Pregenerated sensors for ETFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004610Ensembl transcript IDs: ENSMUST00000004729.5, ENSMUST00000205363.2, ENSMUST00000206196.2, ENSMUST00000206286.2, ENSMUST00000206411.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCTCAGATCCGCCCCGTTCGGATGGTCTCCTaGCACTGTGAGGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LERHSFIAEYQGGSQIRPVRMVS*HCEGPQ Trigger: CTGTGGCCCCTCACAGTGCCAGGAGACCATCCGAAC...GGGGCGGATCTGAGACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206411.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTTCGGATGGTCTCCTaGCACTGTGAGGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: GKRQWLGKAQFYCRVSGRVRMVS*HCEGPQ Trigger: CTGTGGCCCCTCACAGTGCCAGGAGACCATCCGAAC...CCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CCA 90 bp | TTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCTCAGATCCGCCCCCCTGGTATCTCCACGTaGATGCCTCTGTCTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: LERHSFIAEYQGGSQIRPPGIST*MPLSAP Trigger: GGGTGCAGACAGAGGCATCCACGTGGAGATACCAGG...GGGGCGGATCTGAGACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206411.2 |
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| CDS-3UTR TCA 90 bp | TGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCTCAGATCCGCCCCACTGTGGTCTCCACCTTaGCTCCTGCATGATGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: WKGTVLLQSIREGLRSAPLWSPP*LLHDVG Trigger: CCCAACATCATGCAGGAGTCAAGGTGGAGACCACAG...TGGGGCGGATCTGAGACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206411.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGCCACCTCCTTCAGCTTaGCCACCAGGTCTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GKRQWLGKAQFYCRVSGRPPPSA*PPGLLW Trigger: CCACAGAAGACCTGGTGGCCAAGCTGAAGGAGGTGG...CCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR TCA 90 bp | AAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTGGGGCTCTTCCACACTaGTCACAGAGACCTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KEAVAWKGTVLLQSIREGGALPH*SQRPWR Trigger: CCTCCAAGGTCTCTGTGATCAGTGTGGAAGAGCCCC...ACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGCTCTGTCTGCACCCATaGCCAGAGCAGTTCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RKEAVAWKGTVLLQSIRELCLHP*PEQFGW Trigger: CCATCCGAACTGCTCTGGCCATGGGTGCAGACAGAG...CTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CCA 90 bp | AAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCCTGGTATCTCCACGTaGATGCCTCTGTCTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: KEAVAWKGTVLLQSIREGPGIST*MPLSAP Trigger: GGGTGCAGACAGAGGCATCCACGTGGAGATACCAGG...ACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CCA 90 bp | TTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCTCAGATCCGCCCCCACAGAAGGGGTTCATaGAGTGCTTCACACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LERHSFIAEYQGGSQIRPHRRGS*SASHHQ Trigger: CTGATGGTGTGAAGCACTCCATGAACCCCTTCTGTG...GGGGCGGATCTGAGACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206411.2 |
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| CDS-3UTR CCA 90 bp | GAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGCACAGAAGGGGTTCATaGAGTGCTTCACACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: ERGSGLERHSFIAEYQGGHRRGS*SASHHQ Trigger: CTGATGGTGTGAAGCACTCCATGAACCCCTTCTGTG...CCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR TCA 90 bp | GAGGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGATCTTCTTGGCTTTCATaGTGTTGGGCAGGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: EERGSGLERHSFIAEYQGSSWLS*CWAGWH Trigger: ATGCCACCCTGCCCAACATCATGAAAGCCAAGAAGA...TCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR TCA 90 bp | AGGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGCCAGGTCTCCAGCCTTaGCCACTTCAATCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RKEAVAWKGTVLLQSIREPGLQP*PLQSSS Trigger: AGAAGAAGATTGAAGTGGTCAAGGCTGGAGACCTGG...CTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS CCA 90 bp | CCTGTGCCCCTGGTATCTCCACGTGGATGCCTCTGTCTGCACCCATaGCCAGAGCAGTTCGGATGGTCTCCTGGCACTGTGAGGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: PVPLVSPRGCLCLHP*PEQFGWSPGTVRGH Trigger: GTGGCCCCTCACAGTGCCAGGAGACCATCCGAACTGCTCTGGCCATGGGTGCAGACAGAGGCATCCACGTGGAGATACCAGGGGCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004729.5 ENSMUST00000206196.2 ENSMUST00000206411.2 |
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| CDS CCA 90 bp | TGCAGGGGGCCTAAGCTTTCTGCCTGTGCCCCTGGTATCTCCACGTaGATGCCTCTGTCTGCACCCATGGCCAGAGCAGTTCGGATGGTC | + |
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Preference number: 5 (lower is better) Translates to: CRGPKLSACAPGIST*MPLSAPMARAVRMV Trigger: GACCATCCGAACTGCTCTGGCCATGGGTGCAGACAGAGGCATCCACGTGGAGATACCAGGGGCACAGGCAGAAAGCTTAGGCCCCCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004729.5 ENSMUST00000206196.2 ENSMUST00000206411.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCTCAGATCCGCCCCACAAGTCGATGACCCTCTaGACAGCCACGAGCGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: GKAQFYCRVSGRVSDPPHKSMTL*TATSAR Trigger: GCGCGCGCTCGTGGCTGTCAAGAGGGTCATCGACTT...GTGGGGCGGATCTGAGACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206411.2 |
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| CDS-3UTR CAA 90 bp | TTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCTCAGATCCGCCCCTCCTTTTCAGCCAGCTaGGCCAGGACCCGGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: LERHSFIAEYQGGSQIRPSFSAS*ARTRAT Trigger: GGTGGCCCGGGTCCTGGCCAAGCTGGCTGAAAAGGA...GGGGCGGATCTGAGACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206411.2 |
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| CDS-3UTR CAA 90 bp | GAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCCTTTTCAGCCAGCTaGGCCAGGACCCGGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: ERGSGLERHSFIAEYQGGSFSAS*ARTRAT Trigger: GGTGGCCCGGGTCCTGGCCAAGCTGGCTGAAAAGGA...CCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS TCA 90 bp | TCACAGAGACCTTGGAGGTCAGGTCCACGCCCAGGTCTCCAGCCTTaGCCACTTCAATCTTCTTCTTCTTGGCTTTCTGCGGCCAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SQRPWRSGPRPGLQP*PLQSSSSWLSAASP Trigger: TGGACTGGCCGCAGAAAGCCAAGAAGAAGAAGATTGAAGTGGTCAAGGCTGGAGACCTGGGCGTGGACCTGACCTCCAAGGTCTCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205363.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGAAGTCGATGACCCTCTaGACAGCCACGAGCGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: GKRQWLGKAQFYCRVSGRKSMTL*TATSAR Trigger: GCGCGCGCTCGTGGCTGTCAAGAGGGTCATCGACTT...CCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CAA 90 bp | TTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCTCAGATCCGCCCCCGTTCCACTTTTACCTaGTCCCCCTCCAGTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: LERHSFIAEYQGGSQIRPRSTFT*SPSSVT Trigger: GGTGACACTGGAGGGGGACAAGGTAAAAGTGGAACG...GGGGCGGATCTGAGACCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000206411.2 |
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| CDS-3UTR CAA 90 bp | GAGGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGACTGATCACAGAGACCTaGGAGGTCAGGTCCACGCCC | + |
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Preference number: 5 (lower is better) Translates to: EERGSGLERHSFIAEYQGLITET*EVRSTP Trigger: GGGCGTGGACCTGACCTCCAAGGTCTCTGTGATCAG...TCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CAA 90 bp | GAGGAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGACGTTCCACTTTTACCTaGTCCCCCTCCAGTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: EERGSGLERHSFIAEYQGRSTFT*SPSSVT Trigger: GGTGACACTGGAGGGGGACAAGGTAAAAGTGGAACG...TCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CAA 90 bp | GAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCATCAATAGCCTGCTaGCCCAGGAACAAAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: ERGSGLERHSFIAEYQGGSSIAC*PRNKRS Trigger: GGACCTTTTGTTCCTGGGCAAGCAGGCTATTGATGA...CCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS-3UTR CAA 90 bp | GAAAGAGGCAGTGGCTTGGAAAGGCACAGTTTTATTGCAGAGTATCAGGGAGGGTCAATCTTCTTCTTCTaGGCTTTCATGATGTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: ERGSGLERHSFIAEYQGGSIFFF*AFMMLG Trigger: GCCCAACATCATGAAAGCCAAGAAGAAGAAGATTGA...CCCTCCCTGATACTCTGCAATAAAACTGTGCCTTTCCAAGCCACTGCCTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004729.5 |
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| CDS TCA 72 bp | CATGGCCAGAGCAGTTCGGATGGTCTCCTGGCACTGTaGGGGGCCACAGCTGACGGCAATGATCTCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: HGQSSSDGLLAL*GATADGNDLLH Trigger: GTGAAGGAGATCATTGCCGTCAGCTGTGGCCCCTCACAGTGCCAGGAGACCATCCGAACTGCTCTGGCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004729.5 ENSMUST00000206196.2 ENSMUST00000206411.2 |
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| CDS CCA 72 bp | CTGGTATCTCCACGTGGATGCCTCTGTCTGCACCCATaGCCAGAGCAGTTCGGATGGTCTCCTGGCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LVSPRGCLCLHP*PEQFGWSPGTV Trigger: CACAGTGCCAGGAGACCATCCGAACTGCTCTGGCCATGGGTGCAGACAGAGGCATCCACGTGGAGATACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004729.5 ENSMUST00000206196.2 ENSMUST00000206411.2 |
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| CDS TCA 72 bp | CGTTCCACTTTTACCTTGTCCCCCTCCAGTGTCACCTaGGAGGCGAATGTACCCTGCGGCCAGTCCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RSTFTLSPSSVT*EANVPCGQSRS Trigger: ACTTCTGGACTGGCCGCAGGGTACATTCGCCTCTCAGGTGACACTGGAGGGGGACAAGGTAAAAGTGGAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004729.5 ENSMUST00000206196.2 ENSMUST00000206286.2 ENSMUST00000206411.2 |
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| CDS CAA 90 bp | ATCACAGAGACCTTGGAGGTCAGGTCCACGCCCAGGTCTCCAGCCTaGACCACTTCAATCTTCTTCTTCTTGGCTTTCTGCGGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: ITETLEVRSTPRSPA*TTSIFFFLAFCGQS Trigger: GGACTGGCCGCAGAAAGCCAAGAAGAAGAAGATTGAAGTGGTCAAGGCTGGAGACCTGGGCGTGGACCTGACCTCCAAGGTCTCTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205363.2 |
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| CDS CAA 72 bp | ACCTTGGAGGTCAGGTCCACGCCCAGGTCTCCAGCCTaGACCACTTCAATCTTCTTCTTCTTGGCTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLEVRSTPRSPA*TTSIFFFLAFC Trigger: GCAGAAAGCCAAGAAGAAGAAGATTGAAGTGGTCAAGGCTGGAGACCTGGGCGTGGACCTGACCTCCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205363.2 |
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| CDS TCA 72 bp | CACAGAAGGGGTTCATGGAGTGCTTCACACCATCAGTaGCCACTCCAGACTTGTCCGGCTTTACCCGAATCT | + |
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Preference number: 6 (lower is better) Translates to: HRRGSWSASHHQ*PLQTCPALPES Trigger: AGATTCGGGTAAAGCCGGACAAGTCTGGAGTGGTCACTGATGGTGTGAAGCACTCCATGAACCCCTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004729.5 ENSMUST00000206196.2 ENSMUST00000206286.2 ENSMUST00000206411.2 |
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| CDS CAA 72 bp | ATGGAGTGCTTCACACCATCAGTGACCACTCCAGACTaGTCCGGCTTTACCCGAATCTTCACAGCGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: MECFTPSVTTPD*SGFTRIFTAKS Trigger: CGACTTCGCTGTGAAGATTCGGGTAAAGCCGGACAAGTCTGGAGTGGTCACTGATGGTGTGAAGCACTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004729.5 ENSMUST00000206196.2 ENSMUST00000206286.2 ENSMUST00000206411.2 |
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| CDS CAA 72 bp | ACCTTGGAGGTCAGGTCCACGCCCAGGTCTCCAGCCTaGACCACTTCAATCTTCTTCTTCTTGGCTTTCATG | + |
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Preference number: 6 (lower is better) Translates to: TLEVRSTPRSPA*TTSIFFFLAFM Trigger: CATGAAAGCCAAGAAGAAGAAGATTGAAGTGGTCAAGGCTGGAGACCTGGGCGTGGACCTGACCTCCAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004729.5 ENSMUST00000206286.2 |
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| CDS CAA 90 bp | ATCACAGAGACCTTGGAGGTCAGGTCCACGCCCAGGTCTCCAGCCTaGACCACTTCAATCTTCTTCTTCTTGGCTTTCATGATGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ITETLEVRSTPRSPA*TTSIFFFLAFMMLG Trigger: GCCCAACATCATGAAAGCCAAGAAGAAGAAGATTGAAGTGGTCAAGGCTGGAGACCTGGGCGTGGACCTGACCTCCAAGGTCTCTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004729.5 ENSMUST00000206286.2 |
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