Pregenerated sensors for ETFDH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027809Ensembl transcript IDs: ENSMUST00000029386.14, ENSMUST00000120992.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGGCTGGATGCTGGGATaGTGCTTCCACCTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAGWMLG*CFHLWN Trigger: GTTCCAGAGGTGGAAGCATCATCCCAGCATCCAGCC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCAGCTGCAGAGAGTCCTaGTGGGCCGGCACCAACTAT | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCASCRES*WAGTNY Trigger: ATAGTTGGTGCCGGCCCAGCAGGACTCTCTGCAGCT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTGCAGAGAGTCCTGCTaGGCCGGCACCAACTATGAC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCACRESC*AGTNYD Trigger: GTCATAGTTGGTGCCGGCCCAGCAGGACTCTCTGCA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGGCCGGCACCAACTATaGCCACATCTGCTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAGRHQL*PHLLLL Trigger: CAGAAGAAGCAGATGTGGTCATAGTTGGTGCCGGCC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGTGTGTGCTCCGATCTaGGCAGCTTTCTCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAVCAPI*AAFSTR Trigger: TCTGGTGGAGAAAGCTGCTCAGATCGGAGCACACAC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCATCAAGACAAGCCCCTaGGAGCGTGTGTGCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAIKTSP*ERVCSD Trigger: ATCGGAGCACACACGCTCTCAGGGGCTTGTCTTGAT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGACTCCAAGAGCCTCTaGCTGTTCTCCCATCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCADSKSL*LFSHPA Trigger: AGCTGGATGGGAGAACAGGCAGAGGCTCTTGGAGTC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCCTGGGAAGAGCTCTTTaGAGGCAGCTGGATCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCALGRAL*RQLDQD Trigger: GTCTTGATCCAGCTGCCTTCAAAGAGCTCTTCCCAG...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCCCTCTGCAAAGACTGTaGCTTTGGCATGCAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAPLQRL*LWHAVP Trigger: TGGAACTGCATGCCAAAGTCACAGTCTTTGCAGAGG...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGGCCAACCAACAGTGTaGTCTACTCTTCCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAGQPTV*STLPGF Trigger: GAAACCTGGAAGAGTAGATCACACTGTTGGTTGGCC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCAATCCTTGGCTGGTTTaGGCTGATCAGAGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCANPWLV*ADQSLS Trigger: GCTCAGACTCTGATCAGCTCAAACCAGCCAAGGATT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTCCATGGCAACCCTCTaGAAAGACTGTGACTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCASMATL*KDCDFG Trigger: GCCAAAGTCACAGTCTTTGCAGAGGGTTGCCATGGA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGCAGAGAGTCCTGCTaGGCCGGCACCAACTATGAC | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGCRESC*AGTNYD Trigger: GTCATAGTTGGTGCCGGCCCAGCAGGACTCTCTGCA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGGCCGGCACCAACTATaGCCACATCTGCTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGGRHQL*PHLLLL Trigger: CAGAAGAAGCAGATGTGGTCATAGTTGGTGCCGGCC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGTGTGTGCTCCGATCTaGGCAGCTTTCTCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGVCAPI*AAFSTR Trigger: TCTGGTGGAGAAAGCTGCTCAGATCGGAGCACACAC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCATCAAGACAAGCCCCTaGGAGCGTGTGTGCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGIKTSP*ERVCSD Trigger: ATCGGAGCACACACGCTCTCAGGGGCTTGTCTTGAT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTTGGCTGGTTTGAGCTaGTCAGAGTCTGAGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCALAGLS*SESEPL Trigger: TAAAGGCTCAGACTCTGATCAGCTCAAACCAGCCAA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCACTGTGACTTTGGCATaGAGTTCCAGTCCTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCATVTLA*SSSPLS Trigger: TGAGAGAGGACTGGAACTGCATGCCAAAGTCACAGT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTTTCTCCTTCCAGTCTaGGAAGAGCTCTTTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAFLLPV*EELFEG Trigger: GCCTTCAAAGAGCTCTTCCCAGACTGGAAGGAGAAA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCAGGAAAAGTGAGTTTTaGTATGGACTGCAAGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCARKSEF*YGLQAA Trigger: GGCGGCTTGCAGTCCATACCAAAACTCACTTTTCCT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTCTTGGGGACATTCATaGAACCAGGACTACAACCAA | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCASWGHS*NQDYNQ Trigger: TTGGTTGTAGTCCTGGTTTCATGAATGTCCCCAAGA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCAAATTCATAAACTCCTaGAGGGCAGAATCGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAKFINS*RAESLL Trigger: GAGCAGCGATTCTGCCCTGCAGGAGTTTATGAATTT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTGTACAATCCTTGGCTaGTTTGAGCTGATCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCACTILG*FELIRV Trigger: GACTCTGATCAGCTCAAACCAGCCAAGGATTGTACA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGTTTCGGATACTCAATaGGTGTACAATCCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAVSDTQ*VYNPWL Trigger: CAGCCAAGGATTGTACACCCATTGAGTATCCGAAAC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCCCTCTGCAAAGACTGTaGCTTTGGCATGCAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGPLQRL*LWHAVP Trigger: TGGAACTGCATGCCAAAGTCACAGTCTTTGCAGAGG...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGGCCAACCAACAGTGTaGTCTACTCTTCCAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGGQPTV*STLPGF Trigger: GAAACCTGGAAGAGTAGATCACACTGTTGGTTGGCC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGAGTCCTGTTGTCTTTaGCTGGAGATTTTCACTAGT | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAESCCL*LEIFTS Trigger: ACTAGTGAAAATCTCCAGTCAAAGACAACAGGACTC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCAGGCCCATCGTATATTaGCAGGTTTCTATTAACAGG | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCARPIVY*QVSINR Trigger: CCTGTTAATAGAAACCTGTCAATATACGATGGGCCT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCCAGTGCACACAGTTCTaGGCATTTATCTGTAATCGA | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAQCTQF*AFICNR Trigger: TCGATTACAGATAAATGCTCAGAACTGTGTGCACTG...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCCACATCTGCTTCTTCTaGAAACCTCTCCATATTCAC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAHICFF*KPLHIH Trigger: GTGAATATGGAGAGGTTTGCAGAAGAAGCAGATGTG...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029386.14 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGGCGTACGATGTAATTaGCATGATTGTTCATCGGAA | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAGVRCN*HDCSSE Trigger: TTCCGATGAACAATCATGGCAATTACATCGTACGCC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCACTTCCACTTTTCATTaGCGTGTGGGTACCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCATSTFH*RVGTFD Trigger: ATCAAAGGTACCCACACGGCAATGAAAAGTGGAAGT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTTGGCTAGGTGTCCATaGCAACCCTCTGCAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGLARCP*QPSAKT Trigger: AGTCTTTGCAGAGGGTTGCCATGGACACCTAGCCAA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCAGGTACAGCAGAGGTTaGAGAACATCTTGGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGRYSRG*RTSWST Trigger: TGTGCTCCAAGATGTTCTTCAACCTCTGCTGTACCT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029386.14 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCAGCCACCAGGAAAAGTaGGTTTTGGTATGGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGSHQEK*VLVWTA Trigger: TGCAGTCCATACCAAAACTCACTTTTCCTGGTGGCT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGGCTGGTCATGTTCATaGTTAGTACCACTCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGGWSCS*LVPLKA Trigger: GGCTTTGAGTGGTACTAATCATGAACATGACCAGCC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCAAATGTTGTCTTTGGTaGACCATCCTTTTGTATGCC | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAKCCLW*TILLYA Trigger: GGCATACAAAAGGATGGTGCACCAAAGACAACATTT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTTTCTCCTTCCAGTCTaGGAAGAGCTCTTTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGFLLPV*EELFEG Trigger: GCCTTCAAAGAGCTCTTCCCAGACTGGAAGGAGAAA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCAAGACCTGGAAGAATTaGCACAGGAATTCTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAKTWKN*HRNSVF Trigger: AAACACAGAATTCCTGTGCCAATTCTTCCAGGTCTT...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCAGGAAAAGTGAGTTTTaGTATGGACTGCAAGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGRKSEF*YGLQAA Trigger: GGCGGCTTGCAGTCCATACCAAAACTCACTTTTCCT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCCTTTTCATTGCCGTGTaGGTACCTTTGATCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGLFIAV*VPLILG Trigger: CCCCAAGATCAAAGGTACCCACACGGCAATGAAAAG...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTCTTGGGGACATTCATaGAACCAGGACTACAACCAA | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGSWGHS*NQDYNQ Trigger: TTGGTTGTAGTCCTGGTTTCATGAATGTCCCCAAGA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS-3UTR GCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCAAATTCATAAACTCCTaGAGGGCAGAATCGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGKFINS*RAESLL Trigger: GAGCAGCGATTCTGCCCTGCAGGAGTTTATGAATTT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGTTCATCGGAAGACCTaGAAGAATTGGCACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGVHRKT*KNWHRN Trigger: ATTCCTGTGCCAATTCTTCCAGGTCTTCCGATGAAC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTCTTATAAAGCTGCTTaGCTAGGTGTCCATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGSYKAA*LGVHGN Trigger: GTTGCCATGGACACCTAGCCAAGCAGCTTTATAAGA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTCATATTCAGTTACATaGAGTCCTGTTGTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCASYSVT*SPVVFD Trigger: GTCAAAGACAACAGGACTCCATGTAACTGAATATGA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGTTTCGGATACTCAATaGGTGTACAATCCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGVSDTQ*VYNPWL Trigger: CAGCCAAGGATTGTACACCCATTGAGTATCCGAAAC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGAGTCCTGTTGTCTTTaGCTGGAGATTTTCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGESCCL*LEIFTS Trigger: ACTAGTGAAAATCTCCAGTCAAAGACAACAGGACTC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCATAAGAGGTCAAAACTaGTCTGTCCATCAGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGIRGQN*SVHQVS Trigger: CGAAACCTGATGGACAGATCAGTTTTGACCTCTTAT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCAGGCCCATCGTATATTaGCAGGTTTCTATTAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGRPIVY*QVSINR Trigger: CCTGTTAATAGAAACCTGTCAATATACGATGGGCCT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR TCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCCAGTGCACACAGTTCTaGGCATTTATCTGTAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGQCTQF*AFICNR Trigger: TCGATTACAGATAAATGCTCAGAACTGTGTGCACTG...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR GCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCACTTCCACTTTTCATTaGCGTGTGGGTACCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGTSTFH*RVGTFD Trigger: ATCAAAGGTACCCACACGGCAATGAAAAGTGGAAGT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGTTTCTCTGTTAAAATaGCAAACCTGTCTTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAVSLLK*QTCLLL Trigger: TAACAGAAGACAGGTTTGCCATTTTAACAGAGAAAC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCAAGACCTGGAAGAATTaGCACAGGAATTCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGKTWKN*HRNSVF Trigger: AAACACAGAATTCCTGTGCCAATTCTTCCAGGTCTT...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR GCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTTCCATACCCAGGATTaGTTCAAATTGTCCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGFHTQD*FKLSSY Trigger: ATATGAGGACAATTTGAAGCAATCCTGGGTATGGAA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCCTCAAATGTTGTCTTTaGTGCACCATCCTTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGLKCCL*CTILLY Trigger: ATACAAAAGGATGGTGCACCAAAGACAACATTTGAG...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCCCTGTTGTCTTTGACTaGAGATTTTCACTAGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGPVVFD*RFSLVS Trigger: ACTAACTAGTGAAAATCTCCAGTCAAAGACAACAGG...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTCATATTCAGTTACATaGAGTCCTGTTGTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNIQEVSLAYIYSFMETGSYSVT*SPVVFD Trigger: GTCAAAGACAACAGGACTCCATGTAACTGAATATGA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS CCA 90 bp | GAGCGCTCGGGCTCCGTAGGCTATCCTCTTCCCGCCTTCCAGGGTTaGCTGGATGCTGGGATGATGCTTCCACCTCTGGAACTCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ERSGSVGYPLPAFQG*LDAGMMLPPLELSE Trigger: TTCCGAGAGTTCCAGAGGTGGAAGCATCATCCCAGCATCCAGCCAACCCTGGAAGGCGGGAAGAGGATAGCCTACGGAGCCCGAGCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS GCA 90 bp | TCCACCAGACACACACGGATGTCCTTCCCCTGTTCAGCAGCCAGCTaGTTTAGCCGAATAGCTGCAGAGAGTCCTGCTGGGCCGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: STRHTRMSFPCSAAS*FSRIAAESPAGPAP Trigger: TGGTGCCGGCCCAGCAGGACTCTCTGCAGCTATTCGGCTAAAGCAGCTGGCTGCTGAACAGGGGAAGGACATCCGTGTGTGTCTGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS TCA 90 bp | GCAGCTGGATCAAGACAAGCCCCTGAGAGCGTGTGTGCTCCGATCTaGGCAGCTTTCTCCACCAGACACACACGGATGTCCTTCCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGSRQAPESVCAPI*AAFSTRHTRMSFPC Trigger: ACAGGGGAAGGACATCCGTGTGTGTCTGGTGGAGAAAGCTGCTCAGATCGGAGCACACACGCTCTCAGGGGCTTGTCTTGATCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS GCA 90 bp | AGCTGCAGAGAGTCCTGCTGGGCCGGCACCAACTATGACCACATCTaGTTCTTCTGCAAACCTCTCCATATTCACTCCTTCCCATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCRESCWAGTNYDHI*FFCKPLHIHSFPSF Trigger: AAAAGATGGGAAGGAGTGAATATGGAGAGGTTTGCAGAAGAAGCAGATGTGGTCATAGTTGGTGCCGGCCCAGCAGGACTCTCTGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029386.14 |
||
| CDS GCA 90 bp | GCTAGGTGTCCATGGCAACCCTCTGCAAAGACTGTGACTTTGGCATaGAGTTCCAGTCCTCTCTCAAATGTTGTCTTTGGTGCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ARCPWQPSAKTVTLA*SSSPLSNVVFGAPS Trigger: GGATGGTGCACCAAAGACAACATTTGAGAGAGGACTGGAACTGCATGCCAAAGTCACAGTCTTTGCAGAGGGTTGCCATGGACACCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS GCA 90 bp | GAGTCCTGCTGGGCCGGCACCAACTATGACCACATCTGCTTCTTCTaGAAACCTCTCCATATTCACTCCTTCCCATCTTTTGTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESCWAGTNYDHICFF*KPLHIHSFPSFVFL Trigger: GAGAAAGACAAAAGATGGGAAGGAGTGAATATGGAGAGGTTTGCAGAAGAAGCAGATGTGGTCATAGTTGGTGCCGGCCCAGCAGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029386.14 |
||
| CDS TCA 90 bp | AAAGCTGCTTGGCTAGGTGTCCATGGCAACCCTCTGCAAAGACTGTaGCTTTGGCATGCAGTTCCAGTCCTCTCTCAAATGTTGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KAAWLGVHGNPLQRL*LWHAVPVLSQMLSL Trigger: CAAAGACAACATTTGAGAGAGGACTGGAACTGCATGCCAAAGTCACAGTCTTTGCAGAGGGTTGCCATGGACACCTAGCCAAGCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS GCA 90 bp | GTTCTCCCATCCAGCTCACCAGATGTCCTAGGCGTACGATGTAATTaGCATGATTGTTCATCGGAAGACCTGGAAGAATTGGCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLPSSSPDVLGVRCN*HDCSSEDLEELAQE Trigger: TTCCTGTGCCAATTCTTCCAGGTCTTCCGATGAACAATCATGGCAATTACATCGTACGCCTAGGACATCTGGTGAGCTGGATGGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTCCCGCCTTCCAGGGTaGGCTGGATGCTGGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLVWHTFTVLWKLAVRCASRLPG*AGCWDD Trigger: ATCATCCCAGCATCCAGCCAACCCTGGAAGGCGGGA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS CCA 90 bp | AGGCCCTCCTCCTCCTTCTGGGACCACCCAGTTAATATTTTGACTTaGGTCTTTGATATCACATGTTTTACAGTGCACACAGTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPSSSFWDHPVNILT*VFDITCFTVHTVLS Trigger: GCTCAGAACTGTGTGCACTGTAAAACATGTGATATCAAAGACCCAAGTCAAAATATTAACTGGGTGGTCCCAGAAGGAGGAGGAGGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS TCA 90 bp | CATCAGGTTTCGGATACTCAATGGGTGTACAATCCTTGGCTGGTTTaGGCTGATCAGAGTCTGAGCCTTTATGTTTTAGAGTCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQVSDTQWVYNPWLV*ADQSLSLYVLESMA Trigger: AGCCATGGACTCTAAAACATAAAGGCTCAGACTCTGATCAGCTCAAACCAGCCAAGGATTGTACACCCATTGAGTATCCGAAACCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCGAGGTACAGCAGAGGTaGAAGAACATCTTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAEVQQR*KNILEH Trigger: GTGCTCCAAGATGTTCTTCAACCTCTGCTGTACCTC...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029386.14 |
||
| CDS GCA 90 bp | GGCCTTATATTTCGAACAGCGTGTAGCTCTTTCCATACCCAGGATTaGTTCAAATTGTCCTCATATTCAGTTACATGGAGTCCTGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLIFRTACSSFHTQD*FKLSSYSVTWSPVV Trigger: GACAACAGGACTCCATGTAACTGAATATGAGGACAATTTGAAGCAATCCTGGGTATGGAAAGAGCTACACGCTGTTCGAAATATAAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS TCA 90 bp | ATGCTGTCATCCTTTAAGGTTAAATGTGCTGGCTGGTCATGTTCATaGTTAGTACCACTCAAAGCCACAGAGGATAAGAGGTCAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSSFKVKCAGWSCS*LVPLKATEDKRSKL Trigger: CAGTTTTGACCTCTTATCCTCTGTGGCTTTGAGTGGTACTAATCATGAACATGACCAGCCAGCACATTTAACCTTAAAGGATGACAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTGGGTACCTTTGATCTaGGGGACATTCATGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAWVPLI*GTFMKP Trigger: TGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGCAAAGACTGTGACTTaGGCATGCAGTTCCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LNIQEVSLAYIYSFMETGAKTVT*ACSSSP Trigger: AGGACTGGAACTGCATGCCAAAGTCACAGTCTTTGC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTCTCAAATGTTGTCTTaGGTGCACCATCCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KLVWHTFTVLWKLAVRCASQMLS*VHHPFV Trigger: TACAAAAGGATGGTGCACCAAAGACAACATTTGAGA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGTCAGGTGTGCCTTTCCATACCCAGGATaGCTTCAAATTGTCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KLVWHTFTVLWKLAVRCAFPYPG*LQIVLI Trigger: TATGAGGACAATTTGAAGCAATCCTGGGTATGGAAA...GGCACACCTGACAGCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCGAAGACCTGGAAGAATaGGCACAGGAATTCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LNIQEVSLAYIYSFMETGEDLEE*AQEFCV Trigger: AACACAGAATTCCTGTGCCAATTCTTCCAGGTCTTC...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTGGGTACCTTTGATCTaGGGGACATTCATGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LNIQEVSLAYIYSFMETGWVPLI*GTFMKP Trigger: TGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTCTCAAATGTTGTCTTaGGTGCACCATCCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LNIQEVSLAYIYSFMETGSQMLS*VHHPFV Trigger: TACAAAAGGATGGTGCACCAAAGACAACATTTGAGA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTTTCCATACCCAGGATaGCTTCAAATTGTCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LNIQEVSLAYIYSFMETGFPYPG*LQIVLI Trigger: TATGAGGACAATTTGAAGCAATCCTGGGTATGGAAA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCTCGAAATCCATCACCTaGTTCCAAAGGAACAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LNIQEVSLAYIYSFMETGSKSIT*FQRNKF Trigger: GAATTTGTTCCTTTGGAACAAGGTGATGGATTTCGA...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACATACAGGAAGTTAGTTTGGCATACATTTACAGTTTTATGGAAACTGGCCACCCAGTTAATATTTaGACTTGGGTCTTTGATATC | + |
|
Preference number: 5 (lower is better) Translates to: LNIQEVSLAYIYSFMETGHPVNI*TWVFDI Trigger: GATATCAAAGACCCAAGTCAAAATATTAACTGGGTG...GCCAGTTTCCATAAAACTGTAAATGTATGCCAAACTAACTTCCTGTATGTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS TCA 72 bp | CTCTTCCCGCCTTCCAGGGTTGGCTGGATGCTGGGATaGTGCTTCCACCTCTGGAACTCTCGGAATGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: LFPPSRVGWMLG*CFHLWNSRNGL Trigger: GAGTCCATTCCGAGAGTTCCAGAGGTGGAAGCATCATCCCAGCATCCAGCCAACCCTGGAAGGCGGGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS GCA 72 bp | CACACACGGATGTCCTTCCCCTGTTCAGCAGCCAGCTaGTTTAGCCGAATAGCTGCAGAGAGTCCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HTRMSFPCSAAS*FSRIAAESPAG Trigger: CCCAGCAGGACTCTCTGCAGCTATTCGGCTAAAGCAGCTGGCTGCTGAACAGGGGAAGGACATCCGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS GCA 72 bp | AGGCTATCCTCTTCCCGCCTTCCAGGGTTGGCTGGATaGTGGGATGATGCTTCCACCTCTGGAACTCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLSSSRLPGLAG*WDDASTSGTLG Trigger: TCCGAGAGTTCCAGAGGTGGAAGCATCATCCCAGCATCCAGCCAACCCTGGAAGGCGGGAAGAGGATAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS TCA 72 bp | TCAAGACAAGCCCCTGAGAGCGTGTGTGCTCCGATCTaGGCAGCTTTCTCCACCAGACACACACGGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRQAPESVCAPI*AAFSTRHTRMS Trigger: GGACATCCGTGTGTGTCTGGTGGAGAAAGCTGCTCAGATCGGAGCACACACGCTCTCAGGGGCTTGTCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
||
| CDS TCA 72 bp | GAGCCCCTTTCTCCTTCCAGTCTGGGAAGAGCTCTTTaGAGGCAGCTGGATCAAGACAAGCCCCTGAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: EPLSPSSLGRAL*RQLDQDKPLRA Trigger: CGCTCTCAGGGGCTTGTCTTGATCCAGCTGCCTTCAAAGAGCTCTTCCCAGACTGGAAGGAGAAAGGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CCA 72 bp | GCTGGGATGATGCTTCCACCTCTGGAACTCTCGGAATaGACTCAGGTACGGATTCTGATAGTCGAGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: AGMMLPPLELSE*TQVRILIVEAN Trigger: GTTGGCCTCGACTATCAGAATCCGTACCTGAGTCCATTCCGAGAGTTCCAGAGGTGGAAGCATCATCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS GCA 72 bp | GAGTCCTGCTGGGCCGGCACCAACTATGACCACATCTaGTTCTTCTGCAAACCTCTCCATATTCACTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ESCWAGTNYDHI*FFCKPLHIHSF Trigger: GAAGGAGTGAATATGGAGAGGTTTGCAGAAGAAGCAGATGTGGTCATAGTTGGTGCCGGCCCAGCAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029386.14 |
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| CDS CAA 90 bp | TGCTTGGCTAGGTGTCCATGGCAACCCTCTGCAAAGACTGTGACTTaGGCATGCAGTTCCAGTCCTCTCTCAAATGTTGTCTTTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CLARCPWQPSAKTVT*ACSSSPLSNVVFGA Trigger: TGCACCAAAGACAACATTTGAGAGAGGACTGGAACTGCATGCCAAAGTCACAGTCTTTGCAGAGGGTTGCCATGGACACCTAGCCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 72 bp | AGGTGTCCATGGCAACCCTCTGCAAAGACTGTGACTTaGGCATGCAGTTCCAGTCCTCTCTCAAATGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RCPWQPSAKTVT*ACSSSPLSNVV Trigger: GACAACATTTGAGAGAGGACTGGAACTGCATGCCAAAGTCACAGTCTTTGCAGAGGGTTGCCATGGACACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS GCA 72 bp | CCATGGCAACCCTCTGCAAAGACTGTGACTTTGGCATaGAGTTCCAGTCCTCTCTCAAATGTTGTCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: PWQPSAKTVTLA*SSSPLSNVVFG Trigger: ACCAAAGACAACATTTGAGAGAGGACTGGAACTGCATGCCAAAGTCACAGTCTTTGCAGAGGGTTGCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CCA 72 bp | AGCTGGCCCTCAGATCAAATTTCTTATAAAGCTGCTTaGCTAGGTGTCCATGGCAACCCTCTGCAAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: SWPSDQISYKAA*LGVHGNPLQRL Trigger: CAGTCTTTGCAGAGGGTTGCCATGGACACCTAGCCAAGCAGCTTTATAAGAAATTTGATCTGAGGGCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS TCA 72 bp | TGCAGGGCAGAATCGCTGCTCAGGCCCATCGTATATTaGCAGGTTTCTATTAACAGGTATGCTGTCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: CRAESLLRPIVY*QVSINRYAVIL Trigger: AAGGATGACAGCATACCTGTTAATAGAAACCTGTCAATATACGATGGGCCTGAGCAGCGATTCTGCCCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 90 bp | GCTGCCAAACTTCCACTTTTCATTGCCGTGTGGGTACCTTTGATCTaGGGGACATTCATGAAACCAGGACTACAACCAATTAGTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AAKLPLFIAVWVPLI*GTFMKPGLQPISKP Trigger: TGGCTTACTAATTGGTTGTAGTCCTGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCACACGGCAATGAAAAGTGGAAGTTTGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 90 bp | GTAAGCAGGCCCTCCTCCTCCTTCTGGGACCACCCAGTTAATATTTaGACTTGGGTCTTTGATATCACATGTTTTACAGTGCACACAGTT | + |
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Preference number: 6 (lower is better) Translates to: VSRPSSSFWDHPVNI*TWVFDITCFTVHTV Trigger: AACTGTGTGCACTGTAAAACATGTGATATCAAAGACCCAAGTCAAAATATTAACTGGGTGGTCCCAGAAGGAGGAGGAGGGCCTGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CCA 72 bp | GATTCTGCTGCCAAACTTCCACTTTTCATTGCCGTGTaGGTACCTTTGATCTTGGGGACATTCATGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: DSAAKLPLFIAV*VPLILGTFMKP Trigger: TGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCACACGGCAATGAAAAGTGGAAGTTTGGCAGCAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 72 bp | GCCAAACTTCCACTTTTCATTGCCGTGTGGGTACCTTaGATCTTGGGGACATTCATGAAACCAGGACTACAA | + |
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Preference number: 6 (lower is better) Translates to: AKLPLFIAVWVP*ILGTFMKPGLQ Trigger: TTGTAGTCCTGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCACACGGCAATGAAAAGTGGAAGTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 90 bp | GATTCTGCTGCCAAACTTCCACTTTTCATTGCCGTGTGGGTACCTTaGATCTTGGGGACATTCATGAAACCAGGACTACAACCAATTAGT | + |
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Preference number: 6 (lower is better) Translates to: DSAAKLPLFIAVWVP*ILGTFMKPGLQPIS Trigger: ACTAATTGGTTGTAGTCCTGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCACACGGCAATGAAAAGTGGAAGTTTGGCAGCAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS TCA 72 bp | TCGGATACTCAATGGGTGTACAATCCTTGGCTGGTTTaGGCTGATCAGAGTCTGAGCCTTTATGTTTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SDTQWVYNPWLV*ADQSLSLYVLE Trigger: CTCTAAAACATAAAGGCTCAGACTCTGATCAGCTCAAACCAGCCAAGGATTGTACACCCATTGAGTATCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CCA 72 bp | CCTTCAAACCAATTCCGTAAGTCTGTGCATCACAGCTaGCCCTCAGATCAAATTTCTTATAAAGCTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PSNQFRKSVHHS*PSDQISYKAAW Trigger: CCAAGCAGCTTTATAAGAAATTTGATCTGAGGGCCAGCTGTGATGCACAGACTTACGGAATTGGTTTGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 72 bp | CTTCCACTTTTCATTGCCGTGTGGGTACCTTTGATCTaGGGGACATTCATGAAACCAGGACTACAACCAATT | + |
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Preference number: 6 (lower is better) Translates to: LPLFIAVWVPLI*GTFMKPGLQPI Trigger: AATTGGTTGTAGTCCTGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCACACGGCAATGAAAAGTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 72 bp | GCGTGTAGCTCTTTCCATACCCAGGATTGCTTCAAATaGTCCTCATATTCAGTTACATGGAGTCCTGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: ACSSFHTQDCFK*SSYSVTWSPVV Trigger: GACAACAGGACTCCATGTAACTGAATATGAGGACAATTTGAAGCAATCCTGGGTATGGAAAGAGCTACACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 72 bp | CCCTCCTCCTCCTTCTGGGACCACCCAGTTAATATTTaGACTTGGGTCTTTGATATCACATGTTTTACAGTG | + |
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Preference number: 6 (lower is better) Translates to: PSSSFWDHPVNI*TWVFDITCFTV Trigger: CACTGTAAAACATGTGATATCAAAGACCCAAGTCAAAATATTAACTGGGTGGTCCCAGAAGGAGGAGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CAA 90 bp | TTTCGAACAGCGTGTAGCTCTTTCCATACCCAGGATTGCTTCAAATaGTCCTCATATTCAGTTACATGGAGTCCTGTTGTCTTTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: FRTACSSFHTQDCFK*SSYSVTWSPVVFDW Trigger: CCAGTCAAAGACAACAGGACTCCATGTAACTGAATATGAGGACAATTTGAAGCAATCCTGGGTATGGAAAGAGCTACACGCTGTTCGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS TCA 72 bp | TACTCAATGGGTGTACAATCCTTGGCTGGTTTGAGCTaGTCAGAGTCTGAGCCTTTATGTTTTAGAGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: YSMGVQSLAGLS*SESEPLCFRVH Trigger: ATGGACTCTAAAACATAAAGGCTCAGACTCTGATCAGCTCAAACCAGCCAAGGATTGTACACCCATTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS GCA 72 bp | TTTCGAACAGCGTGTAGCTCTTTCCATACCCAGGATTaGTTCAAATTGTCCTCATATTCAGTTACATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FRTACSSFHTQD*FKLSSYSVTWS Trigger: ACTCCATGTAACTGAATATGAGGACAATTTGAAGCAATCCTGGGTATGGAAAGAGCTACACGCTGTTCGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS CCA 72 bp | TCCTCCTTCTGGGACCACCCAGTTAATATTTTGACTTaGGTCTTTGATATCACATGTTTTACAGTGCACACA | + |
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Preference number: 6 (lower is better) Translates to: SSFWDHPVNILT*VFDITCFTVHT Trigger: TGTGTGCACTGTAAAACATGTGATATCAAAGACCCAAGTCAAAATATTAACTGGGTGGTCCCAGAAGGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS GCA 72 bp | CCTGTTGTCTTTGACTGGAGATTTTCACTAGTTAGTTaGTTAAAAATTGATTCTGCTGCCAAACTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: PVVFDWRFSLVS*LKIDSAAKLPL Trigger: AAGTGGAAGTTTGGCAGCAGAATCAATTTTTAAGCAACTAACTAGTGAAAATCTCCAGTCAAAGACAACAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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| CDS TCA 72 bp | TCTTTGATATCACATGTTTTACAGTGCACACAGTTCTaGGCATTTATCTGTAATCGAAATCCATCACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLISHVLQCTQF*AFICNRNPSPC Trigger: ACAAGGTGATGGATTTCGATTACAGATAAATGCTCAGAACTGTGTGCACTGTAAAACATGTGATATCAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029386.14 ENSMUST00000120992.8 |
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