Pregenerated sensors for EVI2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078771Ensembl transcript IDs: ENSMUST00000103236.4, ENSMUST00000146611.2, ENSMUST00000154415.2, ENSMUST00000170799.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACAAAGAGCATGTCAGACTTTGGATCATCTGAGCAAACGTGGATaGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: KQRACQTLDHLSKRG*EIPPASFISNSAFL Trigger: GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTTGCTCAGATGATCCAAAGTCTGACATGCTCTTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR CAA 90 bp | CTCTCCCTGGCTGCTGTAAGCACACCAGGAGATTGCAATAGGAGGTaGGAGCCTGTGAGCTCCTTTGCTCTTTTCCAAGTGTCCGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLAAVSTPGDCNRR*EPVSSFALFQVSDS Trigger: TGAGTCGGACACTTGGAAAAGAGCAAAGGAGCTCACAGGCTCCAACCTCCTATTGCAATCTCCTGGTGTGCTTACAGCAGCCAGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154415.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCATCTGAGCAAACGTaGATGGGAAATACCACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ANVDGKYHQPALFLTLPSSSEQT*MGNTTS Trigger: GCTGGTGGTATTTCCCATCCACGTTTGCTCAGATGA...GGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCAGACTTTGGATCATCTaGGCAAACGTGGATGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ANVDGKYHQPALFLTLPSRLWII*ANVDGK Trigger: TTTCCCATCCACGTTTGCTCAGATGATCCAAAGTCT...GGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTGCCTTCCTCATTGCTaGTTTGCATTTCCCTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ANVDGKYHQPALFLTLPSCLPHC*FAFPFP Trigger: TGGAAAGGGAAATGCAAAGCAGCAATGAGGAAGGCA...GGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTCATCTGAGCAAACGTaGATGGGAAATACCACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KRGWEIPPASFISNSAFLSSEQT*MGNTTS Trigger: GCTGGTGGTATTTCCCATCCACGTTTGCTCAGATGA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTCCTCATTGCTGCTTTaGATTTCCCTTTCCAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: KRGWEIPPASFISNSAFLSSLLL*ISLSNP Trigger: TGGGTTGGAAAGGGAAATGCAAAGCAGCAATGAGGA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTGCCTTCCTCATTGCTaGTTTGCATTTCCCTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KRGWEIPPASFISNSAFLCLPHC*FAFPFP Trigger: TGGAAAGGGAAATGCAAAGCAGCAATGAGGAAGGCA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR GCA 90 bp | TACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCTGCCTTCCTCATTGCTaGTTTGCATTTCCCTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: YISLSGLTLNKEHVRLWICLPHC*FAFPFP Trigger: TGGAAAGGGAAATGCAAAGCAGCAATGAGGAAGGCA...GATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTTCATCTGAGCAAACGTaGATGGGAAATACCACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GSKGLKELFQVQVHSDRGSSEQT*MGNTTS Trigger: GCTGGTGGTATTTCCCATCCACGTTTGCTCAGATGA...ACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCATACATCTCCCTTTCTaGTCTGACGCTAAACAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KRGWEIPPASFISNSAFLIHLPF*SDAKQR Trigger: TCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTAT...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR TCA 90 bp | TACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCAACAGATATAAACCTTaGGCAAGCATACATCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: YISLSGLTLNKEHVRLWINRYKP*ASIHLP Trigger: AGGGAGATGTATGCTTGCTCAAGGTTTATATCTGTT...GATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| 3UTR-3UTR CCA 90 bp | TACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCATACATCTCCCTTTCTaGTCTGACGCTAAACAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: YISLSGLTLNKEHVRLWIIHLPF*SDAKQR Trigger: TCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTAT...GATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGTACATTCAGACAGAGGTCATTCACTGCTGAACAGGAATGTTTAATTACCAGACTTTGGATCATCTaGGCAAACGTGGATGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SSTFRQRSFTAEQECLITRLWII*ANVDGK Trigger: TTTCCCATCCACGTTTGCTCAGATGATCCAAAGTCT...GGTAATTAAACATTCCTGTTCAGCAGTGAATGACCTCTGTCTGAATGTACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTCATTCCTCATTGCTGCTTTaGATTTCCCTTTCCAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: SKGLKELFQVQVHSDRGHSSLLL*ISLSNP Trigger: TGGGTTGGAAAGGGAAATGCAAAGCAGCAATGAGGA...ATGACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTCATCTCTGCCTTCCTCATTaGTGCTTTGCATTTCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SKGLKELFQVQVHSDRGHLCLPH*CFAFPF Trigger: AAAGGGAAATGCAAAGCAGCAATGAGGAAGGCAGAG...ATGACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGCTCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAAACAGATATAAACCTTaGGCAAGCATACATCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LGSKGLKELFQVQVHSDRNRYKP*ASIHLP Trigger: AGGGAGATGTATGCTTGCTCAAGGTTTATATCTGTT...TCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGAGCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| 3UTR TCA 72 bp | GCACACCAGGAGATTGCAATAGGAGGTTGGAGCCTGTaGGCTCCTTTGCTCTTTTCCAAGTGTCCGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AHQEIAIGGWSL*APLLFSKCPTQ Trigger: CTGAGTCGGACACTTGGAAAAGAGCAAAGGAGCTCACAGGCTCCAACCTCCTATTGCAATCTCCTGGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154415.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTTCCTCATTGCTGCTTaGCATTTCCCTTTCCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: ANVDGKYHQPALFLTLPSFLIAA*HFPFQP Trigger: GGGTTGGAAAGGGAAATGCAAAGCAGCAATGAGGAA...GGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAAGCATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGATTCCTCATTGCTGCTTaGCATTTCCCTTTCCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: EQAYISLSGLTLNKEHVRFLIAA*HFPFQP Trigger: GGGTTGGAAAGGGAAATGCAAAGCAGCAATGAGGAA...TCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTATGCTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| 3UTR TCA 72 bp | ACGCTAAACAAAGAGCATGTCAGACTTTGGATCATCTaGGCAAACGTGGATGGGAAATACCACCAGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLNKEHVRLWII*ANVDGKYHQPA Trigger: AGCTGGCTGGTGGTATTTCCCATCCACGTTTGCTCAGATGATCCAAAGTCTGACATGCTCTTTGTTTAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCTTCCTCATTGCTGCTTaGCATTTCCCTTTCCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: YISLSGLTLNKEHVRLWIFLIAA*HFPFQP Trigger: GGGTTGGAAAGGGAAATGCAAAGCAGCAATGAGGAA...GATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTTTCCAAGTGTCCGACTCAGCAGTCCAGAGCCCACTACTTGCCAGAAATGGCGCTTGCCTACTTaGTTTGACCTTGTGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSFPSVRLSSPEPTTCQKWRLPT*FDLVTH Trigger: GTGGGTCACAAGGTCAAAGCAAGTAGGCAAGCGCCA...TTTCTGGCAAGTAGTGGGCTCTGGACTGCTGAGTCGGACACTTGGAAAAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154415.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGCATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGATTGGAGAACTGTTTCTaGAGGCATGGGGCGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQAYISLSGLTLNKEHVRLENCF*RHGAWR Trigger: CCTCCACGCCCCATGCCTTCAGAAACAGTTCTCCAA...TCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTATGCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGCATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGAGGAGGTTGGAGCCTGTaGGCTCCTTTGCTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQAYISLSGLTLNKEHVRGGWSL*APLLFS Trigger: GGAAAAGAGCAAAGGAGCTCACAGGCTCCAACCTCC...TCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTATGCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTTTCCAAGTGTCCGACTCAGCAGTCCAGAGCCCACTACTTGCCAGAAATGTCACTCGGATGTCTaGTGGAGCCATTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSFPSVRLSSPEPTTCQKCHSDV*WSHSDY Trigger: GTAATCAGAATGGCTCCAGCAGACATCCGAGTGACA...TTTCTGGCAAGTAGTGGGCTCTGGACTGCTGAGTCGGACACTTGGAAAAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154415.2 |
||
| CDS-3UTR GCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTCCGCGGCTGGCGCTTaGCTACTTGCTTTGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRGWEIPPASFISNSAFLSAAGA*LLALTF Trigger: AAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCCTGATTACTGGAACCTaGGGCAGTGACACTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRGWEIPPASFISNSAFLLITGT*GSDTAS Trigger: GCTAGCAGTGTCACTGCCTCAGGTTCCAGTAATCAG...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGCATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTGCTGGAGCCATTCTaGTTACTGGAACCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQAYISLSGLTLNKEHVRLLEPF*LLEPEA Trigger: TGCCTCAGGTTCCAGTAATCAGAATGGCTCCAGCAG...TCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTATGCTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | TACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCTTGGAGAACTGTTTCTaGAGGCATGGGGCGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YISLSGLTLNKEHVRLWILENCF*RHGAWR Trigger: CCTCCACGCCCCATGCCTTCAGAAACAGTTCTCCAA...GATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | GCAAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCAGCACACCAGGAGATTaGAATAGGAGGTTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ANVDGKYHQPALFLTLPSSTPGD*NRRLEP Trigger: AGGCTCCAACCTCCTATTGCAATCTCCTGGTGTGCT...GGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CCA 90 bp | AACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCACTGTTTCTGAAGGCATaGGGCGTGGAGGACTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVDGKYHQPALFLTLPSSLFLKA*GVEDLS Trigger: ACTCAAGTCCTCCACGCCCCATGCCTTCAGAAACAG...TGAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGCATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTGTTTCTGAAGGCATaGGGCGTGGAGGACTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EQAYISLSGLTLNKEHVRLFLKA*GVEDLS Trigger: ACTCAAGTCCTCCACGCCCCATGCCTTCAGAAACAG...TCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTATGCTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | AACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCAGACCCACGGCAGGAGTaGCAAGGTTTGTGTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVDGKYHQPALFLTLPSSDPRQE*QGLCYC Trigger: ACAATAACACAAACCTTGTCACTCCTGCCGTGGGTC...TGAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCGCCTGTGAGCTCCTTTaGTCTTTTCCAAGTGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KRGWEIPPASFISNSAFLACELL*SFPSVR Trigger: TCGGACACTTGGAAAAGAGCAAAGGAGCTCACAGGC...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTCAGTTCCTTCTTCGTaGTTTCTCTCCCTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRGWEIPPASFISNSAFLSVPSS*FLSLAA Trigger: AGCAGCCAGGGAGAGAAAGCACGAAGAAGGAACTGA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTCTGATTACTGGAACCTaGGGCAGTGACACTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKGLKELFQVQVHSDRGLITGT*GSDTAS Trigger: GCTAGCAGTGTCACTGCCTCAGGTTCCAGTAATCAG...ACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | ATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCTGCTGGAGCCATTCTaGTTACTGGAACCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHLPFWSDAKQRACQTLDLLEPF*LLEPEA Trigger: TGCCTCAGGTTCCAGTAATCAGAATGGCTCCAGCAG...ATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGCATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGATGTCACTCGGATGTCTaGTGGAGCCATTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: EQAYISLSGLTLNKEHVRCHSDV*WSHSDY Trigger: GTAATCAGAATGGCTCCAGCAGACATCCGAGTGACA...TCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTATGCTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGTACATTCAGACAGAGGTCATTCACTGCTGAACAGGAATGTTTAATTACCGGAGGTTGGAGCCTGTaGGCTCCTTTGCTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTFRQRSFTAEQECLITGGWSL*APLLFS Trigger: GGAAAAGAGCAAAGGAGCTCACAGGCTCCAACCTCC...GGTAATTAAACATTCCTGTTCAGCAGTGAATGACCTCTGTCTGAATGTACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCATTTGGCGCTTGCCTACTTaGTTTGACCTTTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGWEIPPASFISNSAFLIWRLPT*FDLLRD Trigger: ATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCA...AATGAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTGGCGCTTGCCTACTTaGTTTGACCTTTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KRGWEIPPASFISNSAFLWRLPT*FDLLRD Trigger: ATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGTACATTCAGACAGAGGTCATTCACTGCTGAACAGGAATGTTTAATTACCTCCGCGGCTGGCGCTTaGCTACTTGCTTTGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTFRQRSFTAEQECLITSAAGA*LLALTF Trigger: AAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGA...GGTAATTAAACATTCCTGTTCAGCAGTGAATGACCTCTGTCTGAATGTACTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | ATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATGCCTGTGAGCTCCTTTaGTCTTTTCCAAGTGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IHLPFWSDAKQRACQTLDACELL*SFPSVR Trigger: TCGGACACTTGGAAAAGAGCAAAGGAGCTCACAGGC...ATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTCATCTGATTACTGGAACCTaGGGCAGTGACACTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKGLKELFQVQVHSDRGHLITGT*GSDTAS Trigger: GCTAGCAGTGTCACTGCCTCAGGTTCCAGTAATCAG...ATGACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCTCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGACCCACGGCAGGAGTaGCAAGGTTTGTGTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSKGLKELFQVQVHSDRDPRQE*QGLCYC Trigger: ACAATAACACAAACCTTGTCACTCCTGCCGTGGGTC...TCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGAGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | ATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATTGTCACTCGGATGTCTaGTGGAGCCATTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: IHLPFWSDAKQRACQTLDCHSDV*WSHSDY Trigger: GTAATCAGAATGGCTCCAGCAGACATCCGAGTGACA...ATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS-3UTR CCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTTTGATCTCTGCTGTTaGAGAACTGTTTCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRGWEIPPASFISNSAFLFDLCC*RTVSEG Trigger: GCCTTCAGAAACAGTTCTCCAACAGCAGAGATCAAA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGTACATTCAGACAGAGGTCATTCACTGCTGAACAGGAATGTTTAATTACCGACCCACGGCAGGAGTaGCAAGGTTTGTGTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTFRQRSFTAEQECLITDPRQE*QGLCYC Trigger: ACAATAACACAAACCTTGTCACTCCTGCCGTGGGTC...GGTAATTAAACATTCCTGTTCAGCAGTGAATGACCTCTGTCTGAATGTACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCCTTGCTTTGACCTTTTaGGAGATGAGACTTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRGWEIPPASFISNSAFLLALTF*EMRLCL Trigger: CAAACAAAGTCTCATCTCTCAAAAGGTCAAAGCAAG...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTCATAGCACACCAGGAGATTaGAATAGGAGGTTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKGLKELFQVQVHSDRGHSTPGD*NRRLEP Trigger: AGGCTCCAACCTCCTATTGCAATCTCCTGGTGTGCT...ATGACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTCATTCAGTTCCTTCTTCGTaGTTTCTCTCCCTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKGLKELFQVQVHSDRGHSVPSS*FLSLAA Trigger: AGCAGCCAGGGAGAGAAAGCACGAAGAAGGAACTGA...ATGACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGATTTGATCTCTGCTGTTaGAGAACTGTTTCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSKGLKELFQVQVHSDRFDLCC*RTVSEG Trigger: GCCTTCAGAAACAGTTCTCCAACAGCAGAGATCAAA...TCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGAGCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGATTAAGCAAATTAGCATaGCCGTGTTGCTGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSKGLKELFQVQVHSDRLSKLA*PCCWCS Trigger: AGAACACCAGCAACACGGCCATGCTAATTTGCTTAA...TCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGAGCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGTACATTCAGACAGAGGTCATTCACTGCTGAACAGGAATGTTTAATTACCTTAAACGTTTCCCCCTaGCTTTTGATCTCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTFRQRSFTAEQECLITLNVSP*LLISAV Trigger: AACAGCAGAGATCAAAAGTCAGGGGGAAACGTTTAA...GGTAATTAAACATTCCTGTTCAGCAGTGAATGACCTCTGTCTGAATGTACTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGAGGTCATTTAAACGTTTCCCCCTaGCTTTTGATCTCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKGLKELFQVQVHSDRGHLNVSP*LLISAV Trigger: AACAGCAGAGATCAAAAGTCAGGGGGAAACGTTTAA...ATGACCTCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS GCA 90 bp | TGCTCTTTTCCAAGTGTCCGACTCAGCAGTCCAGAGCCCACTACTTaGCAGAAAGTCACCGTTGCTCCGCGGCTGGCGCTTGCCTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSFPSVRLSSPEPTT*QKVTVAPRLALAYL Trigger: CAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGACTGCTGAGTCGGACACTTGGAAAAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS TCA 90 bp | CACCGTTGCTCCGCGGCTGGCGCTTGCCTACTTGCTTTGACCTTGTaGCCCACGGCAGGAGTGACAAGGTTTGTGTTATTGTCACTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HRCSAAGACLLALTL*PTAGVTRFVLLSLG Trigger: TCCGAGTGACAATAACACAAACCTTGTCACTCCTGCCGTGGGTCACAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154415.2 |
||
| CDS TCA 90 bp | ATGCAGGCTTGTCTGTGGCGCTCACCTTGTGACCCACGGCAGGAGTaGCAAGGTTTGTGTTATTGTCACTCGGATGTCTGCTGGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: MQACLWRSPCDPRQE*QGLCYCHSDVCWSH Trigger: ATGGCTCCAGCAGACATCCGAGTGACAATAACACAAACCTTGTCACTCCTGCCGTGGGTCACAAGGTGAGCGCCACAGACAAGCCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CCA 90 bp | GTCCAGAGCCCACTACTTGCCAGAAAGTCACCGTTGCTCCGCGGCTaGCGCTTGCCTACTTGCTTTGACCTTTTGAGAGATGAGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQSPLLARKSPLLRG*RLPTCFDLLRDETL Trigger: CAAAGTCTCATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CAA 90 bp | AACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCACTCCGCGGCTGGCGCTaGCCTACTTGCTTTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: NVDGKYHQPALFLTLPSSLRGWR*PTCFDL Trigger: AAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAG...TGAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS TCA 90 bp | ATTGTCACTCGGATGTCTGCTGGAGCCATTCTGATTACTGGAACCTaGGGCAGTGACACTGCTAGCCCACAGGTGTGTGTAGTTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVTRMSAGAILITGT*GSDTASPQVCVVWS Trigger: AGACCAAACTACACACACCTGTGGGCTAGCAGTGTCACTGCCTCAGGTTCCAGTAATCAGAATGGCTCCAGCAGACATCCGAGTGACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS GCA 90 bp | CCAGAAGACGACGAGGCCCACACTGTTGTCATCAGGAAAACAAGATaGAGGTACTGTCCTTTGTGCTCCATACCTACAGGTCCACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PEDDEAHTVVIRKTR*RYCPLCSIPTGPLL Trigger: TAGCAGTGGACCTGTAGGTATGGAGCACAAAGGACAGTACCTGCATCTTGTTTTCCTGATGACAACAGTGTGGGCCTCGTCGTCTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146611.2 |
||
| CDS-3UTR CAA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCTGGGGCGTGGAGGACTaGAGTGTAGATGTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRGWEIPPASFISNSAFLWGVED*SVDVEA Trigger: AGCTTCCACATCTACACTCAAGTCCTCCACGCCCCA...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CAA 90 bp | ATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCTCCGCGGCTGGCGCTaGCCTACTTGCTTTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: IHLPFWSDAKQRACQTLDLRGWR*PTCFDL Trigger: AAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAG...ATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS TCA 90 bp | CACCGTTGCTCCGCGGCTGGCGCTTGCCTACTTGCTTTGACCTTTTaGGAGATGAGACTTTGTTTGCCAGAACCACAGTTGATAGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: HRCSAAGACLLALTF*EMRLCLPEPQLIEI Trigger: TATTTCTATCAACTGTGGTTCTGGCAAACAAAGTCTCATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CAA 90 bp | TACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGACTTTGGATCTGGGGCGTGGAGGACTaGAGTGTAGATGTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YISLSGLTLNKEHVRLWIWGVED*SVDVEA Trigger: AGCTTCCACATCTACACTCAAGTCCTCCACGCCCCA...GATCCAAAGTCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTCTAAGGGCTTAAAAGAACTCTTCCAAGTTCAAGTACATTCAGACAGACTCCGCGGCTGGCGCTaGCCTACTTGCTTTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGSKGLKELFQVQVHSDRLRGWR*PTCFDL Trigger: AAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAG...TCTGTCTGAATGTACTTGAACTTGGAAGAGTTCTTTTAAGCCCTTAGAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CAA 90 bp | AAACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCGAGATGAGACTTTGTTaGCCAGAACCACAGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: KRGWEIPPASFISNSAFLEMRLC*PEPQLI Trigger: TATCAACTGTGGTTCTGGCAAACAAAGTCTCATCTC...GAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGCATACATCTCCCTTTCTGGTCTGACGCTAAACAAAGAGCATGTCAGAGAGATGAGACTTTGTTaGCCAGAACCACAGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: EQAYISLSGLTLNKEHVREMRLC*PEPQLI Trigger: TATCAACTGTGGTTCTGGCAAACAAAGTCTCATCTC...TCTGACATGCTCTTTGTTTAGCGTCAGACCAGAAAGGGAGATGTATGCTTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS-3UTR CAA 90 bp | AACGTGGATGGGAAATACCACCAGCCAGCTTTATTTCTAACTCTGCCTTCCTCATTGAGAGATGAGACTTaGTTTGCCAGAACCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NVDGKYHQPALFLTLPSSLRDET*FARTTV Trigger: AACTGTGGTTCTGGCAAACAAAGTCTCATCTCTCAA...TGAGGAAGGCAGAGTTAGAAATAAAGCTGGCTGGTGGTATTTCCCATCCACGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS GCA 90 bp | CACACTGTTGTCATCAGGAAAACAAGATGCAGGTACTGTCCTTTGTaGTCCATACCTACAGGTCCACTGCTATCTTTTGTTATTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: HTVVIRKTRCRYCPL*SIPTGPLLSFVIGF Trigger: GAATCCAATAACAAAAGATAGCAGTGGACCTGTAGGTATGGAGCACAAAGGACAGTACCTGCATCTTGTTTTCCTGATGACAACAGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146611.2 |
||
| CDS GCA 72 bp | CCAAGTGTCCGACTCAGCAGTCCAGAGCCCACTACTTaGCAGAAAGTCACCGTTGCTCCGCGGCTGGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSVRLSSPEPTT*QKVTVAPRLAL Trigger: AAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGACTGCTGAGTCGGACACTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 72 bp | TCCAAGTGTCCGACTCAGCAGTCCAGAGCCCACTACTaGCCAGAAAGTCACCGTTGCTCCGCGGCTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKCPTQQSRAHY*PESHRCSAAGA Trigger: AGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGACTGCTGAGTCGGACACTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS GCA 72 bp | CAGTCCAGAGCCCACTACTTGCCAGAAAGTCACCGTTaGTCCGCGGCTGGCGCTTGCCTACTTGCTTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: QSRAHYLPESHR*SAAGACLLALT Trigger: GGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 72 bp | GCAGTCCAGAGCCCACTACTTGCCAGAAAGTCACCGTaGCTCCGCGGCTGGCGCTTGCCTACTTGCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVQSPLLARKSP*LRGWRLPTCFD Trigger: GTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 90 bp | TCCGACTCAGCAGTCCAGAGCCCACTACTTGCCAGAAAGTCACCGTaGCTCCGCGGCTGGCGCTTGCCTACTTGCTTTGACCTTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SDSAVQSPLLARKSP*LRGWRLPTCFDLLR Trigger: TCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGACTGCTGAGTCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 90 bp | TTGCTCTTTTCCAAGTGTCCGACTCAGCAGTCCAGAGCCCACTACTaGCCAGAAAGTCACCGTTGCTCCGCGGCTGGCGCTTGCCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: LLFSKCPTQQSRAHY*PESHRCSAAGACLL Trigger: AAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCTCTGGACTGCTGAGTCGGACACTTGGAAAAGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS TCA 72 bp | TCCGCGGCTGGCGCTTGCCTACTTGCTTTGACCTTGTaGCCCACGGCAGGAGTGACAAGGTTTGTGTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: SAAGACLLALTL*PTAGVTRFVLL Trigger: CAATAACACAAACCTTGTCACTCCTGCCGTGGGTCACAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154415.2 |
||
| CDS TCA 72 bp | CGGATGTCTGCTGGAGCCATTCTGATTACTGGAACCTaGGGCAGTGACACTGCTAGCCCACAGGTGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RMSAGAILITGT*GSDTASPQVCV Trigger: TACACACACCTGTGGGCTAGCAGTGTCACTGCCTCAGGTTCCAGTAATCAGAATGGCTCCAGCAGACATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103236.4 ENSMUST00000154415.2 ENSMUST00000170799.8 |
||
| CDS TCA 72 bp | TGTCTGTGGCGCTCACCTTGTGACCCACGGCAGGAGTaGCAAGGTTTGTGTTATTGTCACTCGGATGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLWRSPCDPRQE*QGLCYCHSDVC Trigger: GCAGACATCCGAGTGACAATAACACAAACCTTGTCACTCCTGCCGTGGGTCACAAGGTGAGCGCCACAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CCA 72 bp | CCACTACTTGCCAGAAAGTCACCGTTGCTCCGCGGCTaGCGCTTGCCTACTTGCTTTGACCTTTTGAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLARKSPLLRG*RLPTCFDLLRD Trigger: ATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 72 bp | CTTGCCAGAAAGTCACCGTTGCTCCGCGGCTGGCGCTaGCCTACTTGCTTTGACCTTTTGAGAGATGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LARKSPLLRGWR*PTCFDLLRDET Trigger: AGTCTCATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 90 bp | AGCCCACTACTTGCCAGAAAGTCACCGTTGCTCCGCGGCTGGCGCTaGCCTACTTGCTTTGACCTTTTGAGAGATGAGACTTTGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPLLARKSPLLRGWR*PTCFDLLRDETLFA Trigger: GGCAAACAAAGTCTCATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTTTCTGGCAAGTAGTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 90 bp | TCTGCTGTTGGAGAACTGTTTCTGAAGGCATGGGGCGTGGAGGACTaGAGTGTAGATGTGGAAGCTAAAGGCACAGGGGGAGATGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SAVGELFLKAWGVED*SVDVEAKGTGGDDA Trigger: TGCATCATCTCCCCCTGTGCCTTTAGCTTCCACATCTACACTCAAGTCCTCCACGCCCCATGCCTTCAGAAACAGTTCTCCAACAGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS TCA 72 bp | TCCGCGGCTGGCGCTTGCCTACTTGCTTTGACCTTTTaGGAGATGAGACTTTGTTTGCCAGAACCACAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SAAGACLLALTF*EMRLCLPEPQL Trigger: CAACTGTGGTTCTGGCAAACAAAGTCTCATCTCTCAAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CCA 72 bp | TTGATCTCTGCTGTTGGAGAACTGTTTCTGAAGGCATaGGGCGTGGAGGACTTGAGTGTAGATGTGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LISAVGELFLKA*GVEDLSVDVEA Trigger: AGCTTCCACATCTACACTCAAGTCCTCCACGCCCCATGCCTTCAGAAACAGTTCTCCAACAGCAGAGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 90 bp | GCCCACACTGTTGTCATCAGGAAAACAAGATGCAGGTACTGTCCTTaGTGCTCCATACCTACAGGTCCACTGCTATCTTTTGTTATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AHTVVIRKTRCRYCP*CSIPTGPLLSFVIG Trigger: TCCAATAACAAAAGATAGCAGTGGACCTGTAGGTATGGAGCACAAAGGACAGTACCTGCATCTTGTTTTCCTGATGACAACAGTGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146611.2 |
||
| CDS CCA 72 bp | GGAAAAGCACTGCAATTACAATTAAGCAAATTAGCATaGCCGTGTTGCTGGTGTTCTCCTCACAGACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GKALQLQLSKLA*PCCWCSPHRLP Trigger: AGGAAGTCTGTGAGGAGAACACCAGCAACACGGCCATGCTAATTTGCTTAATTGTAATTGCAGTGCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 72 bp | GTTGTCATCAGGAAAACAAGATGCAGGTACTGTCCTTaGTGCTCCATACCTACAGGTCCACTGCTATCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VVIRKTRCRYCP*CSIPTGPLLSF Trigger: AAAAGATAGCAGTGGACCTGTAGGTATGGAGCACAAAGGACAGTACCTGCATCTTGTTTTCCTGATGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146611.2 |
||
| CDS CAA 90 bp | AGGAAAAGCACTGCAATTACAATTAAGCAAATTAGCATGGCCGTGTaGCTGGTGTTCTCCTCACAGACTTCCTTTTTAAACGTTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RKSTAITIKQISMAV*LVFSSQTSFLNVSP Trigger: GGGGGAAACGTTTAAAAAGGAAGTCTGTGAGGAGAACACCAGCAACACGGCCATGCTAATTTGCTTAATTGTAATTGCAGTGCTTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 72 bp | ACTGCAATTACAATTAAGCAAATTAGCATGGCCGTGTaGCTGGTGTTCTCCTCACAGACTTCCTTTTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: TAITIKQISMAV*LVFSSQTSFLN Trigger: GTTTAAAAAGGAAGTCTGTGAGGAGAACACCAGCAACACGGCCATGCTAATTTGCTTAATTGTAATTGCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103236.4 ENSMUST00000170799.8 |
||
| CDS CAA 72 bp | CTTTGTGCTCCATACCTACAGGTCCACTGCTATCTTTaGTTATTGGATTCTTCTCAACTGAATTTGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCAPYLQVHCYL*LLDSSQLNLLF Trigger: AAACAACAAATTCAGTTGAGAAGAATCCAATAACAAAAGATAGCAGTGGACCTGTAGGTATGGAGCACAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146611.2 |
||