Pregenerated sensors for EVI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070354Ensembl transcript IDs: ENSMUST00000093983.11, ENSMUST00000170422.4
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCAGTCTAGAAAGCCAGCTGTCACTTTACAGCAGCTCTGTAGGTaGAGGTGGCAGGGAGTCTGTGAGGTCTGGATGGAGGTCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: GQSRKPAVTLQQLCR*RWQGVCEVWMEVRS Trigger: ACTCCTGACCTCCATCCAGACCTCACAGACTCCCTGCCACCTCCACCTACAGAGCTGCTGTAAAGTGACAGCTGGCTTTCTAGACTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR GCA 90 bp | TGGGCTTCAGTCAGGGGTCAGGTAGTCCCTAAAGAGTCTCTCAGGTaGCAGGTGTCATGTCCTGTGTGCCATACCACGAAGACAGGAACG | + |
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Preference number: 1 (lower is better) Translates to: WASVRGQVVPKESLR*QVSCPVCHTTKTGT Trigger: CGTTCCTGTCTTCGTGGTATGGCACACAGGACATGACACCTGGCACCTGAGAGACTCTTTAGGGACTACCTGACCCCTGACTGAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR TCA 90 bp | AATACAGCCTATCTCTTTGACCTCCACCCCCACGCCCCAAACATTTaGAGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: NTAYLFDLHPHAPNI*RGRGGGRGGGGRGG Trigger: CCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCTTCCTCTTCAAATGTTTGGGGCGTGGGGGTGGAGGTCAAAGAGATAGGCTGTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR GCA 90 bp | GTGTCATGTCCTGTGTGCCATACCACGAAGACAGGAACGTGTCGGTaGCATCTCAGGATGGAGGGCAGTCTAGAAAGCCAGCTGTCACTT | + |
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Preference number: 1 (lower is better) Translates to: VSCPVCHTTKTGTCR*HLRMEGSLESQLSL Trigger: AAGTGACAGCTGGCTTTCTAGACTGCCCTCCATCCTGAGATGGCACCGACACGTTCCTGTCTTCGTGGTATGGCACACAGGACATGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR CCA 90 bp | TCTAGAAAGCCAGCTGTCACTTTACAGCAGCTCTGTAGGTGGAGGTaGCAGGGAGTCTGTGAGGTCTGGATGGAGGTCAGGAGTAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SRKPAVTLQQLCRWR*QGVCEVWMEVRSRE Trigger: TTCTCTACTCCTGACCTCCATCCAGACCTCACAGACTCCCTGCCACCTCCACCTACAGAGCTGCTGTAAAGTGACAGCTGGCTTTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR CCA 90 bp | CATAACTTCCTGGGACTTCAGTTCCAGGATGGCTGGTATCCTCTGTaGTCTCCACAGACACCCTCACACAGGCTGGTATCATGCATGTGT | + |
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Preference number: 1 (lower is better) Translates to: HNFLGLQFQDGWYPL*SPQTPSHRLVSCMC Trigger: ACACATGCATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGAGGATACCAGCCATCCTGGAACTGAAGTCCCAGGAAGTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR GCA 90 bp | TATCCTCTGTGGTCTCCACAGACACCCTCACACAGGCTGGTATCATaGATGTGTGGGAAGAGACACACAGATACAGCCCACTTCTATTTT | + |
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Preference number: 1 (lower is better) Translates to: YPLWSPQTPSHRLVS*MCGKRHTDTAHFYF Trigger: AAAATAGAAGTGGGCTGTATCTGTGTGTCTCTTCCCACACATGCATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGAGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR TCA 90 bp | GTAATAATAATAAGAGAAGGATGGCTTGTTGGGCAGATGAACATTTaGCATCTGCAAAAGGTAGGCCAGTACCCACTGCCGCCTCCACTT | + |
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Preference number: 1 (lower is better) Translates to: VIIIREGWLVGQMNI*HLQKVGQYPLPPPL Trigger: AAGTGGAGGCGGCAGTGGGTACTGGCCTACCTTTTGCAGATGTCAAATGTTCATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR GCA 90 bp | TGCCGCCTCCACTTTAACAAAAGTTGTGCCCACTTCTGTTCTGAGTaGCTCATACTCAACAACCTTCAGGTGATGATTACATTCCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: CRLHFNKSCAHFCSE*LILNNLQVMITFLH Trigger: ATGCAGGAATGTAATCATCACCTGAAGGTTGTTGAGTATGAGGCACTCAGAACAGAAGTGGGCACAACTTTTGTTAAAGTGGAGGCGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR CCA 90 bp | GCACTTACAGAGGACTTGGAGTCAGTTCCAGGACTCACGGGGCATTaGCAAATGTTAGTAGTGCCATCTTCTGTCTTATATATATGTGTG | + |
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Preference number: 1 (lower is better) Translates to: ALTEDLESVPGLTGH*QMLVVPSSVLYICV Trigger: CACACATATATATAAGACAGAAGATGGCACTACTAACATTTGCCAATGCCCCGTGAGTCCTGGAACTGACTCCAAGTCCTCTGTAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR TCA 90 bp | ATAGTACCGATTAATATGGCAGCAATTGCATTGTGGTTGTTTTTATaGGCAGTTCCTTTGCCACTTGGTGGTTCTGAAGTGAGTGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: IVPINMAAIALWLFL*AVPLPLGGSEVSGG Trigger: ACCACCACTCACTTCAGAACCACCAAGTGGCAAAGGAACTGCTCATAAAAACAACCACAATGCAATTGCTGCCATATTAATCGGTACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR TCA 90 bp | TCTGGTGTTTCTCCATCAGCAAATGGAGACCTACCTGCCCAGTTTTaGTCATTTAAGACTGGCTTCCTCAAGTATTTCCACAGTATAATC | + |
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Preference number: 1 (lower is better) Translates to: SGVSPSANGDLPAQF*SFKTGFLKYFHSII Trigger: GATTATACTGTGGAAATACTTGAGGAAGCCAGTCTTAAATGATCAAAACTGGGCAGGTAGGTCTCCATTTGCTGATGGAGAAACACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR CCA 90 bp | GTCCTTTCTTGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTaGGCAGATGAACATTTGACATCTGCAAAAGGTAGGCCAGTACCC | + |
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Preference number: 1 (lower is better) Translates to: VLSWTCNNNKRRMAC*ADEHLTSAKGRPVP Trigger: GGGTACTGGCCTACCTTTTGCAGATGTCAAATGTTCATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCAAGAAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR TCA 90 bp | CCAACTGTTGACCCATCAGCACTGTCTTCTGATAAGCCATTTATTTaGACTTCTACATTATCAGTCTTGAGGTTGCTGGTATCATTAATG | + |
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Preference number: 1 (lower is better) Translates to: PTVDPSALSSDKPFI*TSTLSVLRLLVSLM Trigger: CATTAATGATACCAGCAACCTCAAGACTGATAATGTAGAAGTTCAAATAAATGGCTTATCAGAAGACAGTGCTGATGGGTCAACAGTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR TCA 90 bp | GTTGTAATTGCTTCTGTCTCTGAGAAAAACGTATTGTCCAGGTATTaGCAAAGCACAATGAAGACCAGATACTTGAATTCCATTTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: VVIASVSEKNVLSRY*QSTMKTRYLNSISD Trigger: ATCTGAAATGGAATTCAAGTATCTGGTCTTCATTGTGCTTTGTCAATACCTGGACAATACGTTTTTCTCAGAGACAGAAGCAATTACAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCAGTACAGCCTATCTCTTTaGCCTCCACCCCCACGCCCC | + |
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Preference number: 2 (lower is better) Translates to: FEDSGSIERECQDSQGYQYSLSL*PPPPRP Trigger: GGGGCGTGGGGGTGGAGGTCAAAGAGATAGGCTGTA...CTGGTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCAGAGGACTCAGCAGCTCTGTAGGTaGAGGTGGCAGGGAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: DSGSIERECQDSQGYQRTQQLCR*RWQGVC Trigger: ACAGACTCCCTGCCACCTCCACCTACAGAGCTGCTG...AGTCCTCTGGTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGAAGAACGGAGTTGCAGGGGCTCGGTGGTTAAGAGCACTTACAGAGGACGAGGCAAGGAGTTGTTaGCCGCTGATTCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: EGKNGVAGARWLRALTEDEARSC*PLILLV Trigger: GACAAGCAGAATCAGCGGTCAACAACTCCTTGCCTC...GTCCTCTGTAAGTGCTCTTAACCACCGAGCCCCTGCAACTCCGTTCTTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCAGAGAGGTAGGAGCAGGTaGTGGTGGCTGTTGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FEDSGSIERECQDSQGYQRGRSR*WWLLCG Trigger: TCCACACAACAGCCACCATCACCTGCTCCTACCTCT...CTGGTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGGCGGGAATGGCTCTTGGATCTTGGAATGCTGTTCTTCACACACTTGATGCCACTTGGTGGTTCTaGAGTGAGTGGTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GVAGMALGSWNAVLHTLDATWWF*SEWWWW Trigger: CCACCACCACCACTCACTTCAGAACCACCAAGTGGC...ATCAAGTGTGTGAAGAACAGCATTCCAAGATCCAAGAGCCATTCCCGCCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR GCA 90 bp | GAGAGTGCCAGGACAGCCAGGGCTACCAGAGGACTCCTGTCTCAGAACACAAACAAAGAGTCTCTCAGGTaGCAGGTGTCATGTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ESARTARATRGLLSQNTNKESLR*QVSCPV Trigger: CACAGGACATGACACCTGGCACCTGAGAGACTCTTT...GTTTGTGTTCTGAGACAGGAGTCCTCTGGTAGCCCTGGCTGTCCTGGCACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCACAGGCTGGTATCATaGATGTGTGGGAAGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: EFEDSGSIERECQDSQGYHRLVS*MCGKRH Trigger: GTGTCTCTTCCCACACATGCATGATACCAGCCTGTG...GTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTGGTATCCTCTGTGGTCTCCACAGACACCCTCACACAGGCTGGTATCATAGTGATTTGGGCAGGTaGTGCTTGCTGTCCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: MAGILCGLHRHPHTGWYHSDLGR*CLLSRR Trigger: TCTTCTGGACAGCAAGCATCACCTGCCCAAATCACT...ATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGAGGATACCAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTACCCACTGCCGCCTCCACTTTAACAAAAGTTGTGCCCACTTCTGTTCTGGCTGTACCAACTGTTaGCCCATCAGCACTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ASTHCRLHFNKSCAHFCSGCTNC*PISTVF Trigger: GAAGACAGTGCTGATGGGTCAACAGTTGGTACAGCC...AGAACAGAAGTGGGCACAACTTTTGTTAAAGTGGAGGCGGCAGTGGGTACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCTACCTGCCCAGTTTTaGTCATTTAAGACTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: EFEDSGSIERECQDSQGYLPAQF*SFKTGF Trigger: GAAGCCAGTCTTAAATGATCAAAACTGGGCAGGTAG...GTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR CCA 90 bp | AAATCTCCTGCTGACAGAGGCACATTAAATGAGTCAGGGGGTGGCGGGAATGGCGACATGTTGGTGATTTaGCTGAGAGAGCAAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: KSPADRGTLNESGGGGNGDMLVI*LREQRG Trigger: ACCCCTTTGCTCTCTCAGCCAAATCACCAACATGTC...GCCATTCCCGCCACCCCCTGACTCATTTAATGTGCCTCTGTCAGCAGGAGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCAGGTATTGTCCAGGTATTaGCAAAGCACAATGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: FEDSGSIERECQDSQGYQVLSRY*QSTMKT Trigger: GGTCTTCATTGTGCTTTGTCAATACCTGGACAATAC...CTGGTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCACTTCTGTTCTGAGTaGCTCATACTCAACAACCTT | + |
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Preference number: 2 (lower is better) Translates to: EFEDSGSIERECQDSQGYHFCSE*LILNNL Trigger: AAGGTTGTTGAGTATGAGGCACTCAGAACAGAAGTG...GTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACATACAACTGTCACTGTaGGCTTGTTTGGTAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: EFEDSGSIERECQDSQGYIQLSL*ACLVGS Trigger: AGAACCTACCAAACAAGCCCACAGTGACAGTTGTAT...GTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | AACTTGCTGCTGTCCTATAGGACCCAAGTTCAGTTCCCAGTACCCGTGTTAGACAGTGAACCCAGATGGTaGTGTTTGAGGCAAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: NLLLSYRTQVQFPVPVLDSEPRW*CLRQGV Trigger: AACTCCTTGCCTCAAACATCACCATCTGGGTTCACT...GTCTAACACGGGTACTGGGAACTGAACTTGGGTCCTATAGGACAGCAGCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCAGGTAGACAGTGATTGCTaGTCTGTTGTAATTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: FEDSGSIERECQDSQGYQVDSDC*SVVIAS Trigger: AGAAGCAATTACAACAGAGCAGCAATCACTGTCTAC...CTGGTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGGCGGGAATGGCTCTTGGATCTTGGAATGCTGTTCTTCACACACTTGATAGAGACATAAACAGCTaGTGTTGCTTGTTCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GVAGMALGSWNAVLHTLDRDINS*CCLFRS Trigger: ACTCCTGAACAAGCAACACCAGCTGTTTATGTCTCT...ATCAAGTGTGTGAAGAACAGCATTCCAAGATCCAAGAGCCATTCCCGCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | AACTTGCTGCTGTCCTATAGGACCCAAGTTCAGTTCCCAGTACCCGTGTTAGACATAAGTAAGTGGGCTTaGAGAGACATAAACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NLLLSYRTQVQFPVPVLDISKWA*RDINSW Trigger: CCAGCTGTTTATGTCTCTTCAAGCCCACTTACTTAT...GTCTAACACGGGTACTGGGAACTGAACTTGGGTCCTATAGGACAGCAGCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGGCGGGAATGGCTCTTGGATCTTGGAATGCTGTTCTTCACACACTTGATATGCCTCACTCTCTCTaGTGTTATCCATACACATTT | + |
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Preference number: 2 (lower is better) Translates to: GVAGMALGSWNAVLHTLDMPHSL*CYPYTF Trigger: AAATGTGTATGGATAACATCAGAGAGAGTGAGGCAT...ATCAAGTGTGTGAAGAACAGCATTCCAAGATCCAAGAGCCATTCCCGCCACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR CAA 90 bp | TTGATAGAATCATTTGGTAAAGGAGATACAACTGTCACTGTGGGCTaGTTTGGTAGGTTCTCATCCAAATCAAGAAGGGGAGGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LIESFGKGDTTVTVG*FGRFSSKSRRGGGR Trigger: CCTGCCACCTCCCCTTCTTGATTTGGATGAGAACCTACCAAACAAGCCCACAGTGACAGTTGTATCTCCTTTACCAAATGATTCTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR CAA 90 bp | AGCACTTACAGAGGACTTGGAGTCAGTTCCAGGACTCACGGGGCATaGGCAAATGTTAGTAGTGCCATCTTCTGTCTTATATATATGTGT | + |
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Preference number: 2 (lower is better) Translates to: STYRGLGVSSRTHGA*ANVSSAIFCLIYMC Trigger: ACACATATATATAAGACAGAAGATGGCACTACTAACATTTGCCAATGCCCCGTGAGTCCTGGAACTGACTCCAAGTCCTCTGTAAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTTCTTGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTGGGCAGATGGAGTCTGTGAGGTCTaGATGGAGGTCAGGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: VLSWTCNNNKRRMACWADGVCEV*MEVRSR Trigger: TCTACTCCTGACCTCCATCCAGACCTCACAGACTCC...ATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCAAGAAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTTCTTGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTGGGCAGATCAGTTCCAGGATGGCTaGTATCCTCTGTGGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VLSWTCNNNKRRMACWADQFQDG*YPLWSP Trigger: TGGAGACCACAGAGGATACCAGCCATCCTGGAACTG...ATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCAAGAAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCTTGAGGTTGCTGGTATCATTAATGTGTTCACTTGATTCAAACAACTTATTGGTGGTTCTGAAGTaGGTGGTGGTGGTGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVLRLLVSLMCSLDSNNLLVVLK*VVVVVV Trigger: CACCACCACCACCACCACTCACTTCAGAACCACCAA...TAAGTTGTTTGAATCAAGTGAACACATTAATGATACCAGCAACCTCAAGACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR GCA 90 bp | TACACATTTCTGGTGTTTCTCCATCAGCAAATGGAGACCTACCTGCCCAGTTTTACTCAAAGCATTCCCTaGTGTGTTTTGAGAATCAGT | + |
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Preference number: 2 (lower is better) Translates to: YTFLVFLHQQMETYLPSFTQSIP*CVLRIS Trigger: ACTGATTCTCAAAACACAGCAGGGAATGCTTTGAGT...AAAACTGGGCAGGTAGGTCTCCATTTGCTGATGGAGAAACACCAGAAATGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR TCA 90 bp | AGTAGTAATAGTAGCAGTAGTAGTAAAACTCCACTGCCCGAGAACCTTCTTGTTTTGAATCTTGTTGTCTaGCTCAAAGCATTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSNSSSSSKTPLPENLLVLNLVV*LKAFPA Trigger: AGCAGGGAATGCTTTGAGTCAGACAACAAGATTCAA...AACAAGAAGGTTCTCGGGCAGTGGAGTTTTACTACTACTGCTACTATTACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGGTAAATGTATCCCAAACACAGCACTCAGACTTCATGTTTTAATACAGTGTTCAGGAGTGATTTaGGCAGGTGATGCTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FQGKCIPNTALRLHVLIQCSGVI*AGDACC Trigger: ACAGCAAGCATCACCTGCCCAAATCACTCCTGAACA...CTGTATTAAAACATGAAGTCTGAGTGCTGTGTTTGGGATACATTTACCCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTCTTTTAAGGTGTTTAAAGGTCACACCGTTAATCACAAAGATTGGGAGAAGTAGACTCTACTTCTaGTTTTCCAGAAGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: QCLLRCLKVTPLITKIGRSRLYF*FSRRGR Trigger: CCTACCTCTTCTGGAAAACCAGAAGTAGAGTCTACT...TCTCCCAATCTTTGTGATTAACGGTGTGACCTTTAAACACCTTAAAAGACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTAATAGTAGCAGTAGTAGTAAAACTCCACTGCCCGAGAACCTTCTTGTTATAATAAGAGAAGGATaGCTTGTTGGGCAGATGAAC | + |
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Preference number: 2 (lower is better) Translates to: SSNSSSSSKTPLPENLLVIIREG*LVGQMN Trigger: GTTCATCTGCCCAACAAGCCATCCTTCTCTTATTAT...AACAAGAAGGTTCTCGGGCAGTGGAGTTTTACTACTACTGCTACTATTACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCACTTTTTCAGGGTAAATGTATCCCAAACACAGCACTCAGACTTCATGTTTTTCCCTGCTGTGTTTTaGGAATCAGTTGTAACATAT | + |
|
Preference number: 2 (lower is better) Translates to: AHFFRVNVSQTQHSDFMFFPAVF*ESVVTY Trigger: ATATGTTACAACTGATTCTCAAAACACAGCAGGGAA...AAACATGAAGTCTGAGTGCTGTGTTTGGGATACATTTACCCTGAAAAAGTGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTTTCTTGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTGGGCAGATTTGTGGTTGTTTTTATaGGCAGTTCCTTTGCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: VLSWTCNNNKRRMACWADLWLFL*AVPLPL Trigger: AAGTGGCAAAGGAACTGCTCATAAAAACAACCACAA...ATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCAAGAAAGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR TCA 90 bp | TGCCAAAATCTGTGCTCTAAGCAACTGTCCTTTCTTGGACTTGTAATAATAATACAGAAGAAATGTTCTTaGATCTTGTTGTCTGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: CQNLCSKQLSFLGLVIIIQKKCS*ILLSDS Trigger: TGAGTCAGACAACAAGATTCAAGAACATTTCTTCTG...TATTATTATTACAAGTCCAAGAAAGGACAGTTGCTTAGAGCACAGATTTTGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR CCA 72 bp | CCAGCTGTCACTTTACAGCAGCTCTGTAGGTGGAGGTaGCAGGGAGTCTGTGAGGTCTGGATGGAGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PAVTLQQLCRWR*QGVCEVWMEVR Trigger: CCTGACCTCCATCCAGACCTCACAGACTCCCTGCCACCTCCACCTACAGAGCTGCTGTAAAGTGACAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR GCA 72 bp | AGAGGAGGAGGAGGAAGAGGAGGGGAAGAACGGAGTTaGAGGGGCTCGGTGGTTAAGAGCACTTACAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RGGGGRGGEERS*RGSVVKSTYRG Trigger: TCCTCTGTAAGTGCTCTTAACCACCGAGCCCCTGCAACTCCGTTCTTCCCCTCCTCTTCCTCCTCCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR GCA 72 bp | GTCAGGGGTCAGGTAGTCCCTAAAGAGTCTCTCAGGTaGCAGGTGTCATGTCCTGTGTGCCATACCACGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VRGQVVPKESLR*QVSCPVCHTTK Trigger: CTTCGTGGTATGGCACACAGGACATGACACCTGGCACCTGAGAGACTCTTTAGGGACTACCTGACCCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR CCA 72 bp | CTGGGACTTCAGTTCCAGGATGGCTGGTATCCTCTGTaGTCTCCACAGACACCCTCACACAGGCTGGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: LGLQFQDGWYPL*SPQTPSHRLVS Trigger: TGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGAGGATACCAGCCATCCTGGAACTGAAGTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR TCA 72 bp | TATCTCTTTGACCTCCACCCCCACGCCCCAAACATTTaGAGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YLFDLHPHAPNI*RGRGGGRGGGG Trigger: TCCTCCTCCTCCTCTTCCTCCTCCTCTTCCTCTTCAAATGTTTGGGGCGTGGGGGTGGAGGTCAAAGAGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR GCA 72 bp | TGGTCTCCACAGACACCCTCACACAGGCTGGTATCATaGATGTGTGGGAAGAGACACACAGATACAGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: WSPQTPSHRLVS*MCGKRHTDTAH Trigger: GTGGGCTGTATCTGTGTGTCTCTTCCCACACATGCATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR CCA 72 bp | GCTCATAACTTCCTGGGACTTCAGTTCCAGGATGGCTaGTATCCTCTGTGGTCTCCACAGACACCCTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: AHNFLGLQFQDG*YPLWSPQTPSH Trigger: GTGTGAGGGTGTCTGTGGAGACCACAGAGGATACCAGCCATCCTGGAACTGAAGTCCCAGGAAGTTATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGGTCTCCACAGACACCCTCACACAGGCTGGTATCATGCATGTGTGGGAACAACTGATGCACGCTTaGTGGATGCCTCACTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SVVSTDTLTQAGIMHVWEQLMHA*WMPHSL Trigger: GAGAGAGTGAGGCATCCACAAAGCGTGCATCAGTTG...TTCCCACACATGCATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGGCGGGAATGGCTCTTGGATCTTGGAATGCTGTTCTTCACACACTTGATGGACATGTTGGTGATTaGGCTGAGAGAGCAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GVAGMALGSWNAVLHTLDGHVGD*AERAKG Trigger: CCCCTTTGCTCTCTCAGCCAAATCACCAACATGTCC...ATCAAGTGTGTGAAGAACAGCATTCCAAGATCCAAGAGCCATTCCCGCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | GTTTTTATGAGCAGTTCCTTTGCCACTTGGTGGTTCTaGAGTGAGTGGTGGTGGTGGTGGTGGTGGTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VFMSSSFATWWF*SEWWWWWWWCV Trigger: GACACACCACCACCACCACCACCACCACTCACTTCAGAACCACCAAGTGGCAAAGGAACTGCTCATAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | CATTCCTGCATTTACAAAAGGAGGCTGGGGCTGCAGTaGTGGGTCAGTACTTTAGAGAACTTGCTGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HSCIYKRRLGLQ*WVSTLENLLLS Trigger: GGACAGCAGCAAGTTCTCTAAAGTACTGACCCATCACTGCAGCCCCAGCCTCCTTTTGTAAATGCAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTGGTATCCTCTGTGGTCTCCACAGACACCCTCACACAGGCTGGTATCATCGTATTGTCCAGGTATaGACAAAGCACAATGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MAGILCGLHRHPHTGWYHRIVQV*TKHNED Trigger: GTCTTCATTGTGCTTTGTCAATACCTGGACAATACG...ATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGAGGATACCAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGGGAGTCTGTGAGGTCTGGATGGAGGTCAGGAGTAGAGAACTCCTGGCATTATCAGTCTTGAGGTaGCTGGTATCATTAATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WQGVCEVWMEVRSRELLALSVLR*LVSLMC Trigger: ACACATTAATGATACCAGCAACCTCAAGACTGATAA...TGCCAGGAGTTCTCTACTCCTGACCTCCATCCAGACCTCACAGACTCCCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | GGGCAGGTGATGCTTGCTGTCCAGAAGAAATGTTCTTaGATCTTGTTGTCTGACTCAAAGCATTCCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GQVMLAVQKKCS*ILLSDSKHSLL Trigger: CAGCAGGGAATGCTTTGAGTCAGACAACAAGATTCAAGAACATTTCTTCTGGACAGCAAGCATCACCTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR CCA 72 bp | GAGGACTTGGAGTCAGTTCCAGGACTCACGGGGCATTaGCAAATGTTAGTAGTGCCATCTTCTGTCTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: EDLESVPGLTGH*QMLVVPSSVLY Trigger: ATATAAGACAGAAGATGGCACTACTAACATTTGCCAATGCCCCGTGAGTCCTGGAACTGACTCCAAGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTACCCACTGCCGCCTCCACTTTAACAAAAGTTGTGCCCACTTCTGTTCTAAGATGTTTTGGTGGTaGTCCAGTAGAATTATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ASTHCRLHFNKSCAHFCSKMFWW*SSRIIG Trigger: ACCTATAATTCTACTGGACAACCACCAAAACATCTT...AGAACAGAAGTGGGCACAACTTTTGTTAAAGTGGAGGCGGCAGTGGGTACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTACCCACTGCCGCCTCCACTTTAACAAAAGTTGTGCCCACTTCTGTTCTTCTACATTATCAGTCTaGAGGTTGCTGGTATCATTA | + |
|
Preference number: 3 (lower is better) Translates to: ASTHCRLHFNKSCAHFCSSTLSV*RLLVSL Trigger: TAATGATACCAGCAACCTCAAGACTGATAATGTAGA...AGAACAGAAGTGGGCACAACTTTTGTTAAAGTGGAGGCGGCAGTGGGTACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGTAATAGTAGCAGTAGTAGTAAAACTCCACTGCCCGAGAACCTTCTTGTTTGGCGGGAATGGCTCTaGGATCTTGGAATGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSNSSSSSKTPLPENLLVWREWL*DLGMLF Trigger: GAACAGCATTCCAAGATCCAAGAGCCATTCCCGCCA...AACAAGAAGGTTCTCGGGCAGTGGAGTTTTACTACTACTGCTACTATTACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | AAGAGACATAAACAGCTGGTGTTGCTTGTTCAGGAGTaGTTTGGGCAGGTGATGCTTGCTGTCCAGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KRHKQLVLLVQE*FGQVMLAVQKK Trigger: TTTCTTCTGGACAGCAAGCATCACCTGCCCAAATCACTCCTGAACAAGCAACACCAGCTGTTTATGTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACTTTTTCAGGGTAAATGTATCCCAAACACAGCACTCAGACTTCATGTTTAACAGCTGGTGTTGCTaGTTCAGGAGTGATTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AHFFRVNVSQTQHSDFMFNSWCC*FRSDLG Trigger: GCCCAAATCACTCCTGAACAAGCAACACCAGCTGTT...AAACATGAAGTCTGAGTGCTGTGTTTGGGATACATTTACCCTGAAAAAGTGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAAAATCTGTGCTCTAAGCAACTGTCCTTTCTTGGACTTGTAATAATAATAATACAGCCTATCTCTTaGACCTCCACCCCCACGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CQNLCSKQLSFLGLVIIIIQPIS*TSTPTP Trigger: GGGCGTGGGGGTGGAGGTCAAAGAGATAGGCTGTAT...TATTATTATTACAAGTCCAAGAAAGGACAGTTGCTTAGAGCACAGATTTTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR TCA 72 bp | TCTCCATCAGCAAATGGAGACCTACCTGCCCAGTTTTaGTCATTTAAGACTGGCTTCCTCAAGTATTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SPSANGDLPAQF*SFKTGFLKYFH Trigger: GTGGAAATACTTGAGGAAGCCAGTCTTAAATGATCAAAACTGGGCAGGTAGGTCTCCATTTGCTGATGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | CAACTGATGCACGCTTTGTGGATGCCTCACTCTCTCTaGTGTTATCCATACACATTTCTGGTGTTTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QLMHALWMPHSL*CYPYTFLVFLH Trigger: ATGGAGAAACACCAGAAATGTGTATGGATAACATCAGAGAGAGTGAGGCATCCACAAAGCGTGCATCAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | GGCTCTTGGATCTTGGAATGCTGTTCTTCACACACTTaGTTTAGACCATCTGGAGATGGTTGGGGATTGATA | + |
|
Preference number: 3 (lower is better) Translates to: GSWILECCSSHT*FRPSGDGWGLI Trigger: TATCAATCCCCAACCATCTCCAGATGGTCTAAATCAAGTGTGTGAAGAACAGCATTCCAAGATCCAAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR GCA 72 bp | GTTGCTTGTTCAGGAGTGATTTGGGCAGGTGATGCTTaGTGTCCAGAAGAAATGTTCTTGAATCTTGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VACSGVIWAGDA*CPEEMFLNLVV Trigger: GACAACAAGATTCAAGAACATTTCTTCTGGACAGCAAGCATCACCTGCCCAAATCACTCCTGAACAAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR CCA 72 bp | AAGGTGTTTAAAGGTCACACCGTTAATCACAAAGATTaGGAGACAGAGGCAGGTGTATCTGTGAGTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KVFKGHTVNHKD*ETEAGVSVSLR Trigger: CCTCAAACTCACAGATACACCTGCCTCTGTCTCCCAATCTTTGTGATTAACGGTGTGACCTTTAAACACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR TCA 72 bp | TTCTGCTTGTCTGGTAATGTTATAAGTAAGTGGGCTTaGAGAGACATAAACAGCTGGTGTTGCTTGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FCLSGNVISKWA*RDINSWCCLFR Trigger: CCTGAACAAGCAACACCAGCTGTTTATGTCTCTTCAAGCCCACTTACTTATAACATTACCAGACAAGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR GCA 72 bp | CACTTTAACAAAAGTTGTGCCCACTTCTGTTCTGAGTaGCTCATACTCAACAACCTTCAGGTGATGATTACA | + |
|
Preference number: 3 (lower is better) Translates to: HFNKSCAHFCSE*LILNNLQVMIT Trigger: TGTAATCATCACCTGAAGGTTGTTGAGTATGAGGCACTCAGAACAGAAGTGGGCACAACTTTTGTTAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGTCTTTTAAGGTGTTTAAAGGTCACACCGTTAATCACAAAGATTGGGAGATCACTGTGGGCTTGTTaGGTAGGTTCTCATCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QCLLRCLKVTPLITKIGRSLWAC*VGSHPN Trigger: ATTTGGATGAGAACCTACCAAACAAGCCCACAGTGA...TCTCCCAATCTTTGTGATTAACGGTGTGACCTTTAAACACCTTAAAAGACACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | GCTTCTGTCTCTGAGAAAAACGTATTGTCCAGGTATTaGCAAAGCACAATGAAGACCAGATACTTGAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASVSEKNVLSRY*QSTMKTRYLNS Trigger: GGAATTCAAGTATCTGGTCTTCATTGTGCTTTGTCAATACCTGGACAATACGTTTTTCTCAGAGACAGAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | ATTAATATGGCAGCAATTGCATTGTGGTTGTTTTTATaGGCAGTTCCTTTGCCACTTGGTGGTTCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: INMAAIALWLFL*AVPLPLGGSEV Trigger: CACTTCAGAACCACCAAGTGGCAAAGGAACTGCTCATAAAAACAACCACAATGCAATTGCTGCCATATTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | GACCCATCAGCACTGTCTTCTGATAAGCCATTTATTTaGACTTCTACATTATCAGTCTTGAGGTTGCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DPSALSSDKPFI*TSTLSVLRLLV Trigger: TACCAGCAACCTCAAGACTGATAATGTAGAAGTTCAAATAAATGGCTTATCAGAAGACAGTGCTGATGGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| 3UTR TCA 72 bp | GAGGATAAAGGTTGCTTGCTGTCAGGTCTCATGACTTaGGTTCTGAATTTTATCCTTGAGGTGGAAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EDKGCLLSGLMT*VLNFILEVEEK Trigger: TTTTTCTTCCACCTCAAGGATAAAATTCAGAACTCAAGTCATGAGACCTGACAGCAAGCAACCTTTATCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR GCA 72 bp | GTAGTAGTAATAGTAGCAGTAGTAGTAAAACTCCACTaGCCGAGAACCTTCTTGTTTTTATTCTACATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VVVIVAVVVKLH*PRTFLFLFYMG Trigger: TCCCATGTAGAATAAAAACAAGAAGGTTCTCGGGCAGTGGAGTTTTACTACTACTGCTACTATTACTACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR CCA 72 bp | TGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTaGGCAGATGAACATTTGACATCTGCAAAAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: WTCNNNKRRMAC*ADEHLTSAKGR Trigger: CCTACCTTTTGCAGATGTCAAATGTTCATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGTCTTTTAAGGTGTTTAAAGGTCACACCGTTAATCACAAAGATTGGGAGAATTCCCTGCTGTGTTTaGAGAATCAGTTGTAACATA | + |
|
Preference number: 3 (lower is better) Translates to: QCLLRCLKVTPLITKIGRIPCCV*RISCNI Trigger: TATGTTACAACTGATTCTCAAAACACAGCAGGGAAT...TCTCCCAATCTTTGTGATTAACGGTGTGACCTTTAAACACCTTAAAAGACACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| CDS-3UTR TCA 90 bp | AGTTCCAGGATGGCTGGTATCCTCTGTGGTCTCCACAGACACCCTCACACAGGCGCCACTTGGTGGTTCTaGAGTGAGTGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRMAGILCGLHRHPHTGATWWF*SEWWWW Trigger: CCACCACCACCACTCACTTCAGAACCACCAAGTGGC...GCCTGTGTGAGGGTGTCTGTGGAGACCACAGAGGATACCAGCCATCCTGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACGTGGCAGGGAGTCTGTaGGGTCTGGATGGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFEDSGSIERECQDSQGYVAGSL*GLDGGQ Trigger: CTGACCTCCATCCAGACCTCACAGACTCCCTGCCAC...GTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
||
| 3UTR CAA 72 bp | GCAGGGGCTCGGTGGTTAAGAGCACTTACAGAGGACTaGGAGTCAGTTCCAGGACTCACGGGGCATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGARWLRALTED*ESVPGLTGHWQ Trigger: TTGCCAATGCCCCGTGAGTCCTGGAACTGACTCCAAGTCCTCTGTAAGTGCTCTTAACCACCGAGCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGTGCCAGGACAGCCAGGGCTACCAGAGGACTCCTGTCTCAGAACACAAACAGTGATTTGGGCAGGTaGTGCTTGCTGTCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESARTARATRGLLSQNTNSDLGR*CLLSRR Trigger: TCTTCTGGACAGCAAGCATCACCTGCCCAAATCACT...GTTTGTGTTCTGAGACAGGAGTCCTCTGGTAGCCCTGGCTGTCCTGGCACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
||
| CDS-3UTR TCA 90 bp | GACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCAGAGGACTCAGATCTGCATCATCTaGAGACACGGCTGTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSGSIERECQDSQGYQRTQICII*RHGCTN Trigger: GTTGGTACAGCCGTGTCTTCAGATGATGCAGATCTG...AGTCCTCTGGTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGTCTCCACAGACACCCTCACACAGGCTGGTATCATGCATGTGTGGGAAGAGGCAAGGAGTTGTTaGCCGCTGATTCTGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVVSTDTLTQAGIMHVWEEARSC*PLILLV Trigger: GACAAGCAGAATCAGCGGTCAACAACTCCTTGCCTC...TTCCCACACATGCATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
||
| CDS-3UTR TCA 90 bp | GAGGGGAAGAACGGAGTTGCAGGGGCTCGGTGGTTAAGAGCACTTACAGAGGACCTACCTGCCCAGTTTTaGTCATTTAAGACTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGKNGVAGARWLRALTEDLPAQF*SFKTGF Trigger: GAAGCCAGTCTTAAATGATCAAAACTGGGCAGGTAG...GTCCTCTGTAAGTGCTCTTAACCACCGAGCCCCTGCAACTCCGTTCTTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
||
| 3UTR CAA 72 bp | GTCTGGATGGAGGTCAGGAGTAGAGAACTCCTGGCATaGAGCCTCGTGGGCCGACTCTTGATTGTTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VWMEVRSRELLA*SLVGRLLIVYK Trigger: TTTATAAACAATCAAGAGTCGGCCCACGAGGCTCAATGCCAGGAGTTCTCTACTCCTGACCTCCATCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
||
| CDS-3UTR TCA 90 bp | AGTTCCAGGATGGCTGGTATCCTCTGTGGTCTCCACAGACACCCTCACACAGGCTTCCCTGCTGTGTTTTaGGAATCAGTTGTAACATAT | + |
|
Preference number: 4 (lower is better) Translates to: SSRMAGILCGLHRHPHTGFPAVF*ESVVTY Trigger: ATATGTTACAACTGATTCTCAAAACACAGCAGGGAA...GCCTGTGTGAGGGTGTCTGTGGAGACCACAGAGGATACCAGCCATCCTGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGTCTCCACAGACACCCTCACACAGGCTGGTATCATGCATGTGTGGGAAATAAGTAAGTGGGCTTaGAGAGACATAAACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVSTDTLTQAGIMHVWEISKWA*RDINSW Trigger: CCAGCTGTTTATGTCTCTTCAAGCCCACTTACTTAT...TTCCCACACATGCATGATACCAGCCTGTGTGAGGGTGTCTGTGGAGACCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR TCA 90 bp | TTTGAGGACAGTGGGTCTATAGAGAGAGAGTGCCAGGACAGCCAGGGCTACCAGTTGTGGTTGTTTTTATaGGCAGTTCCTTTGCCACTT | + |
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Preference number: 4 (lower is better) Translates to: FEDSGSIERECQDSQGYQLWLFL*AVPLPL Trigger: AAGTGGCAAAGGAACTGCTCATAAAAACAACCACAA...CTGGTAGCCCTGGCTGTCCTGGCACTCTCTCTCTATAGACCCACTGTCCTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR GCA 90 bp | AACTTGCTGCTGTCCTATAGGACCCAAGTTCAGTTCCCAGTACCCGTGTTAGACTGGGCAGGTGATGCTTaGTGTCCAGAAGAAATGTTC | + |
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Preference number: 4 (lower is better) Translates to: NLLLSYRTQVQFPVPVLDWAGDA*CPEEMF Trigger: GAACATTTCTTCTGGACAGCAAGCATCACCTGCCCA...GTCTAACACGGGTACTGGGAACTGAACTTGGGTCCTATAGGACAGCAGCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR TCA 90 bp | AGTAGTAATAGTAGCAGTAGTAGTAAAACTCCACTGCCCGAGAACCTTCTTGTTAGAGGTAGGAGCAGGTaGTGGTGGCTGTTGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SSNSSSSSKTPLPENLLVRGRSR*WWLLCG Trigger: TCCACACAACAGCCACCATCACCTGCTCCTACCTCT...AACAAGAAGGTTCTCGGGCAGTGGAGTTTTACTACTACTGCTACTATTACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR GCA 90 bp | GCCAGTACCCACTGCCGCCTCCACTTTAACAAAAGTTGTGCCCACTTCTGTTCTGTAGACAGTGATTGCTaGTCTGTTGTAATTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ASTHCRLHFNKSCAHFCSVDSDC*SVVIAS Trigger: AGAAGCAATTACAACAGAGCAGCAATCACTGTCTAC...AGAACAGAAGTGGGCACAACTTTTGTTAAAGTGGAGGCGGCAGTGGGTACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| 3UTR CAA 72 bp | AGAGGACTTGGAGTCAGTTCCAGGACTCACGGGGCATaGGCAAATGTTAGTAGTGCCATCTTCTGTCTTATA | + |
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Preference number: 4 (lower is better) Translates to: RGLGVSSRTHGA*ANVSSAIFCLI Trigger: TATAAGACAGAAGATGGCACTACTAACATTTGCCAATGCCCCGTGAGTCCTGGAACTGACTCCAAGTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR CAA 72 bp | AATAAGAGAAGGATGGCTTGTTGGGCAGATGAACATTaGACATCTGCAAAAGGTAGGCCAGTACCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: NKRRMACWADEH*TSAKGRPVPTA Trigger: GGCAGTGGGTACTGGCCTACCTTTTGCAGATGTCAAATGTTCATCTGCCCAACAAGCCATCCTTCTCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093983.11 ENSMUST00000170422.4 |
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| 3UTR CAA 72 bp | GATCTGCATCATCTGAAGACACGGCTGTACCAACTGTaGACCCATCAGCACTGTCTTCTGATAAGCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: DLHHLKTRLYQL*THQHCLLISHL Trigger: TAAATGGCTTATCAGAAGACAGTGCTGATGGGTCAACAGTTGGTACAGCCGTGTCTTCAGATGATGCAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| 3UTR CAA 72 bp | TTGGTAAAGGAGATACAACTGTCACTGTGGGCTTGTTaGGTAGGTTCTCATCCAAATCAAGAAGGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LVKEIQLSLWAC*VGSHPNQEGEV Trigger: CACCTCCCCTTCTTGATTTGGATGAGAACCTACCAAACAAGCCCACAGTGACAGTTGTATCTCCTTTACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| CDS-3UTR TCA 90 bp | GTCCTTTCTTGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTGGGCAGATGGCTGTACCAACTGTTaGCCCATCAGCACTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VLSWTCNNNKRRMACWADGCTNC*PISTVF Trigger: GAAGACAGTGCTGATGGGTCAACAGTTGGTACAGCC...ATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCAAGAAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR TCA 90 bp | TGCCAAAATCTGTGCTCTAAGCAACTGTCCTTTCTTGGACTTGTAATAATAATATTGGTGGTTCTGAAGTaGGTGGTGGTGGTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CQNLCSKQLSFLGLVIIILVVLK*VVVVVV Trigger: CACCACCACCACCACCACTCACTTCAGAACCACCAA...TATTATTATTACAAGTCCAAGAAAGGACAGTTGCTTAGAGCACAGATTTTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| 3UTR CAA 72 bp | TCATTTGGTAAAGGAGATACAACTGTCACTGTGGGCTaGTTTGGTAGGTTCTCATCCAAATCAAGAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SFGKGDTTVTVG*FGRFSSKSRRG Trigger: TCCCCTTCTTGATTTGGATGAGAACCTACCAAACAAGCCCACAGTGACAGTTGTATCTCCTTTACCAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| CDS-3UTR TCA 90 bp | TCCTTTCTTGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTGGGCAGATGAGTGAACCCAGATGGTaGTGTTTGAGGCAAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SFLGLVIIIREGWLVGQMSEPRW*CLRQGV Trigger: AACTCCTTGCCTCAAACATCACCATCTGGGTTCACT...CATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCAAGAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR GCA 90 bp | TGCCAAAATCTGTGCTCTAAGCAACTGTCCTTTCTTGGACTTGTAATAATAATACATCTGCTAGCAGTGTaGTTTTACTTGGTTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CQNLCSKQLSFLGLVIIIHLLAV*FYLVSR Trigger: CCTGGAAACCAAGTAAAAGCACACTGCTAGCAGATG...TATTATTATTACAAGTCCAAGAAAGGACAGTTGCTTAGAGCACAGATTTTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR TCA 90 bp | TGCCAAAATCTGTGCTCTAAGCAACTGTCCTTTCTTGGACTTGTAATAATAATAGTATTGTCCAGGTATTaGCAAAGCACAATGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: CQNLCSKQLSFLGLVIIIVLSRY*QSTMKT Trigger: GGTCTTCATTGTGCTTTGTCAATACCTGGACAATAC...TATTATTATTACAAGTCCAAGAAAGGACAGTTGCTTAGAGCACAGATTTTGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR TCA 90 bp | TCCTTTCTTGGACTTGTAATAATAATAAGAGAAGGATGGCTTGTTGGGCAGATGCAGAAGAAATGTTCTTaGATCTTGTTGTCTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: SFLGLVIIIREGWLVGQMQKKCS*ILLSDS Trigger: TGAGTCAGACAACAAGATTCAAGAACATTTCTTCTG...CATCTGCCCAACAAGCCATCCTTCTCTTATTATTATTACAAGTCCAAGAAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR TCA 90 bp | TGCCAAAATCTGTGCTCTAAGCAACTGTCCTTTCTTGGACTTGTAATAATAATAATGCCTCACTCTCTCTaGTGTTATCCATACACATTT | + |
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Preference number: 4 (lower is better) Translates to: CQNLCSKQLSFLGLVIIIMPHSL*CYPYTF Trigger: AAATGTGTATGGATAACATCAGAGAGAGTGAGGCAT...TATTATTATTACAAGTCCAAGAAAGGACAGTTGCTTAGAGCACAGATTTTGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS-3UTR GCA 90 bp | TGCCAAAATCTGTGCTCTAAGCAACTGTCCTTTCTTGGACTTGTAATAATAATAACTCAAAGCATTCCCTaGTGTGTTTTGAGAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: CQNLCSKQLSFLGLVIIITQSIP*CVLRIS Trigger: ACTGATTCTCAAAACACAGCAGGGAATGCTTTGAGT...TATTATTATTACAAGTCCAAGAAAGGACAGTTGCTTAGAGCACAGATTTTGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170422.4 |
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| CDS TCA 90 bp | GGTCTCCAGCGCACTGAGACGGCTTCTTGTGACCCACGGCAGGAGTaGCAAGGTTTGTGTTATTGTCACTCGGATGTCTGCTGGAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GLQRTETASCDPRQE*QGLCYCHSDVCWSH Trigger: ATGGCTCCAGCAGACATCCGAGTGACAATAACACAAACCTTGTCACTCCTGCCGTGGGTCACAAGAAGCCGTCTCAGTGCGCTGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| CDS-3UTR CAA 90 bp | GGGGAGGTGGCAGGGCCAGATCTGCATCATCTGAAGACACGGCTGTACCAACTGACAGGTGTGTGTAGTTaGGTCTTGTTCCAGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: GEVAGPDLHHLKTRLYQLTGVCS*VLFQKT Trigger: CGTCTTCTGGAACAAGACCAAACTACACACACCTGT...CAGTTGGTACAGCCGTGTCTTCAGATGATGCAGATCTGGCCCTGCCACCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| CDS-3UTR CAA 90 bp | GGCTTCCTCAAGTATTTCCACAGTATAATCATGAGTATAGCTACCAACATAGAAACGAGGCCCACACTGTaGTCATCAGGAAAACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GFLKYFHSIIMSIATNIETRPTL*SSGKQD Trigger: ATCTTGTTTTCCTGATGACAACAGTGTGGGCCTCGT...TTCTATGTTGGTAGCTATACTCATGATTATACTGTGGAAATACTTGAGGAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| CDS CCA 72 bp | GGCAGTGACACTGCTAGCCCACAGGTGTGTGTAGTTTaGTCTTGTTCCAGAAGACGACGAGGCCCACACTGT | + |
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Preference number: 6 (lower is better) Translates to: GSDTASPQVCVV*SCSRRRRGPHC Trigger: ACAGTGTGGGCCTCGTCGTCTTCTGGAACAAGACCAAACTACACACACCTGTGGGCTAGCAGTGTCACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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| CDS TCA 72 bp | CGCACTGAGACGGCTTCTTGTGACCCACGGCAGGAGTaGCAAGGTTTGTGTTATTGTCACTCGGATGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RTETASCDPRQE*QGLCYCHSDVC Trigger: GCAGACATCCGAGTGACAATAACACAAACCTTGTCACTCCTGCCGTGGGTCACAAGAAGCCGTCTCAGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093983.11 |
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