Pregenerated sensors for ETV4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017724Ensembl transcript IDs: ENSMUST00000017868.7, ENSMUST00000107176.8, ENSMUST00000164750.8
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGTGAGCCACAGCGAACTTCGGCTACTGCCTTTAGATTTGGCCTaGCTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: QVSHSELRLLPLDLA*LHCLSRRLWLAAES Trigger: AGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAGGCAGGCCAAATCTAAAGGCAGTAGCCGAAGTTCGCTGTGGCTCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR CCA 90 bp | CATAATAAACAAGGGAAGTCCCTGTATGTCCCCAGAATAGAACACTaGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTGAGCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: HNKQGKSLYVPRIEH*ISVVGVRNLASEQD Trigger: GTCTTGCTCAGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGGGACTTCCCTTGTTTATTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR CAA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTaGGCCTCTGAGCAAGACCTAGGCAGAGGCCAAGCTGAACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VPRIEHWISVVGVRN*ASEQDLGRGQAELK Trigger: CTTCAGTTCAGCTTGGCCTCTGCCTAGGTCTTGCTCAGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATGGGATAGTGGAGCTCTaGCCCCAGAGACTTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: LHCLSRRLWLAAESGQEYGIVEL*PQRLLQ Trigger: CTGTAGAAGTCTCTGGGGTCAGAGCTCCACTATCCC...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCCTTTCCCGCAGACTCTaGTTAGCAGCTGAGTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: CPQNRTLDLCGGGEELGLLSRRL*LAAESG Trigger: GCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAG...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR CAA 90 bp | AAGGTACAGGTGAGCCACAGCGAACTTCGGCTACTGCCTTTAGATTaGGCCTGCCTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: KVQVSHSELRLLPLD*ACLHCLSRRLWLAA Trigger: AGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAGGCAGGCCAAATCTAAAGGCAGTAGCCGAAGTTCGCTGTGGCTCACCTGTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCGGGATAGTGGAGCTCTaGCCCCAGAGACTTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: VCPQNRTLDLCGGGEELGGIVEL*PQRLLQ Trigger: CTGTAGAAGTCTCTGGGGTCAGAGCTCCACTATCCC...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR GCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATCCGCCCACATGCTCCTaGCTCCCAGAGCACAGCACC | + |
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Preference number: 2 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNPPTCS*LPEHST Trigger: GGTGCTGTGCTCTGGGAGGCAGGAGCATGTGGGCGG...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCAGCTGCCGCCCACATaGTCCTGCCTCCCAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GEAEALLRSGIRGKGGIRQLPPT*SCLPEH Trigger: GTGCTCTGGGAGGCAGGAGCATGTGGGCGGCAGCTG...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAAACAAGGGGATAGTGGAGCTCTaGCCCCAGAGACTTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: GDTGCSENPLGPVAIINKGIVEL*PQRLLQ Trigger: CTGTAGAAGTCTCTGGGGTCAGAGCTCCACTATCCC...CTTGTTTATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAAACAAGAGGCAGAGGCCAAGCTaGACTGAAGGTACAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GDTGCSENPLGPVAIINKRQRPS*TEGTGE Trigger: CTCACCTGTACCTTCAGTTCAGCTTGGCCTCTGCCT...CTTGTTTATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGAGACACAGGGTGTTCTaGGAATCCCCTTGGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AEALLRSGIRGKGGIRPGRHRVF*ESPWPC Trigger: ACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCT...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGGAGGAACTTGGCCTCTaGGCAAGACCTAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GEAEALLRSGIRGKGGIREELGL*ARPRQR Trigger: CCTCTGCCTAGGTCTTGCTCAGAGGCCAAGTTCCTC...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTGAGGAACTTGGCCTCTaGGCAAGACCTAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TGEAEALLRSGIRGKGGIEELGL*ARPRQR Trigger: CCTCTGCCTAGGTCTTGCTCAGAGGCCAAGTTCCTC...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGGAACTTTGTCTCCCATaGGGGGTTGGGAGAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GEAEALLRSGIRGKGGIRELCLP*GVGRGE Trigger: CTCCCCTCTCCCAACCCCCCATGGGAGACAAAGTTC...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGAGGCAGAGGCCAAGCTaGACTGAAGGTACAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GEAEALLRSGIRGKGGIRRQRPS*TEGTGE Trigger: CTCACCTGTACCTTCAGTTCAGCTTGGCCTCTGCCT...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR TCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGACACAGGGTGTTCTaGGAATCCCCTTGGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TGEAEALLRSGIRGKGGIRHRVF*ESPWPC Trigger: ACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCT...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR CCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTCTTTCCCGCAGACTCTaGTTAGCAGCTGAGTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TGEAEALLRSGIRGKGGILSRRL*LAAESG Trigger: GCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAG...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR CCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATCCCAGAATAGAACACTaGATCTCTGTGGTGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNPRIEH*ISVVGV Trigger: CACCCCCACCACAGAGATCCAGTGTTCTATTCTGGG...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR CCA 72 bp | GATTTGGCCTGCCTCCACTGTCTTTCCCGCAGACTCTaGTTAGCAGCTGAGTCTGGCCAGGAGTATCAGATG | + |
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Preference number: 3 (lower is better) Translates to: DLACLHCLSRRL*LAAESGQEYQM Trigger: CATCTGATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAGGCAGGCCAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR CCA 72 bp | CAAGGGAAGTCCCTGTATGTCCCCAGAATAGAACACTaGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: QGKSLYVPRIEH*ISVVGVRNLAS Trigger: AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGGGACTTCCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| 3UTR-3UTR CAA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATCCAATACCAAATCAGTaGATATATACACTGAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNPIPNQ*IYTLSN Trigger: GTTGCTCAGTGTATATATCAACTGATTTGGTATTGG...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCGACCCCACCCTGGCTTaGAGCGGGCTGGCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLDPTLA*SGLASL Trigger: CAGGCTGGCCAGCCCGCTTCAAGCCAGGGTGGGGTC...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGACCCCACCCTGGCTTaGAGCGGGCTGGCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTDPTLA*SGLASL Trigger: CAGGCTGGCCAGCCCGCTTCAAGCCAGGGTGGGGTC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCCCGGCGCTGGTAGGGTaGCCCCTCCCGGAAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLPALVG*PLPESS Trigger: GGAGCTTTCCGGGAGGGGCCACCCTACCAGCGCCGG...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCCCGGCGCTGGTAGGGTaGCCCCTCCCGGAAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTPALVG*PLPESS Trigger: GGAGCTTTCCGGGAGGGGCCACCCTACCAGCGCCGG...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATCGGGGGCGGGGGACTTaGTGGCGATTTGTCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LHCLSRRLWLAAESGQEYRGRGT*WRFVWG Trigger: CCCCCAGACAAATCGCCATCAAGTCCCCCGCCCCCG...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTGCGGAGCGGGGCCAGTaGGTTCTGGGAGGTAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASAERGQ*VLGGRQ Trigger: CTGCCTACCTCCCAGAACTCACTGGCCCCGCTCCGC...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGCGGAGCGGGGCCAGTaGGTTCTGGGAGGTAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTAERGQ*VLGGRQ Trigger: CTGCCTACCTCCCAGAACTCACTGGCCCCGCTCCGC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | AGTCTGGCCAGGAGTATCAGATGGGATAGTGGAGCTCTGACCCCAGAGACTTCTCCGGCGCTGGTAGGGTaGCCCCTCCCGGAAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLARSIRWDSGALTPETSPALVG*PLPESS Trigger: GGAGCTTTCCGGGAGGGGCCACCCTACCAGCGCCGG...AGAAGTCTCTGGGGTCAGAGCTCCACTATCCCATCTGATACTCCTGGCCAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAAGGGAGCCCGGGTCCATaGGCTTTCCCTGCGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQGSPGP*AFPAGP Trigger: TGGTCCCGCAGGGAAAGCTCATGGACCCGGGCTCCC...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAGGGAGCCCGGGTCCATaGGCTTTCCCTGCGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: ERGDTGCSENPLGPVAIIGSPGP*AFPAGP Trigger: TGGTCCCGCAGGGAAAGCTCATGGACCCGGGCTCCC...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATTCCCGGCCCCCTCCCTaGGGAGATGTGAAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LHCLSRRLWLAAESGQEYSRPPP*GDVKEW Trigger: CCACTCCTTCACATCTCCTCAGGGAGGGGGCCGGGA...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTCCCGGCCCCCTCCCTaGGGAGATGTGAAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLSRPPP*GDVKEW Trigger: CCACTCCTTCACATCTCCTCAGGGAGGGGGCCGGGA...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCTCCCGGCCCCCTCCCTaGGGAGATGTGAAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTSRPPP*GDVKEW Trigger: CCACTCCTTCACATCTCCTCAGGGAGGGGGCCGGGA...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAGCCCCTGGGTACCTGTaGCCACTGACCCCACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ERGDTGCSENPLGPVAIIAPGYL*PLTPPW Trigger: CCAGGGTGGGGTCAGTGGGCACAGGTACCCAGGGGC...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGTGTTGATAGGGGGCTaGGAGAGGTTCCCGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTVLIGG*ERFPAP Trigger: GGGGGCCGGGAACCTCTCCCAGCCCCCTATCAACAC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTCTGCTGGGGGTAGGGTaGGCAGGGCTCCGACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASLLGVG*AGLRQL Trigger: CAACTGTCGGAGCCCTGCCCACCCTACCCCCAGCAG...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTGGCCAGGGTGGGACTaGGAAGAGCTGGAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLWPGWD*EELEAL Trigger: GAGAGCCTCCAGCTCTTCCCAGTCCCACCCTGGCCA...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCTGGCCAGGGTGGGACTaGGAAGAGCTGGAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTWPGWD*EELEAL Trigger: GAGAGCCTCCAGCTCTTCCCAGTCCCACCCTGGCCA...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAAGTGTTGATAGGGGGCTaGGAGAGGTTCCCGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQVLIGG*ERFPAP Trigger: GGGGGCCGGGAACCTCTCCCAGCCCCCTATCAACAC...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCCTGCTGGGGGTAGGGTaGGCAGGGCTCCGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTLLGVG*AGLRQL Trigger: CAACTGTCGGAGCCCTGCCCACCCTACCCCCAGCAG...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | AGTCTGGCCAGGAGTATCAGATGGGATAGTGGAGCTCTGACCCCAGAGACTTCTCGGGGGCGGGGGACTTaGTGGCGATTTGTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLARSIRWDSGALTPETSRGRGT*WRFVWS Trigger: ACTCCAGACAAATCGCCATCAAGTCCCCCGCCCCCG...AGAAGTCTCTGGGGTCAGAGCTCCACTATCCCATCTGATACTCCTGGCCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107176.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCCACATGTCCACGGGCTaGTGGAAGACGGAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLHMSTG*WKTELC Trigger: GCACAGCTCCGTCTTCCAGCAGCCCGTGGACATGTG...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTCACATGTCCACGGGCTaGTGGAAGACGGAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASHMSTG*WKTELC Trigger: GCACAGCTCCGTCTTCCAGCAGCCCGTGGACATGTG...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | AGTCTGGCCAGGAGTATCAGATGGGATAGTGGAGCTCTGACCCCAGAGACTTCTGCTGCTGTTCTGCCCTaGAAAAGGGCTGCAGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLARSIRWDSGALTPETSAAVLP*KRAAGA Trigger: CGCCCCTGCAGCCCTTTTCCAGGGCAGAACAGCAGC...AGAAGTCTCTGGGGTCAGAGCTCCACTATCCCATCTGATACTCCTGGCCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTCACCAAGGTACCCGTaGCCAGGGTGGGACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLSPRYP*PGWDWE Trigger: TTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGA...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGGGGCCAGTGAGTTCTaGGAGGTAGGCAGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTGASEF*EVGRTL Trigger: GAGAGTCCTGCCTACCTCCCAGAACTCACTGGCCCC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATGGGGCCAGTGAGTTCTaGGAGGTAGGCAGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHCLSRRLWLAAESGQEYGASEF*EVGRTL Trigger: GAGAGTCCTGCCTACCTCCCAGAACTCACTGGCCCC...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATCACTGTCCGGTACCTaGGCTTCTGCGAGCCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQSLSGT*ASASHV Trigger: GACGTGGCTCGCAGAAGCTCAGGTACCGGACAGTGA...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATATCACTGTCCGGTACCTaGGCTTCTGCGAGCCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERGDTGCSENPLGPVAIISLSGT*ASASHV Trigger: GACGTGGCTCGCAGAAGCTCAGGTACCGGACAGTGA...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGGACCCCACCCTGGCTTaGAGCGGGCTGGCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEAEALLRSGIRGKGGIRDPTLA*SGLASL Trigger: CAGGCTGGCCAGCCCGCTTCAAGCCAGGGTGGGGTC...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTTCCATGAGCTTTCCCTaGGGGACCATCAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASSMSFP*GTISAS Trigger: CGAAGCGCTGATGGTCCCGCAGGGAAAGCTCATGGA...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCTCCATGAGCTTTCCCTaGGGGACCATCAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTSMSFP*GTISAS Trigger: CGAAGCGCTGATGGTCCCGCAGGGAAAGCTCATGGA...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTGCTCTCAGGAGGCTCTaGTGCTGTTCTGCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASALRRL*CCSALE Trigger: TTCCAGGGCAGAACAGCAGCAGAGCCTCCTGAGAGC...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAACACATGTCCACGGGCTaGTGGAAGACGGAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQHMSTG*WKTELC Trigger: GCACAGCTCCGTCTTCCAGCAGCCCGTGGACATGTG...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAAGGGACTGGGAAGAGCTaGAGGCTCTCAGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQGTGKS*RLSGGS Trigger: AGAGCCTCCTGAGAGCCTCCAGCTCTTCCCAGTCCC...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCTCACCAAGGTACCCGTaGCCAGGGTGGGACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTSPRYP*PGWDWE Trigger: TTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGA...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTATGTCCACGGGCTGCTaGAAGACGGAGCTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASMSTGC*KTELCS Trigger: TGAGCACAGCTCCGTCTTCCAGCAGCCCGTGGACAT...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTTCTGGGGTTCCTTCTTaGTCCTGGTGGTGGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASSGVPS*SWWWGY Trigger: ATAGCCCCACCACCAGGATCAAGAAGGAACCCCAGA...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATTCTGGGGTTCCTTCTTaGTCCTGGTGGTGGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHCLSRRLWLAAESGQEYSGVPS*SWWWGY Trigger: ATAGCCCCACCACCAGGATCAAGAAGGAACCCCAGA...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCGGGGGCGGGGGACTTaGTGGCGATTTGTCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEAEALLRSGIRGKGGIRRGRGT*WRFVWG Trigger: CCCCCAGACAAATCGCCATCAAGTCCCCCGCCCCCG...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAACTGTGTCCTCCTCACTaGCTGGCCGGTCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQLCPPH*LAGQTQ Trigger: CTGAGTTTGACCGGCCAGTCAGTGAGGAGGACACAG...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | AGTCTGGCCAGGAGTATCAGATGGGATAGTGGAGCTCTGACCCCAGAGACTTCTCTGTGTCCTCCTCACTaGCTGGCCGGTCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLARSIRWDSGALTPETSLCPPH*LAGQTQ Trigger: CTGAGTTTGACCGGCCAGTCAGTGAGGAGGACACAG...AGAAGTCTCTGGGGTCAGAGCTCCACTATCCCATCTGATACTCCTGGCCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR TCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTGCGGAGCGGGGCCAGTaGGTTCTGGGAGGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGIAERGQ*VLGGRQ Trigger: CTGCCTACCTCCCAGAACTCACTGGCCCCGCTCCGC...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCTCCATGAGCTTTCCCTaGGGGACCATCAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTSMSFP*GTISAS Trigger: CGAAGCGCTGATGGTCCCGCAGGGAAAGCTCATGGA...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCCGGTACCTGAGCTTCTaGGAGCCACGTCTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTRYLSF*EPRLLE Trigger: TTCCAAGAGACGTGGCTCGCAGAAGCTCAGGTACCG...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATCTCAGGAGGCTCTGCTaGTGTTCTGCCCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHCLSRRLWLAAESGQEYLRRLC*CSALEK Trigger: CTTTTCCAGGGCAGAACAGCAGCAGAGCCTCCTGAG...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAAGCTCTCAGGAGGCTCTaGTGCTGTTCTGCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQALRRL*CCSALE Trigger: TTCCAGGGCAGAACAGCAGCAGAGCCTCCTGAGAGC...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCTGGAAGACGGAGCTGTaGTCACCAAGGTACCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTWKTEL*SPRYPW Trigger: CCACGGGTACCTTGGTGAGCACAGCTCCGTCTTCCA...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATATGGAAGACGGAGCTGTaGTCACCAAGGTACCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERGDTGCSENPLGPVAIIWKTEL*SPRYPW Trigger: CCACGGGTACCTTGGTGAGCACAGCTCCGTCTTCCA...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGGGTCATGGTACTCCTaGTTGAAGTTCTGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTGSWYS*LKFCWG Trigger: CCCCCAGCAGAACTTCAAGCAGGAGTACCATGACCC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATGCCCCTGGGTACCTGTaGCCACTGACCCCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNAPGYL*PLTPPW Trigger: CCAGGGTGGGGTCAGTGGGCACAGGTACCCAGGGGC...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCAGGGCCACCAGAAACTaGCACAGTTGTAAGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLRATRN*HSCKAP Trigger: GGGTGCCTTACAACTGTGGCAGTTTCTGGTGGCCCT...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR GCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTAGGGCCACCAGAAACTaGCACAGTTGTAAGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASRATRN*HSCKAP Trigger: GGGTGCCTTACAACTGTGGCAGTTTCTGGTGGCCCT...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGGACTGGGAAGAGCTaGAGGCTCTCAGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELGTGKS*RLSGGS Trigger: AGAGCCTCCTGAGAGCCTCCAGCTCTTCCCAGTCCC...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCGGAGATGTGAAGGAGTaGCACATGTCCACGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTGDVKE*HMSTGC Trigger: GCAGCCCGTGGACATGTGCCACTCCTTCACATCTCC...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCAAATCACTGCTGGGGGTAGGGTaGGCAGGGCTCCGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPETSTGIRKRAFTNTKSLLGVG*AGLRQL Trigger: CAACTGTCGGAGCCCTGCCCACCCTACCCCCAGCAG...TGATTTGGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGTCCTCCTCACTGACTaGCCGGTCAAACTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTVLLTD*PVKLSL Trigger: AAGGCTGAGTTTGACCGGCCAGTCAGTGAGGAGGAC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGGGCCAGTGAGTTCTaGGAGGTAGGCAGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELGASEF*EVGRTL Trigger: GAGAGTCCTGCCTACCTCCCAGAACTCACTGGCCCC...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| 3UTR CAA 72 bp | ATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTaGGCCTCTGAGCAAGACCTAGGCAGAGGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IEHWISVVGVRN*ASEQDLGRGQA Trigger: AGCTTGGCCTCTGCCTAGGTCTTGCTCAGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCCACGTCTCTTGGAAGTaGCTGAGGTCCTGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLHVSWK*LRSWKR Trigger: TCTCTTCCAGGACCTCAGTCACTTCCAAGAGACGTG...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCCCTGAGGAGATGTaGAGGAGTGGCACATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCPQNRTLDLCGGGEELGLPEEM*RSGTCP Trigger: TGGACATGTGCCACTCCTTCACATCTCCTCAGGGAG...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGCCAGGAGTATCAGATGGGATAGTGGAGCTCTGACCCCAGAGACTTCTCTCCCTGAGGAGATGTaGAGGAGTGGCACATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLARSIRWDSGALTPETSLPEEM*RSGTCP Trigger: TGGACATGTGCCACTCCTTCACATCTCCTCAGGGAG...AGAAGTCTCTGGGGTCAGAGCTCCACTATCCCATCTGATACTCCTGGCCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAACGGTACCTGAGCTTCTaGGAGCCACGTCTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQRYLSF*EPRLLE Trigger: TTCCAAGAGACGTGGCTCGCAGAAGCTCAGGTACCG...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAACTCAGGAGGCTCTGCTaGTGTTCTGCCCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQLRRLC*CSALEK Trigger: CTTTTCCAGGGCAGAACAGCAGCAGAGCCTCCTGAG...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATCTGTGCGGGGACTCTaGGGTTCCTTCTTGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQSVRGL*GSFLIL Trigger: CAGGATCAAGAAGGAACCCCAGAGTCCCCGCACAGA...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATATCTGTGCGGGGACTCTaGGGTTCCTTCTTGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERGDTGCSENPLGPVAIISVRGL*GSFLIL Trigger: CAGGATCAAGAAGGAACCCCAGAGTCCCCGCACAGA...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGGGGACTGGGAAGAGCTaGAGGCTCTCAGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEALLRSGIRGKGGIRPGGTGKS*RLSGGS Trigger: AGAGCCTCCTGAGAGCCTCCAGCTCTTCCCAGTCCC...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTGTGTTGATAGGGGGCTaGGAGAGGTTCCCGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGIVLIGG*ERFPAP Trigger: GGGGGCCGGGAACCTCTCCCAGCCCCCTATCAACAC...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGGATACCCCAGAGCCTaGCAACCTCTTCAGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTGYPRA*QPLQVQ Trigger: TTGAACCTGAAGAGGTTGCCAGGCTCTGGGGTATCC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAAGTCCTCCTCACTGACTaGCCGGTCAAACTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQVLLTD*PVKLSL Trigger: AAGGCTGAGTTTGACCGGCCAGTCAGTGAGGAGGAC...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTCTCCCTGAGGAGATGTaGAGGAGTGGCACATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELLPEEM*RSGTCP Trigger: TGGACATGTGCCACTCCTTCACATCTCCTCAGGGAG...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTAGGGCCACCAGAAACTaGCACAGTTGTAAGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELRATRN*HSCKAP Trigger: GGGTGCCTTACAACTGTGGCAGTTTCTGGTGGCCCT...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTGGCCAGGGTGGGACTaGGAAGAGCTGGAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNWPGWD*EELEAL Trigger: GAGAGCCTCCAGCTCTTCCCAGTCCCACCCTGGCCA...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGATGTCCACGGGCTGCTaGAAGACGGAGCTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AEALLRSGIRGKGGIRPGMSTGC*KTELCS Trigger: TGAGCACAGCTCCGTCTTCCAGCAGCCCGTGGACAT...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGGGAGATGTGAAGGAGTaGCACATGTCCACGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AEALLRSGIRGKGGIRPGGDVKE*HMSTGC Trigger: GCAGCCCGTGGACATGTGCCACTCCTTCACATCTCC...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCGAGAAGCCCTCTGGGTaGAGGTACATTGATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLEKPSG*RYIDAH Trigger: ATGTGCATCAATGTACCTCCACCCAGAGGGCTTCTC...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGAAATGAGCATTTGTTaGGTCATCCAGCAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGALTPETSTGIRKRAFTEMSIC*VIQQGH Trigger: GTGGCCCTGCTGGATGACCCAACAAATGCTCATTTC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCGGATACCCCAGAGCCTaGCAACCTCTTCAGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCPQNRTLDLCGGGEELGGYPRA*QPLQVQ Trigger: TTGAACCTGAAGAGGTTGCCAGGCTCTGGGGTATCC...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTCACGTCTCTTGGAAGTaGCTGAGGTCCTGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELHVSWK*LRSWKR Trigger: TCTCTTCCAGGACCTCAGTCACTTCCAAGAGACGTG...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGTCACTGTCCGGTACCTaGGCTTCTGCGAGCCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GEAEALLRSGIRGKGGIRSLSGT*ASASHV Trigger: GACGTGGCTCGCAGAAGCTCAGGTACCGGACAGTGA...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTTGGGTGGAGGTACATTaGTGCACATCCAGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELWVEVH*CTSRDI Trigger: GATGTCCCTGGATGTGCATCAATGTACCTCCACCCA...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCAAATCATGGAAGACGGAGCTGTaGTCACCAAGGTACCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPETSTGIRKRAFTNTKSWKTEL*SPRYPW Trigger: CCACGGGTACCTTGGTGAGCACAGCTCCGTCTTCCA...TGATTTGGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTTCACCAAGGTACCCGTaGCCAGGGTGGGACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGISPRYP*PGWDWE Trigger: TTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGA...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCGAGAAGCCCTCTGGGTaGAGGTACATTGATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTEKPSG*RYIDAH Trigger: ATGTGCATCAATGTACCTCCACCCAGAGGGCTTCTC...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAGAGAAGCCCTCTGGGTaGAGGTACATTGATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ERGDTGCSENPLGPVAIIEKPSG*RYIDAH Trigger: ATGTGCATCAATGTACCTCCACCCAGAGGGCTTCTC...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CCA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCGAAATGAGCATTTGTTaGGTCATCCAGCAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCPQNRTLDLCGGGEELGEMSIC*VIQQGH Trigger: GTGGCCCTGCTGGATGACCCAACAAATGCTCATTTC...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAGAAATGAGCATTTGTTaGGTCATCCAGCAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERGDTGCSENPLGPVAIIEMSIC*VIQQGH Trigger: GTGGCCCTGCTGGATGACCCAACAAATGCTCATTTC...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTTGGACGTTGATTATCTaGGAAGGCCAGAGAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASWTLII*EGQREQ Trigger: CTGTTCTCTCTGGCCTTCCCAGATAATCAACGTCCA...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTGGACGTTGATTATCTaGGAAGGCCAGAGAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLWTLII*EGQREQ Trigger: CTGTTCTCTCTGGCCTTCCCAGATAATCAACGTCCA...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGTGGGTGGAGGTACATTaGTGCACATCCAGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: AEALLRSGIRGKGGIRPGWVEVH*CTSRDI Trigger: GATGTCCCTGGATGTGCATCAATGTACCTCCACCCA...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCGTCCAAGCAATGAAATaGGCATTTGTTGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLVQAMK*AFVGSS Trigger: GGATGACCCAACAAATGCTCATTTCATTGCTTGGAC...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCTGTCCAAGCAATGAAATaGGCATTTGTTGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRIEHWISVVGVRNLASVQAMK*AFVGSS Trigger: GGATGACCCAACAAATGCTCATTTCATTGCTTGGAC...AGAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCGGCCTGTCCAAGCAATaGAATGAGCATTTGTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCPQNRTLDLCGGGEELGGLSKQ*NEHLLG Trigger: ACCCAACAAATGCTCATTTCATTGCTTGGACAGGCC...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATGCTCTCAGGAGGCTCTaGTGCTGTTCTGCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNALRRL*CCSALE Trigger: TTCCAGGGCAGAACAGCAGCAGAGCCTCCTGAGAGC...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGATGTCCACGGGCTGCTaGAAGACGGAGCTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEAEALLRSGIRGKGGIRMSTGC*KTELCS Trigger: TGAGCACAGCTCCGTCTTCCAGCAGCCCGTGGACAT...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTGGAGATGTGAAGGAGTaGCACATGTCCACGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGIGDVKE*HMSTGC Trigger: GCAGCCCGTGGACATGTGCCACTCCTTCACATCTCC...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCTGGACGTTGATTATCTaGGAAGGCCAGAGAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VCPQNRTLDLCGGGEELGWTLII*EGQREQ Trigger: CTGTTCTCTCTGGCCTTCCCAGATAATCAACGTCCA...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTGGTGGTGGGGCTATaGAAAGAGTTTTCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VCPQNRTLDLCGGGEELGLVVGL*KEFSEW Trigger: CCATTCAGAAAACTCTTTCCATAGCCCCACCACCAG...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCAAATCACACGTCTCTTGGAAGTaGCTGAGGTCCTGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPETSTGIRKRAFTNTKSHVSWK*LRSWKR Trigger: TCTCTTCCAGGACCTCAGTCACTTCCAAGAGACGTG...TGATTTGGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGTCTGGGGTTCCTTCTTaGTCCTGGTGGTGGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GEAEALLRSGIRGKGGIRSGVPS*SWWWGY Trigger: ATAGCCCCACCACCAGGATCAAGAAGGAACCCCAGA...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAAGTCCAAGCAATGAAATaGGCATTTGTTGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQVQAMK*AFVGSS Trigger: GGATGACCCAACAAATGCTCATTTCATTGCTTGGAC...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAAACAAGTTCAGAGCTGGACGTTaGTTATCTGGGAAGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDTGCSENPLGPVAIINKFRAGR*LSGKAR Trigger: TCTGGCCTTCCCAGATAATCAACGTCCAGCTCTGAA...CTTGTTTATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGTTCAGAGCTGGACGTTaGTTATCTGGGAAGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEALLRSGIRGKGGIRPGFRAGR*LSGKAR Trigger: TCTGGCCTTCCCAGATAATCAACGTCCAGCTCTGAA...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCAAATCAGGAACAAACTaGTCATCACTGTCCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTKSGTN*SSLSGT Trigger: GGTACCGGACAGTGATGAGCAGTTTGTTCCTGATTT...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTCTCAGGAGGCTCTGCTaGTGTTCTGCCCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGILRRLC*CSALEK Trigger: CTTTTCCAGGGCAGAACAGCAGCAGAGCCTCCTGAG...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATGGGTCATGGTACTCCTaGTTGAAGTTCTGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNGSWYS*LKFCWG Trigger: CCCCCAGCAGAACTTCAAGCAGGAGTACCATGACCC...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCGCTCCAATCCCTTCCTaGTTGATGTCTCCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALTPETSTGIRKRAFTNTAPIPS*LMSPSN Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGATTGGAGC...GGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCAATGCAGACATCATCTaGGAATGGTCGAAGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: CPQNRTLDLCGGGEELGLNADII*EWSKGF Trigger: AAATCCCTTCGACCATTCCCAGATGATGTCTGCATT...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCAAATCAGGATACCCCAGAGCCTaGCAACCTCTTCAGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPETSTGIRKRAFTNTKSGYPRA*QPLQVQ Trigger: TTGAACCTGAAGAGGTTGCCAGGCTCTGGGGTATCC...TGATTTGGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTGTCCTCCTCACTGACTaGCCGGTCAAACTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGIVLLTD*PVKLSL Trigger: AAGGCTGAGTTTGACCGGCCAGTCAGTGAGGAGGAC...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR TCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTTGGGTGGAGGTACATTaGTGCACATCCAGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGIWVEVH*CTSRDI Trigger: GATGTCCCTGGATGTGCATCAATGTACCTCCACCCA...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTAAATCAGGAACAAACTaGTCATCACTGTCCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELKSGTN*SSLSGT Trigger: GGTACCGGACAGTGATGAGCAGTTTGTTCCTGATTT...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGCTGGTGGTGGGGCTATaGAAAGCTAAGTTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AEALLRSGIRGKGGIRPGLVVGL*KAKFSE Trigger: TTCAGAAAACTTAGCTTTCCATAGCCCCACCACCAG...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 |
||
| CDS-3UTR TCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTGGCCTGTCCAAGCAATaGAATGAGCATTTGTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGIGLSKQ*NEHLLG Trigger: ACCCAACAAATGCTCATTTCATTGCTTGGACAGGCC...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCAAATCAAAATCAGGAACAAACTaGTCATCACTGTCCGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TPETSTGIRKRAFTNTKSKSGTN*SSLSGT Trigger: GGTACCGGACAGTGATGAGCAGTTTGTTCCTGATTT...TGATTTGGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTATTTTTCAGGGACAATaGAGACATCATCTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELIFQGQ*RHHLGM Trigger: CATTCCCAGATGATGTCTGCATTGTCCCTGAAAAAT...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGACATCATCTGGGAATaGTCGAAGGGATTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PVCPQNRTLDLCGGGEELDIIWE*SKGFFI Trigger: TATGAAAAATCCCTTCGACCATTCCCAGATGATGTC...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGATTTTTCAGGGACAATaGAGACATCATCTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AEALLRSGIRGKGGIRPGIFQGQ*RHHLGM Trigger: CATTCCCAGATGATGTCTGCATTGTCCCTGAAAAAT...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATGCTCCAATCCCTTCCTaGTTGATGTCTCCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNAPIPS*LMSPSN Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGATTGGAGC...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTCTGGTGGTGGGGCTATaGAAAGCTAAGTTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGILVVGL*KAKFSE Trigger: TTCAGAAAACTTAGCTTTCCATAGCCCCACCACCAG...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAATGCAGACATCATCTaGGAATGGTCGAAGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TGEAEALLRSGIRGKGGINADII*EWSKGF Trigger: AAATCCCTTCGACCATTCCCAGATGATGTCTGCATT...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGAATGCAGACATCATCTaGGAATGGTCGAAGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GEAEALLRSGIRGKGGIRNADII*EWSKGF Trigger: AAATCCCTTCGACCATTCCCAGATGATGTCTGCATT...CCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR GCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATATTTTTCAGGGACAATaGAGACATCATCTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNIFQGQ*RHHLGM Trigger: CATTCCCAGATGATGTCTGCATTGTCCCTGAAAAAT...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CCA 90 bp | AACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATGACATCATCTGGGAATaGTCGAAGGGATTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NRRSRGFIKVWHKRQRWNDIIWE*SKGFFI Trigger: TATGAAAAATCCCTTCGACCATTCCCAGATGATGTC...ATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS GCA 90 bp | TCTGAGTCGGAAGGCGGCAGGGAGCCCGGGTCCATGAGCTTTCCCTaGGGGACCATCAGCGCTTCGCCCAAGCTCCCATTTCCGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SESEGGREPGSMSFP*GTISASPKLPFPGD Trigger: ATCTCCCGGAAATGGGAGCTTGGGCGAAGCGCTGATGGTCCCGCAGGGAAAGCTCATGGACCCGGGCTCCCTGCCGCCTTCCGACTCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS TCA 90 bp | GGAAGAGATCTTCTGAGTCGGAAGGCGGCAGGGAGCCCGGGTCCATaGGCTTTCCCTGCGGGACCATCAGCGCTTCGCCCAAGCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRDLLSRKAAGSPGP*AFPAGPSALRPSSH Trigger: ATGGGAGCTTGGGCGAAGCGCTGATGGTCCCGCAGGGAAAGCTCATGGACCCGGGCTCCCTGCCGCCTTCCGACTCAGAAGATCTCTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS CCA 90 bp | AAGACGGAGCTGTGCTCACCAAGGTACCCGTGGCCAGGGTGGGACTaGGAAGAGCTGGAGGCTCTCAGGAGGCTCTGCTGCTGTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTELCSPRYPWPGWD*EELEALRRLCCCSA Trigger: GGCAGAACAGCAGCAGAGCCTCCTGAGAGCCTCCAGCTCTTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGAGCACAGCTCCGTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS CCA 90 bp | TGCTGGAAGACGGAGCTGTGCTCACCAAGGTACCCGTGGCCAGGGTaGGACTGGGAAGAGCTGGAGGCTCTCAGGAGGCTCTGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CWKTELCSPRYPWPG*DWEELEALRRLCCC Trigger: ACAGCAGCAGAGCCTCCTGAGAGCCTCCAGCTCTTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGAGCACAGCTCCGTCTTCCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATCCGGGGGCGGGGGACTaGATGGCGATTTGTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHCLSRRLWLAAESGQEYPGAGD*MAICLG Trigger: CCCCAGACAAATCGCCATCAAGTCCCCCGCCCCCGG...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000164750.8 |
||
| CDS CCA 90 bp | ATATCCACCTCTGTGGCCGAAGGGCGGAGCGGGGCCAGTGAGTTCTaGGAGGTAGGCAGGACTCTCATCCAAGTGGGACAAAGGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISTSVAEGRSGASEF*EVGRTLIQVGQRDC Trigger: ACAGTCCCTTTGTCCCACTTGGATGAGAGTCCTGCCTACCTCCCAGAACTCACTGGCCCCGCTCCGCCCTTCGGCCACAGAGGTGGATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTGGCCAGGAGTATCAGATGGGATAGTGGAGCTCTGACCCCAGAGACTTCTCCGGGGGCGGGGGACTaGATGGCGATTTGTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLARSIRWDSGALTPETSPGAGD*MAICLG Trigger: CCCCAGACAAATCGCCATCAAGTCCCCCGCCCCCGG...AGAAGTCTCTGGGGTCAGAGCTCCACTATCCCATCTGATACTCCTGGCCAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCCCGGGGGCGGGGGACTaGATGGCGATTTGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CPQNRTLDLCGGGEELGLPGAGD*MAICLE Trigger: CTCCAGACAAATCGCCATCAAGTCCCCCGCCCCCGG...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000107176.8 |
||
| CDS TCA 90 bp | TGTCCGGTACCTGAGCTTCTGCGAGCCACGTCTCTTGGAAGTGACTaGGGTCCTGGAAGAGATCTTCTGAGTCGGAAGGCGGCAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPVPELLRATSLGSD*GPGRDLLSRKAAGS Trigger: GCTCCCTGCCGCCTTCCGACTCAGAAGATCTCTTCCAGGACCTCAGTCACTTCCAAGAGACGTGGCTCGCAGAAGCTCAGGTACCGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATGCAGGGCTCCGACAGTaGGTGTTGATAGGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHCLSRRLWLAAESGQEYAGLRQ*VLIGGW Trigger: CCAGCCCCCTATCAACACCAACTGTCGGAGCCCTGC...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS TCA 90 bp | AGTAAGAATATCCACCTCTGTGGCCGAAGGGCGGAGCGGGGCCAGTaGGTTCTGGGAGGTAGGCAGGACTCTCATCCAAGTGGGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKNIHLCGRRAERGQ*VLGGRQDSHPSGTK Trigger: CTTTGTCCCACTTGGATGAGAGTCCTGCCTACCTCCCAGAACTCACTGGCCCCGCTCCGCCCTTCGGCCACAGAGGTGGATATTCTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAGCAGGGCTCCGACAGTaGGTGTTGATAGGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERGDTGCSENPLGPVAIIAGLRQ*VLIGGW Trigger: CCAGCCCCCTATCAACACCAACTGTCGGAGCCCTGC...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATGCGAGCCACGTCTCTaGGAAGTGACTGAGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSSDPRDFYRHQKEGLHQCEPRL*EVTEVL Trigger: CAGGACCTCAGTCACTTCCAAGAGACGTGGCTCGCA...TTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | GGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAAACAAGGCAGGGCTCCGACAGTaGGTGTTGATAGGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDTGCSENPLGPVAIINKAGLRQ*VLIGGW Trigger: CCAGCCCCCTATCAACACCAACTGTCGGAGCCCTGC...CTTGTTTATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGGGAGACACAGGGTGTTCTGAGAATCCCCTTGGCCCTGTTGCCATAATAGGACTTGATGGCGATTaGTCTGGGGGAGTCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ERGDTGCSENPLGPVAIIGLDGD*SGGVIG Trigger: GCCTATGACTCCCCCAGACAAATCGCCATCAAGTCC...TATTATGGCAACAGGGCCAAGGGGATTCTCAGAACACCCTGTGTCTCCCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATCTTCAGAGCTGGACGTaGATTATCTGGGAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHCLSRRLWLAAESGQEYLQSWT*IIWEGQ Trigger: CTGGCCTTCCCAGATAATCAACGTCCAGCTCTGAAG...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCTCCTTCAGAGCTGGACGTaGATTATCTGGGAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPQNRTLDLCGGGEELGLLQSWT*IIWEGQ Trigger: CTGGCCTTCCCAGATAATCAACGTCCAGCTCTGAAG...GAGGCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGTGCGAGCCACGTCTCTaGGAAGTGACTGAGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEALLRSGIRGKGGIRPGCEPRL*EVTEVL Trigger: CAGGACCTCAGTCACTTCCAAGAGACGTGGCTCGCA...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGCTCTGACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCGGACTTGATGGCGATTaGTCTGGAGTAAAGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGALTPETSTGIRKRAFTGLDGD*SGVKAL Trigger: CAGTGCCTTTACTCCAGACAAATCGCCATCAAGTCC...GGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGTCAGAGCTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107176.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTAGGCCTGGGGGACTTGATGGCGATTaGTCTGGGGGAGTCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEALLRSGIRGKGGIRPGGLDGD*SGGVIG Trigger: GCCTATGACTCCCCCAGACAAATCGCCATCAAGTCC...CCCAGGCCTAATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017868.7 ENSMUST00000164750.8 |
||
| CDS-3UTR CAA 90 bp | ACCGGAGAAGCAGAGGCTTTATTAAGGTCTGGCATAAGAGGCAAAGGTGGAATTTGCGAGCCACGTCTCTaGGAAGTGACTGAGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TGEAEALLRSGIRGKGGICEPRL*EVTEVL Trigger: CAGGACCTCAGTCACTTCCAAGAGACGTGGCTCGCA...AATTCCACCTTTGCCTCTTATGCCAGACCTTAATAAAGCCTCTGCTTCTCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CAA 90 bp | CTCCACTGTCTTTCCCGCAGACTCTGGTTAGCAGCTGAGTCTGGCCAGGAGTATCCAATCCCTTCCTGCTaGATGTCTCCTTCAAATTTT | + |
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Preference number: 5 (lower is better) Translates to: LHCLSRRLWLAAESGQEYPIPSC*MSPSNF Trigger: AAAATTTGAAGGAGACATCAAGCAGGAAGGGATTGG...ATACTCCTGGCCAGACTCAGCTGCTAACCAGAGTCTGCGGGAAAGACAGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CAA 90 bp | ACCCCAGAGACTTCTACAGGCATCAGAAAGAGGGCCTTCACCAATACCAAATCACTTCAGAGCTGGACGTaGATTATCTGGGAAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TPETSTGIRKRAFTNTKSLQSWT*IIWEGQ Trigger: CTGGCCTTCCCAGATAATCAACGTCCAGCTCTGAAG...TGATTTGGTATTGGTGAAGGCCCTCTTTCTGATGCCTGTAGAAGTCTCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CAA 90 bp | GTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTGGCCCAATCCCTTCCTGCTaGATGTCTCCTTCAAATTTT | + |
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Preference number: 5 (lower is better) Translates to: VCPQNRTLDLCGGGEELGPIPSC*MSPSNF Trigger: AAAATTTGAAGGAGACATCAAGCAGGAAGGGATTGG...GCCAAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS-3UTR CAA 90 bp | CCTGTATGTCCCCAGAATAGAACACTGGATCTCTGTGGTGGGGGTGAGGAACTTCCAATCCCTTCCTGCTaGATGTCTCCTTCAAATTTT | + |
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Preference number: 5 (lower is better) Translates to: PVCPQNRTLDLCGGGEELPIPSC*MSPSNF Trigger: AAAATTTGAAGGAGACATCAAGCAGGAAGGGATTGG...AAGTTCCTCACCCCCACCACAGAGATCCAGTGTTCTATTCTGGGGACATACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS CCA 90 bp | CTTGATGTCTCCTTCAAATTTTTCAGGGACAATGCAGACATCATCTaGGAATGGTCGAAGGGATTTTTCATAGCCATAACCCATCACTCC | + |
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Preference number: 5 (lower is better) Translates to: LDVSFKFFRDNADII*EWSKGFFIAITHHS Trigger: GGAGTGATGGGTTATGGCTATGAAAAATCCCTTCGACCATTCCCAGATGATGTCTGCATTGTCCCTGAAAAATTTGAAGGAGACATCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS TCA 72 bp | CTTCTGAGTCGGAAGGCGGCAGGGAGCCCGGGTCCATaGGCTTTCCCTGCGGGACCATCAGCGCTTCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLSRKAAGSPGP*AFPAGPSALRP Trigger: TGGGCGAAGCGCTGATGGTCCCGCAGGGAAAGCTCATGGACCCGGGCTCCCTGCCGCCTTCCGACTCAGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS GCA 72 bp | GAAGGCGGCAGGGAGCCCGGGTCCATGAGCTTTCCCTaGGGGACCATCAGCGCTTCGCCCAAGCTCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: EGGREPGSMSFP*GTISASPKLPF Trigger: AAATGGGAGCTTGGGCGAAGCGCTGATGGTCCCGCAGGGAAAGCTCATGGACCCGGGCTCCCTGCCGCCTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS CCA 72 bp | TGGGCAGGGCTCCGACAGTTGGTGTTGATAGGGGGCTaGGAGAGGTTCCCGGCCCCCTCCCTGAGGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: WAGLRQLVLIGG*ERFPAPSLRRC Trigger: ACATCTCCTCAGGGAGGGGGCCGGGAACCTCTCCCAGCCCCCTATCAACACCAACTGTCGGAGCCCTGCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS CCA 72 bp | CTGTGCCCACTGACCCCACCCTGGCTTGAAGCGGGCTaGCCAGCCTGTTCGTACAGGGGGTCATGGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: LCPLTPPWLEAG*PACSYRGSWYS Trigger: GGAGTACCATGACCCCCTGTACGAACAGGCTGGCCAGCCCGCTTCAAGCCAGGGTGGGGTCAGTGGGCACAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS CCA 72 bp | TGCTGGAAGACGGAGCTGTGCTCACCAAGGTACCCGTaGCCAGGGTGGGACTGGGAAGAGCTGGAGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: CWKTELCSPRYP*PGWDWEELEAL Trigger: GAGAGCCTCCAGCTCTTCCCAGTCCCACCCTGGCCACGGGTACCTTGGTGAGCACAGCTCCGTCTTCCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS TCA 72 bp | CATCTGAGTCGTAGGCGAAGTCTGTGCGCTCCTGTTTaGTCACCACCCCCGCCCCTGGGTACCTGTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: HLSRRRSLCAPV*SPPPPLGTCAH Trigger: GTGGGCACAGGTACCCAGGGGCGGGGGTGGTGATCAAACAGGAGCGCACAGACTTCGCCTACGACTCAGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS CCA 72 bp | GGAGATGTGAAGGAGTGGCACATGTCCACGGGCTGCTaGAAGACGGAGCTGTGCTCACCAAGGTACCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: GDVKEWHMSTGC*KTELCSPRYPW Trigger: CCACGGGTACCTTGGTGAGCACAGCTCCGTCTTCCAGCAGCCCGTGGACATGTGCCACTCCTTCACATCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS CAA 90 bp | CATCACCTGGAGAGGGTCCAGAGAAGCCCTCTGGGTGGAGGTACATaGATGCACATCCAGGGACATCTGAGTCGTAGGCGAAGTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: HHLERVQRSPLGGGT*MHIQGHLSRRRSLC Trigger: GCACAGACTTCGCCTACGACTCAGATGTCCCTGGATGTGCATCAATGTACCTCCACCCAGAGGGCTTCTCTGGACCCTCTCCAGGTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS TCA 72 bp | CCTGAGCTTCTGCGAGCCACGTCTCTTGGAAGTGACTaGGGTCCTGGAAGAGATCTTCTGAGTCGGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: PELLRATSLGSD*GPGRDLLSRKA Trigger: CGCCTTCCGACTCAGAAGATCTCTTCCAGGACCTCAGTCACTTCCAAGAGACGTGGCTCGCAGAAGCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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| CDS CCA 72 bp | CCATCACCTGGAGAGGGTCCAGAGAAGCCCTCTGGGTaGAGGTACATTGATGCACATCCAGGGACATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSPGEGPEKPSG*RYIDAHPGTSE Trigger: CTCAGATGTCCCTGGATGTGCATCAATGTACCTCCACCCAGAGGGCTTCTCTGGACCCTCTCCAGGTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017868.7 ENSMUST00000107176.8 ENSMUST00000164750.8 |
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