Pregenerated sensors for ETF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024360Ensembl transcript IDs: ENSMUST00000025218.8
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAATGCCAGGCACAACTGTGCCTCCACACTGGTGACTGCCCAGAGTaGCCTGGCCCCAGTGTGTTGGCACTCAGTCTGACTTTACAACGC | + |
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Preference number: 1 (lower is better) Translates to: KCQAQLCLHTGDCPE*PGPSVLALSLTLQR Trigger: GCGTTGTAAAGTCAGACTGAGTGCCAACACACTGGGGCCAGGGCACTCTGGGCAGTCACCAGTGTGGAGGCACAGTTGTGCCTGGCATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR TCA 90 bp | GTGACTGCCCAGAGTGCCCTGGCCCCAGTGTGTTGGCACTCAGTCTaGCTTTACAACGCAACCTGCACCTTTGAAAGGGACAGTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: VTAQSALAPVCWHSV*LYNATCTFERDSLG Trigger: TCCCAGACTGTCCCTTTCAAAGGTGCAGGTTGCGTTGTAAAGTCAGACTGAGTGCCAACACACTGGGGCCAGGGCACTCTGGGCAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR TCA 90 bp | GAAGCCCATCATGTCCATCCCAGACTGGTTTCTAGTAGGCTGAGATaGCAGGGAGCCTCAGTAACGCTAATGGCACAGAGGGCTCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: EAHHVHPRLVSSRLR*QGASVTLMAQRAPK Trigger: TTTGGGAGCCCTCTGTGCCATTAGCGTTACTGAGGCTCCCTGTCATCTCAGCCTACTAGAAACCAGTCTGGGATGGACATGATGGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTGCAGGCTACGGTTTCACCCCTCACTTATGTGTGTTTGTATGCGTAAGTTTGAATGCTGGAGGGTaGGGCACGGTTGCCGGACCC | + |
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Preference number: 2 (lower is better) Translates to: GSAGYGFTPHLCVFVCVSLNAGG*GTVAGP Trigger: GGGTCCGGCAACCGTGCCTCACCCTCCAGCATTCAA...ACTTACGCATACAAACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR TCA 90 bp | AACACAAGGAAACACCACCGCCTCCCCTTACCAAGAATAGATCCAAGCAAAATCGTGCCTCCACACTGGTaGCTGCCCAGAGTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NTRKHHRLPLPRIDPSKIVPPHW*LPRVPW Trigger: CCAGGGCACTCTGGGCAGTCACCAGTGTGGAGGCAC...GATTTTGCTTGGATCTATTCTTGGTAAGGGGAGGCGGTGGTGTTTCCTTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR GCA 90 bp | AACACAAGGAAACACCACCGCCTCCCCTTACCAAGAATAGATCCAAGCAAAATCCTCCACACTGGTGACTaGCCAGAGTGCCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: NTRKHHRLPLPRIDPSKILHTGD*PECPGP Trigger: GGGGCCAGGGCACTCTGGGCAGTCACCAGTGTGGAG...GATTTTGCTTGGATCTATTCTTGGTAAGGGGAGGCGGTGGTGTTTCCTTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTGCAGGCTACGGTTTCACCCCTCACTTATGTGTGTTTGTATGCGTAAGTTGCCAGGCACAACTGTaGCTCCACACTGGTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: GSAGYGFTPHLCVFVCVSCQAQL*LHTGDC Trigger: GCAGTCACCAGTGTGGAGGCACAGTTGTGCCTGGCA...ACTTACGCATACAAACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTGCAGGCTACGGTTTCACCCCTCACTTATGTGTGTTTGTATGCGTAAGTCAGAGGGCTCCCAAATaGCAGGCACAACTGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GSAGYGFTPHLCVFVCVSQRAPK*QAQLCL Trigger: GAGGCACAGTTGTGCCTGGCATTTGGGAGCCCTCTG...ACTTACGCATACAAACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTGCAGGCTACGGTTTCACCCCTCACTTATGTGTGTTTGTATGCGTAAGTTGGTTTCTAGTAGGCTaGGATGACAGGGAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GSAGYGFTPHLCVFVCVSWFLVG*DDREPQ Trigger: CTGAGGCTCCCTGTCATCTCAGCCTACTAGAAACCA...ACTTACGCATACAAACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR TCA 90 bp | AACACAAGGAAACACCACCGCCTCCCCTTACCAAGAATAGATCCAAGCAAAATCCGCAACCTGCACCTTTaGAAGGGACAGTCTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: NTRKHHRLPLPRIDPSKIRNLHL*KGQSGS Trigger: ACTCCCAGACTGTCCCTTTCAAAGGTGCAGGTTGCG...GATTTTGCTTGGATCTATTCTTGGTAAGGGGAGGCGGTGGTGTTTCCTTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTGCAGGCTACGGTTTCACCCCTCACTTATGTGTGTTTGTATGCGTAAGTAAAACCCTAAGGTACTaGTGGGAAGGGTGTGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: GSAGYGFTPHLCVFVCVSKTLRY*WEGCVR Trigger: GCGAACACACCCTTCCCAGCAGTACCTTAGGGTTTT...ACTTACGCATACAAACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTGCAGGCTACGGTTTCACCCCTCACTTATGTGTGTTTGTATGCGTAAGTGGACAGACAGTCATTTaGACCTCAGGGTACAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GSAGYGFTPHLCVFVCVSGQTVI*TSGYSV Trigger: CACACTGTACCCTGAGGTCCAAATGACTGTCTGTCC...ACTTACGCATACAAACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR GCA 72 bp | GCACAACTGTGCCTCCACACTGGTGACTGCCCAGAGTaGCCTGGCCCCAGTGTGTTGGCACTCAGTCTGACT | + |
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Preference number: 3 (lower is better) Translates to: AQLCLHTGDCPE*PGPSVLALSLT Trigger: AGTCAGACTGAGTGCCAACACACTGGGGCCAGGGCACTCTGGGCAGTCACCAGTGTGGAGGCACAGTTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR GCA 72 bp | GCCTCAGTAACGCTAATGGCACAGAGGGCTCCCAAATaGCAGGCACAACTGTGCCTCCACACTGGTGACTGC | + |
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Preference number: 3 (lower is better) Translates to: ASVTLMAQRAPK*QAQLCLHTGDC Trigger: GCAGTCACCAGTGTGGAGGCACAGTTGTGCCTGGCATTTGGGAGCCCTCTGTGCCATTAGCGTTACTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR TCA 72 bp | CAGAGTGCCCTGGCCCCAGTGTGTTGGCACTCAGTCTaGCTTTACAACGCAACCTGCACCTTTGAAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QSALAPVCWHSV*LYNATCTFERD Trigger: GTCCCTTTCAAAGGTGCAGGTTGCGTTGTAAAGTCAGACTGAGTGCCAACACACTGGGGCCAGGGCACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR TCA 72 bp | GCACTCAGTCTGACTTTACAACGCAACCTGCACCTTTaGAAGGGACAGTCTGGGAGTGGGGAGTGTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: ALSLTLQRNLHL*KGQSGSGECEG Trigger: TCCCTCACACTCCCCACTCCCAGACTGTCCCTTTCAAAGGTGCAGGTTGCGTTGTAAAGTCAGACTGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR TCA 72 bp | CATGTCCATCCCAGACTGGTTTCTAGTAGGCTGAGATaGCAGGGAGCCTCAGTAACGCTAATGGCACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: HVHPRLVSSRLR*QGASVTLMAQR Trigger: CCTCTGTGCCATTAGCGTTACTGAGGCTCCCTGTCATCTCAGCCTACTAGAAACCAGTCTGGGATGGACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR-3UTR CAA 90 bp | GGGAGTGCAGGCTACGGTTTCACCCCTCACTTATGTGTGTTTGTATGCGTAAGTACGCAACCTGCACCTTaGAAAGGGACAGTCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GSAGYGFTPHLCVFVCVSTQPAP*KGTVWE Trigger: CTCCCAGACTGTCCCTTTCAAAGGTGCAGGTTGCGT...ACTTACGCATACAAACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| 3UTR CAA 72 bp | ACTGGTGACTGCCCAGAGTGCCCTGGCCCCAGTGTGTaGGCACTCAGTCTGACTTTACAACGCAACCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TGDCPECPGPSV*ALSLTLQRNLH Trigger: GTGCAGGTTGCGTTGTAAAGTCAGACTGAGTGCCAACACACTGGGGCCAGGGCACTCTGGGCAGTCACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| CDS-3UTR GCA 90 bp | GGATTCTTTTTAAATGAGTCCACAGTGGCCTTTAGAGACTTAGTTGTCGGCTGCGCGATATCATGCTCGTaGCATTGCCGCGGGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GFFLNESTVAFRDLVVGCAISCS*HCRGPP Trigger: AGGCGGCCCGCGGCAATGGCACGAGCATGATATCGC...GCAGCCGACAACTAAGTCTCTAAAGGCCACTGTGGACTCATTTAAAAAGAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| CDS-3UTR TCA 90 bp | GGATTCTTTTTAAATGAGTCCACAGTGGCCTTTAGAGACTTAGTTGTCGGCTGCGGCAAAACGCAAGGCTaGTTGACCTCCTCTGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GFFLNESTVAFRDLVVGCGKTQG*LTSSAV Trigger: CACGGCAGAGGAGGTCAATCAGCCTTGCGTTTTGCC...GCAGCCGACAACTAAGTCTCTAAAGGCCACTGTGGACTCATTTAAAAAGAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| CDS-3UTR TCA 90 bp | GGATTCTTTTTAAATGAGTCCACAGTGGCCTTTAGAGACTTAGTTGTCGGCTGCAAACGCAAGGCTGATTaGCCTCCTCTGCCGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GFFLNESTVAFRDLVVGCKRKAD*PPLPCF Trigger: GAAACACGGCAGAGGAGGTCAATCAGCCTTGCGTTT...GCAGCCGACAACTAAGTCTCTAAAGGCCACTGTGGACTCATTTAAAAAGAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| CDS-3UTR GCA 90 bp | AACACAAGGAAACACCACCGCCTCCCCTTACCAAGAATAGATCCAAGCAAAATCCTGATTGACCTCCTCTaGCGTGTTTCTTTGGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: NTRKHHRLPLPRIDPSKILIDLL*RVSLGD Trigger: ATCTCCCAAAGAAACACGGCAGAGGAGGTCAATCAG...GATTTTGCTTGGATCTATTCTTGGTAAGGGGAGGCGGTGGTGTTTCCTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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| CDS-3UTR TCA 90 bp | GGATTCTTTTTAAATGAGTCCACAGTGGCCTTTAGAGACTTAGTTGTCGGCTGCGTAAGAGCCTCTGTATaGAACTTATTGTCGCACAAA | + |
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Preference number: 4 (lower is better) Translates to: GFFLNESTVAFRDLVVGCVRASV*NLLSHK Trigger: TTTGTGCGACAATAAGTTTCATACAGAGGCTCTTAC...GCAGCCGACAACTAAGTCTCTAAAGGCCACTGTGGACTCATTTAAAAAGAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025218.8 |
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