RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETHE1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000064254

Ensembl transcript IDs: ENSMUST00000077191.7

Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGACGGGAGATGACAGACTaGCAGCCCGGGAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRREMTD*QPGSRD
Trigger: GTCCCTGCTCCCGGGCTGCCAGTCTGTCATCTCCCG...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR TCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAGAACCCCCGTGCCGGTaGTGTGGTCAGCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGREPPCR*CGQHGS
Trigger: ACTGCCATGCTGACCACATCACCGGCACGGGGGTTC...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAACACAGCCTGGAGTGTaGCCAGGGCTGGCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRTQPGV*PGLARV
Trigger: GACTCGAGCCAGCCCTGGCCACACTCCAGGCTGTGT...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR TCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGACAGAACTGCCTCTCTTaGCTCCCGGTCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRQNCLS*LPVTQK
Trigger: CTTCTGGGTGACCGGGAGTCAAGAGAGGCAGTTCTG...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR TCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGACGTTCAGGACAAAGGTaGCACAGCCTGGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRRSGQR*HSLECG
Trigger: GCCACACTCCAGGCTGTGTCACCTTTGTCCTGAACG...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR GCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGATTGGGTTCAAACATCTaGCGCAGGAGGACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRLGSNI*RRRTGA
Trigger: AGCCCCGGTCCTCCTGCGGCAGATGTTTGAACCCAA...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAGAGTGTGGCCAGGGCTaGCTCGAGTCTCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRECGQG*LESPKQ
Trigger: TTGCTTTGGAGACTCGAGCCAGCCCTGGCCACACTC...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAGCTGAGGGTAAGCCGTaGGTTCAGAGTCCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRAEGKP*VQSPFL
Trigger: GAGGAACGGACTCTGAACCCACGGCTTACCCTCAGC...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAGTGAAGGCCATGCTCTaGTCGTTCAGGACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRVKAML*SFRTKV
Trigger: CACCTTTGTCCTGAACGACCAGAGCATGGCCTTCAC...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGATTAGCACAGCCTTGTTaGAAGTCTGTCCGTCCACAC +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRLAQPC*KSVRPH
Trigger: GTGTGGACGGACAGACTTCCAACAAGGCTGTGCTAA...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGACTATCTGCTGTGGCTTaGGCAAGTTCAGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRLSAVA*ASSGCP
Trigger: TGGACAACCTGAACTTGCCCAAGCCACAGCAGATAG...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGATATAGGTGCAGCTCTTaGGTTCAAACATCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRYRCSS*VQTSAA
Trigger: TGCGGCAGATGTTTGAACCCAAGAGCTGCACCTATA...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR GCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAGTGAAGATCTTCTCGTaGACAGAGTGGTACAAAGTC +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRVKIFS*TEWYKV
Trigger: GACTTTGTACCACTCTGTGCACGAGAAGATCTTCAC...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR GCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGACCCACAGCGCATATTTaGAGGAACAGCAATGTCTAT +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRPTAHI*RNSNVY
Trigger: ATAGACATTGCTGTTCCTGCAAATATGCGCTGTGGG...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CCA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAAATGTCTATCTGCTGTaGCTTGGGCAAGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRNVYLL*LGQVQV
Trigger: AACCTGAACTTGCCCAAGCCACAGCAGATAGACATT...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS GCA 90 bp GGTTCAAACATCTGCCGCAGGAGGACCGGGGCTCCGGATGCGCTTTaGTGGCTCAGCCGCCGCCCGGCGACCCTGACGACCGCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: GSNICRRRTGAPDAL*WLSRRPATLTTALA
Trigger: GGCGAGCGCGGTCGTCAGGGTCGCCGGGCGGCGGCTGAGCCAGCAAAGCGCATCCGGAGCCCCGGTCCTCCTGCGGCAGATGTTTGAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS GCA 90 bp GCTCTTGGGTTCAAACATCTGCCGCAGGAGGACCGGGGCTCCGGATaGGCTTTGCTGGCTCAGCCGCCGCCCGGCGACCCTGACGACCGC +
Preference number: 5 (lower is better)
Translates to: ALGFKHLPQEDRGSG*ALLAQPPPGDPDDR
Trigger: GCGGTCGTCAGGGTCGCCGGGCGGCGGCTGAGCCAGCAAAGCGCATCCGGAGCCCCGGTCCTCCTGCGGCAGATGTTTGAACCCAAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 90 bp ATATGCAAATCAGCCTGGGCTCCGCTGAGGCGGGAGATGACAGACTaGCAGCCCGGGAGCAGGGACCGGAGAACCCCCGTGCCGGTGATG +
Preference number: 5 (lower is better)
Translates to: ICKSAWAPLRREMTD*QPGSRDRRTPVPVM
Trigger: CATCACCGGCACGGGGGTTCTCCGGTCCCTGCTCCCGGGCTGCCAGTCTGTCATCTCCCGCCTCAGCGGAGCCCAGGCTGATTTGCATAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAGGCTCCGGATGCGCTTaGCTGGCTCAGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRGSGCA*LAQPPP
Trigger: GGGCGGCGGCTGAGCCAGCAAAGCGCATCCGGAGCC...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS TCA 90 bp CAGACTGGCAGCCCGGGAGCAGGGACCGGAGAACCCCCGTGCCGGTaGTGTGGTCAGCATGGCAGTGAGTGTTCACAGCGTACAACAGCT +
Preference number: 5 (lower is better)
Translates to: QTGSPGAGTGEPPCR*CGQHGSECSQRTTA
Trigger: AGCTGTTGTACGCTGTGAACACTCACTGCCATGCTGACCACATCACCGGCACGGGGGTTCTCCGGTCCCTGCTCCCGGGCTGCCAGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 90 bp CGTCCAAAGCGGATGGAATCACCTTCCCCGATATGCAAATCAGCCTaGGCTCCGCTGAGGCGGGAGATGACAGACTGGCAGCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: RPKRMESPSPICKSA*APLRREMTDWQPGS
Trigger: GCTCCCGGGCTGCCAGTCTGTCATCTCCCGCCTCAGCGGAGCCCAGGCTGATTTGCATATCGGGGAAGGTGATTCCATCCGCTTTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 90 bp CTCTTGACTCCCGGTCACCCAGAAGGTAGGTATAGGTGCAGCTCTTaGGTTCAAACATCTGCCGCAGGAGGACCGGGGCTCCGGATGCGC +
Preference number: 5 (lower is better)
Translates to: LLTPGHPEGRYRCSS*VQTSAAGGPGLRMR
Trigger: GCGCATCCGGAGCCCCGGTCCTCCTGCGGCAGATGTTTGAACCCAAGAGCTGCACCTATACCTACCTTCTGGGTGACCGGGAGTCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 90 bp CCACACCCTCGGATCAGCAGGGCATCTCCAGTGAAGGCCATGCTCTaGTCGTTCAGGACAAAGGTGACACAGCCTGGAGTGTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PHPRISRASPVKAML*SFRTKVTQPGVWPG
Trigger: CCCTGGCCACACTCCAGGCTGTGTCACCTTTGTCCTGAACGACCAGAGCATGGCCTTCACTGGAGATGCCCTGCTGATCCGAGGGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 90 bp GCCATGCTCTGGTCGTTCAGGACAAAGGTGACACAGCCTGGAGTGTaGCCAGGGCTGGCTCGAGTCTCCAAAGCAAAGCGTCCAAAGCGG +
Preference number: 5 (lower is better)
Translates to: AMLWSFRTKVTQPGV*PGLARVSKAKRPKR
Trigger: CCGCTTTGGACGCTTTGCTTTGGAGACTCGAGCCAGCCCTGGCCACACTCCAGGCTGTGTCACCTTTGTCCTGAACGACCAGAGCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS TCA 90 bp CCGATGCGCTGTCTCCAGAACGGGGTCGATCAGAACTGCCTCTCTTaGCTCCCGGTCACCCAGAAGGTAGGTATAGGTGCAGCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: PMRCLQNGVDQNCLS*LPVTQKVGIGAALG
Trigger: CCCAAGAGCTGCACCTATACCTACCTTCTGGGTGACCGGGAGTCAAGAGAGGCAGTTCTGATCGACCCCGTTCTGGAGACAGCGCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGATCAGAACTGCCTCTCTaGACTCCCGGTCACCCAGAA +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRSELPL*TPGHPE
Trigger: TTCTGGGTGACCGGGAGTCAAGAGAGGCAGTTCTGA...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS GCA 90 bp TCCAAAGCAAAGCGTCCAAAGCGGATGGAATCACCTTCCCCGATATaGAAATCAGCCTGGGCTCCGCTGAGGCGGGAGATGACAGACTGG +
Preference number: 5 (lower is better)
Translates to: SKAKRPKRMESPSPI*KSAWAPLRREMTDW
Trigger: CCAGTCTGTCATCTCCCGCCTCAGCGGAGCCCAGGCTGATTTGCATATCGGGGAAGGTGATTCCATCCGCTTTGGACGCTTTGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAACAGCGTACAACAGCTaGAGCCCCAGCTCCTTAATC +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRTAYNS*SPSSLI
Trigger: GATTAAGGAGCTGGGGCTCAAGCTGTTGTACGCTGT...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGACTTAGCACAGCCTTGTaGGAAGTCTGTCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRLSTAL*EVCPST
Trigger: TGTGGACGGACAGACTTCCAACAAGGCTGTGCTAAG...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGATCTATCTGCTGTGGCTaGGGCAAGTTCAGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRSICCG*GKFRLS
Trigger: GGACAACCTGAACTTGCCCAAGCCACAGCAGATAGA...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGACCCCACAGCGCATATTaGCAGGAACAGCAATGTCTA +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRPHSAY*QEQQCL
Trigger: TAGACATTGCTGTTCCTGCAAATATGCGCTGTGGGG...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS TCA 90 bp GTGTTCACAGCGTACAACAGCTTGAGCCCCAGCTCCTTAATCAACTaGGCATCCCGATGCGCTGTCTCCAGAACGGGGTCGATCAGAACT +
Preference number: 5 (lower is better)
Translates to: VFTAYNSLSPSSLIN*ASRCAVSRTGSIRT
Trigger: AGTTCTGATCGACCCCGTTCTGGAGACAGCGCATCGGGATGCTCAGTTGATTAAGGAGCTGGGGCTCAAGCTGTTGTACGCTGTGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGAAGGTTGTCCATGACCTaGATAAATTCCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRRLSMT*INSSQL
Trigger: CAGCTGTGAGGAATTTATCAAGGTCATGGACAACCT...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 90 bp GTTGTCCATGACCTTGATAAATTCCTCACAGCTGAGGGTAAGCCGTaGGTTCAGAGTCCGTTCCTCCTCCACAGTAGAAACTGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: VVHDLDKFLTAEGKP*VQSPFLLHSRNCEP
Trigger: GGGCTCACAGTTTCTACTGTGGAGGAGGAACGGACTCTGAACCCACGGCTTACCCTCAGCTGTGAGGAATTTATCAAGGTCATGGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS-3UTR CAA 90 bp CCCCTCACCCCTCCTAGTGCATTCATAACGGATGTGAGCAGCTGGCTGGGACGATTGGGCAAGTTCAGGTaGTCCATGACCTTGATAAAT +
Preference number: 5 (lower is better)
Translates to: PLTPPSAFITDVSSWLGRLGKFR*SMTLIN
Trigger: ATTTATCAAGGTCATGGACAACCTGAACTTGCCCAA...TCGTCCCAGCCAGCTGCTCACATCCGTTATGAATGCACTAGGAGGGGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 90 bp ATTAGACAGTTGCCTGGAAGTGTGAAGATCTTCTCGTGCACAGAGTaGTACAAAGTCTTAGCACAGCCTTGTTGGAAGTCTGTCCGTCCA +
Preference number: 5 (lower is better)
Translates to: IRQLPGSVKIFSCTE*YKVLAQPCWKSVRP
Trigger: TGGACGGACAGACTTCCAACAAGGCTGTGCTAAGACTTTGTACCACTCTGTGCACGAGAAGATCTTCACACTTCCAGGCAACTGTCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp TGCCGCAGGAGGACCGGGGCTCCGGATGCGCTTTGCTaGCTCAGCCGCCGCCCGGCGACCCTGACGACCGCG +
Preference number: 6 (lower is better)
Translates to: CRRRTGAPDALC*LSRRPATLTTA
Trigger: CGCGGTCGTCAGGGTCGCCGGGCGGCGGCTGAGCCAGCAAAGCGCATCCGGAGCCCCGGTCCTCCTGCGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS GCA 72 bp ATCTGCCGCAGGAGGACCGGGGCTCCGGATGCGCTTTaGTGGCTCAGCCGCCGCCCGGCGACCCTGACGACC +
Preference number: 6 (lower is better)
Translates to: ICRRRTGAPDAL*WLSRRPATLTT
Trigger: GGTCGTCAGGGTCGCCGGGCGGCGGCTGAGCCAGCAAAGCGCATCCGGAGCCCCGGTCCTCCTGCGGCAGAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp TCAGCCTGGGCTCCGCTGAGGCGGGAGATGACAGACTaGCAGCCCGGGAGCAGGGACCGGAGAACCCCCGTG +
Preference number: 6 (lower is better)
Translates to: SAWAPLRREMTD*QPGSRDRRTPV
Trigger: CACGGGGGTTCTCCGGTCCCTGCTCCCGGGCTGCCAGTCTGTCATCTCCCGCCTCAGCGGAGCCCAGGCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS GCA 72 bp TTCAAACATCTGCCGCAGGAGGACCGGGGCTCCGGATaGGCTTTGCTGGCTCAGCCGCCGCCCGGCGACCCT +
Preference number: 6 (lower is better)
Translates to: FKHLPQEDRGSG*ALLAQPPPGDP
Trigger: AGGGTCGCCGGGCGGCGGCTGAGCCAGCAAAGCGCATCCGGAGCCCCGGTCCTCCTGCGGCAGATGTTTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp CCCGGTCACCCAGAAGGTAGGTATAGGTGCAGCTCTTaGGTTCAAACATCTGCCGCAGGAGGACCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: PGHPEGRYRCSS*VQTSAAGGPGL
Trigger: GAGCCCCGGTCCTCCTGCGGCAGATGTTTGAACCCAAGAGCTGCACCTATACCTACCTTCTGGGTGACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CAA 90 bp CCCGATGCGCTGTCTCCAGAACGGGGTCGATCAGAACTGCCTCTCTaGACTCCCGGTCACCCAGAAGGTAGGTATAGGTGCAGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: PDALSPERGRSELPL*TPGHPEGRYRCSSW
Trigger: CCAAGAGCTGCACCTATACCTACCTTCTGGGTGACCGGGAGTCAAGAGAGGCAGTTCTGATCGACCCCGTTCTGGAGACAGCGCATCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS TCA 72 bp GCGTACAACAGCTTGAGCCCCAGCTCCTTAATCAACTaGGCATCCCGATGCGCTGTCTCCAGAACGGGGTCG +
Preference number: 6 (lower is better)
Translates to: AYNSLSPSSLIN*ASRCAVSRTGS
Trigger: CGACCCCGTTCTGGAGACAGCGCATCGGGATGCTCAGTTGATTAAGGAGCTGGGGCTCAAGCTGTTGTACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS GCA 72 bp AAGCGTCCAAAGCGGATGGAATCACCTTCCCCGATATaGAAATCAGCCTGGGCTCCGCTGAGGCGGGAGATG +
Preference number: 6 (lower is better)
Translates to: KRPKRMESPSPI*KSAWAPLRREM
Trigger: CATCTCCCGCCTCAGCGGAGCCCAGGCTGATTTGCATATCGGGGAAGGTGATTCCATCCGCTTTGGACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp TGGTCGTTCAGGACAAAGGTGACACAGCCTGGAGTGTaGCCAGGGCTGGCTCGAGTCTCCAAAGCAAAGCGT +
Preference number: 6 (lower is better)
Translates to: WSFRTKVTQPGV*PGLARVSKAKR
Trigger: ACGCTTTGCTTTGGAGACTCGAGCCAGCCCTGGCCACACTCCAGGCTGTGTCACCTTTGTCCTGAACGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp CGGATCAGCAGGGCATCTCCAGTGAAGGCCATGCTCTaGTCGTTCAGGACAAAGGTGACACAGCCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: RISRASPVKAML*SFRTKVTQPGV
Trigger: CACTCCAGGCTGTGTCACCTTTGTCCTGAACGACCAGAGCATGGCCTTCACTGGAGATGCCCTGCTGATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CAA 72 bp CTGTCTCCAGAACGGGGTCGATCAGAACTGCCTCTCTaGACTCCCGGTCACCCAGAAGGTAGGTATAGGTGC +
Preference number: 6 (lower is better)
Translates to: LSPERGRSELPL*TPGHPEGRYRC
Trigger: GCACCTATACCTACCTTCTGGGTGACCGGGAGTCAAGAGAGGCAGTTCTGATCGACCCCGTTCTGGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp GACCTTGATAAATTCCTCACAGCTGAGGGTAAGCCGTaGGTTCAGAGTCCGTTCCTCCTCCACAGTAGAAAC +
Preference number: 6 (lower is better)
Translates to: DLDKFLTAEGKP*VQSPFLLHSRN
Trigger: GTTTCTACTGTGGAGGAGGAACGGACTCTGAACCCACGGCTTACCCTCAGCTGTGAGGAATTTATCAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CAA 90 bp GCAGGAACAGCAATGTCTATCTGCTGTGGCTTGGGCAAGTTCAGGTaGTCCATGACCTTGATAAATTCCTCACAGCTGAGGGTAAGCCGT +
Preference number: 6 (lower is better)
Translates to: AGTAMSICCGLGKFR*SMTLINSSQLRVSR
Trigger: ACGGCTTACCCTCAGCTGTGAGGAATTTATCAAGGTCATGGACAACCTGAACTTGCCCAAGCCACAGCAGATAGACATTGCTGTTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS TCA 72 bp CGTGAGCCGGGTAGATTAGACAGTTGCCTGGAAGTGTaGAGATCTTCTCGTGCACAGAGTGGTACAAAGTCT +
Preference number: 6 (lower is better)
Translates to: REPGRLDSCLEV*RSSRAQSGTKS
Trigger: AGACTTTGTACCACTCTGTGCACGAGAAGATCTTCACACTTCCAGGCAACTGTCTAATCTACCCGGCTCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp GCGCATATTTGCAGGAACAGCAATGTCTATCTGCTGTaGCTTGGGCAAGTTCAGGTTGTCCATGACCTTGAT +
Preference number: 6 (lower is better)
Translates to: AHICRNSNVYLL*LGQVQVVHDLD
Trigger: ATCAAGGTCATGGACAACCTGAACTTGCCCAAGCCACAGCAGATAGACATTGCTGTTCCTGCAAATATGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CCA 72 bp TTGCCTGGAAGTGTGAAGATCTTCTCGTGCACAGAGTaGTACAAAGTCTTAGCACAGCCTTGTTGGAAGTCT +
Preference number: 6 (lower is better)
Translates to: LPGSVKIFSCTE*YKVLAQPCWKS
Trigger: AGACTTCCAACAAGGCTGTGCTAAGACTTTGTACCACTCTGTGCACGAGAAGATCTTCACACTTCCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS GCA 72 bp ATTAGACAGTTGCCTGGAAGTGTGAAGATCTTCTCGTaGACAGAGTGGTACAAAGTCTTAGCACAGCCTTGT +
Preference number: 6 (lower is better)
Translates to: IRQLPGSVKIFS*TEWYKVLAQPC
Trigger: ACAAGGCTGTGCTAAGACTTTGTACCACTCTGTGCACGAGAAGATCTTCACACTTCCAGGCAACTGTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7
CDS CAA 72 bp ATATTTGCAGGAACAGCAATGTCTATCTGCTGTGGCTaGGGCAAGTTCAGGTTGTCCATGACCTTGATAAAT +
Preference number: 6 (lower is better)
Translates to: IFAGTAMSICCG*GKFRLSMTLIN
Trigger: ATTTATCAAGGTCATGGACAACCTGAACTTGCCCAAGCCACAGCAGATAGACATTGCTGTTCCTGCAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077191.7