Pregenerated sensors for ETV2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006311Ensembl transcript IDs: ENSMUST00000108147.3
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCGGGCCACCTCTTTGGGGTCGCACAGCTGGAACTCGCGGCTATTaGCCGTCCAGCGGATGCAGCTGCTGCGAGCCCCGTCGTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: AGPPLWGRTAGTRGY*PSSGCSCCEPRRGA Trigger: TGCTCCACGACGGGGCTCGCAGCAGCTGCATCCGCTGGACGGGCAATAGCCGCGAGTTCCAGCTGTGCGACCCCAAAGAGGTGGCCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS GCA 90 bp | CCCACAGAACAGTCCCAGCTGGTAGTGCTCCAGGCAGCTGGAGGGTaGGACCACGAGGGGACCCCTCCTGCCGAGGTGGCAGGATTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PTEQSQLVVLQAAGG*DHEGTPPAEVAGFW Trigger: CCAGAATCCTGCCACCTCGGCAGGAGGGGTCCCCTCGTGGTCGCACCCTCCAGCTGCCTGGAGCACTACCAGCTGGGACTGTTCTGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS TCA 90 bp | GCACACGTCCCCCGAAGCGGTATGTGTACTTGCGCCCACCACTCTTaGGCACGATGTCGCGGCGGTAATAATAACGTAGACCTCGACTCA | + |
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Preference number: 5 (lower is better) Translates to: AHVPRSGMCTCAHHS*ARCRGGNNNVDLDS Trigger: TGAGTCGAGGTCTACGTTATTATTACCGCCGCGACATCGTGCTCAAGAGTGGTGGGCGCAAGTACACATACCGCTTCGGGGGACGTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS CAA 90 bp | AGCCGGGCCACCTCTTTGGGGTCGCACAGCTGGAACTCGCGGCTATaGCCCGTCCAGCGGATGCAGCTGCTGCGAGCCCCGTCGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRATSLGSHSWNSRL*PVQRMQLLRAPSWS Trigger: GCTCCACGACGGGGCTCGCAGCAGCTGCATCCGCTGGACGGGCAATAGCCGCGAGTTCCAGCTGTGCGACCCCAAAGAGGTGGCCCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS GCA 72 bp | CAGTCCCAGCTGGTAGTGCTCCAGGCAGCTGGAGGGTaGGACCACGAGGGGACCCCTCCTGCCGAGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QSQLVVLQAAGG*DHEGTPPAEVA Trigger: TGCCACCTCGGCAGGAGGGGTCCCCTCGTGGTCGCACCCTCCAGCTGCCTGGAGCACTACCAGCTGGGACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS GCA 72 bp | ACAGCTGGAACTCGCGGCTATTGCCCGTCCAGCGGATaGAGCTGCTGCGAGCCCCGTCGTGGAGCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TAGTRGYCPSSG*SCCEPRRGAAP Trigger: TGGAGCTGCTCCACGACGGGGCTCGCAGCAGCTGCATCCGCTGGACGGGCAATAGCCGCGAGTTCCAGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS GCA 72 bp | CCTCTTTGGGGTCGCACAGCTGGAACTCGCGGCTATTaGCCGTCCAGCGGATGCAGCTGCTGCGAGCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: PLWGRTAGTRGY*PSSGCSCCEPR Trigger: ACGGGGCTCGCAGCAGCTGCATCCGCTGGACGGGCAATAGCCGCGAGTTCCAGCTGTGCGACCCCAAAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS CCA 72 bp | CACAGAACAGTCCCAGCTGGTAGTGCTCCAGGCAGCTaGAGGGTGCGACCACGAGGGGACCCCTCCTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: HRTVPAGSAPGS*RVRPRGDPSCR Trigger: TCGGCAGGAGGGGTCCCCTCGTGGTCGCACCCTCCAGCTGCCTGGAGCACTACCAGCTGGGACTGTTCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS CAA 72 bp | ACCTCTTTGGGGTCGCACAGCTGGAACTCGCGGCTATaGCCCGTCCAGCGGATGCAGCTGCTGCGAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TSLGSHSWNSRL*PVQRMQLLRAP Trigger: CGGGGCTCGCAGCAGCTGCATCCGCTGGACGGGCAATAGCCGCGAGTTCCAGCTGTGCGACCCCAAAGAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS TCA 72 bp | CCCAGGTCTGTCCAGTCTCGCGACCACGGAAGGGGGTaGGCAACGGGCTCCGCCTGGAAAGGTACGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: PRSVQSRDHGRG*ATGSAWKGTSS Trigger: CGAAGACGTACCTTTCCAGGCGGAGCCCGTTGCTCACCCCCTTCCGTGGTCGCGAGACTGGACAGACCTGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS CAA 72 bp | GGCGTCTGTGAAGCACAGCTCCACGGGTCCGAGGTGTaGCATCCCAGGTCTGTCCAGTCTCGCGACCACGGA | + |
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Preference number: 6 (lower is better) Translates to: GVCEAQLHGSEV*HPRSVQSRDHG Trigger: TCCGTGGTCGCGAGACTGGACAGACCTGGGATGCAACACCTCGGACCCGTGGAGCTGTGCTTCACAGACGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS CAA 72 bp | AGGACAGGCACACGTCCCCCGAAGCGGTATGTGTACTaGCGCCCACCACTCTTGAGCACGATGTCGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RTGTRPPKRYVY*RPPLLSTMSRR Trigger: CCGCCGCGACATCGTGCTCAAGAGTGGTGGGCGCAAGTACACATACCGCTTCGGGGGACGTGTGCCTGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS CCA 72 bp | AGACTGCTTGTTCGATTTGGAGGGCGTGGTGAATGCTaGACTCTGGTGCCCCTCGAAAGGGATGCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLLVRFGGRGEC*TLVPLERDAAV Trigger: GACTGCAGCATCCCTTTCGAGGGGCACCAGAGTCCAGCATTCACCACGCCCTCCAAATCGAACAAGCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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| CDS TCA 72 bp | CCCCGAAGCGGTATGTGTACTTGCGCCCACCACTCTTaGGCACGATGTCGCGGCGGTAATAATAACGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: PRSGMCTCAHHS*ARCRGGNNNVD Trigger: GTCTACGTTATTATTACCGCCGCGACATCGTGCTCAAGAGTGGTGGGCGCAAGTACACATACCGCTTCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108147.3 |
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