Pregenerated sensors for ETNK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070644Ensembl transcript IDs: ENSMUST00000129213.2, ENSMUST00000135222.9
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACCAGGAGAAGGGGTGGCTGGATGGCATCCGGCTTGGAGAAGCTaGCAGCCTCAGATGAGGCAGCTGCTGGAGGAGCTGTGGAGCGAG | + |
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Preference number: 1 (lower is better) Translates to: GPGEGVAGWHPAWRS*QPQMRQLLEELWSE Trigger: CTCGCTCCACAGCTCCTCCAGCAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAAGCCGGATGCCATCCAGCCACCCCTTCTCCTGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 90 bp | CCCGCCTTGCCCCAGGGTGCCCAACTCCAAGGCAGAAAGGCACCCTaGGGAGCAGATCTGGCAGCAAGAGGACATGGAGAAACAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: PALPQGAQLQGRKAP*GADLAARGHGETGG Trigger: GCCTCCTGTTTCTCCATGTCCTCTTGCTGCCAGATCTGCTCCCCAGGGTGCCTTTCTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 90 bp | CATGGCAGCAGCACAAGGAGGGGACCAGGAGAAGGGGTGGCTGGATaGCATCCGGCTTGGAGAAGCTGGCAGCCTCAGATGAGGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: HGSSTRRGPGEGVAG*HPAWRSWQPQMRQL Trigger: CAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAAGCCGGATGCCATCCAGCCACCCCTTCTCCTGGTCCCCTCCTTGTGCTGCTGCCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 90 bp | CTCCAGGTCTACCATCCTCTTCTCTGCAGGGACCTAGCAGGAGCATaGCAGCAGCACAAGGAGGGGACCAGGAGAAGGGGTGGCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: LQVYHPLLCRDLAGA*QQHKEGTRRRGGWM Trigger: CATCCAGCCACCCCTTCTCCTGGTCCCCTCCTTGTGCTGCTGCCATGCTCCTGCTAGGTCCCTGCAGAGAAGAGGATGGTAGACCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR GCA 90 bp | AAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCGTGGGTaGCCGCCTTGCCCCAGGGTGCCCAACTCCAAGGCAGAAAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: KMRSSLASTGSLLRG*PPCPRVPNSKAERH Trigger: GTGCCTTTCTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR GCA 90 bp | GCAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTTGGCTTCCTaGTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: AAGTSPQDDKPELAS*WLGAQYLSQEAYGS Trigger: TGAGCCGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 90 bp | CAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCGTaGGTGCCCGCCTTGCCCCAGGGTGCCCAACTCCAAGGCAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: QENEVFIGIHWEPSP*VPALPQGAQLQGRK Trigger: CTTTCTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 90 bp | GAGCGAGTGCAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTTaGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: ERVQLGPLPRMTSQS*LPAGLELSTSHRRH Trigger: ATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTGCACTCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR GCA 90 bp | TGGTACCCAAGGTCATGCTTGCTCCAGGTCTACCATCCTCTTCTCTaGAGGGACCTAGCAGGAGCATGGCAGCAGCACAAGGAGGGGACC | + |
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Preference number: 1 (lower is better) Translates to: WYPRSCLLQVYHPLL*RDLAGAWQQHKEGT Trigger: GGTCCCCTCCTTGTGCTGCTGCCATGCTCCTGCTAGGTCCCTGCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 90 bp | GCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTTGGCTTCCTGCTaGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGGCTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: AGTSPQDDKPELASC*LGAQYLSQEAYGSV Trigger: AACTGAGCCGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR GCA 90 bp | AAGAGGATGCTGGCTCTGGTGCCTGCCCTCTGGTACCCAAGGTCATaGTTGCTCCAGGTCTACCATCCTCTTCTCTGCAGGGACCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: KRMLALVPALWYPRS*LLQVYHPLLCRDLA Trigger: TGCTAGGTCCCTGCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGCCAGCATCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR GCA 90 bp | CCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTTCTAGGTaGCTAGGCCCTGCCCCCTTGCCTTCCGCCATTCAGTTCCACATG | + |
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Preference number: 1 (lower is better) Translates to: PSVSGHVLVTVLASR*LGPAPLPSAIQFHM Trigger: CATGTGGAACTGAATGGCGGAAGGCAAGGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 90 bp | AAGGAAGAGAAGTGGAAGAGGATGCTGGCTCTGGTGCCTGCCCTCTaGTACCCAAGGTCATGCTTGCTCCAGGTCTACCATCCTCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: KEEKWKRMLALVPAL*YPRSCLLQVYHPLL Trigger: GAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGCCAGCATCCTCTTCCACTTCTCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGCTGGCTTCTAGGTGCCTAGGCCCTGCCCCCTTGCCTTCCGCCATTCAGGGCATACGGCTCAGTTaGAGGCCTGGGGTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TVLASRCLGPAPLPSAIQGIRLS*RPGVGV Trigger: CACCCCCACCCCAGGCCTCCAACTGAGCCGTATGCC...CTGAATGGCGGAAGGCAAGGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGGCCATGTCCTGGTAACTGTGCTGGCTTCTAGGTGCCTAGGCCCTGCCCCCCCAAGCCTAGCAGGATaGAGGGTTTTCCCCACGCCC | + |
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Preference number: 2 (lower is better) Translates to: SGHVLVTVLASRCLGPAPPSLAG*RVFPTP Trigger: GGGCGTGGGGAAAACCCTTCATCCTGCTAGGCTTGG...GGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGTTACCAGGACATGGCCAGA 62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGTGGAGCGAGTGCAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTCGCCTTGCCCCAGGGTaGCCAACTCCAAGGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GAVERVQLGPLPRMTSQSRLAPG*PTPRQK Trigger: TTTCTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCG...ACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTGCACTCGCTCCACAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGCTGGCTTCTAGGTGCCTAGGCCCTGCCCCCTTGCCTTCCGCCATTCAGGACCTCTCCCCAGGATaGCAAGCCAGAGTTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TVLASRCLGPAPLPSAIQDLSPG*QARVGF Trigger: GAAGCCAACTCTGGCTTGTCATCCTGGGGAGAGGTC...CTGAATGGCGGAAGGCAAGGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CAA 90 bp | CAATGCTGGGACTCAGCCCCTCCAAACAGGAAAATGAGGTCTTCATaGGCATCCACTGGGAGCCTTCTCCGTGGGTGCCCGCCTTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: QCWDSAPPNRKMRSS*ASTGSLLRGCPPCP Trigger: GGGGCAAGGCGGGCACCCACGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCTGAGTCCCAGCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTGGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGCCCCACGCCCAATGCTaGGACTCAGCCCCTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: QSWLPAGLELSTSHRRHTPHAQC*DSAPPN Trigger: GTTTGGAGGGGCTGAGTCCCAGCATTGGGCGTGGGG...CGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CAA 90 bp | AGGATGCTGGCTCTGGTGCCTGCCCTCTGGTACCCAAGGTCATGCTaGCTCCAGGTCTACCATCCTCTTCTCTGCAGGGACCTAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RMLALVPALWYPRSC*LQVYHPLLCRDLAG Trigger: TCCTGCTAGGTCCCTGCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGCCAGCATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTACCGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGAGCTGTGGAGCGAGTaGAGCTGGGACCTCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GYRAGNTFSIWPCPGNCAELWSE*SWDLSP Trigger: TGGGGAGAGGTCCCAGCTGCACTCGCTCCACAGCTC...AGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCGGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCGTGGGTGCCCGCCCCTGGGGAGCAGATCTaGCAGCAAGAGGACATGGAG | + |
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Preference number: 2 (lower is better) Translates to: ENEVFIGIHWEPSPWVPAPGEQI*QQEDME Trigger: CTCCATGTCCTCTTGCTGCCAGATCTGCTCCCCAGG...GGCGGGCACCCACGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR GCA 90 bp | CGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTTCCGCCTTGCCCCAGGGTaGCCAACTCCAAGGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RAGNTFSIWPCPGNCAGFRLAPG*PTPRQK Trigger: TTTCTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCG...GAAGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | ACCGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTCCGGCTTGGAGAAGCTaGCAGCCTCAGATGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TELATPSVSGHVLVTVLAPAWRS*QPQMRQ Trigger: CTGCCTCATCTGAGGCTGCCAGCTTCTCCAAGCCGG...AGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | ACCGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTAGAGGATGCTGGCTCTaGTGCCTGCCCTCTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: TELATPSVSGHVLVTVLARGCWL*CLPSGT Trigger: GGTACCAGAGGGCAGGCACCAGAGCCAGCATCCTCT...AGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTGGCAGAAAGGCACCCTaGGGAGCAGATCTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LSPSKQENEVFIGIHWEPGRKAP*GADLAA Trigger: TGCTGCCAGATCTGCTCCCCAGGGTGCCTTTCTGCC...AGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCCTGCTGGAGGAGCTGTaGAGCGAGTGCAGCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: CPLAFRHSVPHGKILVKFLLEEL*SECSWD Trigger: GTCCCAGCTGCACTCGCTCCACAGCTCCTCCAGCAG...GAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTGACCAGGAGAAGGGGTaGCTGGATGGCATCCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PAPLPSAIQFHMGRSWLSDQEKG*LDGIRL Trigger: AAGCCGGATGCCATCCAGCCACCCCTTCTCCTGGTC...ACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | ACCGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTAGTGGAAGAGGATGCTaGCTCTGGTGCCTGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TELATPSVSGHVLVTVLASGRGC*LWCLPS Trigger: AGAGGGCAGGCACCAGAGCCAGCATCCTCTTCCACT...AGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CAA 90 bp | GTCCTGGTAACTGTGCTGGCTTCTAGGTGCCTAGGCCCTGCCCCCTaGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: VLVTVLASRCLGPAP*PSAIQFHMGRSWLS Trigger: ACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGTTACCAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGTGGAGCGAGTGCAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTCTCCAAACAGGAAAATaGGGTCTTCATTGGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: GAVERVQLGPLPRMTSQSLQTGK*GLHWHP Trigger: TGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAG...ACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTGCACTCGCTCCACAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCAGGCAGAAAGGCACCCTaGGGAGCAGATCTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: APLPSAIQFHMGRSWLSSGRKAP*GADLAA Trigger: TGCTGCCAGATCTGCTCCCCAGGGTGCCTTTCTGCC...TGAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTAGCTCTAGCAGTGCCTaGGCTGGCAACTGTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PAPLPSAIQFHMGRSWLSSSSSA*AGNCAL Trigger: GAGAGCACAGTTGCCAGCCCAGGCACTGCTAGAGCT...ACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCTGGTACCCAAGGTCATGCTTGCTCCAGGTCTACCATCCTCTTCTCTGCATGACAAGCCAGAGTTaGCTTCCTGCTGGCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ALWYPRSCLLQVYHPLLCMTSQS*LPAGLE Trigger: CTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCAT...GCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCTGGGGAGCAGATCTaGCAGCAAGAGGACATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SPSKQENEVFIGIHWEPSPGEQI*QQEDME Trigger: CTCCATGTCCTCTTGCTGCCAGATCTGCTCCCCAGG...AGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCAAGCTCTAGCAGTGCCTaGGCTGGCAACTGTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: APLPSAIQFHMGRSWLSSSSSSA*AGNCAL Trigger: GAGAGCACAGTTGCCAGCCCAGGCACTGCTAGAGCT...TGAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | ACCGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTATGACAAGCCAGAGTTaGCTTCCTGCTGGCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TELATPSVSGHVLVTVLAMTSQS*LPAGLE Trigger: CTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCAT...AGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCATACCATCCTCTTCTCTaGAGGGACCTAGCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: APLPSAIQFHMGRSWLSSYHPLL*RDLAGA Trigger: TGCTCCTGCTAGGTCCCTGCAGAGAAGAGGATGGTA...TGAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR TCA 90 bp | AATGCAGAAAACCATAATCTACAAATGAATCACAGTAGGGGCCTATACCAGACTGCTGGCAGCCTCAGATaGGGCAGCTGCTGGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: NAENHNLQMNHSRGLYQTAGSLR*GSCWRS Trigger: GCTCCTCCAGCAGCTGCCTCATCTGAGGCTGCCAGC...AGTCTGGTATAGGCCCCTACTGTGATTCATTTGTAGATTATGGTTTTCTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | AATGCAGAAAACCATAATCTACAAATGAATCACAGTAGGGGCCTATACCAGACTGGATGGCATCCGGCTTaGAGAAGCTGGCAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NAENHNLQMNHSRGLYQTGWHPA*RSWQPQ Trigger: CTGAGGCTGCCAGCTTCTCCAAGCCGGATGCCATCC...AGTCTGGTATAGGCCCCTACTGTGATTCATTTGTAGATTATGGTTTTCTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR-3UTR CCA 90 bp | AATGCAGAAAACCATAATCTACAAATGAATCACAGTAGGGGCCTATACCAGACTCTGGTGCCTGCCCTCTaGTACCCAAGGTCATGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NAENHNLQMNHSRGLYQTLVPAL*YPRSCL Trigger: CAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAG...AGTCTGGTATAGGCCCCTACTGTGATTCATTTGTAGATTATGGTTTTCTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR GCA 72 bp | TCTTCATTGGCATCCACTGGGAGCCTTCTCCGTGGGTaGCCGCCTTGCCCCAGGGTGCCCAACTCCAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SSLASTGSLLRG*PPCPRVPNSKA Trigger: TGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCCCAGTGGATGCCAATGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 72 bp | GAAGGGGTGGCTGGATGGCATCCGGCTTGGAGAAGCTaGCAGCCTCAGATGAGGCAGCTGCTGGAGGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: EGVAGWHPAWRS*QPQMRQLLEEL Trigger: CAGCTCCTCCAGCAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAAGCCGGATGCCATCCAGCCACCCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR CCA 72 bp | GGACCAGGAGAAGGGGTGGCTGGATGGCATCCGGCTTaGAGAAGCTGGCAGCCTCAGATGAGGCAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GPGEGVAGWHPA*RSWQPQMRQLL Trigger: CAGCAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAAGCCGGATGCCATCCAGCCACCCCTTCTCCTGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| 3UTR GCA 72 bp | CTCTGGTGCCTGCCCTCTGGTACCCAAGGTCATGCTTaGTCCAGGTCTACCATCCTCTTCTCTGCAGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LWCLPSGTQGHA*SRSTILFSAGT Trigger: GGTCCCTGCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR GCA 72 bp | CTGGCTCTGGTGCCTGCCCTCTGGTACCCAAGGTCATaGTTGCTCCAGGTCTACCATCCTCTTCTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LALVPALWYPRS*LLQVYHPLLCR Trigger: CCTGCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CCA 72 bp | CAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTTaGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QLGPLPRMTSQS*LPAGLELSTSH Trigger: GTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR GCA 72 bp | ACCTCTCCCCAGGATGACAAGCCAGAGTTGGCTTCCTaGTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSPQDDKPELAS*WLGAQYLSQEA Trigger: TGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCATCCTGGGGAGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CCA 72 bp | TCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTaGGAGCCTTCTCCGTGGGTGCCCGCCTTGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SKQENEVFIGIH*EPSPWVPALPQ Trigger: CTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR GCA 72 bp | AGGTCATGCTTGCTCCAGGTCTACCATCCTCTTCTCTaGAGGGACCTAGCAGGAGCATGGCAGCAGCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RSCLLQVYHPLL*RDLAGAWQQHK Trigger: CTTGTGCTGCTGCCATGCTCCTGCTAGGTCCCTGCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CCA 72 bp | TCTCCCCAGGATGACAAGCCAGAGTTGGCTTCCTGCTaGCTTGGAGCTCAGTACCTCTCACAGGAGGCATAC | + |
|
Preference number: 3 (lower is better) Translates to: SPQDDKPELASC*LGAQYLSQEAY Trigger: GTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCATCCTGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CCA 72 bp | AAGTGGAAGAGGATGCTGGCTCTGGTGCCTGCCCTCTaGTACCCAAGGTCATGCTTGCTCCAGGTCTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: KWKRMLALVPAL*YPRSCLLQVYH Trigger: ATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGCCAGCATCCTCTTCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR GCA 72 bp | AAAAGGAAGAGAAGTGGAAGAGGATGCTGGCTCTGGTaGCTGCCCTCTGGTACCCAAGGTCATGCTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRKRSGRGCWLW*LPSGTQGHACS Trigger: GGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGCCAGCATCCTCTTCCACTTCTCTTCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTGGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGAAAATGAGGTCTTCATaGGCATCCACTGGGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QSWLPAGLELSTSHRRHTKMRSS*ASTGSL Trigger: AAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTT...CGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGCCATGTCCTGGTAACTGTGCTGGCTTCTAGGTGCCTAGGCCCTGCCCCCCCACATGGGAAGATCTaGGTTAAGTTCAGAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGHVLVTVLASRCLGPAPPHGKI*VKFRIK Trigger: TTTTATTCTGAACTTAACCAAGATCTTCCCATGTGG...GGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGTTACCAGGACATGGCCAGA 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCCTTCTCCGTGGGTGCCCGCCTTGCCCCAGGGTGCCCAACTCCAAGGCAGGCCGCTCCACCTCCCTaGGGGATGCAGCTGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAFSVGARLAPGCPTPRQAAPPP*GMQLSP Trigger: AGGGGACAGCTGCATCCCCCAGGGAGGTGGAGCGGC...CTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CAA 72 bp | GGCATCCACTGGGAGCCTTCTCCGTGGGTGCCCGCCTaGCCCCAGGGTGCCCAACTCCAAGGCAGAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIHWEPSPWVPA*PQGAQLQGRKA Trigger: TGCCTTTCTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCCCAGTGGATGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGTGGAGCGAGTGCAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTGCCGCTCCACCTCCCTaGGGGATGCAGCTGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAVERVQLGPLPRMTSQSAAPPP*GMQLSP Trigger: AGGGGACAGCTGCATCCCCCAGGGAGGTGGAGCGGC...ACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTGCACTCGCTCCACAGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CAA 72 bp | GGGACCAGGAGAAGGGGTGGCTGGATGGCATCCGGCTaGGAGAAGCTGGCAGCCTCAGATGAGGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTRRRGGWMASG*EKLAASDEAAA Trigger: AGCAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAAGCCGGATGCCATCCAGCCACCCCTTCTCCTGGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | GGGTACCGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGCCGCAGCTCCCGAATaGGGCGCAGGGCACCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYRAGNTFSIWPCPGNCAAAAPE*GAGHRG Trigger: TCCCCGGTGCCCTGCGCCTCATTCGGGAGCTGCGGC...AGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCGGTACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGGTGCCTGCCCTCTGGTACCCAAGGTCATGCTTGCTCCAGGTCTACCCTCCTCCATGCTCCATaGGCACTGCGGGCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLWCLPSGTQGHACSRSTLLHAP*ALRARL Trigger: GAGCCTTGCCCGCAGTGCTCATGGAGCATGGAGGAG...GGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCCTTCTCCGTGGGTGCCCGCCTTGCCCCAGGGTGCCCAACTCCAAGGCAGCTGGTTCTGTATGAGTaGCCAGAGTGCCCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAFSVGARLAPGCPTPRQLVLYE*PECPEE Trigger: TTCTTCTGGGCACTCTGGGCACTCATACAGAACCAG...CTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGGCTCAGTTGGAGGCCCCGCCTTCTCCTCCATaGTCCATGAGCACTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLELSTSHRRHTAQLEAPPSPP*SMSTAG Trigger: GCCCGCAGTGCTCATGGAGCATGGAGGAGAAGGCGG...GGCCTCCAACTGAGCCGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCCTTCTCCGTGGGTGCCCGCCTTGCCCCAGGGTGCCCAACTCCAAGGCAGAGTGCCCAGAAGAAATaGGATGCCAGAGCGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAFSVGARLAPGCPTPRQSAQKK*DARANL Trigger: CAAATTCGCTCTGGCATCTCATTTCTTCTGGGCACT...CTGCCTTGGAGTTGGGCACCCTGGGGCAAGGCGGGCACCCACGGAGAAGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTGGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGCCACCAGCAACTCCGTaGGCTCCCCATACACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSWLPAGLELSTSHRRHTPPATP*APHTPG Trigger: TCCGGGTGTATGGGGAGCGCACGGAGTTGCTGGTGG...CGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CAA 72 bp | GCTCTGGTGCCTGCCCTCTGGTACCCAAGGTCATGCTaGCTCCAGGTCTACCATCCTCTTCTCTGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVPALWYPRSC*LQVYHPLLCRD Trigger: GTCCCTGCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGCAGGCACCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTGGCTTCTAGGTGCCTAGGCCCTGCCCCCTTGCCTTCCGCCATTCAGCCAACACCTCCACTTTaGGGACATCTGCAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLASRCLGPAPLPSAIQPTPPL*GHLQKG Trigger: GCCTTTCTGCAGATGTCCCCAAAGTGGAGGTGTTGG...CTGAATGGCGGAAGGCAAGGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTCTGGTACCCAAGGTCATGCTTGCTCCAGGTCTACCATCCTCTTCTCTGCAGGTACAGTAGAGTTTaGGGGCGCAGCCGTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALWYPRSCLLQVYHPLLCRYSRV*GRSRVL Trigger: GAGCACACGGCTGCGCCCCCAAACTCTACTGTACCT...GCAGAGAAGAGGATGGTAGACCTGGAGCAAGCATGACCTTGGGTACCAGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTCGCAGCCACTGCACCTaGGTCTCCCGAGCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PAPLPSAIQFHMGRSWLSRSHCT*VSRAGY Trigger: GTATCCAGCTCGGGAGACCCAGGTGCAGTGGCTGCG...ACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CAA 72 bp | GACTCAGCCCCTCCAAACAGGAAAATGAGGTCTTCATaGGCATCCACTGGGAGCCTTCTCCGTGGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DSAPPNRKMRSS*ASTGSLLRGCP Trigger: CGGGCACCCACGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCTGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CAA 72 bp | CCCAGGATGACAAGCCAGAGTTGGCTTCCTGCTGGCTaGGAGCTCAGTACCTCTCACAGGAGGCATACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRMTSQSWLPAG*ELSTSHRRHTA Trigger: AGCCGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGCTTGTCATCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| 3UTR CAA 72 bp | ACTGTGCTGGCTTCTAGGTGCCTAGGCCCTGCCCCCTaGCCTTCCGCCATTCAGTTCCACATGGGAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLASRCLGPAP*PSAIQFHMGRS Trigger: AGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCAGGGCCTAGGCACCTAGAAGCCAGCACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCACCAGCAACTCCGTaGGCTCCCCATACACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSKQENEVFIGIHWEPSPPATP*APHTPG Trigger: TCCGGGTGTATGGGGAGCGCACGGAGTTGCTGGTGG...AGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGTGGAGCGAGTGCAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTGTTGCCAATGTCAAATaGCTGGTAGTTGTACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAVERVQLGPLPRMTSQSVANVK*LVVVPC Trigger: GCAGGGTACAACTACCAGGCATTTGACATTGGCAAC...ACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTGCACTCGCTCCACAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTATGCTCCATGAGCACTaGGGGCAAGGCTCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSKQENEVFIGIHWEPMLHEH*GQGSCL Trigger: GAGGCAGGAGCCTTGCCCGCAGTGCTCATGGAGCAT...AGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCCGCAGCCACTGCACCTaGGTCTCCCGAGCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLAFRHSVPHGKILVKFRSHCT*VSRAGY Trigger: GTATCCAGCTCGGGAGACCCAGGTGCAGTGGCTGCG...GAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | TTGGAGAAGCTGGCAGCCTCAGATGAGGCAGCTGCTGGAGGAGCTGTGGAGCGACAGAGTAGATCATTGTaGCAGAACACCACAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEKLAASDEAAAGGAVERQSRSL*QNTTGE Trigger: TTCCCCTGTGGTGTTCTGTCACAATGATCTACTCTG...TCGCTCCACAGCTCCTCCAGCAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTAGGTACAGTAGAGTTTaGGGGCGCAGCCGTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSKQENEVFIGIHWEPRYSRV*GRSRVL Trigger: GAGCACACGGCTGCGCCCCCAAACTCTACTGTACCT...AGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | TTGGAGAAGCTGGCAGCCTCAGATGAGGCAGCTGCTGGAGGAGCTGTGGAGCGATTGGCGTGGATGGTGTaGATCTTAGCCATTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEKLAASDEAAAGGAVERLAWMV*ILAISK Trigger: CTTAGAAATGGCTAAGATTCACACCATCCACGCCAA...TCGCTCCACAGCTCCTCCAGCAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | GGGTACCGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTCCAACACCTCCACTTTaGGGACATCTGCAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYRAGNTFSIWPCPGNCAPTPPL*GHLQKG Trigger: GCCTTTCTGCAGATGTCCCCAAAGTGGAGGTGTTGG...AGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCGGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTGGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGTATGAGTGCCCAGAGTaGCCAGAAGAAATGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QSWLPAGLELSTSHRRHTYECPE*PEEMRC Trigger: GCATCTCATTTCTTCTGGGCACTCTGGGCACTCATA...CGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGTTGGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATATATGAGTGCCCAGAGTaGCCAGAAGAAATGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ARVGFLLAWSSVPLTGGIYECPE*PEEMRC Trigger: GCATCTCATTTCTTCTGGGCACTCTGGGCACTCATA...TATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCGAGTGCAGCTGGGACCTCTCCCCAGGATGACAAGCCAGAGTTGGCTTCCGCAAACTCATTGAAATaGTTGCCAATGTCAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GASAAGTSPQDDKPELASANSLK*LPMSNA Trigger: GGCATTTGACATTGGCAACCATTTCAATGAGTTTGC...GGAAGCCAACTCTGGCTTGTCATCCTGGGGAGAGGTCCCAGCTGCACTCGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCAGCAGTTGGAAGTTTCTaGCCTCATTCTCCCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: APLPSAIQFHMGRSWLSSAVGSF*PHSPGP Trigger: TGGACCGGGAGAATGAGGTCAGAAACTTCCAACTGC...TGAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTGGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGTTGGCGTGGATGGTGTaGATCTTAGCCATTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSWLPAGLELSTSHRRHTLAWMV*ILAISK Trigger: CTTAGAAATGGCTAAGATTCACACCATCCACGCCAA...CGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTAATACTGGTTCTGTATaGGTGCCCAGAGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSKQENEVFIGIHWEPNTGSV*VPRVPR Trigger: TCTGGGCACTCTGGGCACTCATACAGAACCAGTATT...AGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCGACAGGGGAATCCAACTaGGACAGGTGTTCCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSKQENEVFIGIHWEPSPTGESN*DRCSFN Trigger: GTTGAAGGAACACCTGTCCCAGTTGGATTCCCCTGT...CGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTAATACTGGTTCTGTATaGGTGCCCAGAGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSKQENEVFIGIHWEPSNTGSV*VPRVPR Trigger: TCTGGGCACTCTGGGCACTCATACAGAACCAGTATT...AGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCGGTTGCCAATGTCAAATaGCTGGTAGTTGTACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSKQENEVFIGIHWEPSPVANVK*LVVVPC Trigger: GCAGGGTACAACTACCAGGCATTTGACATTGGCAAC...CGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCTGGTTCTGTATGAGTaGCCAGAGTGCCCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSKQENEVFIGIHWEPSLVLYE*PECPEE Trigger: TTCTTCTGGGCACTCTGGGCACTCATACAGAACCAG...AGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR TCA 90 bp | CGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTTCCACCTGCAAACTCATTaGAATGGTTGCCAATGTCAA | + |
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Preference number: 4 (lower is better) Translates to: RAGNTFSIWPCPGNCAGFHLQTH*NGCQCQ Trigger: TTGACATTGGCAACCATTTCAATGAGTTTGCAGGTG...GAAGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR TCA 90 bp | AGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTAGTGCCCAGAAGAAATaGGATGCCAGAGCGAATTTG | + |
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Preference number: 4 (lower is better) Translates to: SPSKQENEVFIGIHWEPSSAQKK*DARANL Trigger: CAAATTCGCTCTGGCATCTCATTTCTTCTGGGCACT...AGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCCGCTGATGGTAGAATACTaGTTCTGTATGAGTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSKQENEVFIGIHWEPSPLMVEY*FCMSAQ Trigger: CTGGGCACTCATACAGAACCAGTATTCTACCATCAG...CGGAGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR TCA 90 bp | CGAGCTGGCAACACCTTCAGTATCTGGCCATGTCCTGGTAACTGTGCTGGCTTCTGTCACTGTCATAGATaGTATTCTTGCAGAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: RAGNTFSIWPCPGNCAGFCHCHR*YSCRVD Trigger: ATCTACTCTGCAAGAATATCATCTATGACAGTGACA...GAAGCCAGCACAGTTACCAGGACATGGCCAGATACTGAAGGTGTTGCCAGCTCG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR TCA 90 bp | AGCCCCTCCAAACAGGAAAATGAGGTCTTCATTGGCATCCACTGGGAGCCTTCTCACCTGCAAACTCATTaGAATGGTTGCCAATGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SPSKQENEVFIGIHWEPSHLQTH*NGCQCQ Trigger: TTGACATTGGCAACCATTTCAATGAGTTTGCAGGTG...AGAAGGCTCCCAGTGGATGCCAATGAAGACCTCATTTTCCTGTTTGGAGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR CCA 90 bp | GCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCAGCAAACTCATTGAAATaGTTGCCAATGTCAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: APLPSAIQFHMGRSWLSSANSLK*LPMSNA Trigger: GGCATTTGACATTGGCAACCATTTCAATGAGTTTGC...TGAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR TCA 90 bp | TGCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCTGTCACTGTCATAGATaGTATTCTTGCAGAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: CPLAFRHSVPHGKILVKFCHCHR*YSCRVD Trigger: ATCTACTCTGCAAGAATATCATCTATGACAGTGACA...GAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR GCA 90 bp | GCCCCCTTGCCTTCCGCCATTCAGTTCCACATGGGAAGATCTTGGTTAAGTTCAAACCACATTCACACCTaGAAACTCATTGAAATGGTT | + |
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Preference number: 4 (lower is better) Translates to: APLPSAIQFHMGRSWLSSNHIHT*KLIEMV Trigger: AACCATTTCAATGAGTTTGCAGGTGTGAATGTGGTT...TGAACTTAACCAAGATCTTCCCATGTGGAACTGAATGGCGGAAGGCAAGGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR TCA 90 bp | AATGCAGAAAACCATAATCTACAAATGAATCACAGTAGGGGCCTATACCAGACTGCAGTTGGAAGTTTCTaGCCTCATTCTCCCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NAENHNLQMNHSRGLYQTAVGSF*PHSPGP Trigger: TGGACCGGGAGAATGAGGTCAGAAACTTCCAACTGC...AGTCTGGTATAGGCCCCTACTGTGATTCATTTGTAGATTATGGTTTTCTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR CCA 90 bp | AATGCAGAAAACCATAATCTACAAATGAATCACAGTAGGGGCCTATACCAGACTCTGATGGTAGAATACTaGTTCTGTATGAGTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: NAENHNLQMNHSRGLYQTLMVEY*FCMSAQ Trigger: CTGGGCACTCATACAGAACCAGTATTCTACCATCAG...AGTCTGGTATAGGCCCCTACTGTGATTCATTTGTAGATTATGGTTTTCTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS CCA 90 bp | GGACGGCGGCCCTCGGGGGCCCTGGAGGCTCCCAGCAGCCGGCGCTaGCCACCGCCTTCTCCTCCATGCTCCATGAGCACTGCGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: GRRPSGALEAPSSRR*PPPSPPCSMSTAGK Trigger: CTTGCCCGCAGTGCTCATGGAGCATGGAGGAGAAGGCGGTGGCCAGCGCCGGCTGCTGGGAGCCTCCAGGGCCCCCGAGGGCCGCCGTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS CCA 90 bp | GGCACCGGGGAGGATGTCGTCCTGTTCCACCGTGACGCTGAAGCATaGGACGGCGGCCCTCGGGGGCCCTGGAGGCTCCCAGCAGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: GTGEDVVLFHRDAEA*DGGPRGPWRLPAAG Trigger: GCCGGCTGCTGGGAGCCTCCAGGGCCCCCGAGGGCCGCCGTCCCATGCTTCAGCGTCACGGTGGAACAGGACGACATCCTCCCCGGTGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS TCA 90 bp | CTCCCAGCAGCCGGCGCTGGCCACCGCCTTCTCCTCCATGCTCCATaGGCACTGCGGGCAAGGCTCCTGCCTCCGCAGGTAAAAGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: LPAAGAGHRLLLHAP*ALRARLLPPQVKGR Trigger: TCGCCCTTTTACCTGCGGAGGCAGGAGCCTTGCCCGCAGTGCTCATGGAGCATGGAGGAGAAGGCGGTGGCCAGCGCCGGCTGCTGGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS GCA 90 bp | CTGGAGGCTCCCAGCAGCCGGCGCTGGCCACCGCCTTCTCCTCCATaGTCCATGAGCACTGCGGGCAAGGCTCCTGCCTCCGCAGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LEAPSSRRWPPPSPP*SMSTAGKAPASAGK Trigger: TTTACCTGCGGAGGCAGGAGCCTTGCCCGCAGTGCTCATGGAGCATGGAGGAGAAGGCGGTGGCCAGCGCCGGCTGCTGGGAGCCTCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS GCA 90 bp | ATGCCGTCTTTGAAGCGCTTGGTCCGAACTTGTTCGGGCTTCCAGTaGGGCCGCAGCTCCCGAATGAGGCGCAGGGCACCGGGGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: MPSLKRLVRTCSGFQ*GRSSRMRRRAPGRM Trigger: CATCCTCCCCGGTGCCCTGCGCCTCATTCGGGAGCTGCGGCCGCACTGGAAGCCCGAACAAGTTCGGACCAAGCGCTTCAAAGACGGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS TCA 90 bp | AGAGTTTGGGGGCGCAGCCGTGTGCTCGCAGCAGTTGGAAGTTTCTaGCCTCATTCTCCCGGTCCACCAGCAACTCCGTGCGCTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: RVWGRSRVLAAVGSF*PHSPGPPATPCAPH Trigger: ATGGGGAGCGCACGGAGTTGCTGGTGGACCGGGAGAATGAGGTCAGAAACTTCCAACTGCTGCGAGCACACGGCTGCGCCCCCAAACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR CAA 90 bp | GCCAGAGTTGGCTTCCTGCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATAGCGCTTGGTCCGAACTaGTTCGGGCTTCCAGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: ARVGFLLAWSSVPLTGGIALGPN*FGLPVR Trigger: CCGCACTGGAAGCCCGAACAAGTTCGGACCAAGCGC...TATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGCAGGAAGCCAACTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS GCA 90 bp | CAGCCCGTTCTGAAAGGTACAGTAGAGTTTGGGGGCGCAGCCGTGTaGTCGCAGCAGTTGGAAGTTTCTGACCTCATTCTCCCGGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: QPVLKGTVEFGGAAV*SQQLEVSDLILPVH Trigger: GTGGACCGGGAGAATGAGGTCAGAAACTTCCAACTGCTGCGAGCACACGGCTGCGCCCCCAAACTCTACTGTACCTTTCAGAACGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR CAA 90 bp | GCTGGATGGCATCCGGCTTGGAGAAGCTGGCAGCCTCAGATGAGGCAGCTGCTGGTGTGCTCGCAGCAGTaGGAAGTTTCTGACCTCATT | + |
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Preference number: 5 (lower is better) Translates to: AGWHPAWRSWQPQMRQLLVCSQQ*EVSDLI Trigger: AATGAGGTCAGAAACTTCCAACTGCTGCGAGCACAC...CAGCAGCTGCCTCATCTGAGGCTGCCAGCTTCTCCAAGCCGGATGCCATCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS TCA 90 bp | TGCCAGAGCGTGGGCTTAGGCAGGCTGCCATTGGCGTGGATGGTGTaGATCTTAGCCATTTCTAAGGCGATCAACCTGAAGAGCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: CQSVGLGRLPLAWMV*ILAISKAINLKSWG Trigger: GCCCCAGCTCTTCAGGTTGATCGCCTTAGAAATGGCTAAGATTCACACCATCCACGCCAATGGCAGCCTGCCTAAGCCCACGCTCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS-3UTR CAA 90 bp | GCTGGCTTGGAGCTCAGTACCTCTCACAGGAGGCATACGGCTCAGTTGGAGGCCGTGTGCTCGCAGCAGTaGGAAGTTTCTGACCTCATT | + |
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Preference number: 5 (lower is better) Translates to: AGLELSTSHRRHTAQLEAVCSQQ*EVSDLI Trigger: AATGAGGTCAGAAACTTCCAACTGCTGCGAGCACAC...GGCCTCCAACTGAGCCGTATGCCTCCTGTGAGAGGTACTGAGCTCCAAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 90 bp | GAATTTGTTGACTTGTGCATAAAGCCGCTCCACCTCCCTGGGGGATaGAGCTGTCCCCTTCTGCGCCTCAAGATAATAACGCAGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: EFVDLCIKPLHLPGG*SCPLLRLKIITQPL Trigger: CAGTGGCTGCGTTATTATCTTGAGGCGCAGAAGGGGACAGCTGCATCCCCCAGGGAGGTGGAGCGGCTTTATGCACAAGTCAACAAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 90 bp | GAGTGCCCAGAAGAAATGAGATGCCAGAGCGAATTTGTTGACTTGTaGATAAAGCCGCTCCACCTCCCTGGGGGATGCAGCTGTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: ECPEEMRCQSEFVDL*IKPLHLPGGCSCPL Trigger: AAGGGGACAGCTGCATCCCCCAGGGAGGTGGAGCGGCTTTATGCACAAGTCAACAAATTCGCTCTGGCATCTCATTTCTTCTGGGCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS CCA 90 bp | CGCCTCAAGATAATAACGCAGCCACTGCACCTGGGTCTCCCGAGCTaGATACCGGCTGTAATCAACCACATTCACACCTGCAAACTCATT | + |
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Preference number: 5 (lower is better) Translates to: RLKIITQPLHLGLPS*IPAVINHIHTCKLI Trigger: AATGAGTTTGCAGGTGTGAATGTGGTTGATTACAGCCGGTATCCAGCTCGGGAGACCCAGGTGCAGTGGCTGCGTTATTATCTTGAGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 90 bp | GTCAAAGCTGATGGTAGAATACTGGTTCTGTATGAGTGCCCAGAGTaGCCAGAAGAAATGAGATGCCAGAGCGAATTTGTTGACTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: VKADGRILVLYECPE*PEEMRCQSEFVDLC Trigger: GCACAAGTCAACAAATTCGCTCTGGCATCTCATTTCTTCTGGGCACTCTGGGCACTCATACAGAACCAGTATTCTACCATCAGCTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS TCA 90 bp | CTGGATACCGGCTGTAATCAACCACATTCACACCTGCAAACTCATTaGAATGGTTGCCAATGTCAAATGCCTGGTAGTTGTACCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LDTGCNQPHSHLQTH*NGCQCQMPGSCTLH Trigger: ATGCAGGGTACAACTACCAGGCATTTGACATTGGCAACCATTTCAATGAGTTTGCAGGTGTGAATGTGGTTGATTACAGCCGGTATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS CCA 72 bp | GAGGATGTCGTCCTGTTCCACCGTGACGCTGAAGCATaGGACGGCGGCCCTCGGGGGCCCTGGAGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: EDVVLFHRDAEA*DGGPRGPWRLP Trigger: TGGGAGCCTCCAGGGCCCCCGAGGGCCGCCGTCCCATGCTTCAGCGTCACGGTGGAACAGGACGACATCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS TCA 72 bp | CTTGTTCGGGCTTCCAGTGCGGCCGCAGCTCCCGAATaGGGCGCAGGGCACCGGGGAGGATGTCGTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LVRASSAAAAPE*GAGHRGGCRPV Trigger: AACAGGACGACATCCTCCCCGGTGCCCTGCGCCTCATTCGGGAGCTGCGGCCGCACTGGAAGCCCGAACAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS GCA 72 bp | TTGAAGCGCTTGGTCCGAACTTGTTCGGGCTTCCAGTaGGGCCGCAGCTCCCGAATGAGGCGCAGGGCACCG | + |
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Preference number: 6 (lower is better) Translates to: LKRLVRTCSGFQ*GRSSRMRRRAP Trigger: CGGTGCCCTGCGCCTCATTCGGGAGCTGCGGCCGCACTGGAAGCCCGAACAAGTTCGGACCAAGCGCTTCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS TCA 72 bp | GGGCGCAGCCGTGTGCTCGCAGCAGTTGGAAGTTTCTaGCCTCATTCTCCCGGTCCACCAGCAACTCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: GRSRVLAAVGSF*PHSPGPPATPC Trigger: GCACGGAGTTGCTGGTGGACCGGGAGAATGAGGTCAGAAACTTCCAACTGCTGCGAGCACACGGCTGCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS CAA 72 bp | GTAGAGTTTGGGGGCGCAGCCGTGTGCTCGCAGCAGTaGGAAGTTTCTGACCTCATTCTCCCGGTCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: VEFGGAAVCSQQ*EVSDLILPVHQ Trigger: CTGGTGGACCGGGAGAATGAGGTCAGAAACTTCCAACTGCTGCGAGCACACGGCTGCGCCCCCAAACTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS CAA 72 bp | GTTGGTGATGCCGTCTTTGAAGCGCTTGGTCCGAACTaGTTCGGGCTTCCAGTGCGGCCGCAGCTCCCGAAT | + |
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Preference number: 6 (lower is better) Translates to: VGDAVFEALGPN*FGLPVRPQLPN Trigger: ATTCGGGAGCTGCGGCCGCACTGGAAGCCCGAACAAGTTCGGACCAAGCGCTTCAAAGACGGCATCACCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135222.9 |
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| CDS CAA 90 bp | AAAGGTACAGTAGAGTTTGGGGGCGCAGCCGTGTGCTCGCAGCAGTaGGAAGTTTCTGACCTCATTCTCCCGGTCCACCAGCAACTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: KGTVEFGGAAVCSQQ*EVSDLILPVHQQLR Trigger: ACGGAGTTGCTGGTGGACCGGGAGAATGAGGTCAGAAACTTCCAACTGCTGCGAGCACACGGCTGCGCCCCCAAACTCTACTGTACCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 72 bp | GACTTGTGCATAAAGCCGCTCCACCTCCCTGGGGGATaGAGCTGTCCCCTTCTGCGCCTCAAGATAATAACG | + |
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Preference number: 6 (lower is better) Translates to: DLCIKPLHLPGG*SCPLLRLKIIT Trigger: CGTTATTATCTTGAGGCGCAGAAGGGGACAGCTGCATCCCCCAGGGAGGTGGAGCGGCTTTATGCACAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS TCA 72 bp | GTGCCCAGAAGAAATGAGATGCCAGAGCGAATTTGTTaGCTTGTGCATAAAGCCGCTCCACCTCCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VPRRNEMPERIC*LVHKAAPPPWG Trigger: CCCCCAGGGAGGTGGAGCGGCTTTATGCACAAGTCAACAAATTCGCTCTGGCATCTCATTTCTTCTGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 72 bp | CTGAAAGGTACAGTAGAGTTTGGGGGCGCAGCCGTGTaGTCGCAGCAGTTGGAAGTTTCTGACCTCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LKGTVEFGGAAV*SQQLEVSDLIL Trigger: GAGAATGAGGTCAGAAACTTCCAACTGCTGCGAGCACACGGCTGCGCCCCCAAACTCTACTGTACCTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS CCA 72 bp | ATAATAACGCAGCCACTGCACCTGGGTCTCCCGAGCTaGATACCGGCTGTAATCAACCACATTCACACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IITQPLHLGLPS*IPAVINHIHTC Trigger: GCAGGTGTGAATGTGGTTGATTACAGCCGGTATCCAGCTCGGGAGACCCAGGTGCAGTGGCTGCGTTATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 72 bp | GAAGAAATGAGATGCCAGAGCGAATTTGTTGACTTGTaGATAAAGCCGCTCCACCTCCCTGGGGGATGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EEMRCQSEFVDL*IKPLHLPGGCS Trigger: GCTGCATCCCCCAGGGAGGTGGAGCGGCTTTATGCACAAGTCAACAAATTCGCTCTGGCATCTCATTTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS CAA 72 bp | CCAGAAGAAATGAGATGCCAGAGCGAATTTGTTGACTaGTGCATAAAGCCGCTCCACCTCCCTGGGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PEEMRCQSEFVD*CIKPLHLPGGC Trigger: GCATCCCCCAGGGAGGTGGAGCGGCTTTATGCACAAGTCAACAAATTCGCTCTGGCATCTCATTTCTTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 72 bp | CTGTATGAGTGCCCAGAGTGCCCAGAAGAAATGAGATaGCAGAGCGAATTTGTTGACTTGTGCATAAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LYECPECPEEMR*QSEFVDLCIKP Trigger: CGGCTTTATGCACAAGTCAACAAATTCGCTCTGGCATCTCATTTCTTCTGGGCACTCTGGGCACTCATACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS GCA 72 bp | GATGGTAGAATACTGGTTCTGTATGAGTGCCCAGAGTaGCCAGAAGAAATGAGATGCCAGAGCGAATTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DGRILVLYECPE*PEEMRCQSEFV Trigger: AACAAATTCGCTCTGGCATCTCATTTCTTCTGGGCACTCTGGGCACTCATACAGAACCAGTATTCTACCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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| CDS TCA 72 bp | GGCTGTAATCAACCACATTCACACCTGCAAACTCATTaGAATGGTTGCCAATGTCAAATGCCTGGTAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GCNQPHSHLQTH*NGCQCQMPGSC Trigger: ACAACTACCAGGCATTTGACATTGGCAACCATTTCAATGAGTTTGCAGGTGTGAATGTGGTTGATTACAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129213.2 ENSMUST00000135222.9 |
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