Pregenerated sensors for ETS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022895Ensembl transcript IDs: ENSMUST00000023612.17, ENSMUST00000232792.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTaGCCTCCCATGGGTCTTTGGAGCAAGTGGGTCAGGACGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: KGHCCLVALSRGVPS*PPMGLWSKWVRTGF Trigger: GAAGCCCGTCCTGACCCACTTGCTCCAAAGACCCATGGGAGGGCAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 90 bp | ACCATGGGGCATTGGCTTGTGGAAGAGGCGTGGATGAAAGGCCACTaGTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTGCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: TMGHWLVEEAWMKGH*CLVALSRGVPSCPP Trigger: GGGAGGGCAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCACGCCTCTTCCACAAGCCAATGCCCCATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR TCA 90 bp | TGCCGGTTTCCACCATGGGGCATTGGCTTGTGGAAGAGGCGTGGATaGAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCAT | + |
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Preference number: 1 (lower is better) Translates to: CRFPPWGIGLWKRRG*KATAAWWLSPEGYH Trigger: ATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCACGCCTCTTCCACAAGCCAATGCCCCATGGTGGAAACCGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 90 bp | GCTATGCCGGTTTCCACCATGGGGCATTGGCTTGTGGAAGAGGCGTaGATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: AMPVSTMGHWLVEEA*MKGHCCLVALSRGV Trigger: TACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCACGCCTCTTCCACAAGCCAATGCCCCATGGTGGAAACCGGCATAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 90 bp | ACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCTCCCAGGACTaGCACAGCAGGTCCCAGCTGGTCCTACGTCCCGTGTGGTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: TKHFSWGMQAKTSQD*HSRSQLVLRPVWSH Trigger: ATGAGACCACACGGGACGTAGGACCAGCTGGGACCTGCTGTGCCAGTCCTGGGAGGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 90 bp | AAATCTCTGAGCACACGGAGCAGAAAGAGGAGCATGCAGCCCAGATaGTTAAGAGACATAGCAGGTCAGCAAGACAGGAAGCACCACACT | + |
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Preference number: 1 (lower is better) Translates to: KSLSTRSRKRSMQPR*LRDIAGQQDRKHHT Trigger: AGTGTGGTGCTTCCTGTCTTGCTGACCTGCTATGTCTCTTAACCATCTGGGCTGCATGCTCCTCTTTCTGCTCCGTGTGCTCAGAGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR TCA 90 bp | AGGACAATTATAAGATACAATAGTATGTACAAACAAACTGACTTCTaGAATGGACAATCACACTCTCCACCTGCCGGGCCCTCTCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: RTIIRYNSMYKQTDF*NGQSHSPPAGPSQA Trigger: TGCTTGAGAGGGCCCGGCAGGTGGAGAGTGTGATTGTCCATTTCAGAAGTCAGTTTGTTTGTACATACTATTGTATCTTATAATTGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 90 bp | GTGTCAAGAAAAATACCGCTTTACAGCTTTTACAGTCCAGGAGAGTaGAGAGGCCATATGGACCCTCAAATAATAACATTAAGTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: VSRKIPLYSFYSPGE*RGHMDPQIITLSFL Trigger: TAAGAAACTTAATGTTATTATTTGAGGGTCCATATGGCCTCTCCACTCTCCTGGACTGTAAAAGCTGTAAAGCGGTATTTTTCTTGACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | GTGGATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTGCCTCCCATGGGTCTTTaGAGCAAGTGGGTCAGGACG | + |
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Preference number: 2 (lower is better) Translates to: VDERPLLLGGSLPRGTILPPMGL*SKWVRT Trigger: CGTCCTGACCCACTTGCTCCAAAGACCCATGGGAGG...CAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | ACAAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGGCCACTGCTGCTTaGTGGCTCTCTCCCGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: TNRSLCLTTKHFSWGMQAKATAA*WLSPEG Trigger: CCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTT...GGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCATCACACTCTCCACCTaGCGGGCCCTCTCAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RSLCLTTKHFSWGMQAKTITLST*RALSSR Trigger: TCTGCTTGAGAGGGCCCGGCAGGTGGAGAGTGTGAT...GGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | GCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCCTCGTACATCCTGCCCTCCCATaGGTCTTTGGAGCAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: AWGSHGGVSSSLDENLLVHPALP*VFGASG Trigger: CCCACTTGCTCCAAAGACCCATGGGAGGGCAGGATG...TACGAGGAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR GCA 90 bp | ACAAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCTGGATGAAAGGCCACTaGTGCTTGGTGGCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TNRSLCLTTKHFSWGMQAWMKGH*CLVALS Trigger: GGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCA...GGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR GCA 90 bp | AAAAATAAGAGGAGCAAATCTCTGAGCACACGGAGCAGAAAGAGGAGCATGCAGCGAGGGGTACCATCCTaGCCTCCCATGGGTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KNKRSKSLSTRSRKRSMQRGVPS*PPMGLW Trigger: CCAAAGACCCATGGGAGGGCAGGATGGTACCCCTCG...CTGCATGCTCCTCTTTCTGCTCCGTGTGCTCAGAGATTTGCTCCTCTTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCATCAATGTCACTTGCTaGTCTGAGGTCACCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: RSLCLTTKHFSWGMQAKTINVTC*SEVTML Trigger: CAGCATGGTGACCTCAGATCAGCAAGTGACATTGAT...GGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR GCA 90 bp | ACAAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCGCAGAGGTGGCTTTTTaGATTTGCTACTCCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TNRSLCLTTKHFSWGMQAAEVAF*ICYSWR Trigger: CCTCCAGGAGTAGCAAATGCAAAAAGCCACCTCTGC...GGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | AGGGAAGTGGAAAACATGTGCCATGTGTCAAGAAAAATACCGCTTTACAGCTTTGCCACTGCTGCTTGGTaGCTCTCTCCCGAGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: REVENMCHVSRKIPLYSFATAAW*LSPEGY Trigger: GTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGC...AAAGCTGTAAAGCGGTATTTTTCTTGACACATGGCACATGTTTTCCACTTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTGTTGTAGTCACACAGAATATCTTGGGGCGAAGGAAGGGAAGGACTGGTACAGTCCAGGAGAGTaGAGAGGCCATATGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: SSCCSHTEYLGAKEGKDWYSPGE*RGHMDP Trigger: AGGGTCCATATGGCCTCTCCACTCTCCTGGACTGTA...CCAGTCCTTCCCTTCCTTCGCCCCAAGATATTCTGTGTGACTACAACAAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACAAACAAACTGACTTCTaGAATGGACAATCACACTCT | + |
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Preference number: 2 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDKQTDF*NGQSHS Trigger: AGAGTGTGATTGTCCATTTCAGAAGTCAGTTTGTTT...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCTCCCAAACCTATTAGGTATCTaGATTCTTGATTCAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PVLNHKAFLLGHAGQDLPNLLGI*ILDSDK Trigger: CTTGTCTGAATCAAGAATGCAGATACCTAATAGGTT...TGGGAGGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CAA 90 bp | AACCAGGTAAAACCGTCATGTTGGCTGACAAGACTCAGGTTAAACTaGGCAATGTCATGTGGCTCCACTGTACATAAACTGACTGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: NQVKPSCWLTRLRLN*AMSCGSTVHKLTED Trigger: ATCCTCAGTCAGTTTATGTACAGTGGAGCCACATGACATTGCCAAGTTTAACCTGAGTCTTGTCAGCCAACATGACGGTTTTACCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR GCA 90 bp | AAAAATAAGAGGAGCAAATCTCTGAGCACACGGAGCAGAAAGAGGAGCATGCAGAATTGGCTTAAGGCATaGAGGGAAGTGGAAAACATG | + |
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Preference number: 2 (lower is better) Translates to: KNKRSKSLSTRSRKRSMQNWLKA*REVENM Trigger: CATGTTTTCCACTTCCCTGCATGCCTTAAGCCAATT...CTGCATGCTCCTCTTTCTGCTCCGTGTGCTCAGAGATTTGCTCCTCTTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | ATGAAAGCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCCATTTGTGTATAAATTaGCTTAAGGCATGCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: MKAWGSHGGVSSSLDENLHLCIN*LKACRE Trigger: TTCCCTGCATGCCTTAAGCCAATTTATACACAAATG...GAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGCTTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | AAACCTTCATACTTAAGACCCAGCCAAAGACTTCTGAGGACTTCCATGACTGTTAGCATGCAGCCCAGATaGTTAAGAGACATAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KPSYLRPSQRLLRTSMTVSMQPR*LRDIAG Trigger: ACCTGCTATGTCTCTTAACCATCTGGGCTGCATGCT...AACAGTCATGGAAGTCCTCAGAAGTCTTTGGCTGGGTCTTAAGTATGAAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTGTTGTAGTCACACAGAATATCTTGGGGCGAAGGAAGGGAAGGACTGGCAATATACAAAGTCCTaGTCAGATAATGAGCAACAA | + |
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Preference number: 2 (lower is better) Translates to: SSCCSHTEYLGAKEGKDWQYTKS*SDNEQQ Trigger: TTGTTGCTCATTATCTGACCAGGACTTTGTATATTG...CCAGTCCTTCCCTTCCTTCGCCCCAAGATATTCTGTGTGACTACAACAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 72 bp | TTCTCTTGGGGCATGCAGGCCAAGACCTCCCAGGACTaGCACAGCAGGTCCCAGCTGGTCCTACGTCCCGTG | + |
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Preference number: 3 (lower is better) Translates to: FSWGMQAKTSQD*HSRSQLVLRPV Trigger: CACGGGACGTAGGACCAGCTGGGACCTGCTGTGCCAGTCCTGGGAGGTCTTGGCCTGCATGCCCCAAGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | TGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTaGCCTCCCATGGGTCTTTGGAGCAAGTGGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: CCLVALSRGVPS*PPMGLWSKWVR Trigger: CCTGACCCACTTGCTCCAAAGACCCATGGGAGGGCAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CAA 90 bp | GTGGATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTGCCCTCCCATGGGTCTTaGGAGCAAGTGGGTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: VDERPLLLGGSLPRGTILPSHGS*EQVGQD Trigger: GTCCTGACCCACTTGCTCCAAAGACCCATGGGAGGG...CAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR TCA 72 bp | CCACCATGGGGCATTGGCTTGTGGAAGAGGCGTGGATaGAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: PPWGIGLWKRRG*KATAAWWLSPE Trigger: CTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCACGCCTCTTCCACAAGCCAATGCCCCATGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | CATTGGCTTGTGGAAGAGGCGTGGATGAAAGGCCACTaGTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCC | + |
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Preference number: 3 (lower is better) Translates to: HWLVEEAWMKGH*CLVALSRGVPS Trigger: GGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCACGCCTCTTCCACAAGCCAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | CCTGGAGCATCTCAAATAGCCACAATGCACAGGGCCTaGTCGGTGCCACGGTGGCTTCCCAGAGACTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: PGASQIATMHRA*SVPRWLPRDSS Trigger: GGAAGAGTCTCTGGGAAGCCACCGTGGCACCGAGCAGGCCCTGTGCATTGTGGCTATTTGAGATGCTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 72 bp | GTTTCCACCATGGGGCATTGGCTTGTGGAAGAGGCGTaGATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: VSTMGHWLVEEA*MKGHCCLVALS Trigger: GGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCACGCCTCTTCCACAAGCCAATGCCCCATGGTGGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 72 bp | TCTCAGTGTCTGTGTATCCACCACATGCTGGCTCCCTaGAGCATCTCAAATAGCCACAATGCACAGGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: SQCLCIHHMLAP*SISNSHNAQGL Trigger: CAGGCCCTGTGCATTGTGGCTATTTGAGATGCTCCAGGGAGCCAGCATGTGGTGGATACACAGACACTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CAA 90 bp | ATGAAAGCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCTTCCACCATGGGGCATaGGCTTGTGGAAGAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: MKAWGSHGGVSSSLDENLFHHGA*ACGRGV Trigger: CACGCCTCTTCCACAAGCCAATGCCCCATGGTGGAA...GAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGCTTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | TCGTACAGAACTGGTCCAAGACACCATTTCCCAGCATaGTTGCTCTGTCTGTGCTTCTGGGTATCCATGGCC | + |
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Preference number: 3 (lower is better) Translates to: SYRTGPRHHFPA*LLCLCFWVSMA Trigger: GGCCATGGATACCCAGAAGCACAGACAGAGCAAGCATGCTGGGAAATGGTGTCTTGGACCAGTTCTGTACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 72 bp | AGCACACGGAGCAGAAAGAGGAGCATGCAGCCCAGATaGTTAAGAGACATAGCAGGTCAGCAAGACAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: STRSRKRSMQPR*LRDIAGQQDRK Trigger: CTTCCTGTCTTGCTGACCTGCTATGTCTCTTAACCATCTGGGCTGCATGCTCCTCTTTCTGCTCCGTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CAA 90 bp | AGGGAAGTGGAAAACATGTGCCATGTGTCAAGAAAAATACCGCTTTACAGCTTTAAAGGCCACTGCTGCTaGGTGGCTCTCTCCCGAGGG | + |
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Preference number: 3 (lower is better) Translates to: REVENMCHVSRKIPLYSFKGHCC*VALSRG Trigger: CCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTT...AAAGCTGTAAAGCGGTATTTTTCTTGACACATGGCACATGTTTTCCACTTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CAA 90 bp | ACAAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCGGTGGCTTTTTGCATTaGCTACTCCTGGAGGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: TNRSLCLTTKHFSWGMQAGGFLH*LLLEAK Trigger: TTTTGCCTCCAGGAGTAGCAAATGCAAAAAGCCACC...GGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR TCA 72 bp | ACTTGGCAATGTCATGTGGCTCCACTGTACATAAACTaGCTGAGGATTAGGCCTCTGACAGGAGGATGCTCC | + |
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Preference number: 3 (lower is better) Translates to: TWQCHVAPLYIN*LRIRPLTGGCS Trigger: GGAGCATCCTCCTGTCAGAGGCCTAATCCTCAGTCAGTTTATGTACAGTGGAGCCACATGACATTGCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | ACAGAACTGGTCCAAGACACCATTTCCCAGCATGCTTaGTCTGTCTGTGCTTCTGGGTATCCATGGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: TELVQDTISQHA*SVCASGYPWPK Trigger: TTTTGGCCATGGATACCCAGAAGCACAGACAGAGCAAGCATGCTGGGAAATGGTGTCTTGGACCAGTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | TTACACACAGATGTCCCAGCGACAAACAGGTCCCTGTaGTTAACCACAAAGCATTTCTCTTGGGGCATGCAG | + |
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Preference number: 3 (lower is better) Translates to: LHTDVPATNRSL*LTTKHFSWGMQ Trigger: CTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGTCGCTGGGACATCTGTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 72 bp | AGCTCTTCACTAGATGAGAACCTCCTCGTACAGAACTaGTCCAAGACACCATTTCCCAGCATGCTTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SSSLDENLLVQN*SKTPFPSMLAL Trigger: CAGAGCAAGCATGCTGGGAAATGGTGTCTTGGACCAGTTCTGTACGAGGAGGTTCTCATCTAGTGAAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR-3UTR CAA 90 bp | AAAAATAAGAGGAGCAAATCTCTGAGCACACGGAGCAGAAAGAGGAGCATGCAGGTCACACAGAATATCTaGGGGCGAAGGAAGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: KNKRSKSLSTRSRKRSMQVTQNI*GRRKGR Trigger: CCTTCCCTTCCTTCGCCCCAAGATATTCTGTGTGAC...CTGCATGCTCCTCTTTCTGCTCCGTGTGCTCAGAGATTTGCTCCTCTTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 72 bp | ACAATGTTTCTCAGTGTCTGTGTATCCACCACATGCTaGCTCCCTGGAGCATCTCAAATAGCCACAATGCAC | + |
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Preference number: 3 (lower is better) Translates to: TMFLSVCVSTTC*LPGASQIATMH Trigger: GTGCATTGTGGCTATTTGAGATGCTCCAGGGAGCCAGCATGTGGTGGATACACAGACACTGAGAAACATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | AAAACAATGTTTCTCAGTGTCTGTGTATCCACCACATaGTGGCTCCCTGGAGCATCTCAAATAGCCACAATG | + |
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Preference number: 3 (lower is better) Translates to: KTMFLSVCVSTT*WLPGASQIATM Trigger: CATTGTGGCTATTTGAGATGCTCCAGGGAGCCAGCATGTGGTGGATACACAGACACTGAGAAACATTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR TCA 72 bp | ATAAGATACAATAGTATGTACAAACAAACTGACTTCTaGAATGGACAATCACACTCTCCACCTGCCGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: IRYNSMYKQTDF*NGQSHSPPAGP Trigger: GGGCCCGGCAGGTGGAGAGTGTGATTGTCCATTTCAGAAGTCAGTTTGTTTGTACATACTATTGTATCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR GCA 72 bp | AATTGGCTTAAGGCATGCAGGGAAGTGGAAAACATGTaGCATGTGTCAAGAAAAATACCGCTTTACAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: NWLKACREVENM*HVSRKIPLYSF Trigger: AAAGCTGTAAAGCGGTATTTTTCTTGACACATGGCACATGTTTTCCACTTCCCTGCATGCCTTAAGCCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CCA 72 bp | ATGACTGTTAGATTCAACCAGGTAAAACCGTCATGTTaGCTGACAAGACTCAGGTTAAACTTGGCAATGTCA | + |
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Preference number: 3 (lower is better) Translates to: MTVRFNQVKPSC*LTRLRLNLAMS Trigger: TGACATTGCCAAGTTTAACCTGAGTCTTGTCAGCCAACATGACGGTTTTACCTGGTTGAATCTAACAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | ATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTGCCCTTCCAGTAGGGACGACTaGCTGTTCCAGGACCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKGHCCLVALSRGVPSCPSSRDD*LFQDLS Trigger: GCTGAGGTCCTGGAACAGCCAGTCGTCCCTACTGGA...AGGGCAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR TCA 90 bp | GTGGATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTGTCACATTCACCAGGCTaGACTCGTTGGTGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDERPLLLGGSLPRGTILSHSPG*TRWWPR Trigger: TCTGGGCCACCAACGAGTTCAGCCTGGTGAATGTGA...CAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR GCA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCACTGGCACACCTGCTaGTCGCTCCACAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDHWHTC*SLHSQG Trigger: CCCCTGGCTGTGGAGCGAGCAGCAGGTGTGCCAGTG...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR GCA 90 bp | ACAAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCCTCAGAGCCCAGAGCTaGAGGCGTGGCCGATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TNRSLCLTTKHFSWGMQALRAQS*RRGRWR Trigger: CCGCCATCGGCCACGCCTGCAGCTCTGGGCTCTGAG...GGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTGCCCTGACTTGGGCAACATCTaGAGCTCAGAGCCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKGHCCLVALSRGVPSCPDLGNI*SSEPRA Trigger: AGCTCTGGGCTCTGAGCTCCAGATGTTGCCCAAGTC...AGGGCAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR TCA 90 bp | ACCACATGCTGGCTCCCTGGAGCATCTCAAATAGCCACAATGCACAGGGCCTGCTTGGTCCGCTTCCAGTaGAGCCAGCCAGTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTCWLPGASQIATMHRACLVRFQ*SQPVLL Trigger: CAGCAGTACTGGCTGGCTTCACTGGAAGCGGACCAA...GCAGGCCCTGTGCATTGTGGCTATTTGAGATGCTCCAGGGAGCCAGCATGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR GCA 90 bp | GCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCCTCGTAAGCCACTGGCACACCTaGTGCTCGCTCCACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWGSHGGVSSSLDENLLVSHWHT*CSLHSQ Trigger: CTGGCTGTGGAGCGAGCAGCAGGTGTGCCAGTGGCT...TACGAGGAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | ACCACATGCTGGCTCCCTGGAGCATCTCAAATAGCCACAATGCACAGGGCCTGCGAAGGTGTCAAAGGCTaGCTGGCGCTTGAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTCWLPGASQIATMHRACEGVKG*LALECP Trigger: GGGACACTCAAGCGCCAGCCAGCCTTTGACACCTTC...GCAGGCCCTGTGCATTGTGGCTATTTGAGATGCTCCAGGGAGCCAGCATGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR CCA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACGCTGGACGCCCAGGATaGCATGCAGTTCCTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDAGRPG*HAVPPE Trigger: CTCCGGAGGAACTGCATGCCATCCTGGGCGTCCAGC...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR TCA 90 bp | ACAAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCCCTTGCTGCAGGGAGTaGGCAAAGGCAGCTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNRSLCLTTKHFSWGMQAPCCRE*AKAARS Trigger: GCTGCGAGCTGCCTTTGCTCACTCCCTGCAGCAAGG...GGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR CCA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCAGCTGGCCGAGTCATaGGAGACAGAATCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDQLAES*ETESRP Trigger: GGGCCTGGATTCTGTCTCCCATGACTCGGCCAGCTG...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCTCCCAGTCCCCACCGTTCTCTaGAGAGTCGTGGTCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVLNHKAFLLGHAGQDLPVPTVL*RVVVLG Trigger: CCCAAGGACCACGACTCTCCAGAGAACGGTGGGGAC...TGGGAGGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGGCCACTGCTGCTTGGTGGCTCTCTCCCGAGGGGTACCATCCTGCCCTTTCATGCCAAACTGGTaGAGGTTCACATTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MKGHCCLVALSRGVPSCPFMPNW*RFTFTR Trigger: CCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAA...AGGGCAGGATGGTACCCCTCGGGAGAGAGCCACCAAGCAGCAGTGGCCTTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR CCA 90 bp | ACCACATGCTGGCTCCCTGGAGCATCTCAAATAGCCACAATGCACAGGGCCTGCGCGACAGGGGCCACTTaGTCCATGTTCTTGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTCWLPGASQIATMHRACATGAT*SMFLIP Trigger: TGGAATCAAGAACATGGACCAAGTGGCCCCTGTCGC...GCAGGCCCTGTGCATTGTGGCTATTTGAGATGCTCCAGGGAGCCAGCATGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACTCTTCTGTATCAGGCTaGACGCCCAGGATGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDSSVSG*TPRMAC Trigger: GCATGCCATCCTGGGCGTCCAGCCTGATACAGAAGA...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| 3UTR CAA 72 bp | AAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTaGGGGCATGCAGGCCAAGACCTCCCAGGACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQVPVLNHKAFL*GHAGQDLPGLA Trigger: TGCCAGTCCTGGGAGGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR TCA 90 bp | ATGAAAGCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCGCAGTTCCTCCGGAGTaGAGCCCAGCAAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKAWGSHGGVSSSLDENLAVPPE*SPASSA Trigger: TGCAGAACTTGCTGGGCTTCACTCCGGAGGAACTGC...GAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGCTTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCTGAGGCACAGAGACTaGCTACAGTCCTCCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDLRHRD*LQSSSK Trigger: CTTTGAGGAGGACTGTAGCCAGTCTCTGTGCCTCAG...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR GCA 90 bp | TCTTCTTGTTGTAGTCACACAGAATATCTTGGGGCGAAGGAAGGGAAGGACTGGACGCCCAGGATGGCATaGAGTTCCTCCGGAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCCSHTEYLGAKEGKDWTPRMA*SSSGVK Trigger: CTTCACTCCGGAGGAACTGCATGCCATCCTGGGCGT...CCAGTCCTTCCCTTCCTTCGCCCCAAGATATTCTGTGTGACTACAACAAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | ATGAAAGCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCCAGAATCCAGGCCCGTaGGCACTTCTTGGAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKAWGSHGGVSSSLDENLQNPGP*ALLGVS Trigger: AGACACTCCAAGAAGTGCCCACGGGCCTGGATTCTG...GAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGCTTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR TCA 90 bp | ATGAAAGCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCACATGGTCAGCTTACTaGGGCACAGAGACTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: MKAWGSHGGVSSSLDENLTWSAY*GTETGY Trigger: GTAGCCAGTCTCTGTGCCTCAGTAAGCTGACCATGT...GAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGCTTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR GCA 90 bp | GTTAGCTCTTCACTAGATGAGAACCTCCTCGTACAGAACTGGTCCAAGACACCACCAGGAAGCGCTCCTTaGCGAGGTTACACAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSSLDENLLVQNWSKTPPGSAP*RGYTAS Trigger: AGATGCTGTGTAACCTCGGCAAGGAGCGCTTCCTGG...TGGTGTCTTGGACCAGTTCTGTACGAGGAGGTTCTCATCTAGTGAAGAGCTAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR GCA 90 bp | ACAAACAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAGCTCCAGAAGAAACTaGCACAACTGGATTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TNRSLCLTTKHFSWGMQASSRRN*HNWIGP Trigger: CGGACCAATCCAGTTGTGGCAGTTTCTTCTGGAGCT...GGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | CCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCTCCCATTCTCTGGAGAGTCGTaGTCCTTGGGTTTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVLNHKAFLLGHAGQDLPFSGES*SLGFPE Trigger: TTCTGGAAAACCCAAGGACCACGACTCTCCAGAGAA...TGGGAGGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR TCA 90 bp | ATGAAAGCGTGGGGGTCTCATGGTGGAGTTAGCTCTTCACTAGATGAGAACCTCACTTCTTGGAGTGTCTaGTCTTCACTGAGAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MKAWGSHGGVSSSLDENLTSWSV*SSLREG Trigger: CCCTTCTCTCAGTGAAGATCAGACACTCCAAGAAGT...GAGGTTCTCATCTAGTGAAGAGCTAACTCCACCATGAGACCCCCACGCTTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | ATGTTTCTCAGTGTCTGTGTATCCACCACATGCTGGCTCCCTGGAGCATCTCAAGTCTTTGGGGTAGTTTaGTGCCTGCATTCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: MFLSVCVSTTCWLPGASQVFGVV*CLHSIW Trigger: CCATATGGAATGCAGGCACCAAACTACCCCAAAGAC...TTGAGATGCTCCAGGGAGCCAGCATGTGGTGGATACACAGACACTGAGAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR GCA 90 bp | GTTAGCTCTTCACTAGATGAGAACCTCCTCGTACAGAACTGGTCCAAGACACCAGAAGCCAGCCAGTACTaGTGCAGGAATAACTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSSLDENLLVQNWSKTPEASQY*CRNNWF Trigger: AAACCAGTTATTCCTGCAGCAGTACTGGCTGGCTTC...TGGTGTCTTGGACCAGTTCTGTACGAGGAGGTTCTCATCTAGTGAAGAGCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | AAAAATAAGAGGAGCAAATCTCTGAGCACACGGAGCAGAAAGAGGAGCATGCAGAGGTTACACAGCATCTaGCCGTTCATGCCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNKRSKSLSTRSRKRSMQRLHSI*PFMPNW Trigger: CCAGTTTGGCATGAACGGCCAGATGCTGTGTAACCT...CTGCATGCTCCTCTTTCTGCTCCGTGTGCTCAGAGATTTGCTCCTCTTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | GTTAGCTCTTCACTAGATGAGAACCTCCTCGTACAGAACTGGTCCAAGACACCATGCCTGCATTCCATATaGAGCCTGTTCCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSSLDENLLVQNWSKTPCLHSI*SLFHAE Trigger: TTCAGCATGGAACAGGCTCCATATGGAATGCAGGCA...TGGTGTCTTGGACCAGTTCTGTACGAGGAGGTTCTCATCTAGTGAAGAGCTAAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR TCA 90 bp | AAAAATAAGAGGAGCAAATCTCTGAGCACACGGAGCAGAAAGAGGAGCATGCAGCCTTTTGGAAGCCACTaGAGGTGGCTTTTAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNKRSKSLSTRSRKRSMQPFGSH*RWLLRL Trigger: AAGCCTTAAAAGCCACCTTCAGTGGCTTCCAAAAGG...CTGCATGCTCCTCTTTCTGCTCCGTGTGCTCAGAGATTTGCTCCTCTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR TCA 90 bp | CCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACCTCCCATTTCTTGGTTCTCTTTaGTCATCTGCTCTAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLNHKAFLLGHAGQDLPFLGSL*SSALDV Trigger: AACATCTAGAGCAGATGATCAAAGAGAACCAAGAAA...TGGGAGGTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | ATAGTATGTACAAACAAACTGACTTCTGAAATGGACAATCACACTCTCCACCTGGTGTCAAAGGCTGGCTaGCGCTTGAGTGTCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: IVCTNKLTSEMDNHTLHLVSKAG*RLSVPR Trigger: TCGTGGGACACTCAAGCGCCAGCCAGCCTTTGACAC...CAGGTGGAGAGTGTGATTGTCCATTTCAGAAGTCAGTTTGTTTGTACATACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR GCA 90 bp | AAACCTTCATACTTAAGACCCAGCCAAAGACTTCTGAGGACTTCCATGACTGTTAAGCCCAGCAAGTTCTaGAGGTCACATACGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: KPSYLRPSQRLLRTSMTVKPSKF*RSHTKR Trigger: CCGTTTCGTATGTGACCTGCAGAACTTGCTGGGCTT...AACAGTCATGGAAGTCCTCAGAAGTCTTTGGCTGGGTCTTAAGTATGAAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | AAACCTTCATACTTAAGACCCAGCCAAAGACTTCTGAGGACTTCCATGACTGTTCCAGGAGATTGTCTTTaGGGTAGTTTGGTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPSYLRPSQRLLRTSMTVPGDCL*GSLVPA Trigger: TGCAGGCACCAAACTACCCCAAAGACAATCTCCTGG...AACAGTCATGGAAGTCCTCAGAAGTCTTTGGCTGGGTCTTAAGTATGAAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| 3UTR CAA 72 bp | AAACCGTCATGTTGGCTGACAAGACTCAGGTTAAACTaGGCAATGTCATGTGGCTCCACTGTACATAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KPSCWLTRLRLN*AMSCGSTVHKL Trigger: CAGTTTATGTACAGTGGAGCCACATGACATTGCCAAGTTTAACCTGAGTCTTGTCAGCCAACATGACGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CCA 90 bp | AGGGAAGTGGAAAACATGTGCCATGTGTCAAGAAAAATACCGCTTTACAGCTTTGAGAGTCGTGGTCCTTaGGTTTTCCAGAATTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: REVENMCHVSRKIPLYSFESRGP*VFQNCC Trigger: ACAACAATTCTGGAAAACCCAAGGACCACGACTCTC...AAAGCTGTAAAGCGGTATTTTTCTTGACACATGGCACATGTTTTCCACTTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS GCA 90 bp | GGAGCTCAGAGCCCAGAGCTGCAGGCGTGGCCGATGGCGGGCACATaGTGTCCAGGAGATTGTCTTTGGGGTAGTTTGGTGCCTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GAQSPELQAWPMAGT*CPGDCLWGSLVPAF Trigger: GAATGCAGGCACCAAACTACCCCAAAGACAATCTCCTGGACAGCATGTGCCCGCCATCGGCCACGCCTGCAGCTCTGGGCTCTGAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS CCA 90 bp | GGCGCCAGCTCCAGGAAGCGCTCCTTGCCGAGGTTACACAGCATCTaGCCGTTCATGCCAAACTGGTGCAGGTTCACATTCACCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GASSRKRSLPRLHSI*PFMPNWCRFTFTRL Trigger: CAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGATGCTGTGTAACCTCGGCAAGGAGCGCTTCCTGGAGCTGGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS TCA 90 bp | TCTGGCCGTTCATGCCAAACTGGTGCAGGTTCACATTCACCAGGCTaGACTCGTTGGTGGCCCAGAGAAGCCACTGGCACACCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGRSCQTGAGSHSPG*TRWWPREATGTPAA Trigger: AGCAGCAGGTGTGCCAGTGGCTTCTCTGGGCCACCAACGAGTTCAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS CCA 90 bp | CGCTCCTTGCCGAGGTTACACAGCATCTGGCCGTTCATGCCAAACTaGTGCAGGTTCACATTCACCAGGCTGAACTCGTTGGTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSLPRLHSIWPFMPN*CRFTFTRLNSLVAQ Trigger: CTGGGCCACCAACGAGTTCAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGATGCTGTGTAACCTCGGCAAGGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
||
| CDS GCA 90 bp | TCCTTGCCGAGGTTACACAGCATCTGGCCGTTCATGCCAAACTGGTaGAGGTTCACATTCACCAGGCTGAACTCGTTGGTGGCCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLPRLHSIWPFMPNW*RFTFTRLNSLVAQR Trigger: TCTCTGGGCCACCAACGAGTTCAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGATGCTGTGTAACCTCGGCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACGGCGACAGGGGCCACTaGGTCCATGTTCTTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDGDRGH*VHVLDS Trigger: GGAATCAAGAACATGGACCAAGTGGCCCCTGTCGCC...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS TCA 90 bp | TCATGGGAGACAGAATCCAGGCCCGTGGGCACTTCTTGGAGTGTCTaGTCTTCACTGAGAGAAGGGAGCACAGCAAACAGAGAGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SWETESRPVGTSWSV*SSLREGSTANREPS Trigger: CGATGGCTCTCTGTTTGCTGTGCTCCCTTCTCTCAGTGAAGATCAGACACTCCAAGAAGTGCCCACGGGCCTGGATTCTGTCTCCCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
||
| CDS TCA 90 bp | CAGAATCCAGGCCCGTGGGCACTTCTTGGAGTGTCTGATCTTCACTaGGAGAAGGGAGCACAGCAAACAGAGAGCCATCGAAGGTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QNPGPWALLGVSDLH*EKGAQQTESHRRCQ Trigger: TTGACACCTTCGATGGCTCTCTGTTTGCTGTGCTCCCTTCTCTCAGTGAAGATCAGACACTCCAAGAAGTGCCCACGGGCCTGGATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCTCAGTGTCTGTGTATCCACCACATGCTGGCTCCCTGGAGCATCTCAATCCAGGAAGCGCTCCTaGCCGAGGTTACACAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: MFLSVCVSTTCWLPGASQSRKRS*PRLHSI Trigger: GATGCTGTGTAACCTCGGCAAGGAGCGCTTCCTGGA...TTGAGATGCTCCAGGGAGCCAGCATGTGGTGGATACACAGACACTGAGAAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
||
| CDS-3UTR CAA 90 bp | CAGGTCCCTGTGCTTAACCACAAAGCATTTCTCTTGGGGCATGCAGGCCAAGACTGTCTTTGGGGTAGTTaGGTGCCTGCATTCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: QVPVLNHKAFLLGHAGQDCLWGS*VPAFHM Trigger: CATATGGAATGCAGGCACCAAACTACCCCAAAGACA...GTCTTGGCCTGCATGCCCCAAGAGAAATGCTTTGTGGTTAAGCACAGGGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CAA 90 bp | GTTAGCTCTTCACTAGATGAGAACCTCCTCGTACAGAACTGGTCCAAGACACCATTTTCTTGGTTCTCTTaGATCATCTGCTCTAGATGT | + |
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Preference number: 5 (lower is better) Translates to: VSSSLDENLLVQNWSKTPFSWFS*IICSRC Trigger: ACATCTAGAGCAGATGATCAAAGAGAACCAAGAAAA...TGGTGTCTTGGACCAGTTCTGTACGAGGAGGTTCTCATCTAGTGAAGAGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS-3UTR CAA 90 bp | ATAGTATGTACAAACAAACTGACTTCTGAAATGGACAATCACACTCTCCACCTGGTCTTCTGTCTTTTCTaGGTTCTCTTTGATCATCTG | + |
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Preference number: 5 (lower is better) Translates to: IVCTNKLTSEMDNHTLHLVFCLF*VLFDHL Trigger: CAGATGATCAAAGAGAACCAAGAAAAGACAGAAGAC...CAGGTGGAGAGTGTGATTGTCCATTTCAGAAGTCAGTTTGTTTGTACATACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS CCA 72 bp | GGAGTGAGCAAAGGCAGCTCGCAGCTGGCCGAGTCATaGGAGACAGAATCCAGGCCCGTGGGCACTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GVSKGSSQLAES*ETESRPVGTSW Trigger: CCAAGAAGTGCCCACGGGCCTGGATTCTGTCTCCCATGACTCGGCCAGCTGCGAGCTGCCTTTGCTCACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS GCA 72 bp | AGCCCAGAGCTGCAGGCGTGGCCGATGGCGGGCACATaGTGTCCAGGAGATTGTCTTTGGGGTAGTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SPELQAWPMAGT*CPGDCLWGSLV Trigger: CACCAAACTACCCCAAAGACAATCTCCTGGACAGCATGTGCCCGCCATCGGCCACGCCTGCAGCTCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS CCA 72 bp | AAGGAAGGTACCCGCTGTACATCCAGTAGGGACGACTaGCTGTTCCAGGACCTCAGCAGCGAGTCGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: KEGTRCTSSRDD*LFQDLSSESEL Trigger: GAGCTCCGACTCGCTGCTGAGGTCCTGGAACAGCCAGTCGTCCCTACTGGATGTACAGCGGGTACCTTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023612.17 |
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| CDS TCA 72 bp | GGCCCGTGGGCACTTCTTGGAGTGTCTGATCTTCACTaGGAGAAGGGAGCACAGCAAACAGAGAGCCATCGA | + |
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Preference number: 6 (lower is better) Translates to: GPWALLGVSDLH*EKGAQQTESHR Trigger: TCGATGGCTCTCTGTTTGCTGTGCTCCCTTCTCTCAGTGAAGATCAGACACTCCAAGAAGTGCCCACGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS TCA 72 bp | TCATGCCAAACTGGTGCAGGTTCACATTCACCAGGCTaGACTCGTTGGTGGCCCAGAGAAGCCACTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: SCQTGAGSHSPG*TRWWPREATGT Trigger: TGTGCCAGTGGCTTCTCTGGGCCACCAACGAGTTCAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS CCA 72 bp | TCCAGGAAGCGCTCCTTGCCGAGGTTACACAGCATCTaGCCGTTCATGCCAAACTGGTGCAGGTTCACATTC | + |
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Preference number: 6 (lower is better) Translates to: SRKRSLPRLHSI*PFMPNWCRFTF Trigger: GAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGATGCTGTGTAACCTCGGCAAGGAGCGCTTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS CCA 72 bp | CCGAGGTTACACAGCATCTGGCCGTTCATGCCAAACTaGTGCAGGTTCACATTCACCAGGCTGAACTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: PRLHSIWPFMPN*CRFTFTRLNSL Trigger: CAACGAGTTCAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGATGCTGTGTAACCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS TCA 72 bp | ACAGAATCCAGGCCCGTGGGCACTTCTTGGAGTGTCTaGTCTTCACTGAGAGAAGGGAGCACAGCAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: TESRPVGTSWSV*SSLREGSTANR Trigger: TCTGTTTGCTGTGCTCCCTTCTCTCAGTGAAGATCAGACACTCCAAGAAGTGCCCACGGGCCTGGATTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS TCA 72 bp | GGATGCCAAGACGTCGTTGCTCCTTTTGGAAGCCACTaGAGGTGGCTTTTAAGGCTTGGCTCATCACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: GCQDVVAPFGSH*RWLLRLGSSLP Trigger: AGGCAGTGATGAGCCAAGCCTTAAAAGCCACCTTCAGTGGCTTCCAAAAGGAGCAACGACGTCTTGGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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| CDS GCA 72 bp | AGGTTACACAGCATCTGGCCGTTCATGCCAAACTGGTaGAGGTTCACATTCACCAGGCTGAACTCGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RLHSIWPFMPNW*RFTFTRLNSLV Trigger: CACCAACGAGTTCAGCCTGGTGAATGTGAACCTGCACCAGTTTGGCATGAACGGCCAGATGCTGTGTAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023612.17 ENSMUST00000232792.2 |
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