Pregenerated sensors for ETFBKMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039958Ensembl transcript IDs: ENSMUST00000047531.16, ENSMUST00000111547.2, ENSMUST00000111548.8, ENSMUST00000111551.2, ENSMUST00000126406.8, ENSMUST00000134306.8, ENSMUST00000147934.4, ENSMUST00000166416.8, ENSMUST00000179873.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTaGCAAAGTCAAGTATGTGAGCACAAGAGACTATTTAAATGTTTT | + |
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Preference number: 1 (lower is better) Translates to: PRLKRPRHLSSSLWQ*QSQVCEHKRLFKCF Trigger: AAAACATTTAAATAGTCTCTTGTGCTCACATACTTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR TCA 90 bp | GCCTCCCAAGTGGTAGTATTCAAGGCCCAATCCACCACAAGCCACTaGATTGCATTCTTTAAACTGTTGAATACCTCCTACAGAGGATAT | + |
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Preference number: 1 (lower is better) Translates to: ASQVVVFKAQSTTSH*IAFFKLLNTSYRGY Trigger: ATATCCTCTGTAGGAGGTATTCAACAGTTTAAAGAATGCAATTCAGTGGCTTGTGGTGGATTGGGCCTTGAATACTACCACTTGGGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR TCA 90 bp | ATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTaGACTCACTATAGACCAAGCTGTCCTCAAAGTCACAGAGATGCG | + |
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Preference number: 1 (lower is better) Translates to: IYFWNRVLLYSSGCP*THYRPSCPQSHRDA Trigger: CGCATCTCTGTGACTTTGAGGACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR TCA 90 bp | AGACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAAGCCTCAGCCTCTAAGTaGCAGGATTACAGGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RLKRPRHLSSSLWQCQSQASASK*QDYRVL Trigger: CAGGACCCTGTAATCCTGTCACTTAGAGGCTGAGGC...TTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR CAA 90 bp | CATAGAGATGCCAAGAGGTGTGTCTTGAGGGTAACTCCAGATTCATaGGAGTTGACAGCAAAGGTTGCCCAGGGCAGGTGTGAAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: HRDAKRCVLRVTPDS*ELTAKVAQGRCEEN Trigger: GTTCTCTTCACACCTGCCCTGGGCAACCTTTGCTGTCAACTCCAATGAATCTGGAGTTACCCTCAAGACACACCTCTTGGCATCTCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCACTCTATCTCATAGAGATGCCAAGAGGTGTGTCTTGAGGGTAACTCCAGCCTCAGCCTCTAAGTaGCAGGATTACAGGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KSTLSHRDAKRCVLRVTPASASK*QDYRVL Trigger: CAGGACCCTGTAATCCTGTCACTTAGAGGCTGAGGC...TGGAGTTACCCTCAAGACACACCTCTTGGCATCTCTATGAGATAGAGTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR CAA 90 bp | GATGCCAAGAGGTGTGTCTTGAGGGTAACTCCAGATTCATTGGAGTaGACAGCAAAGGTTGCCCAGGGCAGGTGTGAAGAGAACTATTTT | + |
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Preference number: 2 (lower is better) Translates to: DAKRCVLRVTPDSLE*TAKVAQGRCEENYF Trigger: AAAATAGTTCTCTTCACACCTGCCCTGGGCAACCTTTGCTGTCAACTCCAATGAATCTGGAGTTACCCTCAAGACACACCTCTTGGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTATAGACCAAGCTGTCTCAAAGTCACAGAGATaGGCCTACTTCAGCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GSYYIALAVLELTIDQAVSKSQR*AYFSLP Trigger: TGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGA...GACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGTGTCTTGAGGGTAACTCCAGATTCATTGGAGTTGACAGCAAAGGTTGCCTGTCTTCCTCTCTGTaGCAGTGCCAAAGTCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: EVCLEGNSRFIGVDSKGCLSSSL*QCQSQV Trigger: TACTTGACTTTGGCACTGCCACAGAGAGGAAGACAG...GCAACCTTTGCTGTCAACTCCAATGAATCTGGAGTTACCCTCAAGACACACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGTCCACCACAAGCCACTaGATTGCATTCTTTAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: PQSHRDAPTSASQVVVFKSTTSH*IAFFKL Trigger: CAGTTTAAAGAATGCAATTCAGTGGCTTGTGGTGGA...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAAGTATCCATCTTTTTGGAGATaGCTTTGTTGTCCCACAAGA | + |
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Preference number: 2 (lower is better) Translates to: SRGLDICLPLCGSAKVKYPSFWR*LCCPTR Trigger: TCTTGTGGGACAACAAAGTCATCTCCAAAAAGATGG...ATACTTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR CAA 90 bp | CATAAGAAAAGCACTCTATCTCATAGAGATGCCAAGAGGTGTGTCTaGAGGGTAACTCCAGATTCATTGGAGTTGACAGCAAAGGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HKKSTLSHRDAKRCV*RVTPDSLELTAKVA Trigger: GGCAACCTTTGCTGTCAACTCCAATGAATCTGGAGTTACCCTCAAGACACACCTCTTGGCATCTCTATGAGATAGAGTGCTTTTCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTATAGACCAAGCTGTCCATTCTTTAAACTGTTaGATACCTCCTACAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSYYIALAVLELTIDQAVHSLNC*IPPTED Trigger: ATCCTCTGTAGGAGGTATTCAACAGTTTAAAGAATG...GACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTTCCACCACAAGCCACTaGATTGCATTCTTTAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: SIFGTGSYYIALAVLELTSTTSH*IAFFKL Trigger: CAGTTTAAAGAATGCAATTCAGTGGCTTGTGGTGGA...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGTGGCAGTGCCAAAGTCAAGTATGTGAGCACAAGAGACTATTTAAATGTCCATCTTTTTGGAGATaGCTTTGTTGTCCCACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLWQCQSQVCEHKRLFKCPSFWR*LCCPTR Trigger: TCTTGTGGGACAACAAAGTCATCTCCAAAAAGATGG...ACATTTAAATAGTCTCTTGTGCTCACATACTTGACTTTGGCACTGCCACAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR GCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCTCAAAGTCACAGAGATaGGCCTACTTCAGCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IIYLSIFGTGSYYIALAVSKSQR*AYFSLP Trigger: TGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGA...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTCATTCTTTAAACTGTTaGATACCTCCTACAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SIFGTGSYYIALAVLELTHSLNC*IPPTED Trigger: ATCCTCTGTAGGAGGTATTCAACAGTTTAAAGAATG...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR TCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCATTCTTTAAACTGTTaGATACCTCCTACAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: IIYLSIFGTGSYYIALAVHSLNC*IPPTED Trigger: ATCCTCTGTAGGAGGTATTCAACAGTTTAAAGAATG...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTGTGAAGAGAACTATTTTGTTACGAAGATATCCACATCTATGATTGTCATGTCATGGGTAACTATATaGCATCTTTTTGGAGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: RCEENYFVTKISTSMIVMSWVTI*HLFGDD Trigger: GTCATCTCCAAAAAGATGGCATATAGTTACCCATGA...CATGACAATCATAGATGTGGATATCTTCGTAACAAAATAGTTCTCTTCACACCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR CCA 72 bp | AGACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTaGCAGTGCCAAAGTCAAGTATGTGAGCACAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RLKRPRHLSSSL*QCQSQVCEHKR Trigger: TCTCTTGTGCTCACATACTTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR CAA 90 bp | CGAACTCCTAGGCTCATGCCTCAGCCTCTAAGTGACAGGATTACAGGGTCCTGCCTATATGCCATCTTTTaGGAGATGACTTTGTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: RTPRLMPQPLSDRITGSCLYAIF*EMTLLS Trigger: GGACAACAAAGTCATCTCCAAAAAGATGGCATATAG...GCAGGACCCTGTAATCCTGTCACTTAGAGGCTGAGGCATGAGCCTAGGAGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCTCATGCCTCAGCCTCTAAGTGACAGGATTACAGGGTCCTGCTATCATGGGTTTTTGGAGATGACTTaGTTGTCCCACAAGACAAAT | + |
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Preference number: 3 (lower is better) Translates to: RLMPQPLSDRITGSCYHGFLEMT*LSHKTN Trigger: ATTTGTCTTGTGGGACAACAAAGTCATCTCCAAAAA...CCCATGATAGCAGGACCCTGTAATCCTGTCACTTAGAGGCTGAGGCATGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGGCATTCTTTAAACTGTaGAATACCTCCTACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: PQSHRDAPTSASQVVVFKAFFKL*NTSYRG Trigger: TCCTCTGTAGGAGGTATTCAACAGTTTAAAGAATGC...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR CAA 90 bp | ACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAAGTTTTTTGGAGATGACTTaGTTGTCCCACAAGACAAAT | + |
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Preference number: 3 (lower is better) Translates to: TQEASTSVFLSVAVPKSSFLEMT*LSHKTN Trigger: ATTTGTCTTGTGGGACAACAAAGTCATCTCCAAAAA...ACTTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR TCA 72 bp | TGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTaGACTCACTATAGACCAAGCTGTCCTCAAAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: WNRVLLYSSGCP*THYRPSCPQSH Trigger: GTGACTTTGAGGACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR TCA 72 bp | ATTGGAGTTGACAGCAAAGGTTGCCCAGGGCAGGTGTaGAGAGAACTATTTTGTTACGAAGATATCCACATC | + |
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Preference number: 3 (lower is better) Translates to: IGVDSKGCPGQV*RELFCYEDIHI Trigger: GATGTGGATATCTTCGTAACAAAATAGTTCTCTTCACACCTGCCCTGGGCAACCTTTGCTGTCAACTCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR TCA 72 bp | GTGGTAGTATTCAAGGCCCAATCCACCACAAGCCACTaGATTGCATTCTTTAAACTGTTGAATACCTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: VVVFKAQSTTSH*IAFFKLLNTSY Trigger: GTAGGAGGTATTCAACAGTTTAAAGAATGCAATTCAGTGGCTTGTGGTGGATTGGGCCTTGAATACTACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR-3UTR CAA 90 bp | AAAAGCACTCTATCTCATAGAGATGCCAAGAGGTGTGTCTTGAGGGTAACTCCACTATATGCCATCTTTTaGGAGATGACTTTGTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: KSTLSHRDAKRCVLRVTPLYAIF*EMTLLS Trigger: GGACAACAAAGTCATCTCCAAAAAGATGGCATATAG...TGGAGTTACCCTCAAGACACACCTCTTGGCATCTCTATGAGATAGAGTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR CAA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTGCATTCTTTAAACTGTaGAATACCTCCTACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SIFGTGSYYIALAVLELTAFFKL*NTSYRG Trigger: TCCTCTGTAGGAGGTATTCAACAGTTTAAAGAATGC...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| 3UTR TCA 72 bp | GCTATCATGGGTAACTATATGCCATCTTTTTGGAGATaGCTTTGTTGTCCCACAAGACAAATCCTCTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: AIMGNYMPSFWR*LCCPTRQILFY Trigger: GTAGAAGAGGATTTGTCTTGTGGGACAACAAAGTCATCTCCAAAAAGATGGCATATAGTTACCCATGATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| 3UTR-3UTR CAA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCGCATTCTTTAAACTGTaGAATACCTCCTACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: IIYLSIFGTGSYYIALAVAFFKL*NTSYRG Trigger: TCCTCTGTAGGAGGTATTCAACAGTTTAAAGAATGC...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR CCA 90 bp | CGAACTCCTAGGCTCATGCCTCAGCCTCTAAGTGACAGGATTACAGGGTCCTGCCTGCAGGAAACTCCATaGGCTCCTGGGAGCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RTPRLMPQPLSDRITGSCLQETP*APGSFP Trigger: TGGAAAGCTCCCAGGAGCCCATGGAGTTTCCTGCAG...GCAGGACCCTGTAATCCTGTCACTTAGAGGCTGAGGCATGAGCCTAGGAGTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCATGCCTCAGCCTCTAAGTGACAGGATTACAGGGTCCTGCTATCATGGGCAGAGCCTGGCCTCCTaGCCAGTAAATAGCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: RLMPQPLSDRITGSCYHGQSLAS*PVNSPV Trigger: TACTGGGCTATTTACTGGCCAGGAGGCCAGGCTCTG...CCCATGATAGCAGGACCCTGTAATCCTGTCACTTAGAGGCTGAGGCATGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | ACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAAGTCTGCAGGAAACTCCATaGGCTCCTGGGAGCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQEASTSVFLSVAVPKSSLQETP*APGSFP Trigger: TGGAAAGCTCCCAGGAGCCCATGGAGTTTCCTGCAG...ACTTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | AGACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAACAGAGCCTGGCCTCCTaGCCAGTAAATAGCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: RLKRPRHLSSSLWQCQSQQSLAS*PVNSPV Trigger: TACTGGGCTATTTACTGGCCAGGAGGCCAGGCTCTG...TTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGCTATGTCCACTGAACTaGGGCCTCCCAGGGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: PQSHRDAPTSASQVVVFKLCPLN*GLPGSP Trigger: TGGTGACCCTGGGAGGCCCCAGTTCAGTGGACATAG...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR CCA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGCAGAGCCTGGCCTCCTaGCCAGTAAATAGCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: PQSHRDAPTSASQVVVFKQSLAS*PVNSPV Trigger: TACTGGGCTATTTACTGGCCAGGAGGCCAGGCTCTG...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
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| CDS-3UTR CCA 90 bp | ACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAAGTGCCTCAGCGGCTTTCTaGTTCTGCTGCTATGATATG | + |
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Preference number: 4 (lower is better) Translates to: TQEASTSVFLSVAVPKSSASAAF*FCCYDM Trigger: CATATCATAGCAGCAGAACCAGAAAGCCGCTGAGGC...ACTTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR TCA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGGTTGGCCAAGATCTTTaGTGCTCCACTCATCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PQSHRDAPTSASQVVVFKVGQDL*CSTHLG Trigger: GCCAAGATGAGTGGAGCATCAAAGATCTTGGCCAAC...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
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| CDS-3UTR TCA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGTTCTGCAGCCACAGATaGAGACTGTCTGCAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PQSHRDAPTSASQVVVFKFCSHR*RLSARS Trigger: AGACCTTGCAGACAGTCTTCATCTGTGGCTGCAGAA...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR GCA 90 bp | AGACTCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAAATAAAAGTTGGGACTTaGATGGGCCTCAGCGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RLKRPRHLSSSLWQCQSQIKVGT*MGLSGF Trigger: AAAGCCGCTGAGGCCCATGCAAGTCCCAACTTTTAT...TTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | GGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTATAGACCAAGCTGTCCTGCAGGAAACTCCATaGGCTCCTGGGAGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSYYIALAVLELTIDQAVLQETP*APGSFP Trigger: TGGAAAGCTCCCAGGAGCCCATGGAGTTTCCTGCAG...GACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCATGCCTCAGCCTCTAAGTGACAGGATTACAGGGTCCTGCTATCATGGGAAATGGAGGTGGGGATaGGTGCATAAAGGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RLMPQPLSDRITGSCYHGKWRWG*VHKGRI Trigger: AATCCTTCCTTTATGCACCCATCCCCACCTCCATTT...CCCATGATAGCAGGACCCTGTAATCCTGTCACTTAGAGGCTGAGGCATGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| 3UTR CAA 72 bp | GTGACCAGTTCTGGATGTAGTGCAGCCCTCTCTGTTTaGTTGACAATCCCTGTCTTCTCACTTAGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSSGCSAALSV*LTIPVFSLSLS Trigger: GCTGAGACTAAGTGAGAAGACAGGGATTGTCAACAAAACAGAGAGGGCTGCACTACATCCAGAACTGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR TCA 90 bp | GGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTATAGACCAAGCTGTCTTCTGCAGCCACAGATaGAGACTGTCTGCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSYYIALAVLELTIDQAVFCSHR*RLSARS Trigger: AGACCTTGCAGACAGTCTTCATCTGTGGCTGCAGAA...GACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR GCA 90 bp | GAGGTGTGTCTTGAGGGTAACTCCAGATTCATTGGAGTTGACAGCAAAGGTTGCATAAAAGTTGGGACTTaGATGGGCCTCAGCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVCLEGNSRFIGVDSKGCIKVGT*MGLSGF Trigger: AAAGCCGCTGAGGCCCATGCAAGTCCCAACTTTTAT...GCAACCTTTGCTGTCAACTCCAATGAATCTGGAGTTACCCTCAAGACACACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTCTATGTCCACTGAACTaGGGCCTCCCAGGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFGTGSYYIALAVLELTLCPLN*GLPGSP Trigger: TGGTGACCCTGGGAGGCCCCAGTTCAGTGGACATAG...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGGCCTCGACATCTGTCTTCCTCTCTGTGGCAGTGCCAAAGTCAAGTATAGAATGAAATGGAGGTaGGGATGGGTGCATAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGLDICLPLCGSAKVKYRMKWR*GWVHKG Trigger: TCCTTTATGCACCCATCCCCACCTCCATTTCATTCT...ATACTTGACTTTGGCACTGCCACAGAGAGGAAGACAGATGTCGAGGCCTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTATAGACCAAGCTGTCTGGGGTCTATGTCGTTaGCCAAGATCTTTGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSYYIALAVLELTIDQAVWGLCR*PRSLML Trigger: GAGCATCAAAGATCTTGGCCAACGACATAGACCCCA...GACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGTTCTGGATGTAGTGCAGCCCTCTCTGTTTTGTTGACAATCCCTGTCTTCAAATGGAGGTGGGGATaGGTGCATAAAGGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TSSGCSAALSVLLTIPVFKWRWG*VHKGRI Trigger: AATCCTTCCTTTATGCACCCATCCCCACCTCCATTT...GAAGACAGGGATTGTCAACAAAACAGAGAGGGCTGCACTACATCCAGAACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGTTCTGGATGTAGTGCAGCCCTCTCTGTTTTGTTGACAATCCCTGTCTTCAGAATGAAATGGAGGTaGGGATGGGTGCATAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSGCSAALSVLLTIPVFRMKWR*GWVHKG Trigger: TCCTTTATGCACCCATCCCCACCTCCATTTCATTCT...GAAGACAGGGATTGTCAACAAAACAGAGAGGGCTGCACTACATCCAGAACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGTTCTGGATGTAGTGCAGCCCTCTCTGTTTTGTTGACAATCCCTGTCTTCAAACCATATAAAAGTTaGGACTTGCATGGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSGCSAALSVLLTIPVFKPYKS*DLHGPQ Trigger: CTGAGGCCCATGCAAGTCCCAACTTTTATATGGTTT...GAAGACAGGGATTGTCAACAAAACAGAGAGGGCTGCACTACATCCAGAACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| 3UTR CAA 72 bp | AGCACTCTATCTCATAGAGATGCCAAGAGGTGTGTCTaGAGGGTAACTCCAGATTCATTGGAGTTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STLSHRDAKRCV*RVTPDSLELTA Trigger: TGCTGTCAACTCCAATGAATCTGGAGTTACCCTCAAGACACACCTCTTGGCATCTCTATGAGATAGAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTTTCTGCAGCCACAGATaGAGACTGTCTGCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIFGTGSYYIALAVLELTFCSHR*RLSARS Trigger: AGACCTTGCAGACAGTCTTCATCTGTGGCTGCAGAA...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTGTGGCAGTGCCAAAGTCAAGTATGTGAGCACAAGAGACTATTTAAATGTGGAGGTGGGGATGGGTaGATAAAGGAAGGATTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLWQCQSQVCEHKRLFKCGGGDG*IKEGFS Trigger: CGAAAATCCTTCCTTTATGCACCCATCCCCACCTCC...ACATTTAAATAGTCTCTTGTGCTCACATACTTGACTTTGGCACTGCCACAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTATGTCCACTGAACTaGGGCCTCCCAGGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IIYLSIFGTGSYYIALAVLCPLN*GLPGSP Trigger: TGGTGACCCTGGGAGGCCCCAGTTCAGTGGACATAG...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTATCATGGGTAACTATATGCCATCTTTTTGGAGATGACTTTGTTGTCCCAGCCTCAGCGGCTTTCTaGTTCTGCTGCTATGATATG | + |
|
Preference number: 4 (lower is better) Translates to: LLSWVTICHLFGDDFVVPASAAF*FCCYDM Trigger: CATATCATAGCAGCAGAACCAGAAAGCCGCTGAGGC...TGGGACAACAAAGTCATCTCCAAAAAGATGGCATATAGTTACCCATGATAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTGCAGGAAACTCCATaGGCTCCTGGGAGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIYLSIFGTGSYYIALAVLQETP*APGSFP Trigger: TGGAAAGCTCCCAGGAGCCCATGGAGTTTCCTGCAG...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
||
| CDS-3UTR CCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCAGAGCCTGGCCTCCTaGCCAGTAAATAGCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IIYLSIFGTGSYYIALAVQSLAS*PVNSPV Trigger: TACTGGGCTATTTACTGGCCAGGAGGCCAGGCTCTG...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
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| CDS-3UTR CCA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTTGGGGTCTATGTCGTTaGCCAAGATCTTTGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIFGTGSYYIALAVLELTWGLCR*PRSLML Trigger: GAGCATCAAAGATCTTGGCCAACGACATAGACCCCA...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTATAGACCAAGCTGTCCAGATGAAGACTGTCTaGAAGGTCTTCATCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSYYIALAVLELTIDQAVQMKTV*KVFIIK Trigger: TTTTATGATGAAGACCTTGCAGACAGTCTTCATCTG...GACAGCTTGGTCTATAGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR TCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCGTTGGCCAAGATCTTTaGTGCTCCACTCATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIYLSIFGTGSYYIALAVVGQDL*CSTHLG Trigger: GCCAAGATGAGTGGAGCATCAAAGATCTTGGCCAAC...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
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| CDS-3UTR GCA 90 bp | AGGTGTGAAGAGAACTATTTTGTTACGAAGATATCCACATCTATGATTGTCATGGGAGGTGGGGATGGGTaGATAAAGGAAGGATTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCEENYFVTKISTSMIVMGGGDG*IKEGFS Trigger: CGAAAATCCTTCCTTTATGCACCCATCCCCACCTCC...CATGACAATCATAGATGTGGATATCTTCGTAACAAAATAGTTCTCTTCACACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR GCA 90 bp | AGAGAACTATTTTGTTACGAAGATATCCACATCTATGATTGTCATGAAGCCAAGGCTTTCTGGTTCTGCTaGTATGATATGGGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RELFCYEDIHIYDCHEAKAFWFC*YDMGPE Trigger: CTCTGGCCCCATATCATAGCAGCAGAACCAGAAAGC...CTTGGCTTCATGACAATCATAGATGTGGATATCTTCGTAACAAAATAGTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCTGGGGTCTATGTCGTTaGCCAAGATCTTTGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IIYLSIFGTGSYYIALAVWGLCR*PRSLML Trigger: GAGCATCAAAGATCTTGGCCAACGACATAGACCCCA...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR GCA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTCAGATGAAGACTGTCTaGAAGGTCTTCATCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFGTGSYYIALAVLELTQMKTV*KVFIIK Trigger: TTTTATGATGAAGACCTTGCAGACAGTCTTCATCTG...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR CCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCGTTAAAAGCCGTAACTaGATTTCCGGGGTAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IIYLSIFGTGSYYIALAVVKSRN*ISGVRL Trigger: TAGCCTTACCCCGGAAATCCAGTTACGGCTTTTAAC...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
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| CDS-3UTR CCA 90 bp | AGAGAACTATTTTGTTACGAAGATATCCACATCTATGATTGTCATGAAGCCAAGAAACCATATAAAAGTTaGGACTTGCATGGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RELFCYEDIHIYDCHEAKKPYKS*DLHGPQ Trigger: CTGAGGCCCATGCAAGTCCCAACTTTTATATGGTTT...CTTGGCTTCATGACAATCATAGATGTGGATATCTTCGTAACAAAATAGTTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR GCA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCAGATGAAGACTGTCTaGAAGGTCTTCATCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IIYLSIFGTGSYYIALAVQMKTV*KVFIIK Trigger: TTTTATGATGAAGACCTTGCAGACAGTCTTCATCTG...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS TCA 90 bp | AATCGCCATTCCTGCAATGGGGTCTATGTCGTTGGCCAAGATCTTTaGTGCTCCACTCATCTTGGCAGCAATGGCTGTAGCTCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: NRHSCNGVYVVGQDL*CSTHLGSNGCSSTS Trigger: GGATGTGGAGCTACAGCCATTGCTGCCAAGATGAGTGGAGCATCAAAGATCTTGGCCAACGACATAGACCCCATTGCAGGAATGGCGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
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| CDS TCA 90 bp | TGTATTCTACTAGTTGGTACAGTTGATGCCGAATGCTATGTCCACTaGACTGGGGCCTCCCAGGGTCACCAATCAGTACTCGGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CILLVGTVDAECYVH*TGASQGHQSVLGFH Trigger: ATGGAACCCGAGTACTGATTGGTGACCCTGGGAGGCCCCAGTTCAGTGGACATAGCATTCGGCATCAACTGTACCAACTAGTAGAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS-3UTR CAA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGCGTTGGCCAAGATCTTaGATGCTCCACTCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQSHRDAPTSASQVVVFKRWPRS*MLHSSW Trigger: CCAAGATGAGTGGAGCATCAAAGATCTTGGCCAACG...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
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| CDS TCA 90 bp | GGAGGTGGGGATGGGTGCATAAAGGAAGGATTTTCGATATTTCAATaGAACATACCTAGACAGAGCCTGGCCTCCTGGCCAGTAAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGDGCIKEGFSIFQ*NIPRQSLASWPVNS Trigger: GCTATTTACTGGCCAGGAGGCCAGGCTCTGTCTAGGTATGTTTCATTGAAATATCGAAAATCCTTCCTTTATGCACCCATCCCCACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS-3UTR CAA 90 bp | CCTCAAAGTCACAGAGATGCGCCTACTTCAGCCTCCCAAGTGGTAGTATTCAAGTGTTCTCTTGCTGAGTaGGCTCTGGAAGTGTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: PQSHRDAPTSASQVVVFKCSLAE*ALEVCI Trigger: AATACACACTTCCAGAGCCAACTCAGCAAGAGAACA...CTTGAATACTACCACTTGGGAGGCTGAAGTAGGCGCATCTCTGTGACTTTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS-3UTR CAA 90 bp | TCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCTTGAACTCACTATGGGGTCTATGTCGTaGGCCAAGATCTTTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIFGTGSYYIALAVLELTMGSMS*AKIFDA Trigger: AGCATCAAAGATCTTGGCCAACGACATAGACCCCAT...AGTGAGTTCAAGGACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS-3UTR CAA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCCGTTGGCCAAGATCTTaGATGCTCCACTCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IIYLSIFGTGSYYIALAVRWPRS*MLHSSW Trigger: CCAAGATGAGTGGAGCATCAAAGATCTTGGCCAACG...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000179873.8 |
||
| CDS-3UTR CAA 90 bp | ATTATCTATCTATCTATTTTTGGAACAGGGTCTTACTATATAGCTCTGGCTGTCATGGGGTCTATGTCGTaGGCCAAGATCTTTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: IIYLSIFGTGSYYIALAVMGSMS*AKIFDA Trigger: AGCATCAAAGATCTTGGCCAACGACATAGACCCCAT...GACAGCCAGAGCTATATAGTAAGACCCTGTTCCAAAAATAGATAGATAGATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS CAA 72 bp | CTCCCCACTGTCCTCCAGAGAAACAGGGGAGACCCATaGTTCACAGCCTGCAGGAAACTCCATGGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPTVLQRNRGDP*FTACRKLHGLL Trigger: CAGGAGCCCATGGAGTTTCCTGCAGGCTGTGAACAATGGGTCTCCCCTGTTTCTCTGGAGGACAGTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000047531.16 ENSMUST00000111547.2 ENSMUST00000111548.8 ENSMUST00000111551.2 ENSMUST00000126406.8 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
||
| CDS CCA 72 bp | GGGAGACCCATTGTTCACAGCCTGCAGGAAACTCCATaGGCTCCTGGGAGCTTTCCAACACAGGCTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRPIVHSLQETP*APGSFPTQAES Trigger: GCTTTCAGCCTGTGTTGGAAAGCTCCCAGGAGCCCATGGAGTTTCCTGCAGGCTGTGAACAATGGGTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000047531.16 ENSMUST00000111547.2 ENSMUST00000111548.8 ENSMUST00000111551.2 ENSMUST00000126406.8 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
||
| CDS GCA 72 bp | CTCCAGAGAAACAGGGGAGACCCATTGTTCACAGCCTaGAGGAAACTCCATGGGCTCCTGGGAGCTTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQRNRGDPLFTA*RKLHGLLGAFQ Trigger: TTGGAAAGCTCCCAGGAGCCCATGGAGTTTCCTGCAGGCTGTGAACAATGGGTCTCCCCTGTTTCTCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000047531.16 ENSMUST00000111547.2 ENSMUST00000111548.8 ENSMUST00000111551.2 ENSMUST00000126406.8 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
||
| CDS GCA 72 bp | GGACTTGCATGGGCCTCAGCGGCTTTCTGGTTCTGCTaGTATGATATGGGGCCAGAGAGAATGAAATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLAWASAAFWFC*YDMGPERMKWR Trigger: CCTCCATTTCATTCTCTCTGGCCCCATATCATAGCAGCAGAACCAGAAAGCCGCTGAGGCCCATGCAAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
||
| CDS TCA 72 bp | CTAGTTGGTACAGTTGATGCCGAATGCTATGTCCACTaGACTGGGGCCTCCCAGGGTCACCAATCAGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: LVGTVDAECYVH*TGASQGHQSVL Trigger: GAGTACTGATTGGTGACCCTGGGAGGCCCCAGTTCAGTGGACATAGCATTCGGCATCAACTGTACCAACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
||
| CDS TCA 72 bp | TCCTGCAATGGGGTCTATGTCGTTGGCCAAGATCTTTaGTGCTCCACTCATCTTGGCAGCAATGGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SCNGVYVVGQDL*CSTHLGSNGCS Trigger: GCTACAGCCATTGCTGCCAAGATGAGTGGAGCATCAAAGATCTTGGCCAACGACATAGACCCCATTGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
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| CDS CAA 72 bp | ATGTCGTTGGCCAAGATCTTTGATGCTCCACTCATCTaGGCAGCAATGGCTGTAGCTCCACATCCACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: MSLAKIFDAPLI*AAMAVAPHPLP Trigger: TGGGAGTGGATGTGGAGCTACAGCCATTGCTGCCAAGATGAGTGGAGCATCAAAGATCTTGGCCAACGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
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| CDS CAA 90 bp | ATGGGGTCTATGTCGTTGGCCAAGATCTTTGATGCTCCACTCATCTaGGCAGCAATGGCTGTAGCTCCACATCCACTCCCAAGATCTAAG | + |
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Preference number: 6 (lower is better) Translates to: MGSMSLAKIFDAPLI*AAMAVAPHPLPRSK Trigger: CTTAGATCTTGGGAGTGGATGTGGAGCTACAGCCATTGCTGCCAAGATGAGTGGAGCATCAAAGATCTTGGCCAACGACATAGACCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
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| CDS TCA 72 bp | GGCTCTGGAAGTGTGTATTCTACTAGTTGGTACAGTTaGTGCCGAATGCTATGTCCACTGAACTGGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GSGSVYSTSWYS*CRMLCPLNWGL Trigger: GAGGCCCCAGTTCAGTGGACATAGCATTCGGCATCAACTGTACCAACTAGTAGAATACACACTTCCAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS CAA 72 bp | AGTGTAATCGCCATTCCTGCAATGGGGTCTATGTCGTaGGCCAAGATCTTTGATGCTCCACTCATCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SVIAIPAMGSMS*AKIFDAPLILA Trigger: TGCCAAGATGAGTGGAGCATCAAAGATCTTGGCCAACGACATAGACCCCATTGCAGGAATGGCGATTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000134306.8 ENSMUST00000166416.8 ENSMUST00000179873.8 |
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| CDS CAA 90 bp | AATCCCATACAGCACTTGTGGTCAGTCCATTGTTCTCTTGCTGAGTaGGCTCTGGAAGTGTGTATTCTACTAGTTGGTACAGTTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: NPIQHLWSVHCSLAE*ALEVCILLVGTVDA Trigger: GGCATCAACTGTACCAACTAGTAGAATACACACTTCCAGAGCCAACTCAGCAAGAGAACAATGGACTGACCACAAGTGCTGTATGGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000179873.8 |
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| CDS TCA 72 bp | GATGGGTGCATAAAGGAAGGATTTTCGATATTTCAATaGAACATACCTAGACAGAGCCTGGCCTCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: DGCIKEGFSIFQ*NIPRQSLASWP Trigger: TGGCCAGGAGGCCAGGCTCTGTCTAGGTATGTTTCATTGAAATATCGAAAATCCTTCCTTTATGCACCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111547.2 ENSMUST00000111548.8 |
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| CDS CAA 72 bp | TTAGTTAAAACAGGAAAAGGATTCAGTCCATTTAATTaGCAATTTAGTGTAATCGCCATTCCTGCAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVKTGKGFSPFN*QFSVIAIPAMG Trigger: CCCCATTGCAGGAATGGCGATTACACTAAATTGCAAATTAAATGGACTGAATCCTTTTCCTGTTTTAACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047531.16 ENSMUST00000111551.2 ENSMUST00000147934.4 ENSMUST00000166416.8 ENSMUST00000179873.8 |
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