Pregenerated sensors for EVA1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039903Ensembl transcript IDs: ENSMUST00000037539.15, ENSMUST00000099543.10, ENSMUST00000099548.10, ENSMUST00000130868.8, ENSMUST00000152223.3, ENSMUST00000154180.2, ENSMUST00000231280.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCCTCGCTGTCCTCCTCCGCCTTGTCGCTCCCTAGCACCAGGTaGTCCCTCCCCTGCCTCAGCTCCCGGAAGTCCTTCGTACAGGAC | + |
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Preference number: 1 (lower is better) Translates to: SSSLSSSALSLPSTR*SLPCLSSRKSFVQD Trigger: GTCCTGTACGAAGGACTTCCGGGAGCTGAGGCAGGGGAGGGAGCACCTGGTGCTAGGGAGCGACAAGGCGGAGGAGGACAGCGAGGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR TCA 90 bp | TGGGGAGTGAGGAATCCAGGCCACTGTTCATCCATATCTCTTGAATaGCTTGCTCCCTGCGTTCAATCCTTTCCGCCAGCTCGGCGGCTT | + |
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Preference number: 1 (lower is better) Translates to: WGVRNPGHCSSISLE*LAPCVQSFPPARRL Trigger: AAGCCGCCGAGCTGGCGGAAAGGATTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGATGAACAGTGGCCTGGATTCCTCACTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR TCA 90 bp | TTCCTGGGGAGTGAGGAATCCAGGCCACTGTTCATCCATATCTCTTaGATGACTTGCTCCCTGCGTTCAATCCTTTCCGCCAGCTCGGCG | + |
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Preference number: 1 (lower is better) Translates to: FLGSEESRPLFIHIS*MTCSLRSILSASSA Trigger: CGCCGAGCTGGCGGAAAGGATTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGATGAACAGTGGCCTGGATTCCTCACTCCCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR GCA 90 bp | GCTGGATATGAAGTCCTACAAAACCTGGACAACTCCTCGGGAAACTaGGAATCCGAGGAGTCCTCCTCTTCCAAGTCTTCCTCGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: AGYEVLQNLDNSSGN*ESEESSSSKSSSLS Trigger: GGACAGCGAGGAAGACTTGGAAGAGGAGGACTCCTCGGATTCGCAGTTTCCCGAGGAGTTGTCCAGGTTTTGTAGGACTTCATATCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR CCA 90 bp | GACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTaGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCAGAGAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: DRFSFTEGTSGTGEG*GDSAFWTLPSSESL Trigger: CAGACTCTCTGAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR CCA 90 bp | CGGATGACAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTaGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: RMTRQILLHRRYKWN*RGLGRQRILDPSFF Trigger: GAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTGTCATCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR CCA 90 bp | TCTCCTCCAGATGCCTCTGTTGTCAGTAGAAGTGGCCGACGTTCCTaGGGAGTGAGGAATCCAGGCCACTGTTCATCCATATCTCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: SPPDASVVSRSGRRS*GVRNPGHCSSISLE Trigger: TTCAAGAGATATGGATGAACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTCGGCCACTTCTACTGACAACAGAGGCATCTGGAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR CCA 90 bp | AATTATCGACGAGGACCTTACATCTCTGCTTCCCATAGCACCTCCTaGACAGGACTTGTAAAGCCGTGTAAGACAGGCAGTCGAAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: NYRRGPYISASHSTS*TGLVKPCKTGSRRG Trigger: CCCCCTTCGACTGCCTGTCTTACACGGCTTTACAAGTCCTGTCCAGGAGGTGCTATGGGAAGCAGAGATGTAAGGTCCTCGTCGATAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152223.3 |
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| 3UTR TCA 90 bp | CAGATGCCTCTGTTGTCAGTAGAAGTGGCCGACGTTCCTGGGGAGTaGGGAATCCAGGCCACTGTTCATCCATATCTCTTGAATGACTTG | + |
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Preference number: 1 (lower is better) Translates to: QMPLLSVEVADVPGE*GIQATVHPYLLNDL Trigger: CAAGTCATTCAAGAGATATGGATGAACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTCGGCCACTTCTACTGACAACAGAGGCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR GCA 90 bp | AGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGGTGTaGTGTAAACAGTGCGACGTCCCTTTGACAGCTTTCTGGCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: RIARHHGFLPIYSRV*CKQCDVPLTAFWLH Trigger: GTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGTTTACAGCACACCCTGGAATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR CCA 90 bp | TCCAGGGTGTGCTGTAAACAGTGCGACGTCCCTTTGACAGCTTTCTaGCTTCACCCATCTCGGATGACAAGACAGATTCTCCTTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: SRVCCKQCDVPLTAF*LHPSRMTRQILLHR Trigger: TCTGTGAAGGAGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGTTTACAGCACACCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR CCA 90 bp | GTTGCTGACGATAACGCCATCTTTCCGCACAACCCTCGACCCGCTTaGGTTGAATGTTATACCGTGTTCATCATCTTTCTTCAGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VADDNAIFPHNPRPA*VECYTVFIIFLQRR Trigger: CCTTCTCTGAAGAAAGATGATGAACACGGTATAACATTCAACCCAAGCGGGTCGAGGGTTGTGCGGAAAGATGGCGTTATCGTCAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR CCA 90 bp | AACTCCTGGTTTTCACACACTGTCTTGTTTTTCAACTCATTAGGTTaGCATTTAAAGGAGACCAGGAGGTATTTACTGCTTCCTGGACAA | + |
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Preference number: 1 (lower is better) Translates to: NSWFSHTVLFFNSLG*HLKETRRYLLLPGQ Trigger: TTGTCCAGGAAGCAGTAAATACCTCCTGGTCTCCTTTAAATGCCAACCTAATGAGTTGAAAAACAAGACAGTGTGTGAAAACCAGGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCAGCTCCCGGAAGTCCTTCGTACAGGACACCCTGATGACCAGGGCACACCTCCCTAGCACCAGGTaGTCCCTCCCCTGCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: CLSSRKSFVQDTLMTRAHLPSTR*SLPCLS Trigger: GCTGAGGCAGGGGAGGGAGCACCTGGTGCTAGGGAG...GTGTGCCCTGGTCATCAGGGTGTCCTGTACGAAGGACTTCCGGGAGCTGAGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR TCA 90 bp | GTGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACACCAGGGCACACAGTGTaGGGAGCAGGCCGATGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VRRPFDSFLASPISDDKTPGHTV*GAGRCR Trigger: TCTGCATCGGCCTGCTCCTCACACTGTGTGCCCTGG...TGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR TCA 90 bp | CCGATGCAGACACTGGACATGAACAGCAGAGCGGCTCTCTCTGGGTGGGCTCGACTTCTTCAGAGAGTCTaGTCTCCTCCAGATGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PMQTLDMNSRAALSGWARLLQRV*SPPDAS Trigger: AGAGGCATCTGGAGGAGATCAGACTCTCTGAAGAAG...TCGAGCCCACCCAGAGAGAGCCGCTCTGCTGTTCATGTCCAGTGTCTGCATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR TCA 90 bp | TCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGATCACCTTTCACCCACTaGCCCATCTCACCGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SQKVQVELERAGETAHSGSPFTH*PISPLP Trigger: GGGAAGCGGTGAGATGGGTCAGTGGGTGAAAGGTGA...TCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTAGCACTCACCTTTCACCCACTGACCCATCTCACCGCTTCCCACCAGCACACAGAAGGTACAAGTaGAACTGGAGAGGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LASTHLSPTDPSHRFPPAHRRYK*NWRGLG Trigger: CCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTG...TGCTGGTGGGAAGCGGTGAGATGGGTCAGTGGGTGAAAGGTGAGTGCTAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCAGCTCCCGGAAGTCCTTCGTACAGGACACCCTGATGACCAGGGCACACCCTTTGACAGCTTTCTaGCTTCACCCATCTCGGATG | + |
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Preference number: 2 (lower is better) Translates to: CLSSRKSFVQDTLMTRAHPLTAF*LHPSRM Trigger: CATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGG...GTGTGCCCTGGTCATCAGGGTGTCCTGTACGAAGGACTTCCGGGAGCTGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCTAGCACTCACCTTTCACCCACTGACCCATCTCACCGCTTCCCACCAGCATAGGTACAAGTGGAACTaGAGAGGGCTGGGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LLALTFHPLTHLTASHQHRYKWN*RGLGRQ Trigger: CTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT...ATGCTGGTGGGAAGCGGTGAGATGGGTCAGTGGGTGAAAGGTGAGTGCTAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTAGCACTCACCTTTCACCCACTGACCCATCTCACCGCTTCCCACCAGCACTTCTTCAGAGAGTCTaGTCTCCTCCAGATGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LASTHLSPTDPSHRFPPALLQRV*SPPDAS Trigger: AGAGGCATCTGGAGGAGATCAGACTCTCTGAAGAAG...TGCTGGTGGGAAGCGGTGAGATGGGTCAGTGGGTGAAAGGTGAGTGCTAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | GACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTGGAACTGGAGAGGGCTaGGGAGACAGCGCATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: DVPLTAFWLHPSRMTRQIGTGEG*GDSAFW Trigger: CCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCC...AATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGAGGTACAAGTGGAACTaGAGAGGGCTGGGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: TVRRPFDSFLASPISDDKRYKWN*RGLGRQ Trigger: CTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT...CTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCACTTCTTCAGAGAGTCTaGTCTCCTCCAGATGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: FSFTEGTSGTGEGWGDSALLQRV*SPPDAS Trigger: AGAGGCATCTGGAGGAGATCAGACTCTCTGAAGAAG...TGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAAGTGCGACGTCCCTTTaGCAGCTTTCTGGCTTCACC | + |
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Preference number: 2 (lower is better) Translates to: QDRFSFTEGTSGTGEGWGSATSL*QLSGFT Trigger: GGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACT...TCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | GTACAGATAGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGGTGTGGAACTGGAGAGGGCTaGGGAGACAGCGCATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: VQIGLQDTTASSQFIPGCGTGEG*GDSAFW Trigger: CCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCC...ACACCCTGGAATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGACACAGAAGGTACAAGTaGAACTGGAGAGGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QDRFSFTEGTSGTGEGWGHRRYK*NWRGLG Trigger: CCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTG...TCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGCTTCTTCAGAGAGTCTaGTCTCCTCCAGATGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TVRRPFDSFLASPISDDKLLQRV*SPPDAS Trigger: AGAGGCATCTGGAGGAGATCAGACTCTCTGAAGAAG...CTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTGCTATAGGCTGGATATaGAGTCCTACAAAACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RRYKWNWRGLGRQRILDPAIGWI*SPTKPG Trigger: TCCAGGTTTTGTAGGACTTCATATCCAGCCTATAGC...AGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR TCA 90 bp | GTACAGATAGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGGTGTGACGTTCCTGGGGAGTaGGGAATCCAGGCCACTGTT | + |
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Preference number: 2 (lower is better) Translates to: VQIGLQDTTASSQFIPGCDVPGE*GIQATV Trigger: AACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTC...ACACCCTGGAATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTCTCCACAGAAGGTACAAGTaGAACTGGAGAGGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VPLTAFWLHPSRMTRQILHRRYK*NWRGLG Trigger: CCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTG...GAGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCGGGAAACTGCGAATCCGAGGAGTCCTCCTCTTCCAAGTCTTCCTCGCTGGTATTTACTGCTTCCTaGACAAAGGTCAGGTCCGAA | + |
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Preference number: 2 (lower is better) Translates to: SSGNCESEESSSSKSSSLVFTAS*TKVRSE Trigger: TTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATAC...CAGCGAGGAAGACTTGGAAGAGGAGGACTCCTCGGATTCGCAGTTTCCCGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATGTATTTACTGCTTCCTaGACAAAGGTCAGGTCCGAA | + |
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Preference number: 2 (lower is better) Translates to: SPSQKVQVELERAGETAHVFTAS*TKVRSE Trigger: TTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATAC...ATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR-3UTR TCA 90 bp | ATATGTGCCCCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGCATAGTGCGACGTCCCTTTaGCAGCTTTCTGGCTTCACC | + |
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Preference number: 2 (lower is better) Translates to: ICAPPPFTQVTSIDDTWHSATSL*QLSGFT Trigger: GGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACT...ATGCCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGGGGCACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATAATTTTTAATGAATATATGTGCCCCTCCTCCATTTACTCAGGTCACAAGGGAACTGGAGAGGGCTaGGGAGACAGCGCATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SIIFNEYMCPSSIYSGHKGTGEG*GDSAFW Trigger: CCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCC...CTTGTGACCTGAGTAAATGGAGGAGGGGCACATATATTCATTAAAAATTATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGCATTGTAAATGTCTTCTTCAGAGAGTCTaGTCTCCTCCAGATGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PPPFTQVTSIDDTWHCKCLLQRV*SPPDAS Trigger: AGAGGCATCTGGAGGAGATCAGACTCTCTGAAGAAG...ACATTTACAATGCCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATAATTTTTAATGAATATATGTGCCCCTCCTCCATTTACTCAGGTCACAAGCACAGAAGGTACAAGTaGAACTGGAGAGGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SIIFNEYMCPSSIYSGHKHRRYK*NWRGLG Trigger: CCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTG...CTTGTGACCTGAGTAAATGGAGGAGGGGCACATATATTCATTAAAAATTATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| 3UTR-3UTR GCA 90 bp | ATTATTAATGTACAGATAGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGAGGTATTTACTaGTTCCTGGACAAAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: IINVQIGLQDTTASSQFIPGGIY*FLDKGQ Trigger: CTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGG...AATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTACATTAATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR CCA 72 bp | GCAGACACTGGACATGAACAGCAGAGCGGCTCTCTCTaGGTGGGCTCGAATGTAAGCGAACGCGGCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: ADTGHEQQSGSL*VGSNVSERGQR Trigger: TCTCTGGCCGCGTTCGCTTACATTCGAGCCCACCCAGAGAGAGCCGCTCTGCTGTTCATGTCCAGTGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| 3UTR CCA 72 bp | TGCTTCCCTCCATCCACACTGTGGAGTGAACTTAGGTaGCCAGCCTTGCTAGCACTCACCTTTCACCCACTG | + |
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Preference number: 3 (lower is better) Translates to: CFPPSTLWSELR*PALLALTFHPL Trigger: CAGTGGGTGAAAGGTGAGTGCTAGCAAGGCTGGCCACCTAAGTTCACTCCACAGTGTGGATGGAGGGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130868.8 |
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| 3UTR CCA 72 bp | TCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTaGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFTEGTSGTGEG*GDSAFWTLPSS Trigger: TGAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| 3UTR CCA 72 bp | AGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTaGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RQILLHRRYKWN*RGLGRQRILDP Trigger: AGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| 3UTR CCA 72 bp | GATGCCTCTGTTGTCAGTAGAAGTGGCCGACGTTCCTaGGGAGTGAGGAATCCAGGCCACTGTTCATCCATA | + |
|
Preference number: 3 (lower is better) Translates to: DASVVSRSGRRS*GVRNPGHCSSI Trigger: TATGGATGAACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTCGGCCACTTCTACTGACAACAGAGGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTGTTCATCCATATCTCTaGAATGACTTGCTCCCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: RRYKWNWRGLGRQRILDPVHPYL*NDLLPA Trigger: CGCAGGGAGCAAGTCATTCAAGAGATATGGATGAAC...AGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR TCA 72 bp | CTGTTGTCAGTAGAAGTGGCCGACGTTCCTGGGGAGTaGGGAATCCAGGCCACTGTTCATCCATATCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSVEVADVPGE*GIQATVHPYLL Trigger: CAAGAGATATGGATGAACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTCGGCCACTTCTACTGACAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR GCA 72 bp | GAAGTCCTACAAAACCTGGACAACTCCTCGGGAAACTaGGAATCCGAGGAGTCCTCCTCTTCCAAGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EVLQNLDNSSGN*ESEESSSSKSS Trigger: GGAAGACTTGGAAGAGGAGGACTCCTCGGATTCGCAGTTTCCCGAGGAGTTGTCCAGGTTTTGTAGGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR CCA 72 bp | CGAGGACCTTACATCTCTGCTTCCCATAGCACCTCCTaGACAGGACTTGTAAAGCCGTGTAAGACAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGPYISASHSTS*TGLVKPCKTGS Trigger: ACTGCCTGTCTTACACGGCTTTACAAGTCCTGTCCAGGAGGTGCTATGGGAAGCAGAGATGTAAGGTCCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152223.3 |
||
| 3UTR TCA 72 bp | CAGCTCGGCGGCTTCTATAGAGCTATAGGCTGGATATaGAGTCCTACAAAACCTGGACAACTCCTCGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLGGFYRAIGWI*SPTKPGQLLGK Trigger: TTTCCCGAGGAGTTGTCCAGGTTTTGTAGGACTTCATATCCAGCCTATAGCTCTATAGAAGCCGCCGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR TCA 72 bp | AGGAATCCAGGCCACTGTTCATCCATATCTCTTGAATaGCTTGCTCCCTGCGTTCAATCCTTTCCGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RNPGHCSSISLE*LAPCVQSFPPA Trigger: AGCTGGCGGAAAGGATTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGATGAACAGTGGCCTGGATTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR TCA 72 bp | AGTGAGGAATCCAGGCCACTGTTCATCCATATCTCTTaGATGACTTGCTCCCTGCGTTCAATCCTTTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SEESRPLFIHIS*MTCSLRSILSA Trigger: GGCGGAAAGGATTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGATGAACAGTGGCCTGGATTCCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR GCA 72 bp | TTCCTCCCAATTTATTCCAGGGTGTGCTGTAAACAGTaGGACGTCCCTTTGACAGCTTTCTGGCTTCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLPIYSRVCCKQ*DVPLTAFWLHP Trigger: TGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGTTTACAGCACACCCTGGAATAAATTGGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| 3UTR CCA 72 bp | TGCTGTAAACAGTGCGACGTCCCTTTGACAGCTTTCTaGCTTCACCCATCTCGGATGACAAGACAGATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CCKQCDVPLTAF*LHPSRMTRQIL Trigger: GAGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGTTTACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACACTCCCAGGCCATTTGTGGATTTTATGATCATGCACCACTATTACCCCTTGGCAGCTTGAAGGAGTaGCTTCCCTCCATCCACACT | + |
|
Preference number: 3 (lower is better) Translates to: LHSQAICGFYDHAPLLPLGSLKE*LPSIHT Trigger: AGTGTGGATGGAGGGAAGCAACTCCTTCAAGCTGCC...AAGGGGTAATAGTGGTGCATGATCATAAAATCCACAAATGGCCTGGGAGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130868.8 |
||
| 3UTR CCA 72 bp | GATAACGCCATCTTTCCGCACAACCCTCGACCCGCTTaGGTTGAATGTTATACCGTGTTCATCATCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DNAIFPHNPRPA*VECYTVFIIFL Trigger: AAGAAAGATGATGAACACGGTATAACATTCAACCCAAGCGGGTCGAGGGTTGTGCGGAAAGATGGCGTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| 3UTR TCA 72 bp | GCTTTCTCTACACTCCCAGGCCATTTGTGGATTTTATaGTCATGCACCACTATTACCCCTTGCTTAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AFSTLPGHLWIL*SCTTITPCLGF Trigger: AAAACCTAAGCAAGGGGTAATAGTGGTGCATGATCATAAAATCCACAAATGGCCTGGGAGTGTAGAGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130868.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCAGAGAGTCTGATCCGATTGGGGCGCGGGTaGTGGACGCGGGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGWGDSAFWTLPSSESLIRLGRG*WTRVSW Trigger: CCAGGACACCCGCGTCCACCACCCGCGCCCCAATCG...GATCAGACTCTCTGAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | AGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCGAGGCTCTACCTGCCTaGGGAGGCCCTGATTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RYKWNWRGLGRQRILDPSEALPA*GGPDSA Trigger: CGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTC...GGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCAACAGGCGCAGAAGCTaGCCCGGAGGCTCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKVQVELERAGETAHSGPNRRRS*PGGSTC Trigger: GCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTT...GGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCTCCCTAGCACCAGGTaGTCCCTCCCCTGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVELERAGETAHSGPFLLLPSTR*SLPCLS Trigger: GCTGAGGCAGGGGAGGGAGCACCTGGTGCTAGGGAG...AAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCCAGGCCCGCTGGTTCTaGCACTCGTCCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYKWNWRGLGRQRILDPSQARWF*HSSSTF Trigger: GAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTG...GGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCAGGTGGCAGGCCCGCTaGTTCTGGCACTCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEGTSGTGEGWGDSAFWTRWQAR*FWHSSS Trigger: GCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCT...GGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCGAAGACTCGGCTATTaGCCAGGAGGTGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVELERAGETAHSGPFLLRRLGY*PGGGRP Trigger: GGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCG...AAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR GCA 90 bp | GAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCAGAGAGTCTGATCGAGGCTCTACCTGCCTaGGGAGGCCCTGATTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGWGDSAFWTLPSSESLIEALPA*GGPDSA Trigger: CGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTC...GATCAGACTCTCTGAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTAACAGGCGCAGAAGCTaGCCCGGAGGCTCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVELERAGETAHSGPFLLNRRRS*PGGSTC Trigger: GCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTT...AAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCAACAGGCGCAGAAGCTaGCCCGGAGGCTCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEGTSGTGEGWGDSAFWTNRRRS*PGGSTC Trigger: GCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTT...GGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGACGATTGGGGCGCGGGTaGTGGACGCGGGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDRFSFTEGTSGTGEGWGRLGRG*WTRVSW Trigger: CCAGGACACCCGCGTCCACCACCCGCGCCCCAATCG...TCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | CGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATCGATTGGGGCGCGGGTaGTGGACGCGGGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFDSFLASPISDDKTDRLGRG*WTRVSW Trigger: CCAGGACACCCGCGTCCACCACCCGCGCCCCAATCG...ATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCAGGCCCGCTGGTTCTaGCACTCGTCCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVELERAGETAHSGPFLLQARWF*HSSSTF Trigger: GAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTG...AAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATCCAGGGCACACAGTGTaGGGAGCAGGCCGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSQKVQVELERAGETAHPGHTV*GAGRCR Trigger: TCTGCATCGGCCTGCTCCTCACACTGTGTGCCCTGG...ATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCAACAGGCGCAGAAGCTaGCCCGGAGGCTCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFTEGTSGTGEGWGDSAFNRRRS*PGGSTC Trigger: GCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTT...GAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | GTGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAAGGTGCTCCCTCCCCTaGCTCAGCTCCCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRRPFDSFLASPISDDKTRCSLP*LSSRKS Trigger: GGACTTCCGGGAGCTGAGGCAGGGGAGGGAGCACCT...TGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | TGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGAGGTGCTCCCTCCCCTaGCTCAGCTCCCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CDVPLTAFWLHPSRMTRQRCSLP*LSSRKS Trigger: GGACTTCCGGGAGCTGAGGCAGGGGAGGGAGCACCT...CTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGAGGTGCTCCCTCCCCTaGCTCAGCTCCCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVRRPFDSFLASPISDDKRCSLP*LSSRKS Trigger: GGACTTCCGGGAGCTGAGGCAGGGGAGGGAGCACCT...CTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | CAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCTCCCTAGCACCAGGTaGTCCCTCCCCTGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QILLHRRYKWNWRGLGRQLPSTR*SLPCLS Trigger: GCTGAGGCAGGGGAGGGAGCACCTGGTGCTAGGGAG...CTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | TGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGCTCCCTAGCACCAGGTaGTCCCTCCCCTGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CDVPLTAFWLHPSRMTRQLPSTR*SLPCLS Trigger: GCTGAGGCAGGGGAGGGAGCACCTGGTGCTAGGGAG...CTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTGCGCGGAGGTCTCTTTaGAGCACACTAGGACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRYKWNWRGLGRQRILDPARRSL*STLGPC Trigger: GCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGC...AGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCAGAGAGTCTGATCTCCGCGCGGAGGTCTCTTTaGAGCACACTAGGACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GWGDSAFWTLPSSESLISARRSL*STLGPC Trigger: GCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGC...GGAGATCAGACTCTCTGAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTCAGGCCCGCTGGTTCTaGCACTCGTCCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSQKVQVELERAGETAHSQARWF*HSSSTF Trigger: GAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTG...AGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR CCA 90 bp | GACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGGTGGCAGGCCCGCTaGTTCTGGCACTCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRFSFTEGTSGTGEGWGDRWQAR*FWHSSS Trigger: GCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCT...GTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGTGTGCTGTAAACAGTGCGACGTCCCTTTGACAGCTTTCTGGCTTCACAGGTGGCAGGCCCGCTaGTTCTGGCACTCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVCCKQCDVPLTAFWLHRWQAR*FWHSSS Trigger: GCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCT...GTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCACTGTTTACAGCACACCCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR TCA 90 bp | GACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACCGAAGACTCGGCTATTaGCCAGGAGGTGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRFSFTEGTSGTGEGWGDRRLGY*PGGGRP Trigger: GGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCG...GTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTGACGTTCCTGGGGAGTaGGGAATCCAGGCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVELERAGETAHSGPFLLDVPGE*GIQATV Trigger: AACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTC...AAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | GACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAACAGGCGCAGAAGCTaGCCCGGAGGCTCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRFSFTEGTSGTGEGWGDNRRRS*PGGSTC Trigger: GCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTT...GTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | TGTACAGATAGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGGTGCGATTGGGGCGCGGGTaGTGGACGCGGGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTDRIARHHGFLPIYSRVRLGRG*WTRVSW Trigger: CCAGGACACCCGCGTCCACCACCCGCGCCCCAATCG...CACCCTGGAATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCAGCGCGGAGGTCTCTTTaGAGCACACTAGGACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFTEGTSGTGEGWGDSAARRSL*STLGPC Trigger: GCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGC...TGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCGCGCGGAGGTCTCTTTaGAGCACACTAGGACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFTEGTSGTGEGWGDSAFARRSL*STLGPC Trigger: GCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGC...GAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAAGGTGGCAGGCCCGCTaGTTCTGGCACTCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDSPSQKVQVELERAGETRWQAR*FWHSSS Trigger: GCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCT...TGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR GCA 90 bp | CGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATGAGGCTCTACCTGCCTaGGGAGGCCCTGATTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFDSFLASPISDDKTDEALPA*GGPDSA Trigger: CGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTC...ATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCGCACCTTCTGCAAAGTaGTGGATGCCACACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RYKWNWRGLGRQRILDPSAPSAK*WMPHRS Trigger: TGACCTGTGTGGCATCCACCACTTTGCAGAAGGTGC...GGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGACAGGCCCGCTGGTTCTaGCACTCGTCCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDRFSFTEGTSGTGEGWGQARWF*HSSSTF Trigger: GAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTG...TCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR CCA 90 bp | CGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATCAGGCCCGCTGGTTCTaGCACTCGTCCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRPFDSFLASPISDDKTDQARWF*HSSSTF Trigger: GAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTG...ATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR GCA 90 bp | CCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTCTCCTTAGGTGCTCCCTCCCCTaGCTCAGCTCCCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTAFWLHPSRMTRQILLRCSLP*LSSRKS Trigger: GGACTTCCGGGAGCTGAGGCAGGGGAGGGAGCACCT...AAGGAGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | GTACAGATAGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGGTGTCTCCCTAGCACCAGGTaGTCCCTCCCCTGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQIGLQDTTASSQFIPGCLPSTR*SLPCLS Trigger: GCTGAGGCAGGGGAGGGAGCACCTGGTGCTAGGGAG...ACACCCTGGAATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037539.15 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCCTTCTGCAAAGTGGTaGATGCCACACAGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TEGTSGTGEGWGDSAFWTPSAKW*MPHRSG Trigger: ACCTGACCTGTGTGGCATCCACCACTTTGCAGAAGG...GGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCCATAGCACCTCCTaGACAGGACTTGTAAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRYKWNWRGLGRQRILDPSHSTS*TGLVKP Trigger: CGGCTTTACAAGTCCTGTCCAGGAGGTGCTATGGGA...AGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR TCA 90 bp | GTACAGATAGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGGTGTCCAGGGCACACAGTGTaGGGAGCAGGCCGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQIGLQDTTASSQFIPGCPGHTV*GAGRCR Trigger: TCTGCATCGGCCTGCTCCTCACACTGTGTGCCCTGG...ACACCCTGGAATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037539.15 ENSMUST00000231280.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGACGTTCCTGGGGAGTaGGGAATCCAGGCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDSPSQKVQVELERAGETDVPGE*GIQATV Trigger: AACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTC...TGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTCTCCTTGAGGCTCTACCTGCCTaGGGAGGCCCTGATTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLTAFWLHPSRMTRQILLEALPA*GGPDSA Trigger: CGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTC...AAGGAGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | GTACAGATAGGATTGCAAGACACCACGGCTTCCTCCCAATTTATTCCAGGGTGTGAGGCTCTACCTGCCTaGGGAGGCCCTGATTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VQIGLQDTTASSQFIPGCEALPA*GGPDSA Trigger: CGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTC...ACACCCTGGAATAAATTGGGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCGTCCAGCACCTTCTaGAAAGTGGTGGATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPSQKVQVELERAGETAHSSSTF*KVVDAT Trigger: TGTGGCATCCACCACTTTGCAGAAGGTGCTGGACGA...ATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGCATTGTAAATGTCGATTGGGGCGCGGGTaGTGGACGCGGGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPFTQVTSIDDTWHCKCRLGRG*WTRVSW Trigger: CCAGGACACCCGCGTCCACCACCCGCGCCCCAATCG...ACATTTACAATGCCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | CGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTCTGCGCGGAGGTCTCTTTaGAGCACACTAGGACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFDSFLASPISDDKTDSARRSL*STLGPC Trigger: GCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGC...AGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCCCTTCTGCAAAGTGGTaGATGCCACACAGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLHRRYKWNWRGLGRQRPSAKW*MPHRSG Trigger: ACCTGACCTGTGTGGCATCCACCACTTTGCAGAAGG...GCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | CTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGCCTTCTGCAAAGTGGTaGATGCCACACAGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHRRYKWNWRGLGRQRILPSAKW*MPHRSG Trigger: ACCTGACCTGTGTGGCATCCACCACTTTGCAGAAGG...CAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | CTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGCACCTTCTGCAAAGTaGTGGATGCCACACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRRYKWNWRGLGRQRILAPSAK*WMPHRS Trigger: TGACCTGTGTGGCATCCACCACTTTGCAGAAGGTGC...CAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR TCA 90 bp | AGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTCCATATCTCTTGAATaGCTTGCTCCCTGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RYKWNWRGLGRQRILDPSSISLE*LAPCVQ Trigger: TTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGA...GGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR TCA 90 bp | AGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCATCCATATCTCTTaGATGACTTGCTCCCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RYKWNWRGLGRQRILDPSFIHIS*MTCSLR Trigger: ACGCAGGGAGCAAGTCATTCAAGAGATATGGATGAA...GGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | TGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGTCGTCCAGCACCTTCTaGAAAGTGGTGGATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CDVPLTAFWLHPSRMTRQSSSTF*KVVDAT Trigger: TGTGGCATCCACCACTTTGCAGAAGGTGCTGGACGA...CTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCCAGGAGGTATTTACTaGTTCCTGGACAAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVELERAGETAHSGPFLLPGGIY*FLDKGQ Trigger: CTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGG...AAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | CAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGGCACCTTCTGCAAAGTaGTGGATGCCACACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QILLHRRYKWNWRGLGRQAPSAK*WMPHRS Trigger: TGACCTGTGTGGCATCCACCACTTTGCAGAAGGTGC...CTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | GTGCGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACATCCCATAGCACCTCCTaGACAGGACTTGTAAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VRRPFDSFLASPISDDKTSHSTS*TGLVKP Trigger: CGGCTTTACAAGTCCTGTCCAGGAGGTGCTATGGGA...TGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| 3UTR CAA 72 bp | ATCCAGGCCACTGTTCATCCATATCTCTTGAATGACTaGCTCCCTGCGTTCAATCCTTTCCGCCAGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQATVHPYLLND*LPAFNPFRQLG Trigger: GCCGAGCTGGCGGAAAGGATTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGATGAACAGTGGCCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130868.8 ENSMUST00000152223.3 |
||
| CDS-3UTR TCA 90 bp | GTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTTCCATATCTCTTGAATaGCTTGCTCCCTGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQVELERAGETAHSGPFLSISLE*LAPCVQ Trigger: TTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGA...AAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCAGGAGGTATTTACTaGTTCCTGGACAAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQKVQVELERAGETAHSGPGGIY*FLDKGQ Trigger: CTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGG...TCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCAGAGAGTCTGATCGTATTTACTGCTTCCTaGACAAAGGTCAGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGWGDSAFWTLPSSESLIVFTAS*TKVRSE Trigger: TTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATAC...GATCAGACTCTCTGAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGCATTGTAAATGTCGAAGACTCGGCTATTaGCCAGGAGGTGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPFTQVTSIDDTWHCKCRRLGY*PGGGRP Trigger: GGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCG...ACATTTACAATGCCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037539.15 |
||
| CDS-3UTR TCA 90 bp | TTGCTAGCACTCACCTTTCACCCACTGACCCATCTCACCGCTTCCCACCAGCATGCTATAGGCTGGATATaGAGTCCTACAAAACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLALTFHPLTHLTASHQHAIGWI*SPTKPG Trigger: TCCAGGTTTTGTAGGACTTCATATCCAGCCTATAGC...ATGCTGGTGGGAAGCGGTGAGATGGGTCAGTGGGTGAAAGGTGAGTGCTAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037539.15 ENSMUST00000231280.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTAGCACTCACCTTTCACCCACTGACCCATCTCACCGCTTCCCACCAGCATTCCATATCTCTTGAATaGCTTGCTCCCTGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLALTFHPLTHLTASHQHSISLE*LAPCVQ Trigger: TTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGA...ATGCTGGTGGGAAGCGGTGAGATGGGTCAGTGGGTGAAAGGTGAGTGCTAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037539.15 ENSMUST00000231280.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCTTCTTCAGAGAGTCTGATTCCATATCTCTTGAATaGCTTGCTCCCTGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRQRILDPSFFRESDSISLE*LAPCVQ Trigger: TTGAACGCAGGGAGCAAGTCATTCAAGAGATATGGA...ATCAGACTCTCTGAAGAAGGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | GACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTTCGTCCAGCACCTTCTaGAAAGTGGTGGATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DVPLTAFWLHPSRMTRQISSSTF*KVVDAT Trigger: TGTGGCATCCACCACTTTGCAGAAGGTGCTGGACGA...AATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
||
| CDS-3UTR CCA 90 bp | CTGTATAGAATTATTAATGTACAGATAGGATTGCAAGACACCACGGCTTCCTCCAGGTGGCAGGCCCGCTaGTTCTGGCACTCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYRIINVQIGLQDTTASSRWQAR*FWHSSS Trigger: GCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCT...GGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTACATTAATAATTCTATACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 |
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| CDS-3UTR CCA 90 bp | ATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCGTATTTACTGCTTCCTaGACAAAGGTCAGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILLHRRYKWNWRGLGRQRVFTAS*TKVRSE Trigger: TTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATAC...GCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
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| CDS-3UTR CCA 90 bp | CGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTCTTCCCATAGCACCTCCTaGACAGGACTTGTAAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPFDSFLASPISDDKTDSSHSTS*TGLVKP Trigger: CGGCTTTACAAGTCCTGTCCAGGAGGTGCTATGGGA...AGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGGTTCTTGGGAACACATaGGTAGGCAACAGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRQILLHRRYKWNWRGLGVLGNT*VGNSEV Trigger: TACCTCACTGTTGCCTACGCATGTGTTCCCAAGAAC...CCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR GCA 90 bp | CAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGTTCTTGGGAACACATaGGTAGGCAACAGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QDRFSFTEGTSGTGEGWGVLGNT*VGNSEV Trigger: TACCTCACTGTTGCCTACGCATGTGTTCCCAAGAAC...TCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR CCA 90 bp | TTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGTGTAGCTTCAACTCCTaGTTTTCACACACTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTSGTGEGWGDSAFWCSFNS*FSHTVL Trigger: CAAGACAGTGTGTGAAAACCAGGAGTTGAAGCTACA...CCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR CCA 90 bp | TCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGATGTAGCTTCAACTCCTaGTTTTCACACACTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQKVQVELERAGETAHSGCSFNS*FSHTVL Trigger: CAAGACAGTGTGTGAAAACCAGGAGTTGAAGCTACA...TCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| 3UTR CAA 72 bp | TGTATCATGACACATGTTAGAAGGTCAGAGGGCAGCTaGAAGGAGTTGCTTCCCTCCATCCACACTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CIMTHVRRSEGS*KELLPSIHTVE Trigger: CTCCACAGTGTGGATGGAGGGAAGCAACTCCTTCAAGCTGCCCTCTGACCTTCTAACATGTGTCATGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130868.8 |
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| CDS-3UTR TCA 90 bp | CGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATGCTATAGGCTGGATATaGAGTCCTACAAAACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRPFDSFLASPISDDKTDAIGWI*SPTKPG Trigger: TCCAGGTTTTGTAGGACTTCATATCCAGCCTATAGC...ATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR TCA 90 bp | CGACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTTCATCCATATCTCTTaGATGACTTGCTCCCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRPFDSFLASPISDDKTDFIHIS*MTCSLR Trigger: ACGCAGGGAGCAAGTCATTCAAGAGATATGGATGAA...ATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR CCA 90 bp | GACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACTGTAGCTTCAACTCCTaGTTTTCACACACTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRFSFTEGTSGTGEGWGDCSFNS*FSHTVL Trigger: CAAGACAGTGTGTGAAAACCAGGAGTTGAAGCTACA...GTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
||
| CDS-3UTR TCA 90 bp | GACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTGCTATAGGCTGGATATaGAGTCCTACAAAACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DVPLTAFWLHPSRMTRQIAIGWI*SPTKPG Trigger: TCCAGGTTTTGTAGGACTTCATATCCAGCCTATAGC...AATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR TCA 90 bp | CTGTATAGAATTATTAATGTACAGATAGGATTGCAAGACACCACGGCTTCCTCCGACGTTCCTGGGGAGTaGGGAATCCAGGCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYRIINVQIGLQDTTASSDVPGE*GIQATV Trigger: AACAGTGGCCTGGATTCCTCACTCCCCAGGAACGTC...GGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTACATTAATAATTCTATACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037539.15 ENSMUST00000231280.2 |
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| CDS-3UTR CCA 90 bp | GACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTGTATTTACTGCTTCCTaGACAAAGGTCAGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DVPLTAFWLHPSRMTRQIVFTAS*TKVRSE Trigger: TTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATAC...AATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGCATTGTAAACCAGGAGGTATTTACTaGTTCCTGGACAAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: APPPFTQVTSIDDTWHCKPGGIY*FLDKGQ Trigger: CTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGG...TTTACAATGCCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037539.15 |
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| CDS-3UTR CCA 90 bp | GACGTCCCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTTGTAGCTTCAACTCCTaGTTTTCACACACTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DVPLTAFWLHPSRMTRQICSFNS*FSHTVL Trigger: CAAGACAGTGTGTGAAAACCAGGAGTTGAAGCTACA...AATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGGGACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR GCA 90 bp | AATATATGTGCCCCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGGTTCTTGGGAACACATaGGTAGGCAACAGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NICAPPPFTQVTSIDDTWVLGNT*VGNSEV Trigger: TACCTCACTGTTGCCTACGCATGTGTTCCCAAGAAC...CCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGGGGCACATATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037539.15 ENSMUST00000231280.2 |
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| CDS TCA 90 bp | AGGCGCAGAAGCTGCCCCGGAGGCTCTACCTGCCTGCGGAGGCCCTaGTTCTGCGCCGATTGGGGCGCGGGTGGTGGACGCGGGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRSCPGGSTCLRRP*FCADWGAGGGRGCP Trigger: AGGACACCCGCGTCCACCACCCGCGCCCCAATCGGCGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS GCA 90 bp | TGCAGTAGAACAGGCGCAGAAGCTGCCCCGGAGGCTCTACCTGCCTaGGGAGGCCCTGATTCTGCGCCGATTGGGGCGCGGGTGGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSRTGAEAAPEALPA*GGPDSAPIGARVVD Trigger: GTCCACCACCCGCGCCCCAATCGGCGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTTCTACTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS CCA 90 bp | CCGAAGACTCGGCTATTGACCAGGAGGTGGCAGGCCCGCTGGTTCTaGCACTCGTCCAGCACCTTCTGCAAAGTGGTGGATGCCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: PKTRLLTRRWQARWF*HSSSTFCKVVDATQ Trigger: CTGTGTGGCATCCACCACTTTGCAGAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
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| CDS CCA 90 bp | TCAGGTCCGAAGACTCGGCTATTGACCAGGAGGTGGCAGGCCCGCTaGTTCTGGCACTCGTCCAGCACCTTCTGCAAAGTGGTGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGPKTRLLTRRWQAR*FWHSSSTFCKVVDA Trigger: GGCATCCACCACTTTGCAGAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGGACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
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| CDS-3UTR CAA 90 bp | TTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGCCGAAGACTCGGCTATaGACCAGGAGGTGGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FTEGTSGTGEGWGDSAFWPKTRL*TRRWQA Trigger: GGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGG...CCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
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| CDS TCA 90 bp | ATTTACTGCTTCCTGGACAAAGGTCAGGTCCGAAGACTCGGCTATTaGCCAGGAGGTGGCAGGCCCGCTGGTTCTGGCACTCGTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IYCFLDKGQVRRLGY*PGGGRPAGSGTRPA Trigger: TGCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGGACCTGACCTTTGTCCAGGAAGCAGTAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
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| CDS-3UTR CAA 90 bp | TTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGAGCGCGGAGGTCTCTTaGGAGCACACTAGGACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FTEGTSGTGEGWGDSAFWSAEVS*EHTRTV Trigger: CACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCT...CCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCAGCGCGGAGGTCTCTTaGGAGCACACTAGGACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFTEGTSGTGEGWGDSAFSAEVS*EHTRTV Trigger: CACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCT...GAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS-3UTR CAA 90 bp | CAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCCGAAGACTCGGCTATaGACCAGGAGGTGGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QILLHRRYKWNWRGLGRQPKTRL*TRRWQA Trigger: GGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGG...CTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
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| CDS-3UTR CAA 90 bp | ACAAGACAGATTCTCCTTCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGCGCGGAGGTCTCTTaGGAGCACACTAGGACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRQILLHRRYKWNWRGLGSAEVS*EHTRTV Trigger: CACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCT...CCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGAAGGAGAATCTGTCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS-3UTR CAA 90 bp | CCTTTGACAGCTTTCTGGCTTCACCCATCTCGGATGACAAGACAGATTCTCCTTCCGAAGACTCGGCTATaGACCAGGAGGTGGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLTAFWLHPSRMTRQILLPKTRL*TRRWQA Trigger: GGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGG...AAGGAGAATCTGTCTTGTCATCCGAGATGGGTGAAGCCAGAAAGCTGTCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 |
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| CDS-3UTR CAA 90 bp | AGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCCTTCCGTTCATCCATATCTCTaGAATGACTTGCTCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RYKWNWRGLGRQRILDPSVHPYL*NDLLPA Trigger: CGCAGGGAGCAAGTCATTCAAGAGATATGGATGAAC...GGAAGGGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGACCGTTCATCCATATCTCTaGAATGACTTGCTCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TEGTSGTGEGWGDSAFWTVHPYL*NDLLPA Trigger: CGCAGGGAGCAAGTCATTCAAGAGATATGGATGAAC...GGTCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS-3UTR CAA 90 bp | ATATGTGCCCCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGCATAGCGCGGAGGTCTCTTaGGAGCACACTAGGACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ICAPPPFTQVTSIDDTWHSAEVS*EHTRTV Trigger: CACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCT...ATGCCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGGGGCACATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS-3UTR CAA 90 bp | TCACAGAAGGTACAAGTGGAACTGGAGAGGGCTGGGGAGACAGCGCATTCTGGAGTTCATCCATATCTCTaGAATGACTTGCTCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SQKVQVELERAGETAHSGVHPYL*NDLLPA Trigger: CGCAGGGAGCAAGTCATTCAAGAGATATGGATGAAC...TCCAGAATGCGCTGTCTCCCCAGCCCTCTCCAGTTCCACTTGTACCTTCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000231280.2 |
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| CDS TCA 90 bp | GGTTTTCACACACTGTCTTGTTTTTCAACTCATCAGAGAAATCGGTaGGCGCGGAGGTCTCTTTGGAGCACACTAGGACCGTGCAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFHTLSCFSTHQRNR*ARRSLWSTLGPCSR Trigger: TCTACTGCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCTCACCGATTTCTCTGATGAGTTGAAAAACAAGACAGTGTGTGAAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231280.2 |
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| CDS CCA 90 bp | ATTAGGTTGGCATTTAAAGGAGACCAGGAGGTATTTACTGCTTCCTaGACAAAGGTCAGGTCCGAAGACTCGGCTATTGACCAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IRLAFKGDQEVFTAS*TKVRSEDSAIDQEV Trigger: CACCTCCTGGTCAATAGCCGAGTCTTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGGTCTCCTTTAAATGCCAACCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
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| CDS-3UTR CAA 90 bp | CTGTATAGAATTATTAATGTACAGATAGGATTGCAAGACACCACGGCTTCCTCCAGCGCGGAGGTCTCTTaGGAGCACACTAGGACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYRIINVQIGLQDTTASSSAEVS*EHTRTV Trigger: CACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCT...GGAGGAAGCCGTGGTGTCTTGCAATCCTATCTGTACATTAATAATTCTATACAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS-3UTR CAA 90 bp | TGTGCCCCTCCTCCATTTACTCAGGTCACAAGTATAGATGACACCTGGCATTGTGTTCATCCATATCTCTaGAATGACTTGCTCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CAPPPFTQVTSIDDTWHCVHPYL*NDLLPA Trigger: CGCAGGGAGCAAGTCATTCAAGAGATATGGATGAAC...ACAATGCCAGGTGTCATCTATACTTGTGACCTGAGTAAATGGAGGAGGGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037539.15 ENSMUST00000231280.2 |
||
| CDS-3UTR CAA 90 bp | AGCATAATTTTTAATGAATATATGTGCCCCTCCTCCATTTACTCAGGTCACAAGTTTTCACACACTGTCTaGTTTTTCAACTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIIFNEYMCPSSIYSGHKFSHTV*FFNSSE Trigger: CTCTGATGAGTTGAAAAACAAGACAGTGTGTGAAAA...CTTGTGACCTGAGTAAATGGAGGAGGGGCACATATATTCATTAAAAATTATGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000231280.2 |
||
| CDS TCA 72 bp | AGCTGCCCCGGAGGCTCTACCTGCCTGCGGAGGCCCTaGTTCTGCGCCGATTGGGGCGCGGGTGGTGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: SCPGGSTCLRRP*FCADWGAGGGR Trigger: GCGTCCACCACCCGCGCCCCAATCGGCGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTCCGGGGCAGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000130868.8 ENSMUST00000152223.3 ENSMUST00000231280.2 |
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| CDS CAA 72 bp | CTTCCTGGACAAAGGTCAGGTCCGAAGACTCGGCTATaGACCAGGAGGTGGCAGGCCCGCTGGTTCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPGQRSGPKTRL*TRRWQARWFWH Trigger: GTGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGGACCTGACCTTTGTCCAGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
||
| CDS TCA 72 bp | TTCCTGGACAAAGGTCAGGTCCGAAGACTCGGCTATTaGCCAGGAGGTGGCAGGCCCGCTGGTTCTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: FLDKGQVRRLGY*PGGGRPAGSGT Trigger: AGTGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGGACCTGACCTTTGTCCAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
||
| CDS CCA 72 bp | AAGACTCGGCTATTGACCAGGAGGTGGCAGGCCCGCTaGTTCTGGCACTCGTCCAGCACCTTCTGCAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KTRLLTRRWQAR*FWHSSSTFCKV Trigger: CACTTTGCAGAAGGTGCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
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| CDS CAA 90 bp | TATTTACTGCTTCCTGGACAAAGGTCAGGTCCGAAGACTCGGCTATaGACCAGGAGGTGGCAGGCCCGCTGGTTCTGGCACTCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: YLLLPGQRSGPKTRL*TRRWQARWFWHSSS Trigger: GCTGGACGAGTGCCAGAACCAGCGGGCCTGCCACCTCCTGGTCAATAGCCGAGTCTTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
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| CDS TCA 72 bp | ACACTGTCTTGTTTTTCAACTCATCAGAGAAATCGGTaGGCGCGGAGGTCTCTTTGGAGCACACTAGGACCG | + |
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Preference number: 6 (lower is better) Translates to: TLSCFSTHQRNR*ARRSLWSTLGP Trigger: CGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCTCACCGATTTCTCTGATGAGTTGAAAAACAAGACAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231280.2 |
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| CDS CCA 72 bp | GCATTTAAAGGAGACCAGGAGGTATTTACTGCTTCCTaGACAAAGGTCAGGTCCGAAGACTCGGCTATTGAC | + |
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Preference number: 6 (lower is better) Translates to: AFKGDQEVFTAS*TKVRSEDSAID Trigger: GTCAATAGCCGAGTCTTCGGACCTGACCTTTGTCCAGGAAGCAGTAAATACCTCCTGGTCTCCTTTAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037539.15 ENSMUST00000099543.10 ENSMUST00000099548.10 ENSMUST00000154180.2 |
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