTGCGGGCAATATC +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGEEFML*VGAGNI
Trigger: GATATTGCCCGCACCTACCCAGAGCATGAATTCTTC...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp TCTCTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGTTGAAGAGGACTTCCTaGCCCAGGCTGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLQPANTCDISTPQRKMLKRTS*PRLSWP
Trigger: AGGCCAGGACAGCCTGGGCCAGGAAGTCCTCTTCAA...CATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGCATACATGGACGTGTaGAAGCTCTGTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCAYMDV*KLCERK
Trigger: CTTCCGCTCACAGAGCTTCCACACGTCCATGTATGC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCAGCTGTCAAACTGGTaGGGGATGACTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCQLSNW*GMTLWK
Trigger: CTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGAGGACCAGCTTGTCTaGGCAGCTGTCAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFEDQLV*AAVKLV
Trigger: CACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp TCAAGAGATCAAACAGTGGTGGTGAGGTTCAGGTCTGGTGACAAGTGCTCCTCTAATTGCTGTCTCCCTTaGACGAGTCTCGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRDQTVVVRFRSGDKCSSNCCLP*TSLVPA
Trigger: TGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATT...AGAGGAGCACTTGTCACCAGACCTGAACCTCACCACCACTGTTTGATCTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR TCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCAGAGTACTGGTTTTTaGCGGGCATATCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCQSTGF*RAYLWH
Trigger: GTGCCACAGATATGCCCGTCAAAAACCAGTACTCTG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp AGGAATAAATGGACCGAGGCTGAGAACTCCCAAGTAGCGGGGTTCTCTCTTTTAATGGGGAGGACATCTTaGGGAGCTCAGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: RNKWTEAENSQVAGFSLLMGRTS*GAQSTG
Trigger: ACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCAT...TAAAAGAGAGAACCCCGCTACTTGGGAGTTCTCAGCCTCGGTCCATTTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGGCTGTCCTGGCCTTTaGAGAATTCATGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFGCPGL*RIHALG
Trigger: ACCCAGAGCATGAATTCTTCAAAGGCCAGGACAGCC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGGTTCTCATCTGGCAGTaGGCTGTTTCTCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGVLIWQ*AVSLFH
Trigger: ATGGAAAAGAGAAACAGCTCACTGCCAGATGAGAAC...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTATCTGCATCGCTGTCTaGGCTACCTTCGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGICIAV*ATFAVL
Trigger: AAGGACAGCGAAGGTAGCTCAGACAGCGATGCAGAT...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCGTAGCCGGTACTCCTaGATCAGTCGCACGAATACA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFRSRYS*ISRTNT
Trigger: TGTATTCGTGCGACTGATGCAGGAGTACCGGCTACG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTCTGTCTGGTTCACTTaGAGCAGGGCAAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFSVWFT*SRARPT
Trigger: AGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGCCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSEPSMSS*INSVWF
Trigger: GAACCAGACAGAGTTGATGCAACTGGACATGGAGGG...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCCCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCPSMSS*INSVWF
Trigger: GAACCAGACAGAGTTGATGCAACTGGACATGGAGGG...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGGAAGTACTGGGACATaGCCTCCATGTCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFGSTGT*PPCPVA
Trigger: TGCAACTGGACATGGAGGGCATGTCCCAGTACTTCC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCATTCATGGAGCGCATaGACTTGGAGTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFHSWSA*TWSRLP
Trigger: TGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATTTCTCGAAGGGCCCCCAGAGTCTCTGTTTCTCGTAACCGTGACTGCTCCAGTAGGAGCTCAGAGTACTaGTTTTTGACGGGCATATCT +
Preference number: 4 (lower is better)
Translates to: ISRRAPRVSVSRNRDCSSRSSEY*FLTGIS
Trigger: AGATATGCCCGTCAAAAACCAGTACTCTGAGCTCCT...ACTGGAGCAGTCACGGTTACGAGAAACAGAGACTCTGGGGGCCCTTCGAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGCATACATGGACGTGTaGAAGCTCTGTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFAYMDV*KLCERK
Trigger: CTTCCGCTCACAGAGCTTCCACACGTCCATGTATGC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCCINSV*FTCSRA
Trigger: TGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCAGCTGTCAAACTGGTaGGGGATGACTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFQLSNW*GMTLWK
Trigger: CTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTCCGGATCAGCTCCTTaGGTAGTTTTTCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFSGSAP*VVFPSC
Trigger: GCAGGAAGGAAAAACTACTCAAGGAGCTGATCCGGA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTCAGAGTACTGGTTTTTaGCGGGCATATCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGQSTGF*RAYLWH
Trigger: GTGCCACAGATATGCCCGTCAAAAACCAGTACTCTG...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR TCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCAGAGTACTGGTTTTTaGCGGGCATATCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFQSTGF*RAYLWH
Trigger: GTGCCACAGATATGCCCGTCAAAAACCAGTACTCTG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp TCTCTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGTCTGTCTGGTTCACTTaGAGCAGGGCAAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: SLLQPANTCDISTPQRKMSVWFT*SRARPT
Trigger: AGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGA...CATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGGAATAAATGGACCGAGGCTGAGAACTCCCAAGTAGCGGGGTTCTCTCTTTTACCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RNKWTEAENSQVAGFSLLPSMSS*INSVWF
Trigger: GAACCAGACAGAGTTGATGCAACTGGACATGGAGGG...TAAAAGAGAGAACCCCGCTACTTGGGAGTTCTCAGCCTCGGTCCATTTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCCCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFPSMSS*INSVWF
Trigger: GAACCAGACAGAGTTGATGCAACTGGACATGGAGGG...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp TCTCTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGTCTCGTAACCGTGACTaGTCCAGTTCTGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLQPANTCDISTPQRKMSRNRD*SSSVSR
Trigger: CCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGA...CATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp AGGAATAAATGGACCGAGGCTGAGAACTCCCAAGTAGCGGGGTTCTCTCTTTTAGAGTCCCTTGTTCTGTaGTGCCAGGTACTGCAACTT +
Preference number: 4 (lower is better)
Translates to: RNKWTEAENSQVAGFSLLESLVL*CQVLQL
Trigger: AAGTTGCAGTACCTGGCAGCACAGAACAAGGGACTC...TAAAAGAGAGAACCCCGCTACTTGGGAGTTCTCAGCCTCGGTCCATTTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTGAGTCCCTTGTTCTGTaGTGCCAGGTACTGCAACTT +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGESLVL*CQVLQL
Trigger: AAGTTGCAGTACCTGGCAGCACAGAACAAGGGACTC...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGATGAGTTTCTCACATaGGGAGGACATCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCDEFLT*GGHLEE
Trigger: CTCCTCAAGATGTCCTCCCCATGTGAGAAACTCATC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGAAGAATTCATGCTCTaGGTAGGTGCGGGCAATATC +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCEEFML*VGAGNI
Trigger: GATATTGCCCGCACCTACCCAGAGCATGAATTCTTC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFCINSV*FTCSRA
Trigger: TGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGCTTGCAACTGCCGAATaGTACTCTGTGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLLATAE*YSVLSE
Trigger: TTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAG...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCAAGGAACCAGGACGATaGATACATGGACGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFKEPGR*IHGRVE
Trigger: TTCCACACGTCCATGTATGCATCGTCCTGGTTCCTT...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTTACTCTTCATAGCTaGGTACTCCTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCFTLHS*VLLLQP
Trigger: AGGCTGGAGAAGGAGTACGCAGCTATGAAGAGTAAA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCAGGAGCTCAGAGTACTaGTTTTTGACGGGCATATCT +
Preference number: 4 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCRSSEY*FLTGIS
Trigger: AGATATGCCCGTCAAAAACCAGTACTCTGAGCTCCT...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGATGAGTTTCTCACATaGGGAGGACATCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFDEFLT*GGHLEE
Trigger: CTCCTCAAGATGTCCTCCCCATGTGAGAAACTCATC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGAAGAATTCATGCTCTaGGTAGGTGCGGGCAATATC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFEEFML*VGAGNI
Trigger: GATATTGCCCGCACCTACCCAGAGCATGAATTCTTC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR TCA 90 bp CATTGTTCTCATCTGGCAGTGAGCTGTTTCTCTTTTCCATGTCCAGAACTTTGTTCTCAATCCGCTGTTTaGGCAGCCGGTTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HCSHLAVSCFSFPCPELCSQSAV*AAGSLF
Trigger: GAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGA...ACAAAGTTCTGGACATGGAAAAGAGAAACAGCTCACTGCCAGATGAGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR GCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTTTTACTCTTCATAGCTaGGTACTCCTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGFTLHS*VLLLQP
Trigger: AGGCTGGAGAAGGAGTACGCAGCTATGAAGAGTAAA...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTTTACTCTTCATAGCTaGGTACTCCTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFFTLHS*VLLLQP
Trigger: AGGCTGGAGAAGGAGTACGCAGCTATGAAGAGTAAA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR GCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGGTTTGATCTCGATCTaGTCCTCCATCTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFGLISI*SSISLL
Trigger: GAGTAAAGAGATGGAGGAGCAGATCGAGATCAAACC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTAGGAGCTCAGAGTACTaGTTTTTGACGGGCATATCT +
Preference number: 4 (lower is better)
Translates to: LLQPANTCDISTPQRKMGRSSEY*FLTGIS
Trigger: AGATATGCCCGTCAAAAACCAGTACTCTGAGCTCCT...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCAGGAGCTCAGAGTACTaGTTTTTGACGGGCATATCT +
Preference number: 4 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFRSSEY*FLTGIS
Trigger: AGATATGCCCGTCAAAAACCAGTACTCTGAGCTCCT...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CCA 90 bp TCTCTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGAAGAATTCATGCTCTaGGTAGGTGCGGGCAATATC +
Preference number: 4 (lower is better)
Translates to: SLLQPANTCDISTPQRKMEEFML*VGAGNI
Trigger: GATATTGCCCGCACCTACCCAGAGCATGAATTCTTC...CATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CCA 90 bp CATTGTTCTCATCTGGCAGTGAGCTGTTTCTCTTTTCCATGTCCAGAACTTTGTGCATACATGGACGTGTaGAAGCTCTGTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: HCSHLAVSCFSFPCPELCAYMDV*KLCERK
Trigger: CTTCCGCTCACAGAGCTTCCACACGTCCATGTATGC...ACAAAGTTCTGGACATGGAAAAGAGAAACAGCTCACTGCCAGATGAGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CAA 90 bp TGTCCTGCGTCTCCAGTTCCACCACGCGCTGCCGCCATTCGCGGCCATCGGCCATCGGCCATGCTGGGCTaGAAGAGCTCCCGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: CPASPVPPRAAAIRGHRPSAMLG*KSSRSR
Trigger: CCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCGA...TGGCCGATGGCCGCGAATGGCGGCAGCGCGTGGTGGAACTGGAGACGCAGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CAA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCTCAGCCTCTGCCTGCTaGCGGCGGCTTTCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: QARGLLISPCQQCGPPGSSASAC*RRLSLS
Trigger: GCTCAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGA...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS GCA 90 bp AGCCGGACACTGCTGCTAGCAGCTGCAGAAGGTGCAGCTGTGGGCTaGGAAGGCAGTTCAGGAGGCTCAGGGGTGGGTGGTGTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: SRTLLLAAAEGAAVG*EGSSGGSGVGGVSG
Trigger: TCCCGAGACACCACCCACCCCTGAGCCTCCTGAACTGCCTTCGCAGCCCACAGCTGCACCTTCTGCAGCTGCTAGCAGCAGTGTCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS GCA 90 bp GCAGCACCTGCTAAGCCGGACACTGCTGCTAGCAGCTGCAGAAGGTaGAGCTGTGGGCTGCGAAGGCAGTTCAGGAGGCTCAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: AAPAKPDTAASSCRR*SCGLRRQFRRLRGG
Trigger: CCCACCCCTGAGCCTCCTGAACTGCCTTCGCAGCCCACAGCTGCACCTTCTGCAGCTGCTAGCAGCAGTGTCCGGCTTAGCAGGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CAA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCCGCACCTTGAGTGCCTaGAGTTCCTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: QARGLLISPCQQCGPPGSRTLSA*SSSCSL
Trigger: CAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCG...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS TCA 90 bp AGGGTGACTGGACTTCGCTGTCCTTGGCTGGCCGATCCAGGCTTCTaGAGAAGCGCGCGTCCCGGGGAGAGAGAGGGTAGAGTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: RVTGLRCPWLADPGF*RSARPGEREGRVGP
Trigger: AGGACCCACTCTACCCTCTCTCTCCCCGGGACGCGCGCTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGTCCAGTCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CCA 90 bp AGCTCCCGGATGTACTGCGATGAATCCGAGTGGTTCAGCTGGCCCTaGATGCGGCCCTCCTCCCTCTGGATCTCCAGCTCTGCGATGCGC +
Preference number: 5 (lower is better)
Translates to: SSRMYCDESEWFSWP*MRPSSLWISSSAMR
Trigger: GCGCATCGCAGAGCTGGAGATCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CCA 90 bp TCGGGAGGATCCCGGGCTCCGCTTAGCGATGCTGAATTGGGCCGCTaGGCCGAATTGCTGTCTCCCTTGGACGAGTCTCGTGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SGGSRAPLSDAELGR*AELLSPLDESRASI
Trigger: GATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGGAGCCCGGGATCCTCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CCA 90 bp GTGGTGTCTCGGGAGGATCCCGGGCTCCGCTTAGCGATGCTGAATTaGGCCGCTGGGCCGAATTGCTGTCTCCCTTGGACGAGTCTCGTG +
Preference number: 5 (lower is better)
Translates to: VVSREDPGLRLAMLN*AAGPNCCLPWTSLV
Trigger: CACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGGAGCCCGGGATCCTCCCGAGACACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CAA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGCGCACCTTGAGTGCCTaGAGTTCCTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGRTLSA*SSSCSL
Trigger: CAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCG...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp AAACGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCACGCACCTTGAGTGCCTaGAGTTCCTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: KRSWRPHPGSTQGMLWAPRTLSA*SSSCSL
Trigger: CAGGCTGCAGGAGGAACTCAAGGCACTCAAGGTGCG...TGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS GCA 90 bp CCCGGGCTCCGCTTAGCGATGCTGAATTGGGCCGCTGGGCCGAATTaGTGTCTCCCTTGGACGAGTCTCGTGCCAGCATCACTTCGGTCA +
Preference number: 5 (lower is better)
Translates to: PGLRLAMLNWAAGPN*CLPWTSLVPASLRS
Trigger: TGACCGAAGTGATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGGAGCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS GCA 90 bp GAGCGTTGTGCAGCACCTGCTAAGCCGGACACTGCTGCTAGCAGCTaGAGAAGGTGCAGCTGTGGGCTGCGAAGGCAGTTCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: ERCAAPAKPDTAASS*RRCSCGLRRQFRRL
Trigger: GAGCCTCCTGAACTGCCTTCGCAGCCCACAGCTGCACCTTCTGCAGCTGCTAGCAGCAGTGTCCGGCTTAGCAGGTGCTGCACAACGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CCA 90 bp TCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTGGTTCAGCTaGCCCTGGATGCGGCCCTCCTCCCTCTGGATCTCCAGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: SFSSRMYCDESEWFS*PWMRPSSLWISSSA
Trigger: CGCAGAGCTGGAGATCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CCA 90 bp CTCGTGCCAGCATCACTTCGGTCACCAGCTTCTCCCCAGATGATGTaGCCTCCCCACAGGGTGACTGGACTTCGCTGTCCTTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LVPASLRSPASPQMM*PPHRVTGLRCPWLA
Trigger: GGCCAGCCAAGGACAGCGAAGTCCAGTCACCCTGTGGGGAGGCCACATCATCTGGGGAGAAGCTGGTGACCGAAGTGATGCTGGCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CAA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTATGGAGCGCATGGACTaGGAGTCGGCTTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGAMERMD*ESASRS
Trigger: GCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCAT...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATTCGGCCATGCTGGGCTaGAAGAGCTCCCGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYSAMLG*KSSRSR
Trigger: CCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCGA...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GAACAGGCAGTGTGCAAAATGGTGGTGGGCAGTGTGGAGGGGCACATGAGGAGCTCAGCCTCTGCCTGCTaGCGGCGGCTTTCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: EQAVCKMVVGSVEGHMRSSASAC*RRLSLS
Trigger: GCTCAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGA...GCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCACACTGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp AGTCCCCACATTTGCTCTTACAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGGGCCGCTGGGCCGAATaGCTGTCTCCCTTGGACGAG +
Preference number: 5 (lower is better)
Translates to: SPHICSYRSSPAMASHCWGRWAE*LSPLDE
Trigger: CTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCC...CCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGTAAGAGCAAATGTGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CCA 90 bp TCGATCTGGTCCTTCAGCTCCCGGATGTACTGCGATGAATCCGAGTaGTTCAGCTGGCCCTGGATGCGGCCCTCCTCCCTCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SIWSFSSRMYCDESE*FSWPWMRPSSLWIS
Trigger: GGAGATCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGAGCTGAAGGACCAGATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GTGAGTGGGCCCCCAGCTTCAGTTGTCCAGGCCCTGGTTGCTATAAGGAGTGGCATGGAGCGCATGGACTaGGAGTCGGCTTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VSGPPASVVQALVAIRSGMERMD*ESASRS
Trigger: GCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCAT...GCCACTCCTTATAGCAACCAGGGCCTGGACAACTGAAGCTGGGGGCCCACTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CAA 90 bp CTAACACGGATAAACACTGCTATGCAGGGCAGGCCTGCCAGTAGGCCCTGCCCCATGGAGCGCATGGACTaGGAGTCGGCTTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LTRINTAMQGRPASRPCPMERMD*ESASRS
Trigger: GCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCAT...GGGGCAGGGCCTACTGGCAGGCCTGCCCTGCATAGCAGTGTTTATCCGTGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCGCCCTCCATGTCCAGTaGCATCAACTCTGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QARGLLISPCQQCGPPGSALHVQ*HQLCLV
Trigger: AACCAGACAGAGTTGATGCAACTGGACATGGAGGGC...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTAACCGCACCTCAGTCTaGAGCTCCTCGATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGANRTSV*SSSIWS
Trigger: GGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTT...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GAGCACACAAGAGGGCCTCCTCAGGGGTACCCTGCTCCAGCCCCCAGGCTTTTTAACCGCACCTCAGTCTaGAGCTCCTCGATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: EHTRGPPQGYPAPAPRLFNRTSV*SSSIWS
Trigger: GGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTT...AAAAAGCCTGGGGGCTGGAGCAGGGTACCCCTGAGGAGGCCCTCTTGTGTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CCA 90 bp AGCTGGATACCAGTGAGGAGCCACTGTTCCTCCGGGAGCCATTCATaGAGCGCATGGACTTGGAGTCGGCTTCCAGGAGCCGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SWIPVRSHCSSGSHS*SAWTWSRLPGAGSA
Trigger: AGCAGAACCGGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGAGGAACAGTGGCTCCTCACTGGTATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 90 bp TCGTTGGCAATTCGGCCCCAGAGAATCCACGTGTCCTCCTCCAGGTaGCTCAGGTTGGAGGAGGCTGAGGAGCTGGATACCAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: SLAIRPQRIHVSSSR*LRLEEAEELDTSEE
Trigger: CTCCTCACTGGTATCCAGCTCCTCAGCCTCCTCCAACCTGAGCCACCTGGAGGAGGACACGTGGATTCTCTGGGGCCGAATTGCCAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATATGGAGCGCATGGACTaGGAGTCGGCTTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYMERMD*ESASRS
Trigger: GCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCAT...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTGCCCTCCATGTCCAGTaGCATCAACTCTGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGALHVQ*HQLCLV
Trigger: AACCAGACAGAGTTGATGCAACTGGACATGGAGGGC...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCCCTCCATGTCCAGTaGCATCAACTCTGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGALHVQ*HQLCLV
Trigger: AACCAGACAGAGTTGATGCAACTGGACATGGAGGGC...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTGACTAGGAGGTCTGTTCGAAGCCTTTaGATCTCGATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGPTQQGLPCPKGKLTRRSVRSL*ISICSS
Trigger: GGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAGA...CCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CGGAGCTGGAGGCCCCACCCAGGAAGCACCCAGGGAATGCTGTGGGCACCATTCTCTGTTCGAAGCCTTTaGATCTCGATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSWRPHPGSTQGMLWAPFSVRSL*ISICSS
Trigger: GGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAGA...GAATGGTGCCCACAGCATTCCCTGGGTGCTTCCTGGGTGGGGCCTCCAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GTGGGCAGTGTGGAGGGGCACATGAGGAGCACACAAGAGGGCCTCCTCAGGGGTGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VGSVEGHMRSTQEGLLRGVSIRC*SSRFSV
Trigger: AACAGAGAACCGGCTGCTCAAACAGCGGATTGAGAC...ACCCCTGAGGAGGCCCTCTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CAAGCTCGCGGACTGCTGATCTCTCCCTGCCAGCAATGCGGGCCTCCAGGCTCCAGTCGAGCTACACTGTaGTCTCACTACTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: QARGLLISPCQQCGPPGSSRATL*SHYCQL
Trigger: GAGTTGGCAGTAGTGAGACAACAGTGTAGCTCGACT...GGAGCCTGGAGGCCCGCATTGCTGGCAGGGAGAGATCAGCAGTCCGCGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGAVSIRC*SSRFSV
Trigger: AACAGAGAACCGGCTGCTCAAACAGCGGATTGAGAC...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CTGGGCCCCACCCAGCAGGGCCTCCCTTGTCCCAAAGGGAAGCTGACTAGGAGGGTTTTCCTGCTGTTCTaGCAACTGCCGAATGGTACT +
Preference number: 5 (lower is better)
Translates to: LGPTQQGLPCPKGKLTRRVFLLF*QLPNGT
Trigger: AGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAAC...CCTCCTAGTCAGCTTCCCTTTGGGACAAGGGAGGCCCTGCTGGGTGGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS TCA 90 bp GGTTCTGCTCCTCGAGCTTGGCCAGTAGTTCTAGCTCATCTGGGCTaGGATTCTCGGAGTCAGAGGTTGGGGAGCAGGTGGGTGCTGACA +
Preference number: 5 (lower is better)
Translates to: GSAPRAWPVVLAHLG*DSRSQRLGSRWVLT
Trigger: TGTCAGCACCCACCTGCTCCCCAACCTCTGACTCCGAGAATCTCAGCCCAGATGAGCTAGAACTACTGGCCAAGCTCGAGGAGCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS GCA 90 bp GAGTACTGGTTTTTGACGGGCATATCTGTGGCACTGCACAGGAGCTaGCAGACGATGGCCCGAAAGTGGTGTGGGATGCCCTTCCGGATC +
Preference number: 5 (lower is better)
Translates to: EYWFLTGISVALHRS*QTMARKWCGMPFRI
Trigger: GATCCGGAAGGGCATCCCACACCACTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGCCACAGATATGCCCGTCAAAAACCAGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp CCCCTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGTCAGAGTACTGGTTTTaGACGGGCATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: PLTAHTPGGMSCRQDGLGSEYWF*TGISVA
Trigger: TGCCACAGATATGCCCGTCAAAAACCAGTACTCTGA...CCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CCTCCACACGGTTCAGCAGGTTGCGGTGAATGTTGTCCTGCGTCTCCAGTTCCAGCCTTGAGGACCAGCTaGTCTGGGCAGCTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: PPHGSAGCGECCPASPVPALRTS*SGQLSN
Trigger: GTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGC...TGGAACTGGAGACGCAGGACAACATTCACCGCAACCTGCTGAACCGTGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CAA 90 bp CTGACTGCTCACACCCCAGGTGGTATGTCCTGCAGACAGGATGGGCTGGGGGCTTCAGAGTACTGGTTTTaGACGGGCATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LTAHTPGGMSCRQDGLGASEYWF*TGISVA
Trigger: TGCCACAGATATGCCCGTCAAAAACCAGTACTCTGA...AGCCCCCAGCCCATCCTGTCTGCAGGACATACCACCTGGGGTGTGAGCAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGTCGGCCATGCTGGGCTaGAAGAGCTCCCGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSESAMLG*KSSRSR
Trigger: CCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCGA...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GAGGAAGCTTCCTGCTTATTAACAAGTCCTGGGGCCTCCCCACTTTCGGCCCTTGCCTTGAGGACCAGCTaGTCTGGGCAGCTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: EEASCLLTSPGASPLSALALRTS*SGQLSN
Trigger: GTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGC...AAGGGCCGAAAGTGGGGAGGCCCCAGGACTTGTTAATAAGCAGGAAGCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATTGCAGCCTGGCTACATaGTTCTCATCTGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYCSLAT*FSSGSE
Trigger: CTCACTGCCAGATGAGAACAATGTAGCCAGGCTGCA...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp AGAGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTAGTCGAGCTACACTGTaGTCTCACTACTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: RDFPGLSWFPLTAHTPGGSRATL*SHYCQL
Trigger: GAGTTGGCAGTAGTGAGACAACAGTGTAGCTCGACT...ACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGGCTCAGAGTGGGGCTaGCCATGGTGGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCGSEWG*PWWAGS
Trigger: TGAGCCTGCCCACCATGGCAAGCCCCACTCTGAGCC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177053.8
CDS CCA 90 bp ATATCTGTGGCACTGCACAGGAGCTGCCAGACGATGGCCCGAAAGTaGTGTGGGATGCCCTTCCGGATCAGCTCCTTGAGTAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: ISVALHRSCQTMARK*CGMPFRISSLSSFS
Trigger: GGAAAAACTACTCAAGGAGCTGATCCGGAAGGGCATCCCACACCACTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGCCACAGATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTTCGGCCATGCTGGGCTaGAAGAGCTCCCGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: LLQPANTCDISTPQRKMGSAMLG*KSSRSR
Trigger: CCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCGA...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTCGGCCATGCTGGGCTaGAAGAGCTCCCGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFSAMLG*KSSRSR
Trigger: CCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCGA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp CGCAAACGCACAGTCATGAGCTCGTCCTGTAACTCGCCCAGGACCAACTTCCGCTCTGTTCGAAGCCTTTaGATCTCGATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RKRTVMSSSCNSPRTNFRSVRSL*ISICSS
Trigger: GGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAGA...GCGGAAGTTGGTCCTGGGCGAGTTACAGGACGAGCTCATGACTGTGCGTTTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS-3UTR CAA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTTCAGCCTCTGCCTGCTaGCGGCGGCTTTCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LLQPANTCDISTPQRKMGSASAC*RRLSLS
Trigger: GCTCAGCGAAAGCCGCCGCAAGCAGGCAGAGGCTGA...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS GCA 90 bp GACATGCCCTCCATGTCCAGTTGCATCAACTCTGTCTGGTTCACTTaGAGCAGGGCAAGGCCTACTCGGAACACAATCTCCAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: DMPSMSSCINSVWFT*SRARPTRNTISSPS
Trigger: TGAGGGACTGGAGATTGTGTTCCGAGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS GCA 90 bp GGGATGACTCTCTGGAAGTACTGGGACATGCCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTCACTTGCAGCAGGGCAAGGCCTACT +
Preference number: 5 (lower is better)
Translates to: GMTLWKYWDMPSMSS*INSVWFTCSRARPT
Trigger: AGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTCCCAGTACTTCCAGAGAGTCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS GCA 90 bp ATGCCAACTGGGGAATGCGCTCCCACGCGGGGTTTGATCTCGATCTaGTCCTCCATCTCTTTACTCTTCATAGCTGCGTACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: MPTGECAPTRGLISI*SSISLLFIAAYSFS
Trigger: GGAGAAGGAGTACGCAGCTATGAAGAGTAAAGAGATGGAGGAGCAGATCGAGATCAAACCCCGCGTGGGAGCGCATTCCCCAGTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 90 bp GTCTCTGTTTCTCGTAACCGTGACTGCTCCAGTTCTGTCTCCAGGTaGGCCACAAAGTCCTCTGTGAGGCGAGGGTTTTCCTTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: VSVSRNRDCSSSVSR*ATKSSVRRGFSFSR
Trigger: CCTAGAGAAGGAAAACCCTCGCCTCACAGAGGACTTTGTGGCCCACCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGAAACAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
CDS CCA 90 bp GTCTCTGTTTCTCGTAACCGTGACTGCTCCAGTTCTGTCTCCAGGTaGGCCACAAAGTCCTCTGTGAGGCGAGGGTTTTCCTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: VSVSRNRDCSSSVSR*ATKSSVRRGFSCCS
Trigger: AGAACAGCAGGAAAACCCTCGCCTCACAGAGGACTTTGTGGCCCACCTGGAGACAGAACTGGAGCAGTCACGGTTACGAGAAACAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCATGGAGCGCATGGACTaGGAGTCGGCTTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCMERMD*ESASRS
Trigger: GCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCAT...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp AGACTTCCCAGGTCTGAGCTGGTTCCCCCTGACTGCTCACACCCCAGGTGGTATTCAGAGTACTGGTTTTaGACGGGCATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RLPRSELVPPDCSHPRWYSEYWF*TGISVA
Trigger: TGCCACAGATATGCCCGTCAAAAACCAGTACTCTGA...ATACCACCTGGGGTGTGAGCAGTCAGGGGGAACCAGCTCAGACCTGGGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GGGGTGAAGGGTAAAGGAGCCTGGGGAGCATTGATGGACTTTGGCACCATTCTCGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: GVKGKGAWGALMDFGTILVSIRC*SSRFSV
Trigger: AACAGAGAACCGGCTGCTCAAACAGCGGATTGAGAC...GAGAATGGTGCCAAAGTCCATCAATGCTCCCCAGGCTCCTTTACCCTTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GCAATCTTTCTAGTCCCCACATTTGCTCTTACAGGAGTTCCCCTGCCATGGCCTAACCGCACCTCAGTCTaGAGCTCCTCGATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: AIFLVPTFALTGVPLPWPNRTSV*SSSIWS
Trigger: GGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTT...AGGCCATGGCAGGGGAACTCCTGTAAGAGCAAATGTGGGGACTAGAAAGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS-3UTR CAA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGCTCCCACGCGGGGTTaGATCTCGATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFAPTRG*ISICSS
Trigger: GGAGGAGCAGATCGAGATCAAACCCCGCGTGGGAGC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 90 bp CTCTGGGTAGGTGCGGGCAATATCCCTCCTGATGAGTTTCTCACATaGGGAGGACATCTTGAGGAGCTCAGAGTACTGGTTTTTGACGGG +
Preference number: 5 (lower is better)
Translates to: LWVGAGNIPPDEFLT*GGHLEELRVLVFDG
Trigger: CCCGTCAAAAACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCATGTGAGAAACTCATCAGGAGGGATATTGCCCGCACCTACCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 90 bp AAGTACTGGGACATGCCCTCCATGTCCAGTTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCAAGGCCTACTCGGAACACAATCTCC +
Preference number: 5 (lower is better)
Translates to: KYWDMPSMSSCINSV*FTCSRARPTRNTIS
Trigger: GGAGATTGTGTTCCGAGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTCCCAGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGCCTTGAGGACCAGCTaGTCTGGGCAGCTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCALRTS*SGQLSN
Trigger: GTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGTTGTGTGGCCAGCTTaGAGGACATGCCAACTGGGG +
Preference number: 5 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCVVWPA*RTCQLG
Trigger: CCCCAGTTGGCATGTCCTCAAAGCTGGCCACACAAC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS GCA 90 bp GCGAGGGTTTTCCTGCTGTTCTTGCAACTGCCGAATGGTACTCTGTaGTTTCTGAAGGTCCTCTGCAGTCGAGCTACACTGTTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: ARVFLLFLQLPNGTL*FLKVLCSRATLLSH
Trigger: GTGAGACAACAGTGTAGCTCGACTGCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAACCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CCA 90 bp CAGGACGATGCATACATGGACGTGTGGAAGCTCTGTGAGCGGAAGTaGGTATTCAGGTCCGGAAGCTGCTCCTGTAGCATGTATTCAAAC +
Preference number: 5 (lower is better)
Translates to: QDDAYMDVWKLCERK*VFRSGSCSCSMYSN
Trigger: GTTTGAATACATGCTACAGGAGCAGCTTCCGGACCTGAATACCCACTTCCGCTCACAGAGCTTCCACACGTCCATGTATGCATCGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTGCCTTGAGGACCAGCTaGTCTGGGCAGCTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: LLQPANTCDISTPQRKMGALRTS*SGQLSN
Trigger: GTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGC...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGCCTTGAGGACCAGCTaGTCTGGGCAGCTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFALRTS*SGQLSN
Trigger: GTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp TCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGAGATAAGGGGAGGGTCTGTTCGAAGCCTTTaGATCTCGATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: STLTGQRPWEYSEEIRGGSVRSL*ISICSS
Trigger: GGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAGA...CCCTCCCCTTATCTCCTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLVSIRC*SSRFSV
Trigger: AACAGAGAACCGGCTGCTCAAACAGCGGATTGAGAC...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp AGGAATAAATGGACCGAGGCTGAGAACTCCCAAGTAGCGGGGTTCTCTCTTTTAAACCGCACCTCAGTCTaGAGCTCCTCGATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: RNKWTEAENSQVAGFSLLNRTSV*SSSIWS
Trigger: GGACCAGATCGAGGAGCTCAAGACTGAGGTGCGGTT...TAAAAGAGAGAACCCCGCTACTTGGGAGTTCTCAGCCTCGGTCCATTTATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCGTTGTGTGGCCAGCTTaGAGGACATGCCAACTGGGG +
Preference number: 5 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFVVWPA*RTCQLG
Trigger: CCCCAGTTGGCATGTCCTCAAAGCTGGCCACACAAC...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 90 bp TTTAGGGTTGTACTTGACCTGATAAGCCTTGAGGACCAGCTTGTCTaGGCAGCTGTCAAACTGGTGGGGGATGACTCTCTGGAAGTACTG +
Preference number: 5 (lower is better)
Translates to: FRVVLDLISLEDQLV*AAVKLVGDDSLEVL
Trigger: CAGTACTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGCTTATCAGGTCAAGTACAACCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp GGTGCTAATATCCAGTCCAAGTTGCCCCTCCTTCCTCAGACCTGTAGTTCCTGGTCAGAGTACTGGTTTTaGACGGGCATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GANIQSKLPLLPQTCSSWSEYWF*TGISVA
Trigger: TGCCACAGATATGCCCGTCAAAAACCAGTACTCTGA...CCAGGAACTACAGGTCTGAGGAAGGAGGGGCAACTTGGACTGGATATTAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp ACTTTGGCACCATTCTCAACTCTGACTGGGCAGAGACCATGGGAATACTCTGAGGCCCTCCATGTCCAGTaGCATCAACTCTGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: TLAPFSTLTGQRPWEYSEALHVQ*HQLCLV
Trigger: AACCAGACAGAGTTGATGCAACTGGACATGGAGGGC...CTCAGAGTATTCCCATGGTCTCTGCCCAGTCAGAGTTGAGAATGGTGCCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCGCCCTCCATGTCCAGTaGCATCAACTCTGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCALHVQ*HQLCLV
Trigger: AACCAGACAGAGTTGATGCAACTGGACATGGAGGGC...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp AGTTACAGAGGCACAGAATTCCTTAGTACTGTGGAGCAGCAAGCTCGCGGACTGAGTCGAGCTACACTGTaGTCTCACTACTGCCAACTC +
Preference number: 5 (lower is better)
Translates to: SYRGTEFLSTVEQQARGLSRATL*SHYCQL
Trigger: GAGTTGGCAGTAGTGAGACAACAGTGTAGCTCGACT...CAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGAATTCTGTGCCTCTGTAACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS TCA 90 bp TTTTCCTGCTGTTCTTGCAACTGCCGAATGGTACTCTGTGCTTTCTaGAGGTCCTCTGCAGTCGAGCTACACTGTTGTCTCACTACTGCC +
Preference number: 5 (lower is better)
Translates to: FSCCSCNCRMVLCAF*RSSAVELHCCLTTA
Trigger: GGCAGTAGTGAGACAACAGTGTAGCTCGACTGCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS GCA 90 bp TTCTTGCAACTGCCGAATGGTACTCTGTGCTTTCTGAAGGTCCTCTaGAGTCGAGCTACACTGTTGTCTCACTACTGCCAACTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: FLQLPNGTLCFLKVL*SRATLLSHYCQLPF
Trigger: AAACGGGAGTTGGCAGTAGTGAGACAACAGTGTAGCTCGACTGCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTTGCAGCCTGGCTACATaGTTCTCATCTGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LLQPANTCDISTPQRKMGCSLAT*FSSGSE
Trigger: CTCACTGCCAGATGAGAACAATGTAGCCAGGCTGCA...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS GCA 90 bp TGTTTGAGCAGCCGGTTCTCTGTTCGAAGCCTTTTGATCTCGATCTaGTCCTCCATCTCTTTACTCTTCATAGCTGCGTACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CLSSRFSVRSLLISI*SSISLLFIAAYSFS
Trigger: GGAGAAGGAGTACGCAGCTATGAAGAGTAAAGAGATGGAGGAGCAGATCGAGATCAAAAGGCTTCGAACAGAGAACCGGCTGCTCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS-3UTR CAA 90 bp GGAATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTCAGAGTACTGGTTTTaGACGGGCATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GIHTISVIYWRSPHDLGCSEYWF*TGISVA
Trigger: TGCCACAGATATGCCCGTCAAAAACCAGTACTCTGA...GCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp ATCCACACTATTTCAGTGATTTATTGGAGGTCGCCCCATGACTTGGGGTGCTTCTCAGAGTACTGGTTTTaGACGGGCATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: IHTISVIYWRSPHDLGCFSEYWF*TGISVA
Trigger: TGCCACAGATATGCCCGTCAAAAACCAGTACTCTGA...GAAGCACCCCAAGTCATGGGGCGACCTCCAATAAATCACTGAAATAGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS-3UTR CAA 90 bp CTTTTACAGCCAGCCAACACGTGTGATATTAGTACTCCCCAGAGGAAGATGGGTGTTTTCCTGCTGTTCTaGCAACTGCCGAATGGTACT +
Preference number: 5 (lower is better)
Translates to: LLQPANTCDISTPQRKMGVFLLF*QLPNGT
Trigger: AGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAAC...ACCCATCTTCCTCTGGGGAGTACTAATATCACACGTGTTGGCTGGCTGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CCA 72 bp CGGGAGGATCCCGGGCTCCGCTTAGCGATGCTGAATTaGGCCGCTGGGCCGAATTGCTGTCTCCCTTGGACG +
Preference number: 6 (lower is better)
Translates to: REDPGLRLAMLN*AAGPNCCLPWT
Trigger: CGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGGAGCCCGGGATCCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS TCA 72 bp GGACTTCGCTGTCCTTGGCTGGCCGATCCAGGCTTCTaGAGAAGCGCGCGTCCCGGGGAGAGAGAGGGTAGA +
Preference number: 6 (lower is better)
Translates to: GLRCPWLADPGF*RSARPGEREGR
Trigger: TCTACCCTCTCTCTCCCCGGGACGCGCGCTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CAA 72 bp TCGGGAGGATCCCGGGCTCCGCTTAGCGATGCTGAATaGGGCCGCTGGGCCGAATTGCTGTCTCCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: SGGSRAPLSDAE*GRWAELLSPLD
Trigger: GTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGGAGCCCGGGATCCTCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CAA 90 bp GGTGGTGTCTCGGGAGGATCCCGGGCTCCGCTTAGCGATGCTGAATaGGGCCGCTGGGCCGAATTGCTGTCTCCCTTGGACGAGTCTCGT +
Preference number: 6 (lower is better)
Translates to: GGVSGGSRAPLSDAE*GRWAELLSPLDESR
Trigger: ACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGGAGCCCGGGATCCTCCCGAGACACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CAA 90 bp TCCCGGGCTCCGCTTAGCGATGCTGAATTGGGCCGCTGGGCCGAATaGCTGTCTCCCTTGGACGAGTCTCGTGCCAGCATCACTTCGGTC +
Preference number: 6 (lower is better)
Translates to: SRAPLSDAELGRWAE*LSPLDESRASITSV
Trigger: GACCGAAGTGATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGGAGCCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS GCA 72 bp GCTAAGCCGGACACTGCTGCTAGCAGCTGCAGAAGGTaGAGCTGTGGGCTGCGAAGGCAGTTCAGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: AKPDTAASSCRR*SCGLRRQFRRL
Trigger: GAGCCTCCTGAACTGCCTTCGCAGCCCACAGCTGCACCTTCTGCAGCTGCTAGCAGCAGTGTCCGGCTTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS GCA 72 bp GCAGCACCTGCTAAGCCGGACACTGCTGCTAGCAGCTaGAGAAGGTGCAGCTGTGGGCTGCGAAGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: AAPAKPDTAASS*RRCSCGLRRQF
Trigger: GAACTGCCTTCGCAGCCCACAGCTGCACCTTCTGCAGCTGCTAGCAGCAGTGTCCGGCTTAGCAGGTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CCA 72 bp CCAGTGAGGAGCCACTGTTCCTCCGGGAGCCATTCATaGAGCGCATGGACTTGGAGTCGGCTTCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: PVRSHCSSGSHS*SAWTWSRLPGA
Trigger: GGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGAGGAACAGTGGCTCCTCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp TCCCGGATGTACTGCGATGAATCCGAGTGGTTCAGCTaGCCCTGGATGCGGCCCTCCTCCCTCTGGATCTCC +
Preference number: 6 (lower is better)
Translates to: SRMYCDESEWFS*PWMRPSSLWIS
Trigger: GGAGATCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACATCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CAA 72 bp CTGTTCCTCCGGGAGCCATTCATGGAGCGCATGGACTaGGAGTCGGCTTCCAGGAGCCGGTTCTGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: LFLREPFMERMD*ESASRSRFCSS
Trigger: CGAGGAGCAGAACCGGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGAGGAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp TGTTCCTCCGGGAGCCATTCATGGAGCGCATGGACTTaGAGTCGGCTTCCAGGAGCCGGTTCTGCTCCTCGA +
Preference number: 6 (lower is better)
Translates to: CSSGSHSWSAWT*SRLPGAGSAPR
Trigger: TCGAGGAGCAGAACCGGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGAGGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp AGCCACTGTTCCTCCGGGAGCCATTCATGGAGCGCATaGACTTGGAGTCGGCTTCCAGGAGCCGGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SHCSSGSHSWSA*TWSRLPGAGSA
Trigger: AGCAGAACCGGCTCCTGGAAGCCGACTCCAAGTCCATGCGCTCCATGAATGGCTCCCGGAGGAACAGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp GCACTGCACAGGAGCTGCCAGACGATGGCCCGAAAGTaGTGTGGGATGCCCTTCCGGATCAGCTCCTTGAGT +
Preference number: 6 (lower is better)
Translates to: ALHRSCQTMARK*CGMPFRISSLS
Trigger: ACTCAAGGAGCTGATCCGGAAGGGCATCCCACACCACTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 72 bp GCTGAATTGGGCCGCTGGGCCGAATTGCTGTCTCCCTaGGACGAGTCTCGTGCCAGCATCACTTCGGTCACC +
Preference number: 6 (lower is better)
Translates to: AELGRWAELLSP*DESRASITSVT
Trigger: GGTGACCGAAGTGATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CAA 72 bp CCGCTTAGCGATGCTGAATTGGGCCGCTGGGCCGAATaGCTGTCTCCCTTGGACGAGTCTCGTGCCAGCATC +
Preference number: 6 (lower is better)
Translates to: PLSDAELGRWAE*LSPLDESRASI
Trigger: GATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS TCA 72 bp GGTAGATACAGAGTCCCAGCTCGGCCATGCTGGGCTTaGAGAGCTCCCGTAGCCGGTACTCCTGCATCAGTC +
Preference number: 6 (lower is better)
Translates to: GRYRVPARPCWA*RAPVAGTPASV
Trigger: GACTGATGCAGGAGTACCGGCTACGGGAGCTCTTCAAGCCCAGCATGGCCGAGCTGGGACTCTGTATCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS GCA 72 bp CTGGGCCGAATTGCTGTCTCCCTTGGACGAGTCTCGTaGCAGCATCACTTCGGTCACCAGCTTCTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: LGRIAVSLGRVS*QHHFGHQLLPR
Trigger: TCTGGGGAGAAGCTGGTGACCGAAGTGATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS GCA 72 bp CGCTTAGCGATGCTGAATTGGGCCGCTGGGCCGAATTaGTGTCTCCCTTGGACGAGTCTCGTGCCAGCATCA +
Preference number: 6 (lower is better)
Translates to: RLAMLNWAAGPN*CLPWTSLVPAS
Trigger: TGATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CCA 72 bp AGAGAATCCACGTGTCCTCCTCCAGGTGGCTCAGGTTaGAGGAGGCTGAGGAGCTGGATACCAGTGAGGAGC +
Preference number: 6 (lower is better)
Translates to: RESTCPPPGGSG*RRLRSWIPVRS
Trigger: GCTCCTCACTGGTATCCAGCTCCTCAGCCTCCTCCAACCTGAGCCACCTGGAGGAGGACACGTGGATTCTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp ATGTACTGCGATGAATCCGAGTGGTTCAGCTGGCCCTaGATGCGGCCCTCCTCCCTCTGGATCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: MYCDESEWFSWP*MRPSSLWISSS
Trigger: AGAGCTGGAGATCCAGAGGGAGGAGGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATCGCAGTACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CCA 72 bp GCATCACTTCGGTCACCAGCTTCTCCCCAGATGATGTaGCCTCCCCACAGGGTGACTGGACTTCGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: ASLRSPASPQMM*PPHRVTGLRCP
Trigger: AGGACAGCGAAGTCCAGTCACCCTGTGGGGAGGCCACATCATCTGGGGAGAAGCTGGTGACCGAAGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS CAA 90 bp CTTAGCGATGCTGAATTGGGCCGCTGGGCCGAATTGCTGTCTCCCTaGGACGAGTCTCGTGCCAGCATCACTTCGGTCACCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LSDAELGRWAELLSP*DESRASITSVTSFS
Trigger: GGAGAAGCTGGTGACCGAAGTGATGCTGGCACGAGACTCGTCCAAGGGAGACAGCAATTCGGCCCAGCGGCCCAATTCAGCATCGCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176645.2
CDS GCA 72 bp TTTTTGACGGGCATATCTGTGGCACTGCACAGGAGCTaGCAGACGATGGCCCGAAAGTGGTGTGGGATGCCC +
Preference number: 6 (lower is better)
Translates to: FLTGISVALHRS*QTMARKWCGMP
Trigger: GGGCATCCCACACCACTTTCGGGCCATCGTCTGGCAGCTCCTGTGCAGTGCCACAGATATGCCCGTCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS TCA 72 bp CCAGTTCTGTCTCCAGGTGGGCCACAAAGTCCTCTGTaGGGCGAGGGTTTTCCTGCTGTTCTTGCAACTGCC +
Preference number: 6 (lower is better)
Translates to: PVLSPGGPQSPL*GEGFPAVLATA
Trigger: GGCAGTTGCAAGAACAGCAGGAAAACCCTCGCCTCACAGAGGACTTTGTGGCCCACCTGGAGACAGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS GCA 72 bp ATGCTGGGCTTGAAGAGCTCCCGTAGCCGGTACTCCTaGATCAGTCGCACGAATACACAGAAGGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: MLGLKSSRSRYS*ISRTNTQKASS
Trigger: GGAAGAGGCCTTCTGTGTATTCGTGCGACTGATGCAGGAGTACCGGCTACGGGAGCTCTTCAAGCCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp TTGAGGACCAGCTTGTCTGGGCAGCTGTCAAACTGGTaGGGGATGACTCTCTGGAAGTACTGGGACATGCCC +
Preference number: 6 (lower is better)
Translates to: LRTSLSGQLSNW*GMTLWKYWDMP
Trigger: GGGCATGTCCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp GCCTTGAGGACCAGCTTGTCTGGGCAGCTGTCAAACTaGTGGGGGATGACTCTCTGGAAGTACTGGGACATG +
Preference number: 6 (lower is better)
Translates to: ALRTSLSGQLSN*WGMTLWKYWDM
Trigger: CATGTCCCAGTACTTCCAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 72 bp ACCTCCCGATCAACCAGGGAGTATGCCTTCATGACATaGAAGAGGACTTCCTGGCCCAGGCTGTCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: TSRSTREYAFMT*KRTSWPRLSWP
Trigger: AGGCCAGGACAGCCTGGGCCAGGAAGTCCTCTTCAATGTCATGAAGGCATACTCCCTGGTTGATCGGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 90 bp GGACATGCCCTCCATGTCCAGTTGCATCAACTCTGTCTGGTTCACTaGCAGCAGGGCAAGGCCTACTCGGAACACAATCTCCAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: GHALHVQLHQLCLVH*QQGKAYSEHNLQSL
Trigger: GAGGGACTGGAGATTGTGTTCCGAGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 90 bp GGGGATGACTCTCTGGAAGTACTGGGACATGCCCTCCATGTCCAGTaGCATCAACTCTGTCTGGTTCACTTGCAGCAGGGCAAGGCCTAC +
Preference number: 6 (lower is better)
Translates to: GDDSLEVLGHALHVQ*HQLCLVHLQQGKAY
Trigger: GTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTCCCAGTACTTCCAGAGAGTCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 90 bp TGTGCCCGTGTCACCTGCCCCTTCTCTAGGGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTTCGAAGCCTTTTGATCTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: CARVTCPFSRVSIRC*SSRFSVRSLLISIC
Trigger: GCAGATCGAGATCAAAAGGCTTCGAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGACCCTAGAGAAGGGGCAGGTGACACGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS CAA 90 bp TCAGCCAAGGCCGCGCTCTCCTTCTCTAGGGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTTCGAAGCCTTTTGATCTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: SAKAALSFSRVSIRC*SSRFSVRSLLISIC
Trigger: GCAGATCGAGATCAAAAGGCTTCGAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGACCCTAGAGAAGGAGAGCGCGGCCTTGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176149.9
CDS TCA 72 bp CCAGTTCTGTCTCCAGGTGGGCCACAAAGTCCTCTGTaGGGCGAGGGTTTTCCTTCTCTAGGGTCTCAATCC +
Preference number: 6 (lower is better)
Translates to: PVLSPGGPQSPL*GEGFPSLGSQS
Trigger: GGATTGAGACCCTAGAGAAGGAAAACCCTCGCCTCACAGAGGACTTTGTGGCCCACCTGGAGACAGAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
CDS GCA 72 bp GGGGAATGCGCTCCCACGCGGGGTTTGATCTCGATCTaGTCCTCCATCTCTTTACTCTTCATAGCTGCGTAC +
Preference number: 6 (lower is better)
Translates to: GECAPTRGLISI*SSISLLFIAAY
Trigger: GTACGCAGCTATGAAGAGTAAAGAGATGGAGGAGCAGATCGAGATCAAACCCCGCGTGGGAGCGCATTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp GCATACATGGACGTGTGGAAGCTCTGTGAGCGGAAGTaGGTATTCAGGTCCGGAAGCTGCTCCTGTAGCATG +
Preference number: 6 (lower is better)
Translates to: AYMDVWKLCERK*VFRSGSCSCSM
Trigger: CATGCTACAGGAGCAGCTTCCGGACCTGAATACCCACTTCCGCTCACAGAGCTTCCACACGTCCATGTATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp GACATGCCCTCCATGTCCAGTTGCATCAACTCTGTCTaGTTCACTTGCAGCAGGGCAAGGCCTACTCGGAAC +
Preference number: 6 (lower is better)
Translates to: DMPSMSSCINSV*FTCSRARPTRN
Trigger: GTTCCGAGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp AACCGCCGGGTACCTGCTGTTCTTGCAACTGCCGAATaGTACTCTGTGCTTTCTGAAGGTCCTCTGCAGTCG +
Preference number: 6 (lower is better)
Translates to: NRRVPAVLATAE*YSVLSEGPLQS
Trigger: CGACTGCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAGAACAGCAGGTACCCGGCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176764.9
CDS CAA 72 bp GCCGCGCTCTCCTTCTCTAGGGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTTCGAAGCCTTTTGATC +
Preference number: 6 (lower is better)
Translates to: AALSFSRVSIRC*SSRFSVRSLLI
Trigger: GATCAAAAGGCTTCGAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGACCCTAGAGAAGGAGAGCGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176149.9
CDS CAA 72 bp GACATGCCAACTGGGGAATGCGCTCCCACGCGGGGTTaGATCTCGATCTGCTCCTCCATCTCTTTACTCTTC +
Preference number: 6 (lower is better)
Translates to: DMPTGECAPTRG*ISICSSISLLF
Trigger: GAAGAGTAAAGAGATGGAGGAGCAGATCGAGATCAAACCCCGCGTGGGAGCGCATTCCCCAGTTGGCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 90 bp GTGGGCCACAAAGTCCTCTGTGAGGCGAGGGTTTTCCTGCTGTTCTaGCAACTGCCGAATGGTACTCTGTGCTTTCTGAAGGTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: VGHKVLCEARVFLLF*QLPNGTLCFLKVLC
Trigger: GCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAACCCTCGCCTCACAGAGGACTTTGTGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CAA 90 bp AGCTTTGAGGACATGCCAACTGGGGAATGCGCTCCCACGCGGGGTTaGATCTCGATCTGCTCCTCCATCTCTTTACTCTTCATAGCTGCG +
Preference number: 6 (lower is better)
Translates to: SFEDMPTGECAPTRG*ISICSSISLLFIAA
Trigger: CGCAGCTATGAAGAGTAAAGAGATGGAGGAGCAGATCGAGATCAAACCCCGCGTGGGAGCGCATTCCCCAGTTGGCATGTCCTCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS TCA 72 bp ACATGCCAACTGGGGAATGCGCTCCCACGCGGGGTTTaGTCTCGATCTGCTCCTCCATCTCTTTACTCTTCA +
Preference number: 6 (lower is better)
Translates to: TCQLGNALPRGV*SRSAPPSLYSS
Trigger: TGAAGAGTAAAGAGATGGAGGAGCAGATCGAGATCAAACCCCGCGTGGGAGCGCATTCCCCAGTTGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS GCA 72 bp CTCTGGAAGTACTGGGACATGCCCTCCATGTCCAGTTaGATCAACTCTGTCTGGTTCACTTGCAGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LWKYWDMPSMSS*INSVWFTCSRA
Trigger: TGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTCCCAGTACTTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp GTACTTGACCTGATAAGCCTTGAGGACCAGCTTGTCTaGGCAGCTGTCAAACTGGTGGGGGATGACTCTCTG +
Preference number: 6 (lower is better)
Translates to: VLDLISLEDQLV*AAVKLVGDDSL
Trigger: CAGAGAGTCATCCCCCACCAGTTTGACAGCTGCCCAGACAAGCTGGTCCTCAAGGCTTATCAGGTCAAGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp GGCGAGGGTTTTCCTGCTGTTCTTGCAACTGCCGAATaGTACTCTGTGCTTTCTGAAGGTCCTCTGCAGTCG +
Preference number: 6 (lower is better)
Translates to: GEGFPAVLATAE*YSVLSEGPLQS
Trigger: CGACTGCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAACCCTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3
CDS CAA 72 bp TCTCTGGAAGTACTGGGACATGCCCTCCATGTCCAGTaGCATCAACTCTGTCTGGTTCACTTGCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: SLEVLGHALHVQ*HQLCLVHLQQG
Trigger: GCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAGGGCATGTCCCAGTACTTCCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 72 bp GTCACCTGCCCCTTCTCTAGGGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTTCGAAGCCTTTTGATC +
Preference number: 6 (lower is better)
Translates to: VTCPFSRVSIRC*SSRFSVRSLLI
Trigger: GATCAAAAGGCTTCGAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGACCCTAGAGAAGGGGCAGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS GCA 72 bp TCCATGTCCAGTTGCATCAACTCTGTCTGGTTCACTTaGAGCAGGGCAAGGCCTACTCGGAACACAATCTCC +
Preference number: 6 (lower is better)
Translates to: SMSSCINSVWFT*SRARPTRNTIS
Trigger: GGAGATTGTGTTCCGAGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp TCACATGGGGAGGACATCTTGAGGAGCTCAGAGTACTaGTTTTTGACGGGCATATCTGTGGCACTGCACAGG +
Preference number: 6 (lower is better)
Translates to: SHGEDILRSSEY*FLTGISVALHR
Trigger: CCTGTGCAGTGCCACAGATATGCCCGTCAAAAACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CCA 72 bp GGTGCGGGCAATATCCCTCCTGATGAGTTTCTCACATaGGGAGGACATCTTGAGGAGCTCAGAGTACTGGTT +
Preference number: 6 (lower is better)
Translates to: GAGNIPPDEFLT*GGHLEELRVLV
Trigger: AACCAGTACTCTGAGCTCCTCAAGATGTCCTCCCCATGTGAGAAACTCATCAGGAGGGATATTGCCCGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 72 bp CTCCATGTCCAGTTGCATCAACTCTGTCTGGTTCACTaGCAGCAGGGCAAGGCCTACTCGGAACACAATCTC +
Preference number: 6 (lower is better)
Translates to: LHVQLHQLCLVH*QQGKAYSEHNL
Trigger: GAGATTGTGTTCCGAGTAGGCCTTGCCCTGCTGCAAGTGAACCAGACAGAGTTGATGCAACTGGACATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000176072.9
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
ENSMUST00000177053.8
ENSMUST00000239400.2
CDS CAA 90 bp TCTGTGAGGCGAGGGTTTTCCTTCTCTAGGGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTTCGAAGCCTTTTGATCTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: SVRRGFSFSRVSIRC*SSRFSVRSLLISIC
Trigger: GCAGATCGAGATCAAAAGGCTTCGAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGACCCTAGAGAAGGAAAACCCTCGCCTCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
CDS GCA 72 bp CTGCCGAATGGTACTCTGTGCTTTCTGAAGGTCCTCTaGAGTCGAGCTACACTGTTGTCTCACTACTGCCAA +
Preference number: 6 (lower is better)
Translates to: LPNGTLCFLKVL*SRATLLSHYCQ
Trigger: TTGGCAGTAGTGAGACAACAGTGTAGCTCGACTGCAGAGGACCTTCAGAAAGCACAGAGTACCATTCGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000176149.9
ENSMUST00000176764.9
ENSMUST00000176825.3
CDS CAA 72 bp CGAGGGTTTTCCTTCTCTAGGGTCTCAATCCGCTGTTaGAGCAGCCGGTTCTCTGTTCGAAGCCTTTTGATC +
Preference number: 6 (lower is better)
Translates to: RGFSFSRVSIRC*SSRFSVRSLLI
Trigger: GATCAAAAGGCTTCGAACAGAGAACCGGCTGCTCAAACAGCGGATTGAGACCCTAGAGAAGGAAAACCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176072.9
CDS CAA 72 bp AAAGTCCTCTGTGAGGCGAGGGTTTTCCTGCTGTTCTaGCAACTGCCGAATGGTACTCTGTGCTTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: KVLCEARVFLLF*QLPNGTLCFLK
Trigger: CTTCAGAAAGCACAGAGTACCATTCGGCAGTTGCAAGAACAGCAGGAAAACCCTCGCCTCACAGAGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000176149.9
ENSMUST00000176825.3