Pregenerated sensors for EVI5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011831Ensembl transcript IDs: ENSMUST00000112642.8, ENSMUST00000124034.8, ENSMUST00000128723.8, ENSMUST00000138111.8, ENSMUST00000155955.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGAGGCATCCAGTCAGCAGCAGCCTGCCGCCTCTCCACAGGTTaGGTGTCCTTTCTCAATTCACAACTAACAGGCACTCGGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: CGGIQSAAACRLSTG*VSFLNSQLTGTRLS Trigger: AGAAAGCCGAGTGCCTGTTAGTTGTGAATTGAGAAAGGACACTCAACCTGTGGAGAGGCGGCAGGCTGCTGCTGACTGGATGCCTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 90 bp | GTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAAATaGCCAGTTAGCTGGACTATGATGTTTCCATCAACCAGCAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: VLRAGKGFFSCSQHK*PVSWTMMFPSTSKG Trigger: GCCTTTGCTGGTTGATGGAAACATCATAGTCCAGCTAACTGGCCATTTATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 90 bp | CTTGTAACTTTGCATGTCCAATGGATTACCATGTCAGCTCTTCTCTaGAGGGAAGGGGTATGTAGACCCACAGATGTAAAAGTTGGATGT | + |
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Preference number: 1 (lower is better) Translates to: LVTLHVQWITMSALL*REGVCRPTDVKVGC Trigger: ACATCCAACTTTTACATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTGGACATGCAAAGTTACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 90 bp | TTTAGAAATTATACAAAGAAAAGGTGTTTGTGTGACAGTCTCCAATaGCCACTAACAGAACTGAATTTTAGTGAAGAAACAGACATGCCA | + |
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Preference number: 1 (lower is better) Translates to: FRNYTKKRCLCDSLQ*PLTELNFSEETDMP Trigger: TGGCATGTCTGTTTCTTCACTAAAATTCAGTTCTGTTAGTGGCCATTGGAGACTGTCACACAAACACCTTTTCTTTGTATAATTTCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGAAGGGACTCGACCCTaGCAGTGCTGTCACTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QWITMSALLWREGVCRPTEGTRP*QCCHSQ Trigger: CTGAGAGTGACAGCACTGCCAGGGTCGAGTCCCTTC...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGTCAGACTCTGGGTGTaGCACAGCAGTAGAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: QWITMSALLWREGVCRPTVRLWV*HSSREL Trigger: AAGCTCTCTACTGCTGTGCCACACCCAGAGTCTGAC...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATACGCCTCTCCACAGGTTaGGTGTCCTTTCTCAATTCA | + |
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Preference number: 2 (lower is better) Translates to: QAALCSGLEKAFSLVLNIRLSTG*VSFLNS Trigger: TGAATTGAGAAAGGACACTCAACCTGTGGAGAGGCG...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATGTGAAGAAACAGACATaGCAAGCACAGGATAAATCA | + |
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Preference number: 2 (lower is better) Translates to: WITMSALLWREGVCRPTDVKKQT*QAQDKS Trigger: TGATTTATCCTGTGCTTGGCATGTCTGTTTCTTCAC...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATACAAGAATTTAGCGGGTaGTCTGGACACAGAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QAALCSGLEKAFSLVLNIQEFSG*SGHRRH Trigger: ATGCCTTCTGTGTCCAGAGCACCCGCTAAATTCTTG...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTGTACAGGACAAGGGATaGCTCCAGCTCTTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QPTMQHKASHSHRMKTTFVQDKG*LQLFSC Trigger: ACAGGAGAAGAGCTGGAGCCATCCCTTGTCCTGTAC...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATAATTCAGTGAGCATTTaGCAAAGACAGTCAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: WITMSALLWREGVCRPTDNSVSI*QRQSGK Trigger: CTTACCTGACTGTCTTTGCCAAATGCTCACTGAATT...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATAGTCTACTGTGGCAATaGAAATTCAGTGAGCATTTG | + |
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Preference number: 2 (lower is better) Translates to: WITMSALLWREGVCRPTDSLLWQ*KFSEHL Trigger: CAAATGCTCACTGAATTTCCATTGCCACAGTAGACT...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATACAGTTAGCTGGACTATaGTGTTTCCATCAACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QAALCSGLEKAFSLVLNIQLAGL*CFHQPA Trigger: TGCTGGTTGATGGAAACATCATAGTCCAGCTAACTG...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTTTACACAAGTTCTGTTaGAATGCTGAAGGCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPLHKFC*NAEGSP Trigger: AGGACTGCCTTCAGCATTCCAACAGAACTTGTGTAA...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACATCATGTTTCCTAATGTaGAATCGAGATAAAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: QWITMSALLWREGVCRPTSCFLM*NRDKEQ Trigger: CTGTTCTTTATCTCGATTCCACATTAGGAAACATGA...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTTTGTTTGTCTTTTGGTaGTTCTGGGATTGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPLFVFW*FWDWTQ Trigger: CTGTGTCCAATCCCAGAACCACCAAAAGACAAACAA...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTACACAAGGAAACAACTaGGTAAAGGGTTTTTATGGC | + |
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Preference number: 2 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPTQGNN*VKGFYG Trigger: GCCATAAAAACCCTTTACTCAGTTGTTTCCTTGTGT...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATATCTTTGTTTGTCTTTTaGTGGTTCTGGGATTGGACA | + |
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Preference number: 2 (lower is better) Translates to: QAALCSGLEKAFSLVLNISLFVF*WFWDWT Trigger: TGTCCAATCCCAGAACCACCAAAAGACAAACAAAGA...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATATACAGGCAGCTGACTTaGAAACTAATAAACACAAAT | + |
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Preference number: 2 (lower is better) Translates to: QAALCSGLEKAFSLVLNIYRQLT*KLINTN Trigger: ATTTGTGTTTATTAGTTTCCAAGTCAGCTGCCTGTA...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CAA 90 bp | ATAAATCACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTaGGAAACTAATAAACACAAATGTACAGTTTGTTCAATGAGCATA | + |
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Preference number: 2 (lower is better) Translates to: INHISVLVTRLQAAD*ETNKHKCTVCSMSI Trigger: TATGCTCATTGAACAAACTGTACATTTGTGTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGTGATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTGCAAGAAGTAGCATGTaGTATAACCTCTTTAATCGT | + |
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Preference number: 2 (lower is better) Translates to: QPTMQHKASHSHRMKTTFARSSM*YNLFNR Trigger: ACGATTAAAGAGGTTATAGCACATGCTACTTCTTGC...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CAA 90 bp | ACCAAGGTTATTTTACACCTATTTCAAACCAGAAAGAGTATTAGGTaGTTCTCTGTCTTTGTTTGTCTTTTGGTGGTTCTGGGATTGGAC | + |
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Preference number: 2 (lower is better) Translates to: TKVILHLFQTRKSIR*FSVFVCLLVVLGLD Trigger: GTCCAATCCCAGAACCACCAAAAGACAAACAAAGACAGAGAACAACCTAATACTCTTTCTGGTTTGAAATAGGTGTAAAATAACCTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR TCA 72 bp | ATCCAGTCAGCAGCAGCCTGCCGCCTCTCCACAGGTTaGGTGTCCTTTCTCAATTCACAACTAACAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: IQSAAACRLSTG*VSFLNSQLTGT Trigger: AGTGCCTGTTAGTTGTGAATTGAGAAAGGACACTCAACCTGTGGAGAGGCGGCAGGCTGCTGCTGACTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | CATTTCCAATCTTGTCTGTCAAGCAAGAGAGTAGCTTaGGCACAGTCTCCCTGGGACAGCCCAGCCCACAAT | + |
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Preference number: 3 (lower is better) Translates to: HFQSCLSSKRVA*AQSPWDSPAHN Trigger: ATTGTGGGCTGGGCTGTCCCAGGGAGACTGTGCCCAAGCTACTCTCTTGCTTGACAGACAAGATTGGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CAA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATCCGCCTCTCCACAGGTaGAGTGTCCTTTCTCAATTC | + |
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Preference number: 3 (lower is better) Translates to: WITMSALLWREGVCRPTDPPLHR*SVLSQF Trigger: GAATTGAGAAAGGACACTCAACCTGTGGAGAGGCGG...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR TCA 72 bp | CAAGTCATCTCACTTTGCTGGGCTACGACAACCTCCTaGACTAAGAGTACAGAGCCACACAGGAGAACCCGA | + |
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Preference number: 3 (lower is better) Translates to: QVISLCWATTTS*TKSTEPHRRTR Trigger: TCGGGTTCTCCTGTGTGGCTCTGTACTCTTAGTTCAGGAGGTTGTCGTAGCCCAGCAAAGTGAGATGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR TCA 72 bp | GACCCACTCTCACTGAGAGACTTGACTCCATGCTCGTaGATTTCCATCTCTACAGAAGAGTCTCTGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: DPLSLRDLTPCS*ISISTEESLQT Trigger: TGTCTGCAGAGACTCTTCTGTAGAGATGGAAATTCACGAGCATGGAGTCAAGTCTCTCAGTGAGAGTGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CAA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGTTCTCTGTCTTTGTTaGTCTTTTGGTGGTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QWITMSALLWREGVCRPTVLCLC*SFGGSG Trigger: CCCAGAACCACCAAAAGACAAACAAAGACAGAGAAC...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CAA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAACAAAGAAAAGGTGTTaGTGTGACAGTCTCCAATGG | + |
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Preference number: 3 (lower is better) Translates to: QWITMSALLWREGVCRPTTKKRC*CDSLQW Trigger: CCATTGGAGACTGTCACACAAACACCTTTTCTTTGT...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CAA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGGTTGTTCTCTGTCTTaGTTTGTCTTTTGGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: QWITMSALLWREGVCRPTGCSLS*FVFWWF Trigger: GAACCACCAAAAGACAAACAAAGACAGAGAACAACC...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR GCA 72 bp | TCAAAGGCACTGCCTGGAAATTCACAAGCTGCATTGTaGTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SKALPGNSQAAL*SGLEKAFSLVL Trigger: GAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTGTGAATTTCCAGGCAGTGCCTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CAA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACACTACAGGCAGCTGACTaGGAAACTAATAAACACAAA | + |
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Preference number: 3 (lower is better) Translates to: QWITMSALLWREGVCRPTLQAAD*ETNKHK Trigger: TTTGTGTTTATTAGTTTCCAAGTCAGCTGCCTGTAG...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR TCA 72 bp | CTTGTTCTCAACATAAATGGCCAGTTAGCTGGACTATaGTGTTTCCATCAACCAGCAAAGGCTGACTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LVLNINGQLAGL*CFHQPAKADWL Trigger: CAGCCAGTCAGCCTTTGCTGGTTGATGGAAACATCATAGTCCAGCTAACTGGCCATTTATGTTGAGAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | AGAGTATTAGGTTGTTCTCTGTCTTTGTTTGTCTTTTaGTGGTTCTGGGATTGGACACAGGGCCATGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: RVLGCSLSLFVF*WFWDWTQGHGH Trigger: ATGCCCATGGCCCTGTGTCCAATCCCAGAACCACCAAAAGACAAACAAAGACAGAGAACAACCTAATACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | TTGCATGTCCAATGGATTACCATGTCAGCTCTTCTCTaGAGGGAAGGGGTATGTAGACCCACAGATGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: LHVQWITMSALL*REGVCRPTDVK Trigger: TTTTACATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTGGACATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR-3UTR CAA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTGTCTTTGTTTGTCTTTaGGTGGTTCTGGGATTGGAC | + |
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Preference number: 3 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPVFVCL*VVLGLD Trigger: GTCCAATCCCAGAACCACCAAAAGACAAACAAAGAC...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | TTATGCATTGATTTTAAAGAAGTCAGACTCTGGGTGTaGCACAGCAGTAGAGAGCTTACCCACTGTGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: LCIDFKEVRLWV*HSSRELTHCVR Trigger: CCTTACACAGTGGGTAAGCTCTCTACTGCTGTGCCACACCCAGAGTCTGACTTCTTTAAAATCAATGCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR GCA 72 bp | TCAAAAGCAGTAGACATTATTTTCAATCAAAGGCACTaGCTGGAAATTCACAAGCTGCATTGTGCTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: SKAVDIIFNQRH*LEIHKLHCAQG Trigger: GCCCTGAGCACAATGCAGCTTGTGAATTTCCAGGCAGTGCCTTTGATTGAAAATAATGTCTACTGCTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | AGTTACGGATTCTACAAATGTTGGCCATCGATGTCTTaGTATTGTGCAATATCCATGCTGGCCATGAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SYGFYKCWPSMS*YCAISMLAMKS Trigger: GCTTTTCATGGCCAGCATGGATATTGCACAATACCAAGACATCGATGGCCAACATTTGTAGAATCCGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | TCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTaGAAACTAATAAACACAAATGTACAGTTTGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: SLCWSHVYRQLT*KLINTNVQFVQ Trigger: TTGAACAAACTGTACATTTGTGTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | GCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAAATaGCCAGTTAGCTGGACTATGATGTTTCCATCAACC | + |
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Preference number: 3 (lower is better) Translates to: AGKGFFSCSQHK*PVSWTMMFPST Trigger: GGTTGATGGAAACATCATAGTCCAGCTAACTGGCCATTTATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | ATTTACCAATTAGCATACTTCAGTCTACTGTGGCAATaGAAATTCAGTGAGCATTTGGCAAAGACAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: IYQLAYFSLLWQ*KFSEHLAKTVR Trigger: CCTGACTGTCTTTGCCAAATGCTCACTGAATTTCCATTGCCACAGTAGACTGAAGTATGCTAATTGGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CCA 72 bp | AACCCCATTTACCAATTAGCATACTTCAGTCTACTGTaGCAATGGAAATTCAGTGAGCATTTGGCAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: NPIYQLAYFSLL*QWKFSEHLAKT Trigger: TGTCTTTGCCAAATGCTCACTGAATTTCCATTGCCACAGTAGACTGAAGTATGCTAATTGGTAAATGGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR TCA 72 bp | CGATGTCTTGGTATTGTGCAATATCCATGCTGGCCATaGAAAGCTTACCAAAACATAATTGATATCCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: RCLGIVQYPCWP*KAYQNIIDILN Trigger: GTTAAGGATATCAATTATGTTTTGGTAAGCTTTTCATGGCCAGCATGGATATTGCACAATACCAAGACATCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS-3UTR CCA 90 bp | TACAGGACAAGGGATGGCTCCAGCTCTTCTCCTGTAACACTGCTGCCCTCAAGATGGGGGCTGCTTCTGTaGAGCCTCAGGGTCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: YRTRDGSSSSPVTLLPSRWGLLL*SLRVTL Trigger: GAGAGTGACCCTGAGGCTCCACAGAAGCAGCCCCCA...TCTTGAGGGCAGCAGTGTTACAGGAGAAGAGCTGGAGCCATCCCTTGTCCTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS-3UTR GCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATTCTCTCTGTGGGGGCTaGTTCTGTGGAGCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDSLCGG*FCGASG Trigger: CCCTGAGGCTCCACAGAAGCAGCCCCCACAGAGAGA...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CAA 72 bp | CATCCAGTCAGCAGCAGCCTGCCGCCTCTCCACAGGTaGAGTGTCCTTTCTCAATTCACAACTAACAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: HPVSSSLPPLHR*SVLSQFTTNRH Trigger: GTGCCTGTTAGTTGTGAATTGAGAAAGGACACTCAACCTGTGGAGAGGCGGCAGGCTGCTGCTGACTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| 3UTR CAA 72 bp | GCATTTCCAATCTTGTCTGTCAAGCAAGAGAGTAGCTaGGGCACAGTCTCCCTGGGACAGCCCAGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: AFPILSVKQESS*GTVSLGQPSPQ Trigger: TTGTGGGCTGGGCTGTCCCAGGGAGACTGTGCCCAAGCTACTCTCTTGCTTGACAGACAAGATTGGAAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGACAAGGGATGGCTCCAGCTCTTCTCCTGTAACACTGCTGCCCTCAAGATCAGCTTCACAGCGATaGGTTCCTCCTGAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRTRDGSSSSPVTLLPSRSASQR*VPPEAL Trigger: CAAGGCTTCAGGAGGAACTCATCGCTGTGAAGCTGA...TCTTGAGGGCAGCAGTGTTACAGGAGAAGAGCTGGAGCCATCCCTTGTCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACATCAGGGTCACTCTCCTaGGGTCCCAGCATACCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QWITMSALLWREGVCRPTSGSLS*GPSIPS Trigger: AGACGGTATGCTGGGACCTCAGGAGAGTGACCCTGA...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGACAAGGGATGGCTCCAGCTCTTCTCCTGTAACACTGCTGCCCTCAAGACTGCTTCGCTCTCACTaGCATCTGCCAAAGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YRTRDGSSSSPVTLLPSRLLRSH*HLPKQD Trigger: ATCCTGCTTTGGCAGATGGCAGTGAGAGCGAAGCAG...TCTTGAGGGCAGCAGTGTTACAGGAGAAGAGCTGGAGCCATCCCTTGTCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACACAAAAGGAGGTCGGCTaGAGAAGTCCCGCTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QWITMSALLWREGVCRPTQKEVG*RSPAGL Trigger: AAGGCCAGCGGGACTTCTCCAGCCGACCTCCTTTTG...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGACAAGGGATGGCTCCAGCTCTTCTCCTGTAACACTGCTGCCCTCAAGAGACTGGCCATCTGACTaGCTGTATGCGATACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRTRDGSSSSPVTLLPSRDWPSD*LYAILC Trigger: ACACAGTATCGCATACAGTCAGTCAGATGGCCAGTC...TCTTGAGGGCAGCAGTGTTACAGGAGAAGAGCTGGAGCCATCCCTTGTCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATATCAGCAATGTGCTGCTaGAGCTCAGCCACGGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNISAMCC*SSATAA Trigger: CGCGGCCGTGGCTGAGCTGCAGCAGCACATTGCTGA...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACATCCTTCAGTGCACACTaGGACTCGGCTTCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QWITMSALLWREGVCRPTSFSAH*DSASLS Trigger: ACTGAGTGAAGCCGAGTCTCAGTGTGCACTGAAGGA...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATCTGCATCTCCTTCAGTaGACACTGAGACTCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDLHLLQ*TLRLGF Trigger: GAAGCCGAGTCTCAGTGTGCACTGAAGGAGATGCAG...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAGGAGCCGCACAGCCATaGCTTCCTCCTTGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNIGAAQP*LPPCSC Trigger: GCAAGAACAAGGAGGAAGTCATGGCTGTGCGGCTCC...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATAGACTGTTCACCTCTTaGTCCGCTCTTCGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDRLFTS*SALRSW Trigger: CCAACTTCGAAGAGCGGAGCAAGAGGTGAACAGTCT...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACTCAAGCTCAGCAATGTaGTGCTGCAGCTCAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TSLCWSHVYRQLTWKLINSSSAM*CCSSAT Trigger: CGTGGCTGAGCTGCAGCAGCACATTGCTGAGCTTGA...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACCTGGAGAAGTCCCGCTaGCCTTTTAGGCATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLCWSHVYRQLTWKLINLEKSR*PFRHLS Trigger: GCTCAGATGCCTAAAAGGCCAGCGGGACTTCTCCAG...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGACAAGGGATGGCTCCAGCTCTTCTCCTGTAACACTGCTGCCCTCAAGACAAACTGATGTGGAATaGCCTTCTGAAAGTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YRTRDGSSSSPVTLLPSRQTDVE*PSESAV Trigger: TACAGCACTTTCAGAAGGTCATTCCACATCAGTTTG...TCTTGAGGGCAGCAGTGTTACAGGAGAAGAGCTGGAGCCATCCCTTGTCCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGACAAGGGATGGCTCCAGCTCTTCTCCTGTAACACTGCTGCCCTCAAGAAAAAGCCTCTTCTTCTaGCATCTGCATCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: YRTRDGSSSSPVTLLPSRKSLFF*HLHQQQ Trigger: TTGTTGCTGATGCAGATGCCAGAAGAAGAGGCTTTT...TCTTGAGGGCAGCAGTGTTACAGGAGAAGAGCTGGAGCCATCCCTTGTCCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGGTAGGACTCTCTCTGTaGGGGCTGCTTCTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKVGLSL*GLLLWS Trigger: GCTCCACAGAAGCAGCCCCCACAGAGAGAGTCCTAC...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATTGTGTTCTTCACCCATaGGAGAGTAGAACTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDCVLHP*ESRTQL Trigger: AAGCTGAGTTCTACTCTCTCATGGGTGAAGAACACA...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACGCCACACTATTGCTCTaGAGTGATGGGGTATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSLCWSHVYRQLTWKLINATLLL*SDGVSL Trigger: AAGGGATACCCCATCACTTCAGAGCAATAGTGTGGC...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACTCACTCAGTCTGGCTTaGACCAATTCCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLCWSHVYRQLTWKLINSLSLA*TNSFSS Trigger: GCTGGAGAAGGAATTGGTTCAAGCCAGACTGAGTGA...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAGAGCACACCTTCTCCTaGAGACTGTTCACCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNIEHTFS*RLFTSC Trigger: GCAAGAGGTGAACAGTCTGCAGGAGAAGGTGTGCTC...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATGGGCCAGATTTTCTGTaGAAAGGAAAACCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDGPDFL*KGKPMA Trigger: TGCCATTGGTTTTCCTTTGCACAGAAAATCTGGCCC...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACGCTCTCACTGCCATCTaGCAAAGCAGGATTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLCWSHVYRQLTWKLINALTAI*QSRIQR Trigger: TCTCTGAATCCTGCTTTGGCAGATGGCAGTGAGAGC...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACACTCCTATTAGATGGCTaGCAATGTGGATTCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QWITMSALLWREGVCRPTLLLDG*QCGFHQ Trigger: TTGATGGAATCCACATTGTCAGCCATCTAATAGGAG...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAAGAACTCAGCTTTTCTaGCACCTTGTCTGTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNIRTQLF*HLVCRH Trigger: GTGGCGACAGACAAGGTGGCAGAAAAGCTGAGTTCT...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATTCCGCTCTTCGAAGTTaGTTACTATTGATCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDSALRS*LLLIWF Trigger: GAACCAGATCAATAGTAACCAACTTCGAAGAGCGGA...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATACAAGCTCCTTCACTTaGTTTTCTTTCTTCTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDTSSFT*FSFFLR Trigger: ACGCAAGAAGAAAGAAAAGCAAGTGAAGGAGCTTGT...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTCAATCTCTGCCTGTCTaGGCTTTGCCTCACTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPQSLPV*ALPHLT Trigger: AGTTAAGTGAGGCAAAGCGCAGACAGGCAGAGATTG...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATACTCATGAGTCAGCTCTaGTATCTGGTCCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNILMSQL*YLVLQF Trigger: GAACTGAAGGACCAGATAGCAGAGCTGACTCATGAG...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTCGGCTTCACTCAGTCTaGCTTGAACCAATTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPRLHSV*LEPIPS Trigger: AGAAGGAATTGGTTCAAGCCAGACTGAGTGAAGCCG...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACATGGTTACTATTGATCTaGTTCTGTGTCTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QWITMSALLWREGVCRPTWLLLI*FCVSIS Trigger: GGAAATGGAGACACAGAACCAGATCAATAGTAACCA...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATACTGTTAAGCTGTCCTTaGAGCTTGCCCTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNILLSCP*SLPSSF Trigger: GAAAGAAGAGGGCAAGCTCCAAGGACAGCTTAACAG...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| 3UTR CAA 72 bp | AAGAGTATTAGGTTGTTCTCTGTCTTTGTTTGTCTTTaGGTGGTTCTGGGATTGGACACAGGGCCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSIRLFSVFVCL*VVLGLDTGPWA Trigger: TGCCCATGGCCCTGTGTCCAATCCCAGAACCACCAAAAGACAAACAAAGACAGAGAACAACCTAATACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAACTATTGCTCTGAAGTaGTGGGGTATCCCTTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNITIALK*WGIPLR Trigger: TCGTAAAGGGATACCCCATCACTTCAGAGCAATAGT...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | TGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACAGATCATTTTCAGGAGTTCTaGATACTGGTCCTTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WITMSALLWREGVCRPTDHFQEF*ILVLNC Trigger: ACAATTAAGGACCAGTATTCAGAACTCCTGAAAATG...ATCTGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTGCAACAATCCAACGATaGAAGCACTGCCCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPTMQHKASHSHRMKTTFATIQR*KHCPDS Trigger: ACTGTCAGGGCAGTGCTTTCATCGTTGGATTGTTGC...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTCATCTCTCTTATTTCTaGCTGTGTTTCCGCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPHLSYF*LCFRLS Trigger: AGAGAGGCGGAAACACAGGCAGAAATAAGAGAGATG...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTCTTGCATTCAATCTCTaGCTGTCTGCGCTTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPTMQHKASHSHRMKTTFLAFNL*LSALCL Trigger: GAGGCAAAGCGCAGACAGGCAGAGATTGAATGCAAG...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATACTTCCTCCTTGTTCTTaGATTCAATCTCTGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNILPPCS*IQSLPV Trigger: GACAGGCAGAGATTGAATGCAAGAACAAGGAGGAAG...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACGCAAAGGAAAACCAATaGCACTTTCCTGTAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSLCWSHVYRQLTWKLINAKENQ*HFPVRN Trigger: GTTCCTTACAGGAAAGTGCCATTGGTTTTCCTTTGC...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACCAGTTTTTCACAAGGTaGAGTCATTTTCAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSLCWSHVYRQLTWKLINQFFTR*SHFQEF Trigger: GAACTCCTGAAAATGACTTCACCTTGTGAAAAACTG...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGATTACCATGTCAGCTCTTCTCTGGAGGGAAGGGGTATGTAGACCCACACGTTGTAGGTGGAACTaGATTTATGTTTTTCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: QWITMSALLWREGVCRPTRCRWN*IYVFLM Trigger: CATTAGAAAAACATAAATGCAGTTCCACCTACAACG...TGTGGGTCTACATACCCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTGCTGTCCTTGGAGCTTaGCCTCTTCTTTCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QPTMQHKASHSHRMKTTFAVLGA*PLLSGF Trigger: AAATCCAGAAAGAAGAGGGCAAGCTCCAAGGACAGC...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAAGCATTTTTCTTGGGTaGGTCTTTCCATCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNISIFLG*VFPSSR Trigger: TCTGGAAGATGGAAAGACCCACCCAAGAAAAATGCT...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATATTGCCCTCTTCTTTCTaGATTTCAAGCTCAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QAALCSGLEKAFSLVLNILPSSF*ISSSAM Trigger: CATTGCTGAGCTTGAAATCCAGAAAGAAGAGGGCAA...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTGCGATGAGTTCCTCCTaGAGCCTTGCAATATTATTC | + |
|
Preference number: 4 (lower is better) Translates to: QPTMQHKASHSHRMKTTFAMSSS*SLAILF Trigger: GAATAATATTGCAAGGCTTCAGGAGGAACTCATCGC...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGGAAGTTGGTTACTATTaGTCTGGTTCTGTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKEVGYY*SGSVSP Trigger: TGGAGACACAGAACCAGATCAATAGTAACCAACTTC...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTAATTCCTTCTCCAGCTaGAGCACGAAATCTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPTMQHKASHSHRMKTTFNSFSS*STKSSL Trigger: CAACGAAGATTTCGTGCTGCAGCTGGAGAAGGAATT...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTTTCCTCCTGAAGCCTTaGAATATTATTCTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPFLLKP*NIILIR Trigger: CCTGATGAGAATAATATTGCAAGGCTTCAGGAGGAA...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGAGATGGCTGACAATGTaGATTCCATCAAAAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKRWLTM*IPSKGG Trigger: ACCTCCTTTTGATGGAATCCACATTGTCAGCCATCT...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTTCTAAGGTTCTGACTTaGTGTCGAAGTTCTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPSKVLT*CRSSFK Trigger: TTTGAAAGAACTTCGACAGCAAGTCAGAACCTTAGA...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGTTTTTGAGTTGTATTTaGCTTGGTAAGCTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKFLSCI*LGKLTG Trigger: TCCAGTCAGCTTACCAAGTCAAATACAACTCAAAAA...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGGCATTACATAAAAGTTaGCACACTATTGCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKALHKS*HTIALK Trigger: CTTCAGAGCAATAGTGTGGCAACTTTTATGTAATGC...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CTATCCCAAGACAGCAAAGTTTTCTGTCCTCTGTCATCCACTCATTTTCTGCCTATCATACATTCAAACTaGTACATACAAAGGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSQDSKVFCPLSSTHFLPIIHSN*YIQRPN Trigger: ATTGGGCCTTTGTATGTACCAGTTTGAATGTATGAT...AGGCAGAAAATGAGTGGATGACAGAGGACAGAAAACTTTGCTGTCTTGGGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| 3UTR CAA 72 bp | TTCAAACCAGAAAGAGTATTAGGTTGTTCTCTGTCTTaGTTTGTCTTTTGGTGGTTCTGGGATTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FKPERVLGCSLS*FVFWWFWDWTQ Trigger: CTGTGTCCAATCCCAGAACCACCAAAAGACAAACAAAGACAGAGAACAACCTAATACTCTTTCTGGTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTAGGAGTTCTGAATACTaGTCCTTAATTGTCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: QPTMQHKASHSHRMKTTFRSSEY*SLIVIL Trigger: GAGTATGACAATTAAGGACCAGTATTCAGAACTCCT...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| 3UTR CAA 72 bp | TACTTTGTGTTTAGAAATTATACAAAGAAAAGGTGTTaGTGTGACAGTCTCCAATGGCCACTAACAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YFVFRNYTKKRC*CDSLQWPLTEL Trigger: CAGTTCTGTTAGTGGCCATTGGAGACTGTCACACAAACACCTTTTCTTTGTATAATTTCTAAACACAAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| 3UTR CAA 72 bp | ATTTTACACCTATTTCAAACCAGAAAGAGTATTAGGTaGTTCTCTGTCTTTGTTTGTCTTTTGGTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILHLFQTRKSIR*FSVFVCLLVVL Trigger: CAGAACCACCAAAAGACAAACAAAGACAGAGAACAACCTAATACTCTTTCTGGTTTGAAATAGGTGTAAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS GCA 90 bp | TGCCAGTGGCGGTGGTGCCGGAGCTCCCTGATGGTGCTTTCAGCCTaGTCCAGCTTAGCCCTGGCCGCATCAGTCTGTTGTTTGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CQWRWCRSSLMVLSA*SSLALAASVCCLMV Trigger: CACCATCAAACAACAGACTGATGCGGCCAGGGCTAAGCTGGAGCAGGCTGAAAGCACCATCAGGGAGCTCCGGCACCACCGCCACTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128723.8 |
||
| CDS TCA 90 bp | TCTCTCTGTGGGGGCTGCTTCTGTGGAGCCTCAGGGTCACTCTCCTaGGGTCCCAGCATACCGTCTTCTGCTTCGCTCTCACTGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLCGGCFCGASGSLS*GPSIPSSASLSLPS Trigger: AGATGGCAGTGAGAGCGAAGCAGAAGACGGTATGCTGGGACCTCAGGAGAGTGACCCTGAGGCTCCACAGAAGCAGCCCCCACAGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS GCA 90 bp | TGGAGCCTCAGGGTCACTCTCCTGAGGTCCCAGCATACCGTCTTCTaGTTCGCTCTCACTGCCATCTGCCAAAGCAGGATTCAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: WSLRVTLLRSQHTVF*FALTAICQSRIQRH Trigger: ATGTCTCTGAATCCTGCTTTGGCAGATGGCAGTGAGAGCGAAGCAGAAGACGGTATGCTGGGACCTCAGGAGAGTGACCCTGAGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS GCA 90 bp | CACTCTCCTGAGGTCCCAGCATACCGTCTTCTGCTTCGCTCTCACTaGCATCTGCCAAAGCAGGATTCAGAGACATTGGGCCAGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSPEVPAYRLLLRSH*HLPKQDSETLGQIF Trigger: GAAAATCTGGCCCAATGTCTCTGAATCCTGCTTTGGCAGATGGCAGTGAGAGCGAAGCAGAAGACGGTATGCTGGGACCTCAGGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS GCA 90 bp | GCAAGCAAGCCCTTGTTCTTCACAGACAGCGAGCACACCTTCTCCTaGAGACTGTTCACCTCTTGCTCCGCTCTTCGAAGTTGGTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: ASKPLFFTDSEHTFS*RLFTSCSALRSWLL Trigger: TAGTAACCAACTTCGAAGAGCGGAGCAAGAGGTGAACAGTCTGCAGGAGAAGGTGTGCTCGCTGTCTGTGAAGAACAAGGGCTTGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
||
| CDS CCA 90 bp | CCTGCATCTCCTTCAGTGCACACTGAGACTCGGCTTCACTCAGTCTaGCTTGAACCAATTCCTTCTCCAGCTGCAGCACGAAATCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PASPSVHTETRLHSV*LEPIPSPAAARNLR Trigger: ACGAAGATTTCGTGCTGCAGCTGGAGAAGGAATTGGTTCAAGCCAGACTGAGTGAAGCCGAGTCTCAGTGTGCACTGAAGGAGATGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
||
| CDS CCA 90 bp | TTCTTGCATTCAATCTCTGCCTGTCTGCGCTTTGCCTCACTTAACTaGGCAAGCAAGCCCTTGTTCTTCACAGACAGCGAGCACACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLHSISACLRFASLN*ASKPLFFTDSEHTF Trigger: GAAGGTGTGCTCGCTGTCTGTGAAGAACAAGGGCTTGCTTGCCCAGTTAAGTGAGGCAAAGCGCAGACAGGCAGAGATTGAATGCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
||
| CDS TCA 90 bp | ACTGGCCATCTGACTGACTGTATGCGATACTGTGTTCTTCACCCATaGGAGAGTAGAACTCAGCTTTTCTGCCACCTTGTCTGTCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGHLTDCMRYCVLHP*ESRTQLFCHLVCRH Trigger: GTGGCGACAGACAAGGTGGCAGAAAAGCTGAGTTCTACTCTCTCATGGGTGAAGAACACAGTATCGCATACAGTCAGTCAGATGGCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000155955.2 |
||
| CDS GCA 90 bp | TTCACAGACAGCGAGCACACCTTCTCCTGCAGACTGTTCACCTCTTaGTCCGCTCTTCGAAGTTGGTTACTATTGATCTGGTTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FTDSEHTFSCRLFTS*SALRSWLLLIWFCV Trigger: GACACAGAACCAGATCAATAGTAACCAACTTCGAAGAGCGGAGCAAGAGGTGAACAGTCTGCAGGAGAAGGTGTGCTCGCTGTCTGTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
||
| CDS CCA 90 bp | GATGAGTGGAACAATTCATCGTCTCCTATTAGATGGCTGACAATGTaGATTCCATCAAAAGGAGGTCGGCTGGAGAAGTCCCGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DEWNNSSSPIRWLTM*IPSKGGRLEKSRWP Trigger: AGGCCAGCGGGACTTCTCCAGCCGACCTCCTTTTGATGGAATCCACATTGTCAGCCATCTAATAGGAGACGATGAATTGTTCCACTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS TCA 90 bp | AAAAAGCCTCTTCTTCTGGCATCTGCATCAGCAACAATCCAACGATaGAAGCACTGCCCTGACAGTAACCAACCTCACGGTCCACTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KKPLLLASASATIQR*KHCPDSNQPHGPLR Trigger: CCTTAGTGGACCGTGAGGTTGGTTACTGTCAGGGCAGTGCTTTCATCGTTGGATTGTTGCTGATGCAGATGCCAGAAGAAGAGGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 |
||
| CDS CCA 90 bp | TGCTTCGCTCTCACTGCCATCTGCCAAAGCAGGATTCAGAGACATTaGGCCAGATTTTCTGTGCAAAGGAAAACCAATGGCACTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFALTAICQSRIQRH*ARFSVQRKTNGTFL Trigger: CAGGAAAGTGCCATTGGTTTTCCTTTGCACAGAAAATCTGGCCCAATGTCTCTGAATCCTGCTTTGGCAGATGGCAGTGAGAGCGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS TCA 90 bp | TTTTTCTTGGGTGGGTCTTTCCATCTTCCAGAAGTTCGAGCTAAGTaGCGCTGCCAGTGCTCTTCTAAGGTTCTGACTTGCTGTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLGGSFHLPEVRAK*RCQCSSKVLTCCRS Trigger: ACTTCGACAGCAAGTCAGAACCTTAGAAGAGCACTGGCAGCGTCACTTAGCTCGAACTTCTGGAAGATGGAAAGACCCACCCAAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
||
| CDS TCA 90 bp | CTTCATCCGATGAGTGGAACAATTCATCGTCTCCTATTAGATGGCTaGCAATGTGGATTCCATCAAAAGGAGGTCGGCTGGAGAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LHPMSGTIHRLLLDG*QCGFHQKEVGWRSP Trigger: GGGACTTCTCCAGCCGACCTCCTTTTGATGGAATCCACATTGTCAGCCATCTAATAGGAGACGATGAATTGTTCCACTCATCGGATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGAGCTTTTCTGCCACCTaGTCTGTCGCCACCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKSFSAT*SVATCL Trigger: GAGACAGGTGGCGACAGACAAGGTGGCAGAAAAGCT...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTGTGAGGCAGATGGACTaGCCACCTGACTGGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QPTMQHKASHSHRMKTTFVRQMD*PPDWPS Trigger: AGATGGCCAGTCAGGTGGCAAGTCCATCTGCCTCAC...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS GCA 90 bp | GTTCTTCTTCTCTATATCCAACACTTTATCCTGCATCTCCTTCAGTaGACACTGAGACTCGGCTTCACTCAGTCTGGCTTGAACCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: VLLLYIQHFILHLLQ*TLRLGFTQSGLNQF Trigger: GAATTGGTTCAAGCCAGACTGAGTGAAGCCGAGTCTCAGTGTGCACTGAAGGAGATGCAGGATAAAGTGTTGGATATAGAGAAGAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
||
| CDS-3UTR CAA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACCTCCGCTCTTCGAAGTaGGTTACTATTGATCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSLCWSHVYRQLTWKLINLRSSK*VTIDLV Trigger: AACCAGATCAATAGTAACCAACTTCGAAGAGCGGAG...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGAGCTGTCCTTGGAGCTaGCCCTCTTCTTTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKSCPWS*PSSFWI Trigger: AATCCAGAAAGAAGAGGGCAAGCTCCAAGGACAGCT...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTCGTCTGGACTCAACTTaGATGGGGAAGATGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: QPTMQHKASHSHRMKTTFRLDST*MGKMVT Trigger: AGTCACCATCTTCCCCATCAAAGTTGAGTCCAGACG...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACAACAAGCTCCTTCACTaGCTTTTCTTTCTTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TSLCWSHVYRQLTWKLINNKLLH*LFFLLA Trigger: CGCAAGAAGAAAGAAAAGCAAGTGAAGGAGCTTGTT...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGCAGGATTCAGAGACATaGGGCCAGATTTTCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKQDSET*GQIFCA Trigger: TGCACAGAAAATCTGGCCCAATGTCTCTGAATCCTG...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACAACCACTGTTTCTTCTaGACCCATTCACTGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSLCWSHVYRQLTWKLINNHCFF*THSLIL Trigger: TAAGATCAGTGAATGGGTCAAGAAGAAACAGTGGTT...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTTGGAGGCTGATGAACTaGATACAAGAGAGGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QPTMQHKASHSHRMKTTFWRLMN*IQERNH Trigger: GTGGTTCCTCTCTTGTATCAAGTTCATCAGCCTCCA...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | ACATCTCTGTGCTGGTCACACGTCTACAGGCAGCTGACTTGGAAACTAATAAACAGGATGATGCATACATaGACGTATGAAAACTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSLCWSHVYRQLTWKLINRMMHT*TYENSE Trigger: CTCAGAGTTTTCATACGTCAATGTATGCATCATCCT...GTTTATTAGTTTCCAAGTCAGCTGCCTGTAGACGTGTGACCAGCACAGAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGCATTGTGCTCAGGGCTGGAAAAGGCTTTTTCTCTTGTTCTCAACATAAGATGTCAAATATCCTaGTCGCAATTGGTAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QAALCSGLEKAFSLVLNIRCQIS*SQLVVG Trigger: TCCCACTACCAATTGCGACAAGGATATTTGACATCT...TATGTTGAGAACAAGAGAAAAAGCCTTTTCCAGCCCTGAGCACAATGCAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGGTTCCTCCTGAAGCCTaGCAATATTATTCTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKVPPEA*QYYSHQ Trigger: CTGATGAGAATAATATTGCAAGGCTTCAGGAGGAAC...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTTGGAATGCTGAAGGCAGTCCTAGTCAATGTTTGCTACTCATGTAAGTTCACAGCATTTTTCTaGGGTGGGTCTTTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSVGMLKAVLVNVCYSCKFTAFF*GGSFHL Trigger: AAGATGGAAAGACCCACCCAAGAAAAATGCTGTGAA...CTTACATGAGTAGCAAACATTGACTAGGACTGCCTTCAGCATTCCAACAGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTACTTCCTCCTTGTTCTaGCATTCAATCTCTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPTMQHKASHSHRMKTTFTSSLF*HSISAC Trigger: ACAGGCAGAGATTGAATGCAAGAACAAGGAGGAAGT...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS CCA 90 bp | TGTACAAAGAGTTCCGGAAGATACTCCTGTATCATACATTCAAACTaGTACATACAAAGGCCCAATTCCGCCATACTTGGCTTAAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: CTKSSGRYSCIIHSN*YIQRPNSAILGLNS Trigger: ACTATTTAAGCCAAGTATGGCGGAATTGGGCCTTTGTATGTACCAGTTTGAATGTATGATACAGGAGTATCTTCCGGAACTCTTTGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 |
||
| CDS CCA 90 bp | GCACTTTCCTGTAAGGAACTATCTATAAAATCTTCATCCGATGAGTaGAACAATTCATCGTCTCCTATTAGATGGCTGACAATGTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ALSCKELSIKSSSDE*NNSSSPIRWLTMWI Trigger: AATCCACATTGTCAGCCATCTAATAGGAGACGATGAATTGTTCCACTCATCGGATGAAGATTTTATAGATAGTTCCTTACAGGAAAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCACAATGCAGCATAAGGCATCACACAGTCATAGAATGAAAACTACTTTTTCATCAGGAAATGAGTaGTTCTTCTTCTCTATATCC | + |
|
Preference number: 5 (lower is better) Translates to: QPTMQHKASHSHRMKTTFSSGNE*FFFSIS Trigger: GGATATAGAGAAGAAGAACAACTCATTTCCTGATGA...AAAAGTAGTTTTCATTCTATGACTGTGTGATGCCTTATGCTGCATTGTGGGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS GCA 72 bp | CGGTGGTGCCGGAGCTCCCTGATGGTGCTTTCAGCCTaGTCCAGCTTAGCCCTGGCCGCATCAGTCTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RWCRSSLMVLSA*SSLALAASVCC Trigger: ACAACAGACTGATGCGGCCAGGGCTAAGCTGGAGCAGGCTGAAAGCACCATCAGGGAGCTCCGGCACCACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128723.8 |
||
| CDS TCA 72 bp | GGGGGCTGCTTCTGTGGAGCCTCAGGGTCACTCTCCTaGGGTCCCAGCATACCGTCTTCTGCTTCGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GGCFCGASGSLS*GPSIPSSASLS Trigger: TGAGAGCGAAGCAGAAGACGGTATGCTGGGACCTCAGGAGAGTGACCCTGAGGCTCCACAGAAGCAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
||
| CDS GCA 72 bp | CCAGCTGCAGCACGAAATCTTCGTTGTAGGTGGAACTaGATTTATGCCAGTGGCGGTGGTGCCGGAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PAAARNLRCRWN*IYASGGGAGAP Trigger: GGGAGCTCCGGCACCACCGCCACTGGCATAAATGCAGTTCCACCTACAACGAAGATTTCGTGCTGCAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128723.8 |
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| CDS TCA 72 bp | CCGCGATGCTATCAGCTTCCCGGAGCCGCACAGCCATaGCTTCCTCCTTGTTCTTGCATTCAATCTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PRCYQLPGAAQP*LPPCSCIQSLP Trigger: AGGCAGAGATTGAATGCAAGAACAAGGAGGAAGTCATGGCTGTGCGGCTCCGGGAAGCTGATAGCATCGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS GCA 72 bp | GAGGTCCCAGCATACCGTCTTCTGCTTCGCTCTCACTaGCATCTGCCAAAGCAGGATTCAGAGACATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: EVPAYRLLLRSH*HLPKQDSETLG Trigger: GCCCAATGTCTCTGAATCCTGCTTTGGCAGATGGCAGTGAGAGCGAAGCAGAAGACGGTATGCTGGGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS CCA 72 bp | CCTTCTCCAGCTGCAGCACGAAATCTTCGTTGTAGGTaGAACTGCATTTATGCCAGTGGCGGTGGTGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PSPAAARNLRCR*NCIYASGGGAG Trigger: TCCGGCACCACCGCCACTGGCATAAATGCAGTTCCACCTACAACGAAGATTTCGTGCTGCAGCTGGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128723.8 |
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| CDS CCA 72 bp | CCTTCAGTGCACACTGAGACTCGGCTTCACTCAGTCTaGCTTGAACCAATTCCTTCTCCAGCTGCAGCACGA | + |
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Preference number: 6 (lower is better) Translates to: PSVHTETRLHSV*LEPIPSPAAAR Trigger: TCGTGCTGCAGCTGGAGAAGGAATTGGTTCAAGCCAGACTGAGTGAAGCCGAGTCTCAGTGTGCACTGAAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS CAA 72 bp | AGCCTGCTCCAGCTTAGCCCTGGCCGCATCAGTCTGTaGTTTGATGGTGGCCAACTCCCGTTTTATGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: SLLQLSPGRISL*FDGGQLPFYEV Trigger: TACCTCATAAAACGGGAGTTGGCCACCATCAAACAACAGACTGATGCGGCCAGGGCTAAGCTGGAGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128723.8 |
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| CDS CAA 90 bp | GGTGCTTTCAGCCTGCTCCAGCTTAGCCCTGGCCGCATCAGTCTGTaGTTTGATGGTGGCCAACTCCCGTTTTATGAGGTAGTTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAFSLLQLSPGRISL*FDGGQLPFYEVVFL Trigger: GAGGAAAACTACCTCATAAAACGGGAGTTGGCCACCATCAAACAACAGACTGATGCGGCCAGGGCTAAGCTGGAGCAGGCTGAAAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128723.8 |
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| CDS CCA 72 bp | TCAATCTCTGCCTGTCTGCGCTTTGCCTCACTTAACTaGGCAAGCAAGCCCTTGTTCTTCACAGACAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SISACLRFASLN*ASKPLFFTDSE Trigger: CTCGCTGTCTGTGAAGAACAAGGGCTTGCTTGCCCAGTTAAGTGAGGCAAAGCGCAGACAGGCAGAGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS CAA 72 bp | CAGTGCACACTGAGACTCGGCTTCACTCAGTCTGGCTaGAACCAATTCCTTCTCCAGCTGCAGCACGAAATC | + |
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Preference number: 6 (lower is better) Translates to: QCTLRLGFTQSG*NQFLLQLQHEI Trigger: GATTTCGTGCTGCAGCTGGAGAAGGAATTGGTTCAAGCCAGACTGAGTGAAGCCGAGTCTCAGTGTGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS CAA 90 bp | CATCTCCTTCAGTGCACACTGAGACTCGGCTTCACTCAGTCTGGCTaGAACCAATTCCTTCTCCAGCTGCAGCACGAAATCTTCGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: HLLQCTLRLGFTQSG*NQFLLQLQHEIFVV Trigger: TACAACGAAGATTTCGTGCTGCAGCTGGAGAAGGAATTGGTTCAAGCCAGACTGAGTGAAGCCGAGTCTCAGTGTGCACTGAAGGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS TCA 72 bp | CTTCTTCTGGCATCTGCATCAGCAACAATCCAACGATaGAAGCACTGCCCTGACAGTAACCAACCTCACGGT | + |
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Preference number: 6 (lower is better) Translates to: LLLASASATIQR*KHCPDSNQPHG Trigger: ACCGTGAGGTTGGTTACTGTCAGGGCAGTGCTTTCATCGTTGGATTGTTGCTGATGCAGATGCCAGAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 |
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| CDS CAA 72 bp | CCTTGTTCTTGCATTCAATCTCTGCCTGTCTGCGCTTaGCCTCACTTAACTGGGCAAGCAAGCCCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PCSCIQSLPVCA*PHLTGQASPCS Trigger: AGAACAAGGGCTTGCTTGCCCAGTTAAGTGAGGCAAAGCGCAGACAGGCAGAGATTGAATGCAAGAACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS CAA 90 bp | CTGCTTCGCTCTCACTGCCATCTGCCAAAGCAGGATTCAGAGACATaGGGCCAGATTTTCTGTGCAAAGGAAAACCAATGGCACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLRSHCHLPKQDSET*GQIFCAKENQWHFP Trigger: AGGAAAGTGCCATTGGTTTTCCTTTGCACAGAAAATCTGGCCCAATGTCTCTGAATCCTGCTTTGGCAGATGGCAGTGAGAGCGAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS GCA 72 bp | CTCTATATCCAACACTTTATCCTGCATCTCCTTCAGTaGACACTGAGACTCGGCTTCACTCAGTCTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LYIQHFILHLLQ*TLRLGFTQSGL Trigger: CAAGCCAGACTGAGTGAAGCCGAGTCTCAGTGTGCACTGAAGGAGATGCAGGATAAAGTGTTGGATATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS CAA 90 bp | CACCTTCTCCTGCAGACTGTTCACCTCTTGCTCCGCTCTTCGAAGTaGGTTACTATTGATCTGGTTCTGTGTCTCCATTTCCATCATCCT | + |
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Preference number: 6 (lower is better) Translates to: HLLLQTVHLLLRSSK*VTIDLVLCLHFHHP Trigger: AGGATGATGGAAATGGAGACACAGAACCAGATCAATAGTAACCAACTTCGAAGAGCGGAGCAAGAGGTGAACAGTCTGCAGGAGAAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS TCA 72 bp | CTGACTGACTGTATGCGATACTGTGTTCTTCACCCATaGGAGAGTAGAACTCAGCTTTTCTGCCACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LTDCMRYCVLHP*ESRTQLFCHLV Trigger: GACAAGGTGGCAGAAAAGCTGAGTTCTACTCTCTCATGGGTGAAGAACACAGTATCGCATACAGTCAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000155955.2 |
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| CDS CAA 72 bp | CTGCAGACTGTTCACCTCTTGCTCCGCTCTTCGAAGTaGGTTACTATTGATCTGGTTCTGTGTCTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: LQTVHLLLRSSK*VTIDLVLCLHF Trigger: GAAATGGAGACACAGAACCAGATCAATAGTAACCAACTTCGAAGAGCGGAGCAAGAGGTGAACAGTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112642.8 ENSMUST00000128723.8 |
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| CDS TCA 72 bp | ATGAGTGGAACAATTCATCGTCTCCTATTAGATGGCTaGCAATGTGGATTCCATCAAAAGGAGGTCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: MSGTIHRLLLDG*QCGFHQKEVGW Trigger: CCAGCCGACCTCCTTTTGATGGAATCCACATTGTCAGCCATCTAATAGGAGACGATGAATTGTTCCACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS CCA 72 bp | AACAATTCATCGTCTCCTATTAGATGGCTGACAATGTaGATTCCATCAAAAGGAGGTCGGCTGGAGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: NNSSSPIRWLTM*IPSKGGRLEKS Trigger: GGACTTCTCCAGCCGACCTCCTTTTGATGGAATCCACATTGTCAGCCATCTAATAGGAGACGATGAATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS CCA 72 bp | AGTTCCGGAAGATACTCCTGTATCATACATTCAAACTaGTACATACAAAGGCCCAATTCCGCCATACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSGRYSCIIHSN*YIQRPNSAILG Trigger: GCCAAGTATGGCGGAATTGGGCCTTTGTATGTACCAGTTTGAATGTATGATACAGGAGTATCTTCCGGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 |
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| CDS TCA 72 bp | GCATTACATAAAAGTTGCCACACTATTGCTCTGAAGTaGTGGGGTATCCCTTTACGAACAAGCTCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: ALHKSCHTIALK*WGIPLRTSSFT Trigger: AGTGAAGGAGCTTGTTCGTAAAGGGATACCCCATCACTTCAGAGCAATAGTGTGGCAACTTTTATGTAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 ENSMUST00000155955.2 |
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| CDS CAA 90 bp | GGTATCCCTTTACGAACAAGCTCCTTCACTTGCTTTTCTTTCTTCTaGCGTACATCATCCCATTCATTCACAATTCTTCCCCAGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: GIPLRTSSFTCFSFF*RTSSHSFTILPQRI Trigger: GATTCTCTGGGGAAGAATTGTGAATGAATGGGATGATGTACGCAAGAAGAAAGAAAAGCAAGTGAAGGAGCTTGTTCGTAAAGGGATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 ENSMUST00000155955.2 |
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| CDS TCA 72 bp | TTAATTTTTCTGGGCCACCATCAAACTGATGTGGAATaGCCTTCTGAAAGTGCTGTAACATCCCTTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: LIFLGHHQTDVE*PSESAVTSLPC Trigger: ACATGGAAGGGATGTTACAGCACTTTCAGAAGGTCATTCCACATCAGTTTGATGGTGGCCCAGAAAAATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 |
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| CDS GCA 72 bp | CCAGCTGCAGCACGAAATCTTCGTTGTAGGTGGAACTaGATTTATGTTTTTCTAATGTTTCAATGCGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: PAAARNLRCRWN*IYVFLMFQCAV Trigger: AACAGCGCATTGAAACATTAGAAAAACATAAATGCAGTTCCACCTACAACGAAGATTTCGTGCTGCAGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112642.8 |
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| CDS CAA 90 bp | TGGAGGCTGATGAACTTGATACAAGAGAGGAACCACTGTTTCTTCTaGACCCATTCACTGATCTTAAAGACTTACTGTCTGTCTCTATTA | + |
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Preference number: 6 (lower is better) Translates to: WRLMNLIQERNHCFF*THSLILKTYCLSLL Trigger: TAATAGAGACAGACAGTAAGTCTTTAAGATCAGTGAATGGGTCAAGAAGAAACAGTGGTTCCTCTCTTGTATCAAGTTCATCAGCCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 ENSMUST00000155955.2 |
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| CDS CAA 72 bp | ATGAACTTGATACAAGAGAGGAACCACTGTTTCTTCTaGACCCATTCACTGATCTTAAAGACTTACTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: MNLIQERNHCFF*THSLILKTYCL Trigger: CAGACAGTAAGTCTTTAAGATCAGTGAATGGGTCAAGAAGAAACAGTGGTTCCTCTCTTGTATCAAGTTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 ENSMUST00000155955.2 |
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| CDS CCA 72 bp | TCACAAGGTGAAGTCATTTTCAGGAGTTCTGAATACTaGTCCTTAATTGTCATACTCTGTGCATTACATAAA | + |
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Preference number: 6 (lower is better) Translates to: SQGEVIFRSSEY*SLIVILCALHK Trigger: TTTATGTAATGCACAGAGTATGACAATTAAGGACCAGTATTCAGAACTCCTGAAAATGACTTCACCTTGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000112642.8 ENSMUST00000124034.8 ENSMUST00000128723.8 ENSMUST00000138111.8 ENSMUST00000155955.2 |
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