Pregenerated sensors for ETV5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013089Ensembl transcript IDs: ENSMUST00000079601.13, ENSMUST00000168774.8, ENSMUST00000170393.2, ENSMUST00000170803.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTaGCGCGACTGTCCCATGTCCCTTGACTGGCACATGTGCCGTCAA | + |
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Preference number: 1 (lower is better) Translates to: GTALREVHESRGNAK*RDCPMSLDWHMCRQ Trigger: TTGACGGCACATGTGCCAGTCAAGGGACATGGGACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CCA 90 bp | ATGGGCGCTAACCCTGAACACACTGCAGTACTGCTCTGCACATACTaGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: MGANPEHTAVLLCTY*PWWQGGRYPRLPRK Trigger: CTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATGTGCAGAGCAGTACTGCAGTGTGTTCAGGGTTAGCGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CCA 90 bp | ACCCCTCGTTCCTGTGAACCTCCTTCACAAGTCATGAGAAGGCTGTaGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGT | + |
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Preference number: 1 (lower is better) Translates to: TPRSCEPPSQVMRRL*SVPRSVSSVSCPTR Trigger: ACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATGACTTGTGAAGGAGGTTCACAGGAACGAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR TCA 90 bp | AAACAAGCCGTCTGCGCTCAGCCGTGTGACTGGGAGGAAGGGACTTaGTTTACTTATGGTGACGGCTCGGCTGGAAGGAAGGCCAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: KQAVCAQPCDWEEGT*FTYGDGSAGRKAKE Trigger: CTCTTTGGCCTTCCTTCCAGCCGAGCCGTCACCATAAGTAAATCAAGTCCCTTCCTCCCAGTCACACGGCTGAGCGCAGACGGCTTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CCA 90 bp | GAGTGTCAAGGACAGCAAATTCCTGTCAATCAGGCAGCAAAGCACTaGCGTTTCCTGCTGACGTCCCCACCGCTCCAAACCCAATCTGTA | + |
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Preference number: 1 (lower is better) Translates to: ECQGQQIPVNQAAKH*RFLLTSPPLQTQSV Trigger: TACAGATTGGGTTTGGAGCGGTGGGGACGTCAGCAGGAAACGCCAGTGCTTTGCTGCCTGATTGACAGGAATTTGCTGTCCTTGACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR TCA 90 bp | AACAGCCAAGAACACAAACAAAACCACTGCCCTCGGTTGCCTGGATaGGGACTGCTAGCTCTAGGGTGTGGCTACTCGGCCATTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: NSQEHKQNHCPRLPG*GLLALGCGYSAIQK Trigger: TTTCTGAATGGCCGAGTAGCCACACCCTAGAGCTAGCAGTCCTCATCCAGGCAACCGAGGGCAGTGGTTTTGTTTGTGTTCTTGGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR GCA 90 bp | GGTCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTaGAGTTTCTTCCCAAAGAATTGTGCAAGTCAAAGCCTCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GLSLPDSALSTVLWV*SFFPKNCASQSLLC Trigger: ACACAGGAGGCTTTGACTTGCACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CCA 90 bp | CTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATaGGTGTGCAGTTTCTTCCCAAAGAATTGTGCAAGTCAAAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LNGLSLPDSALSTVL*VCSFFPKNCASQSL Trigger: GAGGCTTTGACTTGCACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CCA 90 bp | TCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATGTGTaGAGTGTCAAGGACAGCAAATTCCTGTCAATCAGGCAGCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: SVSSVSCPTREEHNV*SVKDSKFLSIRQQS Trigger: GCTTTGCTGCCTGATTGACAGGAATTTGCTGTCCTTGACACTCCACACATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR GCA 90 bp | TCTTCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTaGACGCGGCCCTTTGCAGGGGGAAGTAGTTCAAATCCACACTCT | + |
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Preference number: 1 (lower is better) Translates to: SSLLYTVQNIRSSAG*TRPFAGGSSSNPHS Trigger: AGAGTGTGGATTTGAACTACTTCCCCCTGCAAAGGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGCTGCGCTCAGCCGTGTaGCTGGGAGGAAGGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: EGCGVSHAQSALCPVPHVLRSAV*LGGRDL Trigger: CAAGTCCCTTCCTCCCAGTCACACGGCTGAGCGCAG...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGCCTCGGTTGCCTGGATaGGGACTGCTAGCTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: EGCGVSHAQSALCPVPHVPRLPG*GLLALG Trigger: CCCTAGAGCTAGCAGTCCTCATCCAGGCAACCGAGG...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCTGCTCTACCTGTGCGTaGCAGGTAAGTTTCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: RLCGRYMSPVGMQSGATVCSTCA*QVSFRP Trigger: GGGTCTGAAACTTACCTGTCACGCACAGGTAGAGCA...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGCTGCTCTGCACATACTaGCCATGGTGGCAAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: EGCGVSHAQSALCPVPHVLLCTY*PWWQGG Trigger: TCCTCCTTGCCACCATGGCCAGTATGTGCAGAGCAG...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCTGGGAGGAAGGGACTTaGTTTACTTATGGTGACGGC | + |
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Preference number: 2 (lower is better) Translates to: RLCGRYMSPVGMQSGATVWEEGT*FTYGDG Trigger: GCCGTCACCATAAGTAAATCAAGTCCCTTCCTCCCA...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR GCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACTGCAGTACTGCTCTaGACATACTGGCCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HEKAVECPTLSQLCVLSHTAVLL*TYWPWW Trigger: CCACCATGGCCAGTATGTGCAGAGCAGTACTGCAGT...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACGCTAGCTCTAGGGTGTaGCTACTCGGCCATTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: HEKAVECPTLSQLCVLSHASSRV*LLGHSE Trigger: TTCTGAATGGCCGAGTAGCCACACCCTAGAGCTAGC...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTGCTAGCTCTAGGGTGTaGCTACTCGGCCATTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGASSRV*LLGHSE Trigger: TTCTGAATGGCCGAGTAGCCACACCCTAGAGCTAGC...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CAA 90 bp | TGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTGGTTTTaGTCTCTCCCTGTTCCCACTCCTCCCGAGCCAAGGTATTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: WQGGRYPRLPRKWWF*SLPVPTPPEPRYLS Trigger: AGACAAATACCTTGGCTCGGGAGGAGTGGGAACAGGGAGAGACAAAAACCACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCATTCGGATTCTGCCTTCAGGAACGGGCGCTGATTGTCCGGGAAGGCCACAGCCACCTTCTGCATaGTGCCCTTTTCATAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: GGIRILPSGTGADCPGRPQPPSA*CPFHSN Trigger: ATTACTATGAAAAGGGCATCATGCAGAAGGTGGCTG...TGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
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| 3UTR-3UTR CCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCTTATCGACTGTCCTATaGGTGTGCAGTTTCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RLCGRYMSPVGMQSGATVLSTVL*VCSFFP Trigger: TGGGAAGAAACTGCACACCCATAGGACAGTCGATAA...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCGATCCCCTCGCAGGCTaGAGCATCTTCCAAAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPDPLAG*SIFQSR Trigger: CCTACTTTGGAAGATGCTGCAGCCTGCGAGGGGATC...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTACTGCAGTACTGCTCTaGACATACTGGCCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SEPPRLSLIDCPMGVQFLTAVLL*TYWPWW Trigger: CCACCATGGCCAGTATGTGCAGAGCAGTACTGCAGT...AAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACTTATCGACTGTCCTATaGGTGTGCAGTTTCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: HEKAVECPTLSQLCVLSHLSTVL*VCSFFP Trigger: TGGGAAGAAACTGCACACCCATAGGACAGTCGATAA...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTCCTCGGTTGCCTGGATaGGGACTGCTAGCTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: DSALSTVLWVCSFFPKNCPRLPG*GLLALG Trigger: CCCTAGAGCTAGCAGTCCTCATCCAGGCAACCGAGG...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR GCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACTGTAGTATGTACATCTaGTTCCCAGAGAAGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: HEKAVECPTLSQLCVLSHCSMYI*FPEKES Trigger: ACTCTCCTTCTCTGGGAAGCAGATGTACATACTACA...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCCTGCTCTGCACATACTaGCCATGGTGGCAAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: EFCNFKPQWSEPPRLSLILLCTY*PWWQGG Trigger: TCCTCCTTGCCACCATGGCCAGTATGTGCAGAGCAG...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGCATTTTAGTAGTCCATaGTCAACGCAGATTGTCATA | + |
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Preference number: 2 (lower is better) Translates to: EGCGVSHAQSALCPVPHVHFSSP*STQIVI Trigger: TATGACAATCTGCGTTGATCATGGACTACTAAAATG...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGCTGCCCTCGGTTGCCTaGATGAGGACTGCTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KRKSSRKPVMLASTALPVLPSVA*MRTASS Trigger: AGAGCTAGCAGTCCTCATCCAGGCAACCGAGGGCAG...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTCTGCCCTCGGTTGCCTaGATGAGGACTGCTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DSALSTVLWVCSFFPKNCLPSVA*MRTASS Trigger: AGAGCTAGCAGTCCTCATCCAGGCAACCGAGGGCAG...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CAA 90 bp | AGCCTCCTGTGTGAAGGCATTTTAGTAGTCCATGATCAACGCAGATaGTCATACACTCGGTCCCCTTTCATGGGCGCTAACCCTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: SLLCEGILVVHDQRR*SYTRSPFMGANPEH Trigger: GTGTTCAGGGTTAGCGCCCATGAAAGGGGACCGAGTGTATGACAATCTGCGTTGATCATGGACTACTAAAATGCCTTCACACAGGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATTACACAGCTTTAGTTTaGTTGTTTAGAACATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVPRSVSSVSCPTREEHNYTALV*LFRTSP Trigger: TGGGGATGTTCTAAACAACCAAACTAAAGCTGTGTA...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CAA 90 bp | CGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCTaGGGTTCTCCTGATAATACTCAAAGGGCAAGCTTTAGGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: RAKVFVLKGVESRDS*GSPDNTQRASFRNS Trigger: GCTGTTCCTAAAGCTTGCCCTTTGAGTATTATCAGGAGAACCCAAGCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCCTGGGTCCCCAGCAGGTGACCAGTCGTTAAATGGACATGACATGTATGTATGTAGTATGTACATCTaGTTCCCAGAGAAGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: MPGSPAGDQSLNGHDMYVCSMYI*FPEKES Trigger: ACTCTCCTTCTCTGGGAAGCAGATGTACATACTACA...TACATACATGTCATGTCCATTTAACGACTGGTCACCTGCTGGGGACCCAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGTCAAAGCCTCCTGTGTaGAGGCATTTTAGTAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KRKSSRKPVMLASTALPVSKPPV*RHFSSP Trigger: TGGACTACTAAAATGCCTTCACACAGGAGGCTTTGA...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CCA 90 bp | CGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGAATCCAGAGACAGCTTaGGTTCTCCTGATAATACTC | + |
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Preference number: 2 (lower is better) Translates to: RLSLIDCPMGVQFLPKELNPETA*VLLIIL Trigger: GAGTATTATCAGGAGAACCCAAGCTGTCTCTGGATT...CAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTCATTTTAGTAGTCCATaGTCAACGCAGATTGTCATA | + |
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Preference number: 2 (lower is better) Translates to: DSALSTVLWVCSFFPKNCHFSSP*STQIVI Trigger: TATGACAATCTGCGTTGATCATGGACTACTAAAATG...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR TCA 72 bp | AAGGCCAAAGAGGAACGCGGTCTGAGAGCCATGGAGTaGGTAACGGCTCTCCTGGCCTCCCCAGTTCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: KAKEERGLRAME*VTALLASPVLD Trigger: GTCCAGAACTGGGGAGGCCAGGAGAGCCGTTACTCACTCCATGGCTCTCAGACCGCGTTCCTCTTTGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR GCA 72 bp | CCCCTCGCAGGCTGCAGCATCTTCCAAAGTAGGCACTaGCCCACCCGAGGGATGCAGTGCAGGTACCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: PLAGCSIFQSRH*PTRGMQCRYQK Trigger: TTTTTGGTACCTGCACTGCATCCCTCGGGTGGGGCAGTGCCTACTTTGGAAGATGCTGCAGCCTGCGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CCA 72 bp | CTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTaGCGCGACTGTCCCATGTCCCTTGACTGGCACATG | + |
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Preference number: 3 (lower is better) Translates to: LREVHESRGNAK*RDCPMSLDWHM Trigger: CATGTGCCAGTCAAGGGACATGGGACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGATACGCCTCAACAGGTaGTCTGGTGCAGAAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: EGCGVSHAQSALCPVPHVIRLNR*SGAEST Trigger: AGTGCTTTCTGCACCAGACAACCTGTTGAGGCGTAT...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR TCA 72 bp | GAACACAAACAAAACCACTGCCCTCGGTTGCCTGGATaGGGACTGCTAGCTCTAGGGTGTGGCTACTCGGCC | + |
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Preference number: 3 (lower is better) Translates to: EHKQNHCPRLPG*GLLALGCGYSA Trigger: GGCCGAGTAGCCACACCCTAGAGCTAGCAGTCCTCATCCAGGCAACCGAGGGCAGTGGTTTTGTTTGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR TCA 72 bp | GTCTGCGCTCAGCCGTGTGACTGGGAGGAAGGGACTTaGTTTACTTATGGTGACGGCTCGGCTGGAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VCAQPCDWEEGT*FTYGDGSAGRK Trigger: CTTCCTTCCAGCCGAGCCGTCACCATAAGTAAATCAAGTCCCTTCCTCCCAGTCACACGGCTGAGCGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR CCA 72 bp | GGACAGCAAATTCCTGTCAATCAGGCAGCAAAGCACTaGCGTTTCCTGCTGACGTCCCCACCGCTCCAAACC | + |
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Preference number: 3 (lower is better) Translates to: GQQIPVNQAAKH*RFLLTSPPLQT Trigger: GGTTTGGAGCGGTGGGGACGTCAGCAGGAAACGCCAGTGCTTTGCTGCCTGATTGACAGGAATTTGCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| 3UTR GCA 72 bp | ATGGGCGCTAACCCTGAACACACTGCAGTACTGCTCTaGACATACTGGCCATGGTGGCAAGGAGGACGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: MGANPEHTAVLL*TYWPWWQGGRY Trigger: ATACCGTCCTCCTTGCCACCATGGCCAGTATGTGCAGAGCAGTACTGCAGTGTGTTCAGGGTTAGCGCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR CCA 72 bp | AACCCTGAACACACTGCAGTACTGCTCTGCACATACTaGCCATGGTGGCAAGGAGGACGGTATCCACGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NPEHTAVLLCTY*PWWQGGRYPRL Trigger: GAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATGTGCAGAGCAGTACTGCAGTGTGTTCAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR CCA 72 bp | CCAAGAACACAAACAAAACCACTGCCCTCGGTTGCCTaGATGAGGACTGCTAGCTCTAGGGTGTGGCTACTC | + |
|
Preference number: 3 (lower is better) Translates to: PRTQTKPLPSVA*MRTASSRVWLL Trigger: GAGTAGCCACACCCTAGAGCTAGCAGTCCTCATCCAGGCAACCGAGGGCAGTGGTTTTGTTTGTGTTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR GCA 72 bp | TTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTaGACGCGGCCCTTTGCAGGGGGAAGTAGTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LYTVQNIRSSAG*TRPFAGGSSSN Trigger: ATTTGAACTACTTCCCCCTGCAAAGGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR CCA 72 bp | CTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATaGGTGTGCAGTTTCTTCCCAAAGAATTGTGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSLPDSALSTVL*VCSFFPKNCAS Trigger: ACTTGCACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR GCA 72 bp | CTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTaGAGTTTCTTCCCAAAGAATTGTGCAAGTCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPDSALSTVLWV*SFFPKNCASQS Trigger: GCTTTGACTTGCACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR TCA 72 bp | GCTACAAGAGTTTTGCAATTTCAAGCCTCAATGGTCTaGGCCTCCCCGACTCAGCCTTATCGACTGTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ATRVLQFQASMV*ASPTQPYRLSY Trigger: ATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTCTTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCTGGGTCCCCAGCAGGTGACCAGTCGTTAAATGGACATGACATGTATGTAGAATCCAGAGACAGCTaGGGTTCTCCTGATAATACT | + |
|
Preference number: 3 (lower is better) Translates to: MPGSPAGDQSLNGHDMYVESRDS*GSPDNT Trigger: AGTATTATCAGGAGAACCCAAGCTGTCTCTGGATTC...TACATACATGTCATGTCCATTTAACGACTGGTCACCTGCTGGGGACCCAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR-3UTR CAA 90 bp | CGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGGAATCCAGAGACAGCTaGGGTTCTCCTGATAATACT | + |
|
Preference number: 3 (lower is better) Translates to: RLSLIDCPMGVQFLPKELESRDS*GSPDNT Trigger: AGTATTATCAGGAGAACCCAAGCTGTCTCTGGATTC...CAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTGGACTACAGGGGAAAGATTTCAGAATGAGCTACAAGAGTTTTGCAATTAGGAAGTGGTGGTTTTaGTCTCTCCCTGTTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SSGLQGKDFRMSYKSFAIRKWWF*SLPVPT Trigger: AGTGGGAACAGGGAGAGACAAAAACCACCACTTCCT...AATTGCAAAACTCTTGTAGCTCATTCTGAAATCTTTCCCCTGTAGTCCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGCATTCGGATTCTGCCTTCAGGAACGGGCGCTGATTGTCCGGGAAGGCCACTCGGGGCTCCTGCTTaGTCCCCATGGGTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGIRILPSGTGADCPGRPLGAPA*SPWVTG Trigger: TCCAGTCACCCATGGGGATCAAGCAGGAGCCCCGAG...TGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCTTGCAGGGGCTGATGTaGTGGCCGGGGGACCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLCGRYMSPVGMQSGATVLQGLM*WPGDRK Trigger: TTTGCGGTCCCCCGGCCACCACATCAGCCCCTGCAA...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTATTCTGATGGGTGGGTaGCAGAGGAGTGGCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGILMGG*QRSGGR Trigger: CCGCCCGCCACTCCTCTGTCACCCACCCATCAGAAT...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACATTCTGATGGGTGGGTaGCAGAGGAGTGGCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HEKAVECPTLSQLCVLSHILMGG*QRSGGR Trigger: CCGCCCGCCACTCCTCTGTCACCCACCCATCAGAAT...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTGGTTCTGGAAGTGAGTaGGGAGTCGGGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGGSGSE*GVGAGP Trigger: GGGTCCTGCCCCGACTCCTCACTCACTTCCAGAACC...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTCAGGGGCTGATGTGGTaGCCGGGGGACCGCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGQGLMW*PGDRKC Trigger: ACATTTGCGGTCCCCCGGCCACCACATCAGCCCCTG...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAACGGGCGCTGATTGTCCGGGAAGGCCATAGAGAAGAGTGCATCCGGGTCCTGGAACCCATGTGCTaGAGGACCAGGCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QERALIVREGHREECIRVLEPMC*RTRHPR Trigger: CCTGGGATGCCTGGTCCTCCAGCACATGGGTTCCAG...GACCCGGATGCACTCTTCTCTATGGCCTTCCCGGACAATCAGCGCCCGTTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCGTCCAGGCGATGAAGTaGGCATTGGCTGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLCGRYMSPVGMQSGATVVQAMK*ALAGSS Trigger: GGATGACCCAGCCAATGCCCACTTCATCGCCTGGAC...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTTCCAGGTTCTGGAAGTaGGTGAGGAGTCGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGSRFWK*VRSRGR Trigger: CCTGCCCCGACTCCTCACTCACTTCCAGAACCTGGA...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACTCCAGGTTCTGGAAGTaGGTGAGGAGTCGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HEKAVECPTLSQLCVLSHSRFWK*VRSRGR Trigger: CCTGCCCCGACTCCTCACTCACTTCCAGAACCTGGA...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTCGGTGTAGGGGAGGCTaGTGCAGCGATCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGRCRGG*CSDPCP Trigger: TGGACATGGATCGCTGCAGCAGCCTCCCCTACACCG...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGGGGAATTCTGATGGGTaGGTGACAGAGGAGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGCGVSHAQSALCPVPHVGNSDG*VTEEWR Trigger: CCGCCACTCCTCTGTCACCCACCCATCAGAATTCCC...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTCGGATTCTGCCTTCAGGAACGGGCGCTGATTGTCCGGGAAGGCCAATCCCCATGGGTGACTaGAACCCATGTGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGIRILPSGTGADCPGRPIPMGD*NPCAGG Trigger: TCCTCCAGCACATGGGTTCCAGTCACCCATGGGGAT...TGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTCGGATTCTGCCTTCAGGAACGGGCGCTGATTGTCCGGGAAGGCCAGGCGAGCAACCTTCATaGCTGCTGGAGAAATACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGIRILPSGTGADCPGRPGEQPS*LLEKYP Trigger: CGGGTATTTCTCCAGCAGCCATGAAGGTTGCTCGCC...TGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| 3UTR CAA 72 bp | GGACGGTATCCACGTCTCCCCAGGAAGTGGTGGTTTTaGTCTCTCCCTGTTCCCACTCCTCCCGAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRYPRLPRKWWF*SLPVPTPPEPR Trigger: CCTTGGCTCGGGAGGAGTGGGAACAGGGAGAGACAAAAACCACCACTTCCTGGGGAGACGTGGATACCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATTCCAGGGGTGAGACCTaGGGTGGGCAGAGTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNSRGET*GGQSCL Trigger: CAGGCAACTCTGCCCACCTCAGGTCTCACCCCTGGA...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATCTCGGGGCTCCTGCTTaGTCCCCATGGGTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNLGAPA*SPWVTG Trigger: TCCAGTCACCCATGGGGATCAAGCAGGAGCCCCGAG...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGCATTCGGATTCTGCCTTCAGGAACGGGCGCTGATTGTCCGGGAAGGCCAGCCTCTCATGTAGGATaGCTGGCAGTTAGGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGIRILPSGTGADCPGRPASHVG*LAVRHF Trigger: GAAGTGCCTAACTGCCAGTCATCCTACATGAGAGGC...TGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGCATTCGGATTCTGCCTTCAGGAACGGGCGCTGATTGTCCGGGAAGGCCAAGCAACCTTCATGGCTaGTGGAGAAATACCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGIRILPSGTGADCPGRPSNLHG*WRNTRL Trigger: GAGGCGGGTATTTCTCCAGCAGCCATGAAGGTTGCT...TGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACGAAGTGGGCATTGGCTaGGTCATCCAGGAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HEKAVECPTLSQLCVLSHEVGIG*VIQEGD Trigger: GTCACCCTCCTGGATGACCCAGCCAATGCCCACTTC...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACAGGGTGACAAGGAACTaGCACAGCTGCAGAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HEKAVECPTLSQLCVLSHRVTRN*HSCREP Trigger: AGGCTCTCTGCAGCTGTGGCAGTTCCTTGTCACCCT...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATGGGGCATTCGGATTCTaGCTTCAGGAACGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNGAFGF*LQERAL Trigger: CAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCC...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCACCCACCCCTTGAACTaGGCCAGCTCCAGGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPTHPLN*ASSRGE Trigger: CTCACCCCTGGAGCTGGCCCAGTTCAAGGGGTGGGT...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCCAGGGGCTGATGTGGTaGCCGGGGGACCGCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPQGLMW*PGDRKC Trigger: ACATTTGCGGTCCCCCGGCCACCACATCAGCCCCTG...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGCATTCGGATTCTGCCTTCAGGAACGGGCGCTGATTGTCCGGGAAGGCCAAACCTTCATGGCTGCTaGAGAAATACCCGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGIRILPSGTGADCPGRPNLHGC*RNTRLS Trigger: TGAGAGGCGGGTATTTCTCCAGCAGCCATGAAGGTT...TGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCGCGGGGTTAATGGCTTaGACCCAGAGGGAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPAGLMA*TQREAS Trigger: GGAAGCCTCCCTCTGGGTTCAAGCCATTAACCCCGC...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCGTGGGAGGTGGAGCATaGAGCACCACTGCAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HSSRAKVFVLKGVESRDSVGGGA*STTAVP Trigger: CGGGACTGCAGTGGTGCTTCATGCTCCACCTCCCAC...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATTCGGAGGAGGGGCTGTaGAGCTCCCGTTTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNSEEGL*SSRLIL Trigger: CAAGATCAAACGGGAGCTGCACAGCCCCTCCTCCGA...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACGGAATCCTTCATGGCTaGTGGAGAAATACCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HEKAVECPTLSQLCVLSHGILHG*WRNTRL Trigger: GAGGCGGGTATTTCTCCAGCAGCCATGAAGGATTCC...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCGGGGCATTCGGATTCTaGCTTCAGGAACGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPGAFGF*LQERAL Trigger: CAGCGCCCGTTCCTGAAGGCAGAATCCGAATGCCCC...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCCGGTGTAGGGGAGGCTaGTGCAGCGATCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPRCRGG*CSDPCP Trigger: TGGACATGGATCGCTGCAGCAGCCTCCCCTACACCG...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCTTCAGGCATCATCTTTaGCATTTGCAGGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLCGRYMSPVGMQSGATVFRHHL*HLQGLM Trigger: CATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAA...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATTCTGCCGGTGGTAGCTaGGGCGACTATCTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNSAGGS*GDYLQE Trigger: TTCCTGGAGATAGTCGCCCCAGCTACCACCGGCAGA...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCTGGAACCCATGTGCTaGAGGACCAGGCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEPPRLSLIDCPMGVQFLLEPMC*RTRHPR Trigger: CCTGGGATGCCTGGTCCTCCAGCACATGGGTTCCAG...AAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATTGGTGGGCTCCTGCTTaGCTTTGCCTTCCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNWWAPA*LCLPVS Trigger: AGAGACTGGAAGGCAAAGTCAAGCAGGAGCCCACCA...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTGGTCATCCAGGAGGGTaGCAAGGAACTGCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEPPRLSLIDCPMGVQFLGHPGG*QGTATA Trigger: AGCTGTGGCAGTTCCTTGTCACCCTCCTGGATGACC...AAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCTTCAGGAACGGGCGCTaGTTGTCCGGGAAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPFRNGR*LSGKAI Trigger: TATGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAA...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCGAGCAGTTATCAGACTaGAAATCTGGGACAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLCGRYMSPVGMQSGATVEQLSD*KSGTNC Trigger: GCAGTTTGTCCCAGATTTTCAGTCTGATAACTGCTC...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCTCGGAGGAGGGGCTGTaGAGCTCCCGTTTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPSEEGL*SSRLIL Trigger: CAAGATCAAACGGGAGCTGCACAGCCCCTCCTCCGA...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTTGTAGGGGAGGCTGCTaGAGCGATCCATGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEPPRLSLIDCPMGVQFLCRGGC*SDPCPG Trigger: TCCTGGACATGGATCGCTGCAGCAGCCTCCCCTACA...AAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCCCAAGAGCCTGCTCGTaGCTACAGGACGACAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPPRACS*LQDDNS Trigger: CGAGTTGTCGTCCTGTAGCCACGAGCAGGCTCTTGG...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCACCCACCCCTTGAACTaGGCCAGCTCCAGGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLITHPLN*ASSRGE Trigger: CTCACCCCTGGAGCTGGCCCAGTTCAAGGGGTGGGT...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCCTGGAACCCATGTGCTaGAGGACCAGGCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSRAKVFVLKGVESRDSLEPMC*RTRHPR Trigger: CCTGGGATGCCTGGTCCTCCAGCACATGGGTTCCAG...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGCTGGCTAAGATCCTaGAACAACTCTTCAGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: EGCGVSHAQSALCPVPHVSWLRS*NNSSES Trigger: CGATTCTGAAGAGTTGTTTCAGGATCTTAGCCAGCT...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACTCAGACAGCTGTCGCTaGAATCTCTGTTCTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HEKAVECPTLSQLCVLSHSDSCR*NLCSDG Trigger: TCCATCAGAACAGAGATTTCAGCGACAGCTGTCTGA...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCTGGTGGGCTCCTGCTTaGCTTTGCCTTCCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPWWAPA*LCLPVS Trigger: AGAGACTGGAAGGCAAAGTCAAGCAGGAGCCCACCA...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCGGTCATCCAGGAGGGTaGCAAGGAACTGCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSRAKVFVLKGVESRDSGHPGG*QGTATA Trigger: AGCTGTGGCAGTTCCTTGTCACCCTCCTGGATGACC...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGACCGCAAATGTTTGTTaGTGTGATCCAGGTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGCGVSHAQSALCPVPHVTANVC*CDPGSG Trigger: TCCAGAACCTGGATCACAGCAACAAACATTTGCGGT...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAACGGGCGCTGATTGTCCGGGAAGGCCATAGAGAAGAGTGCATCCGGGTCTCATACAGTGGGTCATaGTATTCCTGCTTGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: QERALIVREGHREECIRVSYSGS*YSCLNP Trigger: GGGATTCAAGCAGGAATACCATGACCCACTGTATGA...GACCCGGATGCACTCTTCTCTATGGCCTTCCCGGACAATCAGCGCCCGTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTATCCCCATGGGTGACTaGAACCCATGTGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEPPRLSLIDCPMGVQFLIPMGD*NPCAGG Trigger: TCCTCCAGCACATGGGTTCCAGTCACCCATGGGGAT...AAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGGGTTCTGGAAGTGAGTaGGGAGTCGGGGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKSSRKPVMLASTALPVGSGSE*GVGAGP Trigger: GGGTCCTGCCCCGACTCCTCACTCACTTCCAGAACC...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACCAGCCACCTTCTGCATaGTGCCCTTTTCATAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HEKAVECPTLSQLCVLSHQPPSA*CPFHSN Trigger: ATTACTATGAAAAGGGCATCATGCAGAAGGTGGCTG...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCAAATCTGGGACAAACTaGTCATCATCAGGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLCGRYMSPVGMQSGATVKSGTN*SSSGTC Trigger: ACAAGTTCCTGATGATGAGCAGTTTGTCCCAGATTT...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCAGGGTGACAAGGAACTaGCACAGCTGCAGAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSRAKVFVLKGVESRDSRVTRN*HSCREP Trigger: AGGCTCTCTGCAGCTGTGGCAGTTCCTTGTCACCCT...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCGGGAATTCTGATGGGTaGGTGACAGAGGAGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLIGNSDG*VTEEWR Trigger: CCGCCACTCCTCTGTCACCCACCCATCAGAATTCCC...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTTTGCAGGGGCTGATGTaGTGGCCGGGGGACCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCLQGLM*WPGDRK Trigger: TTTGCGGTCCCCCGGCCACCACATCAGCCCCTGCAA...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCTCTGCCGGTGGTAGCTaGGGCGACTATCTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLISAGGS*GDYLQE Trigger: TTCCTGGAGATAGTCGCCCCAGCTACCACCGGCAGA...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCATCCCCATGGGTGACTaGAACCCATGTGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSRAKVFVLKGVESRDSIPMGD*NPCAGG Trigger: TCCTCCAGCACATGGGTTCCAGTCACCCATGGGGAT...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATTACGGGAATCCTTCATaGCTGCTGGAGAAATACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNYGNPS*LLEKYP Trigger: CGGGTATTTCTCCAGCAGCCATGAAGGATTCCCGTA...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCGAAGTGGGCATTGGCTaGGTCATCCAGGAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLIEVGIG*VIQEGD Trigger: GTCACCCTCCTGGATGACCCAGCCAATGCCCACTTC...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATAACTCTTCAGAATCGTaGGCCAGATCTGTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNNSSES*ARSVST Trigger: TGTGGACACAGATCTGGCTCACGATTCTGAAGAGTT...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCGCCTCTCATGTAGGATaGCTGGCAGTTAGGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSRAKVFVLKGVESRDSASHVG*LAVRHF Trigger: GAAGTGCCTAACTGCCAGTCATCCTACATGAGAGGC...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGAGGAACACAATTTCAGGCATCATCTTTaGCATTTGCAGGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVPRSVSSVSCPTREEHNFRHHL*HLQGLM Trigger: CATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAA...ATTGTGTTCCTCACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGGTCCAGGCGATGAAGTaGGCATTGGCTGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLIDCPMGVQFLPKELVQAMK*ALAGSS Trigger: GGATGACCCAGCCAATGCCCACTTCATCGCCTGGAC...CAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGGGTCCCCAGCAGGTGACCAGTCGTTAAATGGACATGACATGTATGTAGATCTTGGTGGGAGGTaGAGCATGAAGCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPGSPAGDQSLNGHDMYVDLGGR*SMKHHC Trigger: GCAGTGGTGCTTCATGCTCCACCTCCCACCAAGATC...TACATACATGTCATGTCCATTTAACGACTGGTCACCTGCTGGGGACCCAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTTGTGCAGCTCCCGTTTaGTCTTGGTGGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCCAAPV*SWWEVE Trigger: CTCCACCTCCCACCAAGATCAAACGGGAGCTGCACA...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTTTCAGGAACGGGCGCTaGTTGTCCGGGAAGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCFRNGR*LSGKAI Trigger: TATGGCCTTCCCGGACAATCAGCGCCCGTTCCTGAA...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTCCAAGAGCCTGCTCGTaGCTACAGGACGACAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCPRACS*LQDDNS Trigger: CGAGTTGTCGTCCTGTAGCCACGAGCAGGCTCTTGG...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTTGTTCTGATGGATACTaGCTTTCAGGCATCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGCSDGY*LSGIIF Trigger: AAAGATGATGCCTGAAAGCCAGTATCCATCAGAACA...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GATAATACTCAAAGGGCAAGCTTTAGGAACAGCCAAGAACACAAACAAAACCACGGCCAGTCCAGGCGATaGAGTGGGCATTGGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNTQRASFRNSQEHKQNHGQSRR*SGHWLG Trigger: ACCCAGCCAATGCCCACTTCATCGCCTGGACTGGCC...GTGGTTTTGTTTGTGTTCTTGGCTGTTCCTAAAGCTTGCCCTTTGAGTATTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTTTAGCACCAAGAGCCTaGTCGTGGCTACAGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCLAPRA*SWLQDD Trigger: GTCGTCCTGTAGCCACGAGCAGGCTCTTGGTGCTAA...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCATCCTTCATGGCTGCTaGAGAAATACCCGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLIILHGC*RNTRLS Trigger: TGAGAGGCGGGTATTTCTCCAGCAGCCATGAAGGAT...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GATAATACTCAAAGGGCAAGCTTTAGGAACAGCCAAGAACACAAACAAAACCACGCGGGGTTAATGGCTTaGACCCAGAGGGAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DNTQRASFRNSQEHKQNHAGLMA*TQREAS Trigger: GGAAGCCTCCCTCTGGGTTCAAGCCATTAACCCCGC...GTGGTTTTGTTTGTGTTCTTGGCTGTTCCTAAAGCTTGCCCTTTGAGTATTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGGACTACAGGGGAAAGATTTCAGAATGAGCTACAAGAGTTTTGCAATTTCCAGGGGTGAGACCTaGGGTGGGCAGAGTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGLQGKDFRMSYKSFAISRGET*GGQSCL Trigger: CAGGCAACTCTGCCCACCTCAGGTCTCACCCCTGGA...AATTGCAAAACTCTTGTAGCTCATTCTGAAATCTTTCCCCTGTAGTCCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTGCCTCTCATGTAGGATaGCTGGCAGTTAGGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCASHVG*LAVRHF Trigger: GAAGTGCCTAACTGCCAGTCATCCTACATGAGAGGC...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGGACTACAGGGGAAAGATTTCAGAATGAGCTACAAGAGTTTTGCAATTGGCCAGTCCAGGCGATaGAGTGGGCATTGGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGLQGKDFRMSYKSFAIGQSRR*SGHWLG Trigger: ACCCAGCCAATGCCCACTTCATCGCCTGGACTGGCC...AATTGCAAAACTCTTGTAGCTCATTCTGAAATCTTTCCCCTGTAGTCCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGGGAATCCTTCATGGCTaGTGGAGAAATACCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRKSSRKPVMLASTALPVGILHG*WRNTRL Trigger: GAGGCGGGTATTTCTCCAGCAGCCATGAAGGATTCC...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | CGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTACATGGTGGGCTCCTaGTTGACTTTGCCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLIDCPMGVQFLPKELYMVGS*LTLPSS Trigger: ACTGGAAGGCAAAGTCAAGCAGGAGCCCACCATGTA...CAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | CGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGATCCTTCATGGCTGCTaGAGAAATACCCGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLIDCPMGVQFLPKELILHGC*RNTRLS Trigger: TGAGAGGCGGGTATTTCTCCAGCAGCCATGAAGGAT...CAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GATAATACTCAAAGGGCAAGCTTTAGGAACAGCCAAGAACACAAACAAAACCACTGTGCAGCTCCCGTTTaGTCTTGGTGGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNTQRASFRNSQEHKQNHCAAPV*SWWEVE Trigger: CTCCACCTCCCACCAAGATCAAACGGGAGCTGCACA...GTGGTTTTGTTTGTGTTCTTGGCTGTTCCTAAAGCTTGCCCTTTGAGTATTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTGGAAATAGGGAATTCTaGTGGGTGGGTGACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCGNREF*WVGDRG Trigger: TCCTCTGTCACCCACCCATCAGAATTCCCTATTTCC...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | CGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTCAGACAGCTGTCGCTaGAATCTCTGTTCTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLIDCPMGVQFLPKELSDSCR*NLCSDG Trigger: TCCATCAGAACAGAGATTTCAGCGACAGCTGTCTGA...CAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCCAGCCACCTTCTGCATaGTGCCCTTTTCATAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLIQPPSA*CPFHSN Trigger: ATTACTATGAAAAGGGCATCATGCAGAAGGTGGCTG...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTTACATGGTGGGCTCCTaGTTGACTTTGCCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCYMVGS*LTLPSS Trigger: ACTGGAAGGCAAAGTCAAGCAGGAGCCCACCATGTA...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | GATAATACTCAAAGGGCAAGCTTTAGGAACAGCCAAGAACACAAACAAAACCACTGTAGGGGAGGCTGCTaGAGCGATCCATGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DNTQRASFRNSQEHKQNHCRGGC*SDPCPG Trigger: TCCTGGACATGGATCGCTGCAGCAGCCTCCCCTACA...GTGGTTTTGTTTGTGTTCTTGGCTGTTCCTAAAGCTTGCCCTTTGAGTATTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGGATCTTGGTGGGAGGTaGAGCATGAAGCACCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKSSRKPVMLASTALPVDLGGR*SMKHQV Trigger: AACTTGGTGCTTCATGCTCCACCTCCCACCAAGATC...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079601.13 |
||
| CDS-3UTR CCA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTTACGGGAATCCTTCATaGCTGCTGGAGAAATACCCG | + |
|
Preference number: 4 (lower is better) Translates to: DSALSTVLWVCSFFPKNCYGNPS*LLEKYP Trigger: CGGGTATTTCTCCAGCAGCCATGAAGGATTCCCGTA...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR CAA 72 bp | TGTGAAGGCATTTTAGTAGTCCATGATCAACGCAGATaGTCATACACTCGGTCCCCTTTCATGGGCGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CEGILVVHDQRR*SYTRSPFMGAN Trigger: GTTAGCGCCCATGAAAGGGGACCGAGTGTATGACAATCTGCGTTGATCATGGACTACTAAAATGCCTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGAGCTGGCTAAGATCCTaGAACAACTCTTCAGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: KRKSSRKPVMLASTALPVSWLRS*NNSSES Trigger: CGATTCTGAAGAGTTGTTTCAGGATCTTAGCCAGCT...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCAAATCTGGGACAAACTaGTCATCATCAGGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLIKSGTN*SSSGTC Trigger: ACAAGTTCCTGATGATGAGCAGTTTGTCCCAGATTT...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTGCAATTTCAAGCCTCAATGGTCTGAGCCTCCCCGACTCAGCCTTATCTGTTCTGATGGATACTaGCTTTCAGGCATCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFCNFKPQWSEPPRLSLICSDGY*LSGIIF Trigger: AAAGATGATGCCTGAAAGCCAGTATCCATCAGAACA...GATAAGGCTGAGTCGGGGAGGCTCAGACCATTGAGGCTTGAAATTGCAAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGTCATACAGTGGGTCATaGTATTCCTGCTTGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKSSRKPVMLASTALPVSYSGS*YSCLNP Trigger: GGGATTCAAGCAGGAATACCATGACCCACTGTATGA...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGGACTACAGGGGAAAGATTTCAGAATGAGCTACAAGAGTTTTGCAATTGGAAATAGGGAATTCTaGTGGGTGGGTGACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGLQGKDFRMSYKSFAIGNREF*WVGDRG Trigger: TCCTCTGTCACCCACCCATCAGAATTCCCTATTTCC...AATTGCAAAACTCTTGTAGCTCATTCTGAAATCTTTCCCCTGTAGTCCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| 3UTR CAA 72 bp | GTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCTaGGGTTCTCCTGATAATACTCAAAGGGCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFVLKGVESRDS*GSPDNTQRASF Trigger: AAAGCTTGCCCTTTGAGTATTATCAGGAGAACCCAAGCTGTCTCTGGATTCGACACCCTTTAAGACAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CCA 90 bp | GATAATACTCAAAGGGCAAGCTTTAGGAACAGCCAAGAACACAAACAAAACCACTCATACAGTGGGTCATaGTATTCCTGCTTGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: DNTQRASFRNSQEHKQNHSYSGS*YSCLNP Trigger: GGGATTCAAGCAGGAATACCATGACCCACTGTATGA...GTGGTTTTGTTTGTGTTCTTGGCTGTTCCTAAAGCTTGCCCTTTGAGTATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | CATACTGGCCATGGTGGCAAGGAGGACGGTATCCACGTCTCCCCAGGAAGTGGTGGCAGGACCCACCCCTaGAACTGGGCCAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTGHGGKEDGIHVSPGSGGRTHP*NWASSR Trigger: CCTGGAGCTGGCCCAGTTCAAGGGGTGGGTCCTGCC...ACCACTTCCTGGGGAGACGTGGATACCGTCCTCCTTGCCACCATGGCCAGTATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS TCA 90 bp | GGCTACAGGACGACAACTCGGAGGAGGGGCTGTGCAGCTCCCGTTTaGTCTTGGTGGGAGGTGGAGCATGAAGCACCACTGCAGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GYRTTTRRRGCAAPV*SWWEVEHEAPLQSR Trigger: CCGGGACTGCAGTGGTGCTTCATGCTCCACCTCCCACCAAGATCAAACGGGAGCTGCACAGCCCCTCCTCCGAGTTGTCGTCCTGTAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168774.8 |
||
| CDS CCA 90 bp | GCGGAGCTGCGGGGACAATGGGCTCTGACATCTGCCGGTGGTAGCTaGGGCGACTATCTCCAGGAACTCCTGACTGAGGAGGGAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AELRGQWALTSAGGS*GDYLQELLTEEGRD Trigger: ATCCCTTCCCTCCTCAGTCAGGAGTTCCTGGAGATAGTCGCCCCAGCTACCACCGGCAGATGTCAGAGCCCATTGTCCCCGCAGCTCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | CGGCTCTGCGGGAGGTACATGAGTCCCGTGGGAATGCAAAGTGGCGCGACTGTCCTGAGGTGGGCAGAGTaGCCTGAGGTGGGGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: RLCGRYMSPVGMQSGATVLRWAE*PEVGEI Trigger: TATTTCCCCCACCTCAGGCAACTCTGCCCACCTCAG...GACAGTCGCGCCACTTTGCATTCCCACGGGACTCATGTACCTCCCGCAGAGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS GCA 90 bp | CAGCTCCCGTTTGATCTTGGTGGGAGGTGGAGCATGAAGCACCACTaGAGTCCCGGCTCTAGCCAACCGGTGAGGTCCAGCTTCGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLPFDLGGRWSMKHH*SPGSSQPVRSSFVR Trigger: TCTGACGAAGCTGGACCTCACCGGTTGGCTAGAGCCGGGACTGCAGTGGTGCTTCATGCTCCACCTCCCACCAAGATCAAACGGGAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACACGTGCTGAGGTGGGCAGAGTaGCCTGAGGTGGGGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: EGCGVSHAQSALCPVPHVLRWAE*PEVGEI Trigger: TATTTCCCCCACCTCAGGCAACTCTGCCCACCTCAG...CACGTGTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCGGCAGGACCCACCCCTaGAACTGGGCCAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPGRTHP*NWASSR Trigger: CCTGGAGCTGGCCCAGTTCAAGGGGTGGGTCCTGCC...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACATGGTGGGCTCCTGCTaGACTTTGCCTTCCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HEKAVECPTLSQLCVLSHMVGSC*TLPSSL Trigger: GAGACTGGAAGGCAAAGTCAAGCAGGAGCCCACCAT...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS TCA 90 bp | GGCTACAGGACGACAACTCGGAGGAGGGGCTGTGCAGCTCCCGTTTaGTCTTGGTGGGAGGTGGAGCATGAAGCACCAAGTTATCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: GYRTTTRRRGCAAPV*SWWEVEHEAPSYQT Trigger: AGTCTGATAACTTGGTGCTTCATGCTCCACCTCCCACCAAGATCAAACGGGAGCTGCACAGCCCCTCCTCCGAGTTGTCGTCCTGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079601.13 |
||
| CDS-3UTR CAA 90 bp | TCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCTGTGCAGCTCCCGTTaGATCTTGGTGGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SEPPRLSLIDCPMGVQFLLCSSR*ILVGGG Trigger: TCCACCTCCCACCAAGATCAAACGGGAGCTGCACAG...AAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTGTACACAGTACAGAATATACGCAGCTCGGCAGGGTGCACGCGGCCCCTGTGCAGCTCCCGTTaGATCTTGGTGGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLYTVQNIRSSAGCTRPLCSSR*ILVGGG Trigger: TCCACCTCCCACCAAGATCAAACGGGAGCTGCACAG...GGGCCGCGTGCACCCTGCCGAGCTGCGTATATTCTGTACTGTGTACAATAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | CATGAGAAGGCTGTGGAGTGTCCCACGCTCAGTCAGCTCTGTGTCCTGTCCCACTTTCAGGCATCATCTTaGGCATTTGCAGGGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HEKAVECPTLSQLCVLSHFQASS*AFAGAD Trigger: ATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAAA...GTGGGACAGGACACAGAGCTGACTGAGCGTGGGACACTCCACAGCCTTCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS TCA 90 bp | GATGGATACTGGCTTTCAGGCATCATCTTTGGCATTTGCAGGGGCTaGTGTGGTGGCCGGGGGACCGCAAATGTTTGTTGCTGTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: DGYWLSGIIFGICRG*CGGRGTANVCCCDP Trigger: TGGATCACAGCAACAAACATTTGCGGTCCCCCGGCCACCACATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAAAGCCAGTATCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS TCA 90 bp | GAAGGGATGGCTGGGCTCAGACAGCTGTCGCTGAAATCTCTGTTCTaGTGGATACTGGCTTTCAGGCATCATCTTTGGCATTTGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EGMAGLRQLSLKSLF*WILAFRHHLWHLQG Trigger: CCCCTGCAAATGCCAAAGATGATGCCTGAAAGCCAGTATCCATCAGAACAGAGATTTCAGCGACAGCTGTCTGAGCCCAGCCATCCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | AAACGAAAAAGTAGCAGGAAGCCAGTAATGCTAGCTAGCACTGCTCTACCTGTGGGCGGGGTTAATGGCTaGAACCCAGAGGGAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRKSSRKPVMLASTALPVGGVNG*NPEGGF Trigger: GAAGCCTCCCTCTGGGTTCAAGCCATTAACCCCGCC...CACAGGTAGAGCAGTGCTAGCTAGCATTACTGGCTTCCTGCTACTTTTTCGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCCATCATCTTTGGCATTaGCAGGGGCTGATGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSRAKVFVLKGVESRDSHHLWH*QGLMWW Trigger: CCACCACATCAGCCCCTGCAAATGCCAAAGATGATG...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS CCA 90 bp | CTTCCAGTCTCTCGGGTACCACGCAAGTATCATCAAAGTACAGCCTaGGGTCCTTCTCATACGGGAATCCTTCATGGCTGCTGGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPVSRVPRKYHQSTA*GPSHTGILHGCWRN Trigger: ATTTCTCCAGCAGCCATGAAGGATTCCCGTATGAGAAGGACCCCAGGCTGTACTTTGATGATACTTGCGTGGTACCCGAGAGACTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAGCCTCCCCGACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTTTTCAGGCATCATCTTaGGCATTTGCAGGGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SEPPRLSLIDCPMGVQFLFQASS*AFAGAD Trigger: ATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAAA...AAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTCGGGGAGGCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | CACTCCTCCCGAGCCAAGGTATTTGTCTTAAAGGGTGTCGAATCCAGAGACAGCGACCATAAAAGGGACTaGCTGATCACAAAACCCATC | + |
|
Preference number: 5 (lower is better) Translates to: HSSRAKVFVLKGVESRDSDHKRD*LITKPI Trigger: GATGGGTTTTGTGATCAGCAAGTCCCTTTTATGGTC...GCTGTCTCTGGATTCGACACCCTTTAAGACAAATACCTTGGCTCGGGAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTCATCATCTTTGGCATTaGCAGGGGCTGATGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSALSTVLWVCSFFPKNCHHLWH*QGLMWW Trigger: CCACCACATCAGCCCCTGCAAATGCCAAAGATGATG...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | GACTCAGCCTTATCGACTGTCCTATGGGTGTGCAGTTTCTTCCCAAAGAATTGTGACCATAAAAGGGACTaGCTGATCACAAAACCCATC | + |
|
Preference number: 5 (lower is better) Translates to: DSALSTVLWVCSFFPKNCDHKRD*LITKPI Trigger: GATGGGTTTTGTGATCAGCAAGTCCCTTTTATGGTC...ACAATTCTTTGGGAAGAAACTGCACACCCATAGGACAGTCGATAAGGCTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGACTACAGGGGAAAGATTTCAGAATGAGCTACAAGAGTTTTGCAATTATGGTGGGCTCCTGCTaGACTTTGCCTTCCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSGLQGKDFRMSYKSFAIMVGSC*TLPSSL Trigger: GAGACTGGAAGGCAAAGTCAAGCAGGAGCCCACCAT...AATTGCAAAACTCTTGTAGCTCATTCTGAAATCTTTCCCCTGTAGTCCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS GCA 72 bp | TCGTGGCTACAGGACGACAACTCGGAGGAGGGGCTGTaGAGCTCCCGTTTGATCTTGGTGGGAGGTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SWLQDDNSEEGL*SSRLILVGGGA Trigger: TGCTCCACCTCCCACCAAGATCAAACGGGAGCTGCACAGCCCCTCCTCCGAGTTGTCGTCCTGTAGCCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS CCA 72 bp | CGGGGACAATGGGCTCTGACATCTGCCGGTGGTAGCTaGGGCGACTATCTCCAGGAACTCCTGACTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RGQWALTSAGGS*GDYLQELLTEE Trigger: CTCCTCAGTCAGGAGTTCCTGGAGATAGTCGCCCCAGCTACCACCGGCAGATGTCAGAGCCCATTGTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS GCA 72 bp | TTTGATCTTGGTGGGAGGTGGAGCATGAAGCACCACTaGAGTCCCGGCTCTAGCCAACCGGTGAGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FDLGGRWSMKHH*SPGSSQPVRSS Trigger: GCTGGACCTCACCGGTTGGCTAGAGCCGGGACTGCAGTGGTGCTTCATGCTCCACCTCCCACCAAGATCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168774.8 |
||
| CDS TCA 72 bp | AAGGAGGCCCCTCTCGATACATGGTGGGCTCCTGCTTaGCTTTGCCTTCCAGTCTCTCGGGTACCACGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KEAPLDTWWAPA*LCLPVSRVPRK Trigger: CTTGCGTGGTACCCGAGAGACTGGAAGGCAAAGTCAAGCAGGAGCCCACCATGTATCGAGAGGGGCCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS CCA 72 bp | TTGCCTGAGGTGGGGGAAATAGGGAATTCTGATGGGTaGGTGACAGAGGAGTGGCGGGCGGGGTTAATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LPEVGEIGNSDG*VTEEWRAGLMA Trigger: AGCCATTAACCCCGCCCGCCACTCCTCTGTCACCCACCCATCAGAATTCCCTATTTCCCCCACCTCAGGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
||
| CDS TCA 72 bp | CTTCTGAGTCAGCACAGTAATCTCGGGGCTCCTGCTTaGTCCCCATGGGTGACTGGAACCCATGTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLSQHSNLGAPA*SPWVTGTHVLE Trigger: CTCCAGCACATGGGTTCCAGTCACCCATGGGGATCAAGCAGGAGCCCCGAGATTACTGTGCTGACTCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 ENSMUST00000170803.2 |
||
| CDS CCA 72 bp | CTGGATACCCCAACGGCGAGCAACCTTCATGGCTGCTaGAGAAATACCCGCCTCTCATGTAGGATGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: LDTPTASNLHGC*RNTRLSCRMTG Trigger: GCCAGTCATCCTACATGAGAGGCGGGTATTTCTCCAGCAGCCATGAAGGTTGCTCGCCGTTGGGGTATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
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| CDS GCA 72 bp | GCCTGGGGTCCTTCTCATACGGGAATCCTTCATGGCTaGTGGAGAAATACCCGCCTCTCATGTAGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: AWGPSHTGILHG*WRNTRLSCRMT Trigger: AGTCATCCTACATGAGAGGCGGGTATTTCTCCAGCAGCCATGAAGGATTCCCGTATGAGAAGGACCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| CDS GCA 72 bp | CTTCTGGATACCCCAACGGCGAGCAACCTTCATGGCTaGTGGAGAAATACCCGCCTCTCATGTAGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: LLDTPTASNLHG*WRNTRLSCRMT Trigger: AGTCATCCTACATGAGAGGCGGGTATTTCTCCAGCAGCCATGAAGGTTGCTCGCCGTTGGGGTATCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170803.2 |
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| CDS CAA 72 bp | TCTGTTCTGATGGATACTGGCTTTCAGGCATCATCTTaGGCATTTGCAGGGGCTGATGTGGTGGCCGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SVLMDTGFQASS*AFAGADVVAGG Trigger: TCCCCCGGCCACCACATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAAAGCCAGTATCCATCAGAACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| CDS CAA 90 bp | GCTGAAATCTCTGTTCTGATGGATACTGGCTTTCAGGCATCATCTTaGGCATTTGCAGGGGCTGATGTGGTGGCCGGGGGACCGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: AEISVLMDTGFQASS*AFAGADVVAGGPQM Trigger: CATTTGCGGTCCCCCGGCCACCACATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAAAGCCAGTATCCATCAGAACAGAGATTTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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| CDS TCA 72 bp | CTTTCTGTCAATCAAAGGTCGCCCTCGACAGTCCTCTaGTCGAGATTTCCCTGGGACCATAAAAGGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: LSVNQRSPSTVL*SRFPWDHKRDL Trigger: CAAGTCCCTTTTATGGTCCCAGGGAAATCTCGATCAGAGGACTGTCGAGGGCGACCTTTGATTGACAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 ENSMUST00000170393.2 |
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| CDS TCA 72 bp | GCTGGGCTCAGACAGCTGTCGCTGAAATCTCTGTTCTaGTGGATACTGGCTTTCAGGCATCATCTTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: AGLRQLSLKSLF*WILAFRHHLWH Trigger: ATGCCAAAGATGATGCCTGAAAGCCAGTATCCATCAGAACAGAGATTTCAGCGACAGCTGTCTGAGCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079601.13 ENSMUST00000168774.8 |
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