Pregenerated sensors for ETV3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000118505Ensembl transcript IDs: ENSMUST00000238853.2, ENSMUST00000238894.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGTATGGGAAGGGCTGTaGGAGGTCCTGGGAAACCTTAGCCAGGATGGGGAAGTGAACCCA | + |
|
Preference number: 1 (lower is better) Translates to: WLCSQGEGREVWEGL*EVLGNLSQDGEVNP Trigger: TGGGTTCACTTCCCCATCCTGGCTAAGGTTTCCCAGGACCTCTCACAGCCCTTCCCATACTTCTCTGCCCTCCCCTTGACTGCACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| 3UTR GCA 90 bp | GCAGTGGAGTGTTACAGAGATGAGAGAACCACCCCTCCCTCTCTGTaGCCCTGCCTGCATCTTGGGGTCATGGAGATAGAAGCACAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: AVECYRDERTTPPSL*PCLHLGVMEIEAQN Trigger: GTTCTGTGCTTCTATCTCCATGACCCCAAGATGCAGGCAGGGGCACAGAGAGGGAGGGGTGGTTCTCTCATCTCTGTAACACTCCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| 3UTR TCA 90 bp | AAGGGCTGTGAGAGGTCCTGGGAAACCTTAGCCAGGATGGGGAAGTaGACCCAGAGGAAGAAAGAGATCCTAAGACTTAAGCCAAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: KGCERSWETLARMGK*TQRKKEILRLKPNK Trigger: TTTGTTTGGCTTAAGTCTTAGGATCTCTTTCTTCCTCTGGGTTCACTTCCCCATCCTGGCTAAGGTTTCCCAGGACCTCTCACAGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGCTTCAGAGCCTCCAGTaGGGGAACAGGAGACAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKLQSLQ*GNRRQG Trigger: CCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAG...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGCTTCATCCCCTCCTGTaGGTAGGCAGGGGGCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKLHPLL*VGRGQF Trigger: AAACTGCCCCCTGCCTACTCACAGGAGGGGATGAAG...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTAGTCAGATAGCAATTTaGTATAGGGGAGGGGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: EILRLKPNKRWSAPAQPLSQIAI*YRGGVP Trigger: TGGCACCCCTCCCCTATACCAAATTGCTATCTGACT...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCGCAGCAGGCGAGGGCTaGGGGGTGCCCACACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPAAGEG*GVPTLS Trigger: GGAAAGTGTGGGCACCCCCCAGCCCTCGCCTGCTGC...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCCAGCAGCAAGGCCTCTaGCAGCCTGGGCCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPQQQGL*QPGPRT Trigger: TGTCCTGGGCCCAGGCTGGCAGAGGCCTTGCTGCTG...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCAGCAGCAAGGCCTCTaGCAGCCTGGGCCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHPSEPPVGEQETGGRATQQQGL*QPGPRT Trigger: TGTCCTGGGCCCAGGCTGGCAGAGGCCTTGCTGCTG...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCAAGGGGAGCAGGGCTaGGCAGGCCACCTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHPSEPPVGEQETGGRATQGEQG*AGHLGG Trigger: ACCTCCAAGGTGGCCTGCCCAGCCCTGCTCCCCTTG...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCATAGGCACCAAGGGCTaGCACAGGGCAGGGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHPSEPPVGEQETGGRATIGTKG*HRAGDL Trigger: GAGGTCCCCTGCCCTGTGTCAGCCCTTGGTGCCTAT...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCATAGGCACCAAGGGCTaGCACAGGGCAGGGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPIGTKG*HRAGDL Trigger: GAGGTCCCCTGCCCTGTGTCAGCCCTTGGTGCCTAT...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCCATACACATGGGGCCTaGGAGCCGAGGACCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPHTHGA*EPRTRL Trigger: AAGCCTGGTCCTCGGCTCTCAGGCCCCATGTGTATG...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCGGTCCTCTCTCCAGCTaGCTGAGTTTCTGTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPGPLSS*LSFCGP Trigger: CGGGCCACAGAAACTCAGCCAGCTGGAGAGAGGACC...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCTCGGGCCTGAGAAACTaGCACCAAAGCCCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHPSEPPVGEQETGGRATSGLRN*HQSPWP Trigger: TGGCCAGGGGCTTTGGTGCCAGTTTCTCAGGCCCGA...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCCAGGGGCAGCCAGGATaGCTTCTGAGAAGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPQGQPG*LLRSSC Trigger: GCAACTGCTTCTCAGAAGGCATCCTGGCTGCCCCTG...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGCTGAGACCCAGTGGTTaGCAGGGGCAGCCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HAHICPWFNFTLQSLQWGLRPSG*QGQPGC Trigger: GCATCCTGGCTGCCCCTGTCAACCACTGGGTCTCAG...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCTCATTGGAATCCAGATaGCTGCTTGGCCCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHPSEPPVGEQETGGRATSLESR*LLGPGP Trigger: TGGCCCAGGGCCAAGCAGGCATCTGGATTCCAATGA...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGCAGCAGGCGAGGGCTaGGGGGTGCCCACACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPMPTFALGSTSPFRASSAAGEG*GVPTLS Trigger: GGAAAGTGTGGGCACCCCCCAGCCCTCGCCTGCTGC...ACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAAGAGGAGGCAAGATaGGCCCCAAGAGGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTLPGTEVPSGCAVKGRAEEEAR*APRGGS Trigger: GGACCCACCTCTTGGGGCCCATCTTGCCTCCTCTTC...TGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAGGGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCATCCAGATGCCTGCTTaGCCCTGGGCCAGGATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPIQMPA*PWARIY Trigger: GTAAATCCTGGCCCAGGGCCAAGCAGGCATCTGGAT...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCATCCAGATGCCTGCTTaGCCCTGGGCCAGGATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LHPSEPPVGEQETGGRATIQMPA*PWARIY Trigger: GTAAATCCTGGCCCAGGGCCAAGCAGGCATCTGGAT...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTGGGGAAGGCCAGACCTaGGACCCAGTGGTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EILRLKPNKRWSAPAQPLGEGQT*DPVVDR Trigger: CCTGTCAACCACTGGGTCTCAGGTCTGGCCTTCCCC...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGCCAATTCCTCGGGCCTaGGAAACTGGCACCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKPIPRA*ETGTKA Trigger: GGCTTTGGTGCCAGTTTCTCAGGCCCGAGGAATTGG...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGGAGTCCCTGAGTCCCTaGGGAGAGTCCCTCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKESLSP*GESLIG Trigger: TCCAATGAGGGACTCTCCTCAGGGACTCAGGGACTC...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | AAGACCCTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCACAGGGGCAGCCAGGATaGCTTCTGAGAAGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLPGTEVPSGCAVKGRAQGQPG*LLRSSC Trigger: GCAACTGCTTCTCAGAAGGCATCCTGGCTGCCCCTG...TGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAGGGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCTGGAGCCCTGGAAAATaGCAGGTACCTGGCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: LHPSEPPVGEQETGGRATWSPGK*QVPGIH Trigger: GTGTATGCCAGGTACCTGGCATTTTCCAGGGCTCCA...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTCAAGGGGAGCAGGGCTaGGCAGGCCACCTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPMPTFALGSTSPFRASSQGEQG*AGHLGG Trigger: ACCTCCAAGGTGGCCTGCCCAGCCCTGCTCCCCTTG...ACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGATGGGCCCCAAGAGGTaGGTCCAGTTACAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKMGPKR*VQLQQR Trigger: CCTCTGCTGTAACTGGACCCACCTCTTGGGGCCCAT...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGGAAGAGGAGGCAAGATaGGCCCCAAGAGGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HAHICPWFNFTLQSLQWGEEEAR*APRGGS Trigger: GGACCCACCTCTTGGGGCCCATCTTGCCTCCTCTTC...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGTCATTGGAATCCAGATaGCTGCTTGGCCCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKSLESR*LLGPGP Trigger: TGGCCCAGGGCCAAGCAGGCATCTGGATTCCAATGA...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGCTGGCTGAGTTTCTGTaGCCCGTGTGCACAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HAHICPWFNFTLQSLQWGLAEFL*PVCTAC Trigger: GCATGCTGTGCACACGGGCCACAGAAACTCAGCCAG...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGAGCCTGGCCAGAAGGTaGAGCCCTGGAAAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HAHICPWFNFTLQSLQWGSLARR*SPGKCQ Trigger: CTGGCATTTTCCAGGGCTCCACCTTCTGGCCAGGCT...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGTGTTCTGTCTCAGCCTaGCCAGAAGGTGGAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAHICPWFNFTLQSLQWGCSVSA*PEGGAL Trigger: CAGGGCTCCACCTTCTGGCCAGGCTGAGACAGAACA...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATCTCCATTTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCCTGAGACCCAGTGGTTaGCAGGGGCAGCCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CHLHFPMPTFALGSTSPFLRPSG*QGQPGC Trigger: GCATCCTGGCTGCCCCTGTCAACCACTGGGTCTCAG...GAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAAATGGAGATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGTTCCTTTCCCAAGTTTaGGTCCCTGAGTCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKFLSQV*VPESLR Trigger: CCTCAGGGACTCAGGGACTCAAACTTGGGAAAGGAA...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR GCA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTGACCCCGAAAGTGACTaGTCTGAGGGAAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EILRLKPNKRWSAPAQPLDPESD*SEGRGG Trigger: GCCTCCTCTTCCCTCAGAGCAGTCACTTTCGGGGTC...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAAGACCTGAGACCCAGTaGTTGACAGGGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFALGSTSPFRASSGGTGRPETQ*LTGAAR Trigger: CCTGGCTGCCCCTGTCAACCACTGGGTCTCAGGTCT...TCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTATGGGCCCCAAGAGGTaGGTCCAGTTACAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EILRLKPNKRWSAPAQPLMGPKR*VQLQQR Trigger: CCTCTGCTGTAACTGGACCCACCTCTTGGGGCCCAT...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTTGTTCTGTCTCAGCCTaGCCAGAAGGTGGAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EILRLKPNKRWSAPAQPLCSVSA*PEGGAL Trigger: CAGGGCTCCACCTTCTGGCCAGGCTGAGACAGAACA...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| 3UTR CAA 72 bp | GGGAGGGGTGCCATCTCCATTTCCCCATGCCCACATTaGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGAISISPCPH*PLVQLHPSEPP Trigger: TGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAAATGGAGATGGCACCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATCTCCATTTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCCATACACATGGGGCCTaGGAGCCGAGGACCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHLHFPMPTFALGSTSPFHTHGA*EPRTRL Trigger: AAGCCTGGTCCTCGGCTCTCAGGCCCCATGTGTATG...GAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAAATGGAGATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | ACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGAGTCCCTGAGTCCCTaGGGAGAGTCCCTCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFALGSTSPFRASSGGTGESLSP*GESLIG Trigger: TCCAATGAGGGACTCTCCTCAGGGACTCAGGGACTC...TCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTAGCCTGGCCAGAAGGTaGAGCCCTGGAAAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPMPTFALGSTSPFRASSSLARR*SPGKCQ Trigger: CTGGCATTTTCCAGGGCTCCACCTTCTGGCCAGGCT...ACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGAGCCAGGATGCCTTCTaGGAAGCAGTTGCAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: HAHICPWFNFTLQSLQWGSQDAF*EAVAVH Trigger: ATGTACTGCAACTGCTTCTCAGAAGGCATCCTGGCT...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTTGTTGTAGTAATACCTaGGGGCCCGGCTCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EILRLKPNKRWSAPAQPLCCSNT*GPGSAC Trigger: ACAAGCTGAGCCGGGCCCTCAGGTATTACTACAACA...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCACAAAACACTCACAGTTaGAGCTGCTGCTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLPGTEVPSGCAVKGRAQNTHS*SCCSPC Trigger: ACAAGGAGAGCAGCAGCTTCAACTGTGAGTGTTTTG...TGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAGGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATCTCCATTTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCCCAATTCCTCGGGCCTaGGAAACTGGCACCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLHFPMPTFALGSTSPFPIPRA*ETGTKA Trigger: GGCTTTGGTGCCAGTTTCTCAGGCCCGAGGAATTGG...GAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAAATGGAGATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTATGCCTGCTTGGCCCTaGGCCAGGATTTACCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPMPTFALGSTSPFRASSMPAWP*ARIYHQ Trigger: TTGGTGGTAAATCCTGGCCCAGGGCCAAGCAGGCAT...ACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | TGCCATCTCCATTTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCATGCCTGCTTGGCCCTaGGCCAGGATTTACCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CHLHFPMPTFALGSTSPFMPAWP*ARIYHQ Trigger: TTGGTGGTAAATCCTGGCCCAGGGCCAAGCAGGCAT...GAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAAATGGAGATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCATCATGTTCTCTGGATTaGGGGACATGGAGATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLPGTEVPSGCAVKGRASCSLD*GTWRFL Trigger: AAGGAATCTCCATGTCCCCCAATCCAGAGAACATGA...TGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAGGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTAGCCAGGATGCCTTCTaGGAAGCAGTTGCAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FPMPTFALGSTSPFRASSSQDAF*EAVAVH Trigger: ATGTACTGCAACTGCTTCTCAGAAGGCATCCTGGCT...ACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATCTCCATTTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCTTCCTTTCCCAAGTTTaGGTCCCTGAGTCCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CHLHFPMPTFALGSTSPFFLSQV*VPESLR Trigger: CCTCAGGGACTCAGGGACTCAAACTTGGGAAAGGAA...GAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAAATGGAGATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTCAAAACACTCACAGTTaGAGCTGCTGCTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPMPTFALGSTSPFRASSQNTHS*SCCSPC Trigger: ACAAGGAGAGCAGCAGCTTCAACTGTGAGTGTTTTG...ACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS GCA 90 bp | GGGCCTGAGAGCCGAGGACCAGGCTTTGAGGACCCCGAAAGTGACTaGTCTGAGGGAAGAGGAGGCAAGATGGGCCCCAAGAGGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GPESRGPGFEDPESD*SEGRGGKMGPKRWV Trigger: GACCCACCTCTTGGGGCCCATCTTGCCTCCTCTTCCCTCAGAGCAGTCACTTTCGGGGTCCTCAAAGCCTGGTCCTCGGCTCTCAGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCTGTCCCCAGAGGCCTTaGGTGGTCTCTGTGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHPSEPPVGEQETGGRATCPQRP*VVSVGS Trigger: GGACCCCACAGAGACCACCAAAGGCCTCTGGGGACA...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS GCA 90 bp | CTGGGCAGGCCACCTTGGAGGTTCCGGAGACAGCAGCAAGGCCTCTaGCAGCCTGGGCCCAGGACAGAGCCAAAACACTCACAGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGRPPWRFRRQQQGL*QPGPRTEPKHSQLK Trigger: CTTCAACTGTGAGTGTTTTGGCTCTGTCCTGGGCCCAGGCTGGCAGAGGCCTTGCTGCTGTCTCCGGAACCTCCAAGGTGGCCTGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCAAGCTGCTGCTCTCCTaGTCCCCAGAGGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPKLLLS*SPEAFG Trigger: ACCAAAGGCCTCTGGGGACAAGGAGAGCAGCAGCTT...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 90 bp | GCCTCTGCCAGCCTGGGCCCAGGACAGAGCCAAAACACTCACAGTTaGAGCTGCTGCTCTCCTTGTCCCCAGAGGCCTTTGGTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASASLGPGQSQNTHS*SCCSPCPQRPLVVS Trigger: AGAGACCACCAAAGGCCTCTGGGGACAAGGAGAGCAGCAGCTTCAACTGTGAGTGTTTTGGCTCTGTCCTGGGCCCAGGCTGGCAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS GCA 90 bp | CCAGTGTTCTGTCTCAGCCTGGCCAGAAGGTGGAGCCCTGGAAAATaGCAGGTACCTGGCATACACATGGGGCCTGAGAGCCGAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: PVFCLSLARRWSPGK*QVPGIHMGPESRGP Trigger: TGGTCCTCGGCTCTCAGGCCCCATGTGTATGCCAGGTACCTGGCATTTTCCAGGGCTCCACCTTCTGGCCAGGCTGAGACAGAACACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGCCTGAGACCCAGTGGTaGACAGGGGCAGCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HAHICPWFNFTLQSLQWGPETQW*TGAARM Trigger: CATCCTGGCTGCCCCTGTCAACCACTGGGTCTCAGG...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGTGTCCCCAGAGGCCTTaGGTGGTCTCTGTGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HAHICPWFNFTLQSLQWGCPQRP*VVSVGS Trigger: GGACCCCACAGAGACCACCAAAGGCCTCTGGGGACA...CCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCAATCCAGATGCCTGCTaGGCCCTGGGCCAGGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LHPSEPPVGEQETGGRATNPDAC*ALGQDL Trigger: TAAATCCTGGCCCAGGGCCAAGCAGGCATCTGGATT...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 90 bp | CTCACAGTTGAAGCTGCTGCTCTCCTTGTCCCCAGAGGCCTTTGGTaGTCTCTGTGGGGTCCTCTCTCCAGCTGGCTGAGTTTCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTVEAAALLVPRGLW*SLWGPLSSWLSFCG Trigger: GCCACAGAAACTCAGCCAGCTGGAGAGAGGACCCCACAGAGACCACCAAAGGCCTCTGGGGACAAGGAGAGCAGCAGCTTCAACTGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | ACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGACCTGAGACCCAGTGGTaGACAGGGGCAGCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TFALGSTSPFRASSGGTGPETQW*TGAARM Trigger: CATCCTGGCTGCCCCTGTCAACCACTGGGTCTCAGG...TCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCCAAAACACTCACAGTaGAAGCTGCTGCTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHPSEPPVGEQETGGRATPKHSQ*KLLLSL Trigger: CAAGGAGAGCAGCAGCTTCAACTGTGAGTGTTTTGG...GGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 90 bp | GGGGGACATGGAGATTCCTTTCCCAAGTTTGAGTCCCTGAGTCCCTaGGGAGAGTCCCTCATTGGAATCCAGATGCCTGCTTGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGHGDSFPKFESLSP*GESLIGIQMPAWPW Trigger: CCAGGGCCAAGCAGGCATCTGGATTCCAATGAGGGACTCTCCTCAGGGACTCAGGGACTCAAACTTGGGAAAGGAATCTCCATGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 90 bp | ACACTCACAGTTGAAGCTGCTGCTCTCCTTGTCCCCAGAGGCCTTTaGTGGTCTCTGTGGGGTCCTCTCTCCAGCTGGCTGAGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLTVEAAALLVPRGL*WSLWGPLSSWLSFC Trigger: ACAGAAACTCAGCCAGCTGGAGAGAGGACCCCACAGAGACCACCAAAGGCCTCTGGGGACAAGGAGAGCAGCAGCTTCAACTGTGAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | TTCACCCTTCAGAGCCTCCAGTGGGGGAACAGGAGACAGGGGGAAGAGCCACCCTTCTTGCCTTTGGTCTaGTGCAGGATCCTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FTLQSLQWGNRRQGEEPPFLPLV*CRILLL Trigger: CAACAAGAGGATCCTGCACAAGACCAAAGGCAAGAA...GGGTGGCTCTTCCCCCTGTCTCCTGTTCCCCCACTGGAGGCTCTGAAGGGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCCATGCCCACATTTGCCCTTGGTTCAACTTCACCCTTCAGAGCCTCCAGTAAGCTGCTGCTCTCCTaGTCCCCAGAGGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPMPTFALGSTSPFRASSKLLLS*SPEAFG Trigger: ACCAAAGGCCTCTGGGGACAAGGAGAGCAGCAGCTT...ACTGGAGGCTCTGAAGGGTGAAGTTGAACCAAGGGCAAATGTGGGCATGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCTGGAACAGAGGTTCCTAGTGGCTGTGCAGTCAAGGGGAGGGCAGAGAAGCCAAAACACTCACAGTaGAAGCTGCTGCTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGTEVPSGCAVKGRAEKPKHSQ*KLLLSL Trigger: CAAGGAGAGCAGCAGCTTCAACTGTGAGTGTTTTGG...CTTCTCTGCCCTCCCCTTGACTGCACAGCCACTAGGAACCTCTGTTCCAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTAATCCAGATGCCTGCTaGGCCCTGGGCCAGGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: EILRLKPNKRWSAPAQPLNPDAC*ALGQDL Trigger: TAAATCCTGGCCCAGGGCCAAGCAGGCATCTGGATT...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS-3UTR CAA 90 bp | GAGATCCTAAGACTTAAGCCAAACAAACGCTGGTCTGCCCCAGCCCAGCCCCTTGAGGAGAGTCCCTCATaGGAATCCAGATGCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EILRLKPNKRWSAPAQPLEESPS*ESRCLL Trigger: AAGCAGGCATCTGGATTCCAATGAGGGACTCTCCTC...AAGGGGCTGGGCTGGGGCAGACCAGCGTTTGTTTGGCTTAAGTCTTAGGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 90 bp | TCATGTTCTCTGGATTGGGGGACATGGAGATTCCTTTCCCAAGTTTaGGTCCCTGAGTCCCTGAGGAGAGTCCCTCATTGGAATCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SCSLDWGTWRFLSQV*VPESLRRVPHWNPD Trigger: ATCTGGATTCCAATGAGGGACTCTCCTCAGGGACTCAGGGACTCAAACTTGGGAAAGGAATCTCCATGTCCCCCAATCCAGAGAACATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | GACACAGGGCAGGGGACCTCAGCAGCAGGCGAGGGCTaGGGGGTGCCCACACTTTCCACGGAGGGCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DTGQGTSAAGEG*GVPTLSTEGSW Trigger: CCAACTGCCCTCCGTGGAAAGTGTGGGCACCCCCCAGCCCTCGCCTGCTGCTGAGGTCCCCTGCCCTGTGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 72 bp | CTCAGCTTTGTAGGCCCAATCGGGGAAGGCCAGACCTaGGACCCAGTGGTTGACAGGGGCAGCCAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSFVGPIGEGQT*DPVVDRGSQDA Trigger: GGCATCCTGGCTGCCCCTGTCAACCACTGGGTCTCAGGTCTGGCCTTCCCCGATTGGGCCTACAAAGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CAA 72 bp | GCCCAATCGGGGAAGGCCAGACCTGAGACCCAGTGGTaGACAGGGGCAGCCAGGATGCCTTCTGAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AQSGKARPETQW*TGAARMPSEKQ Trigger: CTGCTTCTCAGAAGGCATCCTGGCTGCCCCTGTCAACCACTGGGTCTCAGGTCTGGCCTTCCCCGATTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 72 bp | CCCAATCGGGGAAGGCCAGACCTGAGACCCAGTGGTTaGCAGGGGCAGCCAGGATGCCTTCTGAGAAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PNRGRPDLRPSG*QGQPGCLLRSS Trigger: ACTGCTTCTCAGAAGGCATCCTGGCTGCCCCTGTCAACCACTGGGTCTCAGGTCTGGCCTTCCCCGATTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | GGCCTTTGGTGGTCTCTGTGGGGTCCTCTCTCCAGCTaGCTGAGTTTCTGTGGCCCGTGTGCACAGCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLWWSLWGPLSS*LSFCGPCAQHA Trigger: AGCATGCTGTGCACACGGGCCACAGAAACTCAGCCAGCTGGAGAGAGGACCCCACAGAGACCACCAAAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | GCTCTCCTTGTCCCCAGAGGCCTTTGGTGGTCTCTGTaGGGTCCTCTCTCCAGCTGGCTGAGTTTCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLVPRGLWWSL*GPLSSWLSFCG Trigger: GCCACAGAAACTCAGCCAGCTGGAGAGAGGACCCCACAGAGACCACCAAAGGCCTCTGGGGACAAGGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | GGAGCCCTGGAAAATGCCAGGTACCTGGCATACACATaGGGCCTGAGAGCCGAGGACCAGGCTTTGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: GALENARYLAYT*GLRAEDQALRT Trigger: GGTCCTCAAAGCCTGGTCCTCGGCTCTCAGGCCCCATGTGTATGCCAGGTACCTGGCATTTTCCAGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | TCTGTGGGGTCCTCTCTCCAGCTGGCTGAGTTTCTGTaGCCCGTGTGCACAGCATGCTATACAGGGGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVGSSLQLAEFL*PVCTACYTGAH Trigger: GTGAGCCCCTGTATAGCATGCTGTGCACACGGGCCACAGAAACTCAGCCAGCTGGAGAGAGGACCCCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CAA 90 bp | AGGTACCTGGCATACACATGGGGCCTGAGAGCCGAGGACCAGGCTTaGAGGACCCCGAAAGTGACTGCTCTGAGGGAAGAGGAGGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RYLAYTWGLRAEDQA*RTPKVTALREEEAR Trigger: TCTTGCCTCCTCTTCCCTCAGAGCAGTCACTTTCGGGGTCCTCAAAGCCTGGTCCTCGGCTCTCAGGCCCCATGTGTATGCCAGGTACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | GAGTCCCTCATTGGAATCCAGATGCCTGCTTGGCCCTaGGCCAGGATTTACCACCAATTCCTCGGGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ESLIGIQMPAWP*ARIYHQFLGPE Trigger: CTCAGGCCCGAGGAATTGGTGGTAAATCCTGGCCCAGGGCCAAGCAGGCATCTGGATTCCAATGAGGGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 72 bp | TTTGGTGGTCTCTGTGGGGTCCTCTCTCCAGCTGGCTaGGTTTCTGTGGCCCGTGTGCACAGCATGCTATAC | + |
|
Preference number: 6 (lower is better) Translates to: FGGLCGVLSPAG*VSVARVHSMLY Trigger: GTATAGCATGCTGTGCACACGGGCCACAGAAACTCAGCCAGCTGGAGAGAGGACCCCACAGAGACCACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | CCAGGATTTACCACCAATTCCTCGGGCCTGAGAAACTaGCACCAAAGCCCCTGGCCAGTGTTCTGTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGFTTNSSGLRN*HQSPWPVFCLS Trigger: GCTGAGACAGAACACTGGCCAGGGGCTTTGGTGCCAGTTTCTCAGGCCCGAGGAATTGGTGGTAAATCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CAA 72 bp | CTGAGGAGAGTCCCTCATTGGAATCCAGATGCCTGCTaGGCCCTGGGCCAGGATTTACCACCAATTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LRRVPHWNPDAC*ALGQDLPPIPR Trigger: CCGAGGAATTGGTGGTAAATCCTGGCCCAGGGCCAAGCAGGCATCTGGATTCCAATGAGGGACTCTCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 72 bp | CTGGATTGGGGGACATGGAGATTCCTTTCCCAAGTTTaGGTCCCTGAGTCCCTGAGGAGAGTCCCTCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: LDWGTWRFLSQV*VPESLRRVPHW Trigger: CCAATGAGGGACTCTCCTCAGGGACTCAGGGACTCAAACTTGGGAAAGGAATCTCCATGTCCCCCAATCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS TCA 72 bp | GGAGATTCCTTTCCCAAGTTTGAGTCCCTGAGTCCCTaGGGAGAGTCCCTCATTGGAATCCAGATGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GDSFPKFESLSP*GESLIGIQMPA Trigger: AGCAGGCATCTGGATTCCAATGAGGGACTCTCCTCAGGGACTCAGGGACTCAAACTTGGGAAAGGAATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||
| CDS CCA 72 bp | AGGAGGATCAGAAGGCCACATGACTCTCATGTTCTCTaGATTGGGGGACATGGAGATTCCTTTCCCAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RRIRRPHDSHVL*IGGHGDSFPKF Trigger: AAACTTGGGAAAGGAATCTCCATGTCCCCCAATCCAGAGAACATGAGAGTCATGTGGCCTTCTGATCCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238853.2 ENSMUST00000238894.2 |
||