Pregenerated sensors for ETS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032035Ensembl transcript IDs: ENSMUST00000034534.13, ENSMUST00000050797.14, ENSMUST00000184887.2, ENSMUST00000238819.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTaGCCCGCCCACCCCGCAGGTCCTGACCTCCTCTTTCCGGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LLRRPLPSESLLRSY*PAHPAGPDLLFPAH Trigger: GTGGGCCGGAAAGAGGAGGTCAGGACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR TCA 90 bp | TCTGCAAGCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTaGAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SASQVQQASEKTSPF*KSAQELLPRPPRRS Trigger: GGACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGCTTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR TCA 90 bp | TCTCAGCAGGGTTCCCCCAGCCCCTTCCTTCTGCGCGTCTGTCCATaGCTAGTCAGCATCCGGCTTTACATCCAGCATGGCGTGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: SQQGSPSPFLLRVCP*LVSIRLYIQHGVQL Trigger: GAGCTGCACGCCATGCTGGATGTAAAGCCGGATGCTGACTAGTCATGGACAGACGCGCAGAAGGAAGGGGCTGGGGGAACCCTGCTGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184887.2 |
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| 3UTR CCA 90 bp | GCGCGTCTGTCCATGACTAGTCAGCATCCGGCTTTACATCCAGCATaGCGTGCAGCTCTTCAGGGGTGTATCCCAGCAGGCTCTGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: ARLSMTSQHPALHPA*RAALQGCIPAGSAG Trigger: ACCTGCAGAGCCTGCTGGGATACACCCCTGAAGAGCTGCACGCCATGCTGGATGTAAAGCCGGATGCTGACTAGTCATGGACAGACGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184887.2 |
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| 3UTR TCA 90 bp | GTGGACCTAGGGAGAAAGGGCATCAAGGCAGGCAAGTCAGCACGCTaGGGAGTGTGGGAGACACTTTCTTATGTCTTCTCTGCTAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: VDLGRKGIKAGKSAR*GVWETLSYVFSARG Trigger: TCCCCTAGCAGAGAAGACATAAGAAAGTGTCTCCCACACTCCTCAGCGTGCTGACTTGCCTGCCTTGATGCCCTTTCTCCCTAGGTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR CCA 90 bp | TCCTGGGATGGTCTCTGGCCTTCGGAGGAGATGGGGGAAAGCATCTaGCCAGATGGACAACAAAGCTGTCTGACTAATATACTATCTACA | + |
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Preference number: 1 (lower is better) Translates to: SWDGLWPSEEMGESI*PDGQQSCLTNILST Trigger: TGTAGATAGTATATTAGTCAGACAGCTTTGTTGTCCATCTGGCCAGATGCTTTCCCCCATCTCCTCCGAAGGCCAGAGACCATCCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR TCA 90 bp | CAAAGTAGAGGAGAACTGAGAATGTTAGTTTGGAATGGCATGCATTaGGGCCTTAAGACCCTCGGGGTAATGCCCATGCAAACGGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: QSRGELRMLVWNGMH*GLKTLGVMPMQTAF Trigger: AAAAGCCGTTTGCATGGGCATTACCCCGAGGGTCTTAAGGCCTCAATGCATGCCATTCCAAACTAACATTCTCAGTTCTCCTCTACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR TCA 90 bp | ACCCACAATGGCTTATTTTCAGGTCTCCTCTCCCATCAGGCAGGATaGTGGCTGCCTCAATTAAGTCTGAGTTTAAACTTGGAGGAAACT | + |
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Preference number: 1 (lower is better) Translates to: THNGLFSGLLSHQAG*WLPQLSLSLNLEET Trigger: AGTTTCCTCCAAGTTTAAACTCAGACTTAATTGAGGCAGCCATCATCCTGCCTGATGGGAGAGGAGACCTGAAAATAAGCCATTGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR TCA 90 bp | AGGAGATGGGGGAAAGCATCTGGCCAGATGGACAACAAAGCTGTCTaGCTAATATACTATCTACAAATCCTGAAAAGTGGTGGACCTAGG | + |
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Preference number: 1 (lower is better) Translates to: RRWGKASGQMDNKAV*LIYYLQILKSGGPR Trigger: CCTAGGTCCACCACTTTTCAGGATTTGTAGATAGTATATTAGTCAGACAGCTTTGTTGTCCATCTGGCCAGATGCTTTCCCCCATCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR TCA 90 bp | TGGAGTCGCCCAGCTAGGTCAGATCTGTTCATCCTTCCTGTGAAGTaGACGTGTTTTAAAAGAGCATCAATGCAGCAATGCTGCTACATT | + |
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Preference number: 1 (lower is better) Translates to: WSRPARSDLFILPVK*TCFKRASMQQCCYI Trigger: AATGTAGCAGCATTGCTGCATTGATGCTCTTTTAAAACACGTTCACTTCACAGGAAGGATGAACAGATCTGACCTAGCTGGGCGACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR TCA 90 bp | AATGATGGAGTCGCCCAGCTAGGTCAGATCTGTTCATCCTTCCTGTaGAGTGAACGTGTTTTAAAAGAGCATCAATGCAGCAATGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: NDGVAQLGQICSSFL*SERVLKEHQCSNAA Trigger: AGCAGCATTGCTGCATTGATGCTCTTTTAAAACACGTTCACTTCACAGGAAGGATGAACAGATCTGACCTAGCTGGGCGACTCCATCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR GCA 90 bp | CAGGTTAATCCTGCTCCTTGGATTTCGTTTCCAAGACTTGAACTGTaGTATGATGCCGACGATTCCATAGAAGAGCTGCAGAATACATTC | + |
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Preference number: 1 (lower is better) Translates to: QVNPAPWISFPRLEL*YDADDSIEELQNTF Trigger: GAATGTATTCTGCAGCTCTTCTATGGAATCGTCGGCATCATAGCACAGTTCAAGTCTTGGAAACGAAATCCAAGGAGCAGGATTAACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR CCA 90 bp | GAGTTTGGGGTCTCTGATCTCAGTACAGAACTGGGATTTTTCCAATaGGGTCTATATAAACAGTTGTCTTTCACTGTGACAAGAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: EFGVSDLSTELGFFQ*GLYKQLSFTVTRVL Trigger: GAGGACTCTTGTCACAGTGAAAGACAACTGTTTATATAGACCCCATTGGAAAAATCCCAGTTCTGTACTGAGATCAGAGACCCCAAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| 3UTR TCA 90 bp | ACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTaGTCATTCCTCCCACTAGTAGATCCACAACTCAAGATGAATTTT | + |
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Preference number: 1 (lower is better) Translates to: THKTDWLSSISFISM*SFLPLVDPQLKMNF Trigger: AAAATTCATCTTGAGTTGTGGATCTACTAGTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGTAAGACCTCTCCCTTCTaGAAGTCTGCTCAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PLPSESLLRSYCPAHPAGKTSPF*KSAQEL Trigger: TAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTT...ACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCCCCCAGCCCCTTCCTTCTGCGCGTCTGTCCATGACTAGTCAGCATCCGTCCAACCAACAGGGTTaGTCTTTGAAAGGTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GFPQPLPSARLSMTSQHPSNQQG*SLKGLS Trigger: GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGA...CGGATGCTGACTAGTCATGGACAGACGCGCAGAAGGAAGGGGCTGGGGGAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184887.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCTCCAACCAACAGGGTTaGTCTTTGAAAGGTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRPLPSESLLRSYCPAHPSNQQG*SLKGLS Trigger: GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGA...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAACAGGGTTGCTCTTTaGAAGGTCTCAGCAGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: ARSNRLLRRPLPSESLLRNRVAL*KVSAGF Trigger: GAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTT...CCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCTCCAACCAACAGGGTTaGTCTTTGAAAGGTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLRRPLPSESLLRSYCPASNQQG*SLKGLS Trigger: GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGA...GGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCAACAGGGTTGCTCTTTaGAAGGTCTCAGCAGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: NRLLRRPLPSESLLRSYCNRVAL*KVSAGF Trigger: GAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTT...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCAATGGGGTCTATATAAACAGTTGTCTTTCACTGTGACAAGAGTCCTCAGCGCCCACCCACAAAACTaGCTGGCTTTCATCAATCTC | + |
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Preference number: 2 (lower is better) Translates to: FQWGLYKQLSFTVTRVLSAHPQN*LAFINL Trigger: GAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGGGC...GCTGAGGACTCTTGTCACAGTGAAAGACAACTGTTTATATAGACCCCATTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| 3UTR CAA 90 bp | ACCTGCATTTGTAAGATCAAAATATATAGCTGGAATGTTTGGCCTTaGCTTCCTTGTGGGGATGCTCCACTCAGTCAGTACAGAACACCC | + |
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Preference number: 2 (lower is better) Translates to: TCICKIKIYSWNVWP*LPCGDAPLSQYRTP Trigger: GGGTGTTCTGTACTGACTGAGTGGAGCATCCCCACAAGGAAGCAAAGGCCAAACATTCCAGCTATATATTTTGATCTTACAAATGCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR-3UTR TCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATAACAGGGTTGCTCTTTaGAAGGTCTCAGCAGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHNRVAL*KVSAGF Trigger: GAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTT...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACGCCCACCCACAAAACTaGCTGGCTTTCATCAATCTC | + |
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Preference number: 2 (lower is better) Translates to: CDKSPQPANNNKLTILQYAHPQN*LAFINL Trigger: GAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGGGC...GTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCGGGGTAATGCCCATGCAAACGGCTTTTATTCTGAGTCTTCCATGTTTCGTTAATCCTGCTCCTTaGATTTCGTTTCCAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: TLGVMPMQTAFILSLPCFVNPAP*ISFPRL Trigger: AAGTCTTGGAAACGAAATCCAAGGAGCAGGATTAAC...GAAACATGGAAGACTCAGAATAAAAGCCGTTTGCATGGGCATTACCCCGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR-3UTR GCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCAACCAACAGGGTTaGTCTTTGAAAGGTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHSNQQG*SLKGLS Trigger: GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGA...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGACAACAAAGCTGTCTGACTAATATACTATCTACAAATCCTGAAAAGTGGAAGACCTCTCCCTTCTaGAAGTCTGCTCAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: DGQQSCLTNILSTNPEKWKTSPF*KSAQEL Trigger: TAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTT...CCACTTTTCAGGATTTGTAGATAGTATATTAGTCAGACAGCTTTGTTGTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR-3UTR TCA 90 bp | GGTCTATATAAACAGTTGTCTTTCACTGTGACAAGAGTCCTCAGCCAGCAAATAAGTTTAGTAATCCCCTaGAGAAACTGTTTTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GLYKQLSFTVTRVLSQQISLVIP*RNCFQP Trigger: GGGCTGAAAACAGTTTCTTCAGGGGATTACTAAACT...TATTTGCTGGCTGAGGACTCTTGTCACAGTGAAAGACAACTGTTTATATAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| 3UTR-3UTR TCA 90 bp | GTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACTAGTTTAGTAATCCCCTaGAGAAACTGTTTTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: VTRVLSQQITTNSQYCNTSLVIP*RNCFQP Trigger: GGGCTGAAAACAGTTTCTTCAGGGGATTACTAAACT...AGTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGACAACAAAGCTGTCTGACTAATATACTATCTACAAATCCTGAAAAGTGGCAATATGGAGAAGGGTaGAGACTTGGGGAAGTGATT | + |
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Preference number: 2 (lower is better) Translates to: DGQQSCLTNILSTNPEKWQYGEG*RLGEVI Trigger: AATCACTTCCCCAAGTCTTCACCCTTCTCCATATTG...CCACTTTTCAGGATTTGTAGATAGTATATTAGTCAGACAGCTTTGTTGTCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR-3UTR CCA 90 bp | TGTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACACCCACAAAACTGACTaGCTTTCATCAATCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: CDKSPQPANNNKLTILQYTHKTD*LSSISF Trigger: GAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGT...GTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTATATAAACAGTTGTCTTTCACTGTGACAAGAGTCCTCAGCCAGCAAATACTGGGATTTTTCCAATaGGGTCTATATAAACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: GLYKQLSFTVTRVLSQQILGFFQ*GLYKQL Trigger: CAACTGTTTATATAGACCCCATTGGAAAAATCCCAG...TATTTGCTGGCTGAGGACTCTTGTCACAGTGAAAGACAACTGTTTATATAGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| 3UTR CCA 72 bp | GTCCTGACCTCCTCTTTCCGGCCCACCAATGGCCAATaGAATACAGCGGCGCTCCCTCAGCTCCCACCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VLTSSFRPTNGQ*NTAALPQLPPL Trigger: CAGGGGTGGGAGCTGAGGGAGCGCCGCTGTATTCCATTGGCCATTGGTGGGCCGGAAAGAGGAGGTCAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR CAA 90 bp | CGGCCCACCAATGGCCAATGGAATACAGCGGCGCTCCCTCAGCTCCCACCCCTGGTCCAACCAACAGGGTaGCTCTTTGAAAGGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: RPTNGQWNTAALPQLPPLVQPTG*LFERSQ Trigger: CTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGAC...CAGGGGTGGGAGCTGAGGGAGCGCCGCTGTATTCCATTGGCCATTGGTGGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR TCA 72 bp | GGTTCCCCCAGCCCCTTCCTTCTGCGCGTCTGTCCATaGCTAGTCAGCATCCGGCTTTACATCCAGCATGGC | + |
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Preference number: 3 (lower is better) Translates to: GSPSPFLLRVCP*LVSIRLYIQHG Trigger: GCCATGCTGGATGTAAAGCCGGATGCTGACTAGTCATGGACAGACGCGCAGAAGGAAGGGGCTGGGGGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184887.2 |
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| 3UTR GCA 72 bp | AGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTaGCCCGCCCACCCCGCAGGTCCTGACCTCCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: RPLPSESLLRSY*PAHPAGPDLLF Trigger: AAAGAGGAGGTCAGGACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR TCA 72 bp | CAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTaGAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: QVQQASEKTSPF*KSAQELLPRPP Trigger: GGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR TCA 72 bp | CACCAAGTCTTCAAAGGAGGCCGAGTCACATGCTACTaGAATACCCTCTCCACTGCCGTGGCCTCCGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: HQVFKGGRVTCY*NTLSTAVASEP Trigger: GGGCTCGGAGGCCACGGCAGTGGAGAGGGTATTTCAGTAGCATGTGACTCGGCCTCCTTTGAAGACTTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR GCA 72 bp | CGAAGGGTGAGCCTGGAGAGGCCCACCTCAGCCAATTaGCTCTCTTCTCTCAGGGATGTCACTGTCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: RRVSLERPTSAN*LSSLRDVTVTV Trigger: GACAGTGACAGTGACATCCCTGAGAGAAGAGAGGCAATTGGCTGAGGTGGGCCTCTCCAGGCTCACCCTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR CCA 72 bp | TCCATGACTAGTCAGCATCCGGCTTTACATCCAGCATaGCGTGCAGCTCTTCAGGGGTGTATCCCAGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: SMTSQHPALHPA*RAALQGCIPAG Trigger: GCCTGCTGGGATACACCCCTGAAGAGCTGCACGCCATGCTGGATGTAAAGCCGGATGCTGACTAGTCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184887.2 |
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| 3UTR CCA 72 bp | ACTCTTCCTGGGATGGTCTCTGGCCTTCGGAGGAGATaGGGGAAAGCATCTGGCCAGATGGACAACAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: TLPGMVSGLRRR*GKASGQMDNKA Trigger: AGCTTTGTTGTCCATCTGGCCAGATGCTTTCCCCCATCTCCTCCGAAGGCCAGAGACCATCCCAGGAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGGTCCAACCAACAGGGTaGCTCTTTGAAAGGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ARSNRLLRRPLPSESLLRVQPTG*LFERSQ Trigger: CTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGAC...CCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR CAA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACTCTGCTCAGGAGCTATaGCCCCGCCCACCCCGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHSAQEL*PRPPRR Trigger: CCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGA...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCTGCAAGCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAGTCCAACCAACAGGGTaGCTCTTTGAAAGGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPLQARSNRLLRRPLPSEVQPTG*LFERSQ Trigger: CTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGAC...TTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGCTTGCAGAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| 3UTR CCA 72 bp | AGCCCAAAGCCAGCCACACAGGTTAAAGCATTTCTCTaGGAAAATGATGGAGTCGCCCAGCTAGGTCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SPKPATQVKAFL*ENDGVAQLGQI Trigger: GATCTGACCTAGCTGGGCGACTCCATCATTTTCCCAGAGAAATGCTTTAACCTGTGTGGCTGGCTTTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR TCA 72 bp | GGAGAACTGAGAATGTTAGTTTGGAATGGCATGCATTaGGGCCTTAAGACCCTCGGGGTAATGCCCATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GELRMLVWNGMH*GLKTLGVMPMQ Trigger: TTGCATGGGCATTACCCCGAGGGTCTTAAGGCCTCAATGCATGCCATTCCAAACTAACATTCTCAGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR GCA 72 bp | CCTGCTCCTTGGATTTCGTTTCCAAGACTTGAACTGTaGTATGATGCCGACGATTCCATAGAAGAGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAPWISFPRLEL*YDADDSIEELQ Trigger: CTGCAGCTCTTCTATGGAATCGTCGGCATCATAGCACAGTTCAAGTCTTGGAAACGAAATCCAAGGAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR TCA 72 bp | GTCGCCCAGCTAGGTCAGATCTGTTCATCCTTCCTGTaGAGTGAACGTGTTTTAAAAGAGCATCAATGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAQLGQICSSFL*SERVLKEHQCS Trigger: GCTGCATTGATGCTCTTTTAAAACACGTTCACTTCACAGGAAGGATGAACAGATCTGACCTAGCTGGGCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR TCA 72 bp | GGCTTATTTTCAGGTCTCCTCTCCCATCAGGCAGGATaGTGGCTGCCTCAATTAAGTCTGAGTTTAAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GLFSGLLSHQAG*WLPQLSLSLNL Trigger: CAAGTTTAAACTCAGACTTAATTGAGGCAGCCATCATCCTGCCTGATGGGAGAGGAGACCTGAAAATAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR TCA 72 bp | CATTCGTTTCCTTTAGCTGTAAGAGTTTGGGGTCTCTaGTCTCAGTACAGAACTGGGATTTTTCCAATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HSFPLAVRVWGL*SQYRTGIFPMG Trigger: CCCCATTGGAAAAATCCCAGTTCTGTACTGAGATCAGAGACCCCAAACTCTTACAGCTAAAGGAAACGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| 3UTR TCA 72 bp | CCAGCTAGGTCAGATCTGTTCATCCTTCCTGTGAAGTaGACGTGTTTTAAAAGAGCATCAATGCAGCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: PARSDLFILPVK*TCFKRASMQQC Trigger: GCATTGCTGCATTGATGCTCTTTTAAAACACGTTCACTTCACAGGAAGGATGAACAGATCTGACCTAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGAAACGTCTTTGGAATGTACGTAAGAGTTCAACAGGTTTATATAGACCCGTCCAACCAACAGGGTaGCTCTTTGAAAGGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLKRLWNVRKSSTGLYRPVQPTG*LFERSQ Trigger: CTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGAC...GGGTCTATATAAACCTGTTGAACTCTTACGTACATTCCAAAGACGTTTCAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR CCA 72 bp | AGCGGTTTAACCAAAACCCAGGTTAATCCTGCTCCTTaGATTTCGTTTCCAAGACTTGAACTGTGCTATGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGLTKTQVNPAP*ISFPRLELCYD Trigger: ATCATAGCACAGTTCAAGTCTTGGAAACGAAATCCAAGGAGCAGGATTAACCTGGGTTTTGGTTAAACCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR TCA 72 bp | GGGAAAGCATCTGGCCAGATGGACAACAAAGCTGTCTaGCTAATATACTATCTACAAATCCTGAAAAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GKASGQMDNKAV*LIYYLQILKSG Trigger: ACCACTTTTCAGGATTTGTAGATAGTATATTAGTCAGACAGCTTTGTTGTCCATCTGGCCAGATGCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| 3UTR GCA 72 bp | GTCCTCAGCCAGCAAATAACAACAAACTCACAATACTaGAATACTGAGACCACCTTAGAGCTTAAGACGATA | + |
|
Preference number: 3 (lower is better) Translates to: VLSQQITTNSQY*NTETTLELKTI Trigger: TATCGTCTTAAGCTCTAAGGTGGTCTCAGTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR TCA 90 bp | CGGCCCACCAATGGCCAATGGAATACAGCGGCGCTCCCTCAGCTCCCACCCCTGCAGGCTTGTCCTTGTTaGGGTCAGCACGGTCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPTNGQWNTAALPQLPPLQACPC*GQHGHA Trigger: TGCGTGACCGTGCTGACCTCAACAAGGACAAGCCTG...CAGGGGTGGGAGCTGAGGGAGCGCCGCTGTATTCCATTGGCCATTGGTGGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | CGGCCCACCAATGGCCAATGGAATACAGCGGCGCTCCCTCAGCTCCCACCCCTGCACGCACATAGTCCTTaGAGGTGCCCTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPTNGQWNTAALPQLPPLHAHSP*RCPWAC Trigger: ACAAGCCCAAGGGCACCTTCAAGGACTATGTGCGTG...CAGGGGTGGGAGCTGAGGGAGCGCCGCTGTATTCCATTGGCCATTGGTGGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGTCGCCCACTTCCACGACTaGCTCTCCCCAGGCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLKVCSGAIAPPTPQVAHFHD*LSPGTC Trigger: ACATGTGCCTGGGGAGAGCCAGTCGTGGAAGTGGGC...GACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050797.14 |
||
| CDS-3UTR CCA 90 bp | CGGCCCACCAATGGCCAATGGAATACAGCGGCGCTCCCTCAGCTCCCACCCCTGATCCCCAACAAAGTCTaGAGCCAGCTCGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPTNGQWNTAALPQLPPLIPNKV*SQLEEA Trigger: TGCTTCCTCGAGCTGGCTCCAGACTTTGTTGGGGAT...CAGGGGTGGGAGCTGAGGGAGCGCCGCTGTATTCCATTGGCCATTGGTGGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCACCCAGTCCCGGACGTaGGTTTCTGTCCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESNQQGCSLKGLSRVPPATQSRT*VSVHCR Trigger: CCGGCAGTGGACAGAAACCCACGTCCGGGACTGGGT...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCACCCAGTCCCGGACGTaGGTTTCTGTCCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QPTGLLFERSQQGSPSPFTQSRT*VSVHCR Trigger: CCGGCAGTGGACAGAAACCCACGTCCGGGACTGGGT...GAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGGAAGTCACACGCACAGTCCCCCTGTCCCCAGATCAGCATTCGTTTCCCAGGCTTGTCCTTGTTaGGGTCAGCACGGTCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGGSHTHSPPVPRSAFVSQACPC*GQHGHA Trigger: TGCGTGACCGTGCTGACCTCAACAAGGACAAGCCTG...GGAAACGAATGCTGATCTGGGGACAGGGGGACTGTGCGTGTGACTTCCACCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCATCAAGGCAGGCAAGTCAGCACGCTGAGGAGTGTGGGAGACACTTTCACCCAGTCCCGGACGTaGGTTTCTGTCCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KGHQGRQVSTLRSVGDTFTQSRT*VSVHCR Trigger: CCGGCAGTGGACAGAAACCCACGTCCGGGACTGGGT...GAAAGTGTCTCCCACACTCCTCAGCGTGCTGACTTGCCTGCCTTGATGCCCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGACCCAGTCCCGGACGTaGGTTTCTGTCCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSNRLLRRPLPSESLLRTQSRT*VSVHCR Trigger: CCGGCAGTGGACAGAAACCCACGTCCGGGACTGGGT...CCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGTCCTCTCAAAAGAGTCCTaGCCCCCGAGTTTACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLKVCSGAIAPPTPQVLSKES*PPSLPR Trigger: TCGTGGTAAACTCGGGGGCCAGGACTCTTTTGAGAG...GACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | AACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCCTGCTCCAGGACTGGGTaGGGCGGTCACAACTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: NQQGCSLKGLSRVPPAPSCSRTG*GGHNYR Trigger: ACGATAGTTGTGACCGCCTCACCCAGTCCTGGAGCA...GGAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCTGCACATTCCATGTCTaGGCCGCAGTGTTCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRPLPSESLLRSYCPAHPCTFHV*AAVFKA Trigger: GGCCTTGAACACTGCGGCTCAGACATGGAATGTGCA...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGTCTGCAGGATCTCTAGATaGTCCCACAGGATATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLKVCSGAIAPPTPQVCRISR*SHRISP Trigger: TGGGGATATCCTGTGGGAGCATCTAGAGATCCTGCA...GACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGTCCTAATTCCAGAAGAAACTaGCACAGCTGGATCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSESLLRSYCPAHPAGPNSRRN*HSWIGP Trigger: TGGGCCGATCCAGCTGTGGCAGTTTCTTCTGGAATT...AGGACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCTGGCTGCTCCAGGACTaGGTGAGGCGGTCACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: ESNQQGCSLKGLSRVPPAWLLQD*VRRSQL Trigger: TAGTTGTGACCGCCTCACCCAGTCCTGGAGCAGCCA...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCGAGGTGCAGAGAAAGTaGAGGGGCTGCCCACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVQPTGLLFERSQQGSPSEVQRK*RGCPQW Trigger: CCACTGTGGGCAGCCCCTCCACTTTCTCTGCACCTC...GCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCCCACACCTTTCAGGCTaGACTCATTCACAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRPLPSESLLRSYCPAHPPHLSG*THSQPT Trigger: TGTGGGCTGTGAATGAGTTCAGCCTGAAAGGTGTGG...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | CAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCTGGGTTTCTGTCCACTaGCGGGGGTCTTTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QPTGLLFERSQQGSPSPFWVSVH*RGSLGI Trigger: AATCCCCAAAGACCCCCGGCAGTGGACAGAAACCCA...GAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCCCGAGTTTACCACGACTaGCTCTCCCCAGGCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: NQQGCSLKGLSRVPPAPSRVYHD*LSPGTC Trigger: ACATGTGCCTGGGGAGAGCCAGTCGTGGTAAACTCG...GGAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCCGAGTTTACCACGACTaGCTCTCCCCAGGCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: QPTGLLFERSQQGSPSPFRVYHD*LSPGTC Trigger: ACATGTGCCTGGGGAGAGCCAGTCGTGGTAAACTCG...GAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCCTCTCAAAAGAGTCCTaGCCCCCGAGTTTACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RRPLPSESLLRSYCPAHPLSKES*PPSLPR Trigger: TCGTGGTAAACTCGGGGGCCAGGACTCTTTTGAGAG...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCGCTTTACATCCAGCATaGCGTGCAGCTCTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESNQQGCSLKGLSRVPPAALHPA*RAALQG Trigger: CCCCTGAAGAGCTGCACGCCATGCTGGATGTAAAGC...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | CAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCCCACACCTTTCAGGCTaGACTCATTCACAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QPTGLLFERSQQGSPSPFPHLSG*THSQPT Trigger: TGTGGGCTGTGAATGAGTTCAGCCTGAAAGGTGTGG...GAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCTGGGTTTCTGTCCACTaGCGGGGGTCTTTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLRRPLPSESLLRSYCPAWVSVH*RGSLGI Trigger: AATCCCCAAAGACCCCCGGCAGTGGACAGAAACCCA...GGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCACCCAGGGCACACAGTaGTGCTCCACTCATACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESNQQGCSLKGLSRVPPATQGTQ*CSTHTE Trigger: TTCTGTATGAGTGGAGCAGCACTGTGTGCCCTGGGT...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCAGAAAGTGGAGGGGCTaGCCACAGTGGGATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RVQPTGLLFERSQQGSPSRKWRG*PQWDPH Trigger: ATGTGGATCCCACTGTGGGCAGCCCCTCCACTTTCT...GCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCATCCCCAACAAAGTCTaGAGCCAGCTCGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPTGLLFERSQQGSPSPFIPNKV*SQLEEA Trigger: TGCTTCCTCGAGCTGGCTCCAGACTTTGTTGGGGAT...GAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCCGGTGTAACAGGATTCTaGGTAGGTAGGGTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQQGCSLKGLSRVPPAPSGVTGF*VGRVGS Trigger: GGAGCCAACCCTACCTACCCAGAATCCTGTTACACC...GGAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCTCTCAAAAGAGTCCTaGCCCCCGAGTTTACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: ESNQQGCSLKGLSRVPPALSKES*PPSLPR Trigger: TCGTGGTAAACTCGGGGGCCAGGACTCTTTTGAGAG...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCCCTGGCCACCTCATCTaGGTCAGAAAGCTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RRPLPSESLLRSYCPAHPPGHLI*VRKLEF Trigger: GAATTCAAGCTTTCTGACCCAGATGAGGTGGCCAGG...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCGAGGGTCCTGGAGAATaGCAGAAGGGTAGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQPTGLLFERSQQGSPSEGPGE*QKGSRS Trigger: AGAACGACTACCCTTCTGTCATTCTCCAGGACCCTC...GCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCGAGGGTCCTGGAGAATaGCAGAAGGGTAGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRRPLPSESLLRSYCPAEGPGE*QKGSRS Trigger: AGAACGACTACCCTTCTGTCATTCTCCAGGACCCTC...GGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCTGCAAGCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAACAGGCTGTTGAAGGATaGCTGGCTGCTCCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLQARSNRLLRRPLPSEQAVEG*LAAPGL Trigger: CAGTCCTGGAGCAGCCAGTCATCCTTCAACAGCCTG...TTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGCTTGCAGAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGGGATTCCCAGTCGCTaGTGTTCTTTTGTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPLPSESLLRSYCPAHPGIPSR*CSFVKP Trigger: TGGTTTCACAAAAGAACAGCAGCGACTGGGAATCCC...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCAGGGCACACAGTGCTaGTCCACTCATACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ESNQQGCSLKGLSRVPPAQGTQC*STHTEL Trigger: AAGTTCTGTATGAGTGGAGCAGCACTGTGTGCCCTG...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGACCCAGGGCACACAGTaGTGCTCCACTCATACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARSNRLLRRPLPSESLLRTQGTQ*CSTHTE Trigger: TTCTGTATGAGTGGAGCAGCACTGTGTGCCCTGGGT...CCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | CAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCTGCAGGATCTCTAGATaGTCCCACAGGATATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPTGLLFERSQQGSPSPFCRISR*SHRISP Trigger: TGGGGATATCCTGTGGGAGCATCTAGAGATCCTGCA...GAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCAATTCCAGAAGAAACTaGCACAGCTGGATCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESNQQGCSLKGLSRVPPANSRRN*HSWIGP Trigger: TGGGCCGATCCAGCTGTGGCAGTTTCTTCTGGAATT...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CGGCCCACCAATGGCCAATGGAATACAGCGGCGCTCCCTCAGCTCCCACCCCTGTCCATTAACCTGATATaGTTTCACATCCTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPTNGQWNTAALPQLPPLSINLI*FHILFL Trigger: CAGAAAGAGGATGTGAAACCATATCAGGTTAATGGA...CAGGGGTGGGAGCTGAGGGAGCGCCGCTGTATTCCATTGGCCATTGGTGGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCGGTGTAACAGGATTCTaGGTAGGTAGGGTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRRPLPSESLLRSYCPAGVTGF*VGRVGS Trigger: GGAGCCAACCCTACCTACCCAGAATCCTGTTACACC...GGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | GCCCACCTCAGCCAATTGCCTCTCTTCTCTCAGGGATGTCACTGTCACTGTCTTGAGGGTCCTGGAGAATaGCAGAAGGGTAGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHLSQLPLFSQGCHCHCLEGPGE*QKGSRS Trigger: AGAACGACTACCCTTCTGTCATTCTCCAGGACCCTC...AAGACAGTGACAGTGACATCCCTGAGAGAAGAGAGGCAATTGGCTGAGGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| CDS-3UTR TCA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCTGCTCCAGGACTGGGTaGGGCGGTCACAACTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: NRLLRRPLPSESLLRSYCCSRTG*GGHNYR Trigger: ACGATAGTTGTGACCGCCTCACCCAGTCCTGGAGCA...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCACATCATTTCTTTGCTaGTCGGAGTTAACAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRPLPSESLLRSYCPAHPTSFLC*SELTAG Trigger: TCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGT...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCTGCAAGCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAATGGGTTTCTGTCCACTaGCGGGGGTCTTTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FPLQARSNRLLRRPLPSEWVSVH*RGSLGI Trigger: AATCCCCAAAGACCCCCGGCAGTGGACAGAAACCCA...TTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGCTTGCAGAGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCTGCAGGATCTCTAGATaGTCCCACAGGATATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRRPLPSESLLRSYCPACRISR*SHRISP Trigger: TGGGGATATCCTGTGGGAGCATCTAGAGATCCTGCA...GGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | CAAACCGCAGGTGGAAGTCACACGCACAGTCCCCCTGTCCCCAGATCAGCATTCTTCACATCCTCTTTCTaGAGGATCTCTAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTAGGSHTHSPPVPRSAFFTSSF*RISRCS Trigger: GGAGCATCTAGAGATCCTGCAGAAAGAGGATGTGAA...GAATGCTGATCTGGGGACAGGGGGACTGTGCGTGTGACTTCCACCTGCGGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGCCTGGCCACCTCATCTaGGTCAGAAAGCTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ARSNRLLRRPLPSESLLRPGHLI*VRKLEF Trigger: GAATTCAAGCTTTCTGACCCAGATGAGGTGGCCAGG...CCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | ACGCACAGTCCCCCTGTCCCCAGATCAGCATTCGTTTCCTTTAGCTGTAAGAGTCCACACCTTTCAGGCTaGACTCATTCACAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: THSPPVPRSAFVSFSCKSPHLSG*THSQPT Trigger: TGTGGGCTGTGAATGAGTTCAGCCTGAAAGGTGTGG...ACTCTTACAGCTAAAGGAAACGAATGCTGATCTGGGGACAGGGGGACTGTGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCTTAACACCTCTTGCTTaGTGGCAAAGTAGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRPLPSESLLRSYCPAHPLTPLA*WQSSLS Trigger: AGACAGACTACTTTGCCATCAAGCAAGAGGTGTTAA...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGGCATCAAGGCAGGCAAGTCAGCACGCTGAGGAGTGTGGGAGACACTTTCGGGATTCCCAGTCGCTaGTGTTCTTTTGTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KGHQGRQVSTLRSVGDTFGIPSR*CSFVKP Trigger: TGGTTTCACAAAAGAACAGCAGCGACTGGGAATCCC...GAAAGTGTCTCCCACACTCCTCAGCGTGCTGACTTGCCTGCCTTGATGCCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| CDS-3UTR GCA 90 bp | CTAGTCAGCATCCGGCTTTACATCCAGCATGGCGTGCAGCTCTTCAGGGGTGTAGGGATTCCCAGTCGCTaGTGTTCTTTTGTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSIRLYIQHGVQLFRGVGIPSR*CSFVKP Trigger: TGGTTTCACAAAAGAACAGCAGCGACTGGGAATCCC...TACACCCCTGAAGAGCTGCACGCCATGCTGGATGTAAAGCCGGATGCTGACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184887.2 |
||
| CDS-3UTR GCA 90 bp | AACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCCCTTCCTTCACATCCTCTTTCTaGAGGATCTCTAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQQGCSLKGLSRVPPAPSFTSSF*RISRCS Trigger: GGAGCATCTAGAGATCCTGCAGAAAGAGGATGTGAA...GGAAGGGGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGTCCTTCCATTAACCTGATATaGTTTCACATCCTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSESLLRSYCPAHPAGPSINLI*FHILFL Trigger: CAGAAAGAGGATGTGAAACCATATCAGGTTAATGGA...AGGACCTGCGGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | ACGCACAGTCCCCCTGTCCCCAGATCAGCATTCGTTTCCTTTAGCTGTAAGAGTGGTGTAACAGGATTCTaGGTAGGTAGGGTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THSPPVPRSAFVSFSCKSGVTGF*VGRVGS Trigger: GGAGCCAACCCTACCTACCCAGAATCCTGTTACACC...ACTCTTACAGCTAAAGGAAACGAATGCTGATCTGGGGACAGGGGGACTGTGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCTGCAAGCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAACAGGGCACACAGTGCTaGTCCACTCATACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLQARSNRLLRRPLPSEQGTQC*STHTEL Trigger: AAGTTCTGTATGAGTGGAGCAGCACTGTGTGCCCTG...TTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGCTTGCAGAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCTTTGCTGATGATAATTaGACTGGAAGCCGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVQPTGLLFERSQQGSPSFADDN*TGSRRS Trigger: TGACCTGCGGCTTCCAGTCCAATTATCATCAGCAAA...GCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGCAGCTGATAAAGGACTaGCAAGACTTATCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSNRLLRRPLPSESLLRQLIKD*QDLSVS Trigger: ACTCACTGATAAGTCTTGTCAGTCCTTTATCAGCTG...CCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCTGCAGGATCTCTAGATaGTCCCACAGGATATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRLLRRPLPSESLLRSYCCRISR*SHRISP Trigger: TGGGGATATCCTGTGGGAGCATCTAGAGATCCTGCA...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGGAAGTCACACGCACAGTCCCCCTGTCCCCAGATCAGCATTCGTTTCCTCCATTAACCTGATATaGTTTCACATCCTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGGSHTHSPPVPRSAFVSSINLI*FHILFL Trigger: CAGAAAGAGGATGTGAAACCATATCAGGTTAATGGA...GGAAACGAATGCTGATCTGGGGACAGGGGGACTGTGCGTGTGACTTCCACCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCTGGCCACCTCATCTaGGTCAGAAAGCTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: NRLLRRPLPSESLLRSYCPGHLI*VRKLEF Trigger: GAATTCAAGCTTTCTGACCCAGATGAGGTGGCCAGG...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCTCGCCACTGCAGGATaGGGTGCAGAGAAAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKLTGFHQSLSSQCDLATAG*GAEKVE Trigger: CTCCACTTTCTCTGCACCTCATCCTGCAGTGGCGAG...ATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | ACGCACAGTCCCCCTGTCCCCAGATCAGCATTCGTTTCCTTTAGCTGTAAGAGTACATCATTTCTTTGCTaGTCGGAGTTAACAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: THSPPVPRSAFVSFSCKSTSFLC*SELTAG Trigger: TCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGT...ACTCTTACAGCTAAAGGAAACGAATGCTGATCTGGGGACAGGGGGACTGTGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCGGGATTCCCAGTCGCTaGTGTTCTTTTGTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NRLLRRPLPSESLLRSYCGIPSR*CSFVKP Trigger: TGGTTTCACAAAAGAACAGCAGCGACTGGGAATCCC...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAATGGGGTCTATATAAACAGTTGTCTTTCACTGTGACAAGAGTCCTCAGCTGGCTGCTCCAGGACTaGGTGAGGCGGTCACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: FQWGLYKQLSFTVTRVLSWLLQD*VRRSQL Trigger: TAGTTGTGACCGCCTCACCCAGTCCTGGAGCAGCCA...GCTGAGGACTCTTGTCACAGTGAAAGACAACTGTTTATATAGACCCCATTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| CDS-3UTR TCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATCAGGCTGTTGAAGGATaGCTGGCTGCTCCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHQAVEG*LAAPGL Trigger: CAGTCCTGGAGCAGCCAGTCATCCTTCAACAGCCTG...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCGACAAGACTTATCAGTaGGTAATTCCAGAAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLRRPLPSESLLRSYCPADKTYQ*VIPEET Trigger: AGTTTCTTCTGGAATTACTCACTGATAAGTCTTGTC...GGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCACATCATTTCTTTGCTaGTCGGAGTTAACAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRLLRRPLPSESLLRSYCTSFLC*SELTAG Trigger: TCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGT...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCTCCATTAACCTGATATaGTTTCACATCCTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRRPLPSESLLRSYCPASINLI*FHILFL Trigger: CAGAAAGAGGATGTGAAACCATATCAGGTTAATGGA...GGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCGAGTTTACCACGACTaGCTCTCCCCAGGCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKLTGFHQSLSSQCDRVYHD*LSPGTC Trigger: ACATGTGCCTGGGGAGAGCCAGTCGTGGTAAACTCG...ATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCTGTTGAAGGATGACTaGCTGCTCCAGGACTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKLTGFHQSLSSQCDLLKDD*LLQDWV Trigger: CACCCAGTCCTGGAGCAGCCAGTCATCCTTCAACAG...ATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAATGGGGTCTATATAAACAGTTGTCTTTCACTGTGACAAGAGTCCTCAGCGCTTTACATCCAGCATaGCGTGCAGCTCTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQWGLYKQLSFTVTRVLSALHPA*RAALQG Trigger: CCCCTGAAGAGCTGCACGCCATGCTGGATGTAAAGC...GCTGAGGACTCTTGTCACAGTGAAAGACAACTGTTTATATAGACCCCATTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
||
| CDS-3UTR TCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATCACGCACATAGTCCTTaGAGGTGCCCTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHHAHSP*RCPWAC Trigger: ACAAGCCCAAGGGCACCTTCAAGGACTATGTGCGTG...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCAGCTGATAAAGGACTaGCAAGACTTATCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NRLLRRPLPSESLLRSYCQLIKD*QDLSVS Trigger: ACTCACTGATAAGTCTTGTCAGTCCTTTATCAGCTG...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTCGGGGTAATGCCCATGCAAACGGCTTTTATTCTGAGTCTTCCATGTTTCACATCATTTCTTTGCTaGTCGGAGTTAACAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLGVMPMQTAFILSLPCFTSFLC*SELTAG Trigger: TCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGT...GAAACATGGAAGACTCAGAATAAAAGCCGTTTGCATGGGCATTACCCCGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| CDS-3UTR GCA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACTGGGTTTCTGTCCACTaGCGGGGGTCTTTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHWVSVH*RGSLGI Trigger: AATCCCCAAAGACCCCCGGCAGTGGACAGAAACCCA...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATCTGTTGAAGGATGACTaGCTGCTCCAGGACTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHLLKDD*LLQDWV Trigger: CACCCAGTCCTGGAGCAGCCAGTCATCCTTCAACAG...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | ACAATTAAAAATGAAGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCGCTTTACATCCAGCATaGCGTGCAGCTCTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIKNEESNQQGCSLKGLSALHPA*RAALQG Trigger: CCCCTGAAGAGCTGCACGCCATGCTGGATGTAAAGC...GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCTTCATTTTTAATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
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| CDS-3UTR TCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATCCACACCTTTCAGGCTaGACTCATTCACAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHPHLSG*THSQPT Trigger: TGTGGGCTGTGAATGAGTTCAGCCTGAAAGGTGTGG...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR TCA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACGAGGGTCCTGGAGAATaGCAGAAGGGTAGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHEGPGE*QKGSRS Trigger: AGAACGACTACCCTTCTGTCATTCTCCAGGACCCTC...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR GCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATACCCAGGGCACACAGTaGTGCTCCACTCATACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHTQGTQ*CSTHTE Trigger: TTCTGTATGAGTGGAGCAGCACTGTGTGCCCTGGGT...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATATCCCCAACAAAGTCTaGAGCCAGCTCGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHIPNKV*SQLEEA Trigger: TGCTTCCTCGAGCTGGCTCCAGACTTTGTTGGGGAT...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR CCA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACATCCCCAACAAAGTCTaGAGCCAGCTCGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHIPNKV*SQLEEA Trigger: TGCTTCCTCGAGCTGGCTCCAGACTTTGTTGGGGAT...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR GCA 90 bp | TGTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACCAGGGCACACAGTGCTaGTCCACTCATACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CDKSPQPANNNKLTILQYQGTQC*STHTEL Trigger: AAGTTCTGTATGAGTGGAGCAGCACTGTGTGCCCTG...GTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR GCA 90 bp | ACAATTAAAAATGAAGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCCAGGGCACACAGTGCTaGTCCACTCATACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TIKNEESNQQGCSLKGLSQGTQC*STHTEL Trigger: AAGTTCTGTATGAGTGGAGCAGCACTGTGTGCCCTG...GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCTTCATTTTTAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR GCA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACAATTCCAGAAGAAACTaGCACAGCTGGATCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHNSRRN*HSWIGP Trigger: TGGGCCGATCCAGCTGTGGCAGTTTCTTCTGGAATT...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
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| CDS-3UTR GCA 90 bp | GTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACTGGGACATCATTTCTTTaGTGCTCGGAGTTAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTRVLSQQITTNSQYCNTGTSFL*CSELTA Trigger: CGCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCC...AGTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| CDS-3UTR GCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTTCACATCCTCTTTCTaGAGGATCTCTAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHFTSSF*RISRCS Trigger: GGAGCATCTAGAGATCCTGCAGAAAGAGGATGTGAA...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR GCA 90 bp | ACAATTAAAAATGAAGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCTTCACATCCTCTTTCTaGAGGATCTCTAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIKNEESNQQGCSLKGLSFTSSF*RISRCS Trigger: GGAGCATCTAGAGATCCTGCAGAAAGAGGATGTGAA...GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCTTCATTTTTAATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR CCA 90 bp | GTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACTCTCATACAGAACTTCTaGAAGTCCACACCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRVLSQQITTNSQYCNTLIQNF*KSTPFR Trigger: CCTGAAAGGTGTGGACTTCCAGAAGTTCTGTATGAG...AGTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| CDS-3UTR TCA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACTTGGCTCCATTAACCTaGTATGGTTTCACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHLAPLT*YGFTSS Trigger: AGAGGATGTGAAACCATATCAGGTTAATGGAGCCAA...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR TCA 90 bp | GTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACTTTAACACCTCTTGCTTaGTGGCAAAGTAGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTRVLSQQITTNSQYCNTLTPLA*WQSSLS Trigger: AGACAGACTACTTTGCCATCAAGCAAGAGGTGTTAA...AGTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACTTAACACCTCTTGCTTaGTGGCAAAGTAGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDKSPQPANNNKLTILQYLTPLA*WQSSLS Trigger: AGACAGACTACTTTGCCATCAAGCAAGAGGTGTTAA...GTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
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| CDS-3UTR TCA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTTAACACCTCTTGCTTaGTGGCAAAGTAGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHLTPLA*WQSSLS Trigger: AGACAGACTACTTTGCCATCAAGCAAGAGGTGTTAA...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR TCA 90 bp | ACAATTAAAAATGAAGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCCAGCTGATAAAGGACTaGCAAGACTTATCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TIKNEESNQQGCSLKGLSQLIKD*QDLSVS Trigger: ACTCACTGATAAGTCTTGTCAGTCCTTTATCAGCTG...GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCTTCATTTTTAATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
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| CDS-3UTR TCA 90 bp | GTGACAAGAGTCCTCAGCCAGCAAATAACAACAAACTCACAATACTGCAATACTGACAAGACTTATCAGTaGGTAATTCCAGAAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTRVLSQQITTNSQYCNTDKTYQ*VIPEET Trigger: AGTTTCTTCTGGAATTACTCACTGATAAGTCTTGTC...AGTATTGCAGTATTGTGAGTTTGTTGTTATTTGCTGGCTGAGGACTCTTGTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| CDS-3UTR TCA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACGACAAGACTTATCAGTaGGTAATTCCAGAAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHDKTYQ*VIPEET Trigger: AGTTTCTTCTGGAATTACTCACTGATAAGTCTTGTC...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
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| CDS CCA 90 bp | TTCAGGCTGAACTCATTCACAGCCCACATCACCCAGTCCCGGACGTaGGTTTCTGTCCACTGCCGGGGGTCTTTGGGGATTCCCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLNSFTAHITQSRT*VSVHCRGSLGIPSR Trigger: GCGACTGGGAATCCCCAAAGACCCCCGGCAGTGGACAGAAACCCACGTCCGGGACTGGGTGATGTGGGCTGTGAATGAGTTCAGCCTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | CGGCCCACCAATGGCCAATGGAATACAGCGGCGCTCCCTCAGCTCCCACCCCTGTGGGACATCATTTCTTaGCTGCTCGGAGTTAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPTNGQWNTAALPQLPPLWDIIS*LLGVNS Trigger: GCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCCA...CAGGGGTGGGAGCTGAGGGAGCGCCGCTGTATTCCATTGGCCATTGGTGGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | CAAACCGCAGGTGGAAGTCACACGCACAGTCCCCCTGTCCCCAGATCAGCATTCACAGGCTTGTCCTTGTaGAGGTCAGCACGGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QTAGGSHTHSPPVPRSAFTGLSL*RSARSR Trigger: GCGTGACCGTGCTGACCTCAACAAGGACAAGCCTGT...GAATGCTGATCTGGGGACAGGGGGACTGTGCGTGTGACTTCCACCTGCGGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| CDS-3UTR CAA 90 bp | CGTCTGTCCATGACTAGTCAGCATCCGGCTTTACATCCAGCATGGCGTGCAGCTATGGTGAGAGTCGGCTaGAGATCGACGGCCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLSMTSQHPALHPAWRAAMVRVG*RSTAAF Trigger: GAAGGCGGCCGTCGATCTCAAGCCGACTCTCACCAT...AGCTGCACGCCATGCTGGATGTAAAGCCGGATGCTGACTAGTCATGGACAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184887.2 |
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| CDS-3UTR CAA 90 bp | AGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCCCCGCCCACCCCGCAGGAATGACAGGCTaGTCCTTGTTGAGGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRPLPSESLLRSYCPAHPAGMTG*SLLRSA Trigger: TGCTGACCTCAACAAGGACAAGCCTGTCATTCCTGC...GGGGTGGGCGGGGCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCACCCGCTGCAGGCTGTaGAAGGATGACTGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NRLLRRPLPSESLLRSYCTRCRL*KDDWLL Trigger: GAGCAGCCAGTCATCCTTCAACAGCCTGCAGCGGGT...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
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| CDS TCA 90 bp | CTGCTCCACTCATACAGAACTTCTGGAAGTCCACACCTTTCAGGCTaGACTCATTCACAGCCCACATCACCCAGTCCCGGACGTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLHSYRTSGSPHLSG*THSQPTSPSPGRGF Trigger: AAACCCACGTCCGGGACTGGGTGATGTGGGCTGTGAATGAGTTCAGCCTGAAAGGTGTGGACTTCCAGAAGTTCTGTATGAGTGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS GCA 90 bp | GTCTGGAGCCAGCTCGAGGAAGCATTCTTTACCCAGGGCACACAGTaGTGCTCCACTCATACAGAACTTCTGGAAGTCCACACCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VWSQLEEAFFTQGTQ*CSTHTELLEVHTFQ Trigger: CTGAAAGGTGTGGACTTCCAGAAGTTCTGTATGAGTGGAGCAGCACTGTGTGCCCTGGGTAAAGAATGCTTCCTCGAGCTGGCTCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGAAGTCACACGCACAGTCCCCCTGTCCCCAGATCAGCATTCGTTTCCAGTAGCTTTCAAGGCTaGGGACATCATTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGGSHTHSPPVPRSAFVSSSFQG*GHHFFA Trigger: AGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACT...GGAAACGAATGCTGATCTGGGGACAGGGGGACTGTGCGTGTGACTTCCACCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000184887.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCCAGTAGCTTTCAAGGCTaGGGACATCATTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESNQQGCSLKGLSRVPPASSFQG*GHHFFA Trigger: AGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACT...GGCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCATGACAGGCTTGTCCTaGTTGAGGTCAGCACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NRLLRRPLPSESLLRSYCMTGLS*LRSARS Trigger: TGACCGTGCTGACCTCAACAAGGACAAGCCTGTCAT...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATATGGTGAGAGTCGGCTaGAGATCGACGGCCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPPTKLTGFHQSLSSQCDMVRVG*RSTAAF Trigger: GAAGGCGGCCGTCGATCTCAAGCCGACTCTCACCAT...ATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 |
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| CDS-3UTR CAA 90 bp | AGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCAGGGTTCCCCCAGCAGTAGCTTTCAAGGCTaGGGACATCATTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVQPTGLLFERSQQGSPSSSFQG*GHHFFA Trigger: AGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACT...GCTGGGGGAACCCTGCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CAA 90 bp | ACAATTAAAAATGAAGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCATGGTGAGAGTCGGCTaGAGATCGACGGCCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TIKNEESNQQGCSLKGLSMVRVG*RSTAAF Trigger: GAAGGCGGCCGTCGATCTCAAGCCGACTCTCACCAT...GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCTTCATTTTTAATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 |
||
| CDS-3UTR CAA 90 bp | AACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTCTGCTCAGGAGCTATTGCTGGGACATCATTTCTTaGCTGCTCGGAGTTAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NRLLRRPLPSESLLRSYCWDIIS*LLGVNS Trigger: GCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCCA...GCAATAGCTCCTGAGCAGACTTTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCTGCAAGCCAGGTCCAACAGGCTTCTGAGAAGACCTCTCCCTTCTGAAAGTAGCTTTCAAGGCTaGGGACATCATTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPLQARSNRLLRRPLPSESSFQG*GHHFFA Trigger: AGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACT...TTCAGAAGGGAGAGGTCTTCTCAGAAGCCTGTTGGACCTGGCTTGCAGAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS-3UTR CAA 90 bp | AAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATTCCTCCCACACAGGCTTGTCCTTGTaGAGGTCAGCACGGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: KLTGFHQSLSSQCDHSSHTGLSL*RSARSR Trigger: GCGTGACCGTGCTGACCTCAACAAGGACAAGCCTGT...GTGGGAGGAATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
||
| CDS CCA 90 bp | CGCTGCTGTTCTTTTGTGAAACCACTGAAAGTAGCTTTCAAGGCTTaGGACATCATTTCTTTGCTGCTCGGAGTTAACAGCGGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: RCCSFVKPLKVAFKA*DIISLLLGVNSGTS Trigger: AGATGTCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACTTTCAGTGGTTTCACAAAAGAACAGCAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
||
| CDS CCA 90 bp | CTCGATACCGTAGCTGATGAAGTAATCCGAGGTGTAACAGGATTCTaGGTAGGTAGGGTTGGCTCCATTAACCTGATATGGTTTCACATC | + |
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Preference number: 5 (lower is better) Translates to: LDTVADEVIRGVTGF*VGRVGSINLIWFHI Trigger: GATGTGAAACCATATCAGGTTAATGGAGCCAACCCTACCTACCCAGAATCCTGTTACACCTCGGATTACTTCATCAGCTACGGTATCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | AACATAAGACAAAGTAGAGGAGAACTGAGAATGTTAGTTTGGAATGGCATGCATACCCGCTGCAGGCTGTaGAAGGATGACTGGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: NIRQSRGELRMLVWNGMHTRCRL*KDDWLL Trigger: GAGCAGCCAGTCATCCTTCAACAGCCTGCAGCGGGT...ATGCATGCCATTCCAAACTAACATTCTCAGTTCTCCTCTACTTTGTCTTATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| CDS-3UTR CAA 90 bp | CCACCCACAAAACTGACTGGCTTTCATCAATCTCTTTCATCTCAATGTGATCATATGACAGGCTTGTCCTaGTTGAGGTCAGCACGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PPTKLTGFHQSLSSQCDHMTGLS*LRSARS Trigger: TGACCGTGCTGACCTCAACAAGGACAAGCCTGTCAT...ATGATCACATTGAGATGAAAGAGATTGATGAAAGCCAGTCAGTTTTGTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | ACAATTAAAAATGAAGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCGCAGGAATGACAGGCTaGTCCTTGTTGAGGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TIKNEESNQQGCSLKGLSAGMTG*SLLRSA Trigger: TGCTGACCTCAACAAGGACAAGCCTGTCATTCCTGC...GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCTTCATTTTTAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034534.13 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | ACAATTAAAAATGAAGAGTCCAACCAACAGGGTTGCTCTTTGAAAGGTCTCAGCTCTGGGTCAGAAAGCTaGAATTCCCAGCCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TIKNEESNQQGCSLKGLSSGSES*NSQPSP Trigger: AGGAGATGGCTGGGAATTCAAGCTTTCTGACCCAGA...GCTGAGACCTTTCAAAGAGCAACCCTGTTGGTTGGACTCTTCATTTTTAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000238819.2 |
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| CDS-3UTR CAA 90 bp | AACATAAGACAAAGTAGAGGAGAACTGAGAATGTTAGTTTGGAATGGCATGCATTCTGGGTCAGAAAGCTaGAATTCCCAGCCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: NIRQSRGELRMLVWNGMHSGSES*NSQPSP Trigger: AGGAGATGGCTGGGAATTCAAGCTTTCTGACCCAGA...ATGCATGCCATTCCAAACTAACATTCTCAGTTCTCCTCTACTTTGTCTTATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034534.13 |
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| CDS GCA 72 bp | CACATCACCCAGTCCCGGACGTGGGTTTCTGTCCACTaGCGGGGGTCTTTGGGGATTCCCAGTCGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HITQSRTWVSVH*RGSLGIPSRCC Trigger: ACAGCAGCGACTGGGAATCCCCAAAGACCCCCGGCAGTGGACAGAAACCCACGTCCGGGACTGGGTGATGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS TCA 72 bp | AAAGCGTTAATAGGACCCTGCCTCGCCACTGCAGGATaGGGTGCAGAGAAAGTGGAGGGGCTGCCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: KALIGPCLATAG*GAEKVEGLPTV Trigger: CACTGTGGGCAGCCCCTCCACTTTCTCTGCACCTCATCCTGCAGTGGCGAGGCAGGGTCCTATTAACGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
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| CDS CCA 72 bp | AACTCATTCACAGCCCACATCACCCAGTCCCGGACGTaGGTTTCTGTCCACTGCCGGGGGTCTTTGGGGATT | + |
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Preference number: 6 (lower is better) Translates to: NSFTAHITQSRT*VSVHCRGSLGI Trigger: AATCCCCAAAGACCCCCGGCAGTGGACAGAAACCCACGTCCGGGACTGGGTGATGTGGGCTGTGAATGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS GCA 72 bp | ATCTTCAAAAGCGTTAATAGGACCCTGCCTCGCCACTaGAGGATGAGGTGCAGAGAAAGTGGAGGGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: IFKSVNRTLPRH*RMRCRESGGAA Trigger: GGCAGCCCCTCCACTTTCTCTGCACCTCATCCTGCAGTGGCGAGGCAGGGTCCTATTAACGCTTTTGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
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| CDS CAA 72 bp | GGCCCACTTCCACGACTGGCTCTCCCCAGGCACATGTaGTCTGGAGTTAACACCTCTTGCTTGATGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GPLPRLALPRHM*SGVNTSCLMAK Trigger: CTTTGCCATCAAGCAAGAGGTGTTAACTCCAGACAACATGTGCCTGGGGAGAGCCAGTCGTGGAAGTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050797.14 |
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| CDS GCA 72 bp | CAGCTCGAGGAAGCATTCTTTACCCAGGGCACACAGTaGTGCTCCACTCATACAGAACTTCTGGAAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QLEEAFFTQGTQ*CSTHTELLEVH Trigger: GTGGACTTCCAGAAGTTCTGTATGAGTGGAGCAGCACTGTGTGCCCTGGGTAAAGAATGCTTCCTCGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS TCA 72 bp | TCATACAGAACTTCTGGAAGTCCACACCTTTCAGGCTaGACTCATTCACAGCCCACATCACCCAGTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: SYRTSGSPHLSG*THSQPTSPSPG Trigger: TCCGGGACTGGGTGATGTGGGCTGTGAATGAGTTCAGCCTGAAAGGTGTGGACTTCCAGAAGTTCTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS GCA 72 bp | TATGGTTTCACATCCTCTTTCTGCAGGATCTCTAGATaGTCCCACAGGATATCCCCAACAAAGTCTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: YGFTSSFCRISR*SHRISPTKSGA Trigger: GGCTCCAGACTTTGTTGGGGATATCCTGTGGGAGCATCTAGAGATCCTGCAGAAAGAGGATGTGAAACCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS CAA 90 bp | GTGAAACCACTGAAAGTAGCTTTCAAGGCTTGGGACATCATTTCTTaGCTGCTCGGAGTTAACAGCGGGACATCTGCACATTCCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: VKPLKVAFKAWDIIS*LLGVNSGTSAHSMS Trigger: GGACATGGAATGTGCAGATGTCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACTTTCAGTGGTTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 |
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| CDS CAA 90 bp | GTGAAACCACTGAAAGTAGCTTTCAAGGCTTGGGACATCATTTCTTaGCTGCTCGGAGTTAACAGCGGGACATCTGCACATTCCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: VKPLKVAFKAWDIIS*LLGVNSGTSAHSMS Trigger: AGACATGGAATGTGCAGATGTCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACTTTCAGTGGTTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238819.2 |
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| CDS CCA 72 bp | GTAGCTGATGAAGTAATCCGAGGTGTAACAGGATTCTaGGTAGGTAGGGTTGGCTCCATTAACCTGATATGG | + |
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Preference number: 6 (lower is better) Translates to: VADEVIRGVTGF*VGRVGSINLIW Trigger: CCATATCAGGTTAATGGAGCCAACCCTACCTACCCAGAATCCTGTTACACCTCGGATTACTTCATCAGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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| CDS CAA 72 bp | CTGAAAGTAGCTTTCAAGGCTTGGGACATCATTTCTTaGCTGCTCGGAGTTAACAGCGGGACATCTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: LKVAFKAWDIIS*LLGVNSGTSAH Trigger: ATGTGCAGATGTCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCCAAGCCTTGAAAGCTACTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034534.13 ENSMUST00000050797.14 ENSMUST00000184887.2 ENSMUST00000238819.2 |
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