Pregenerated sensors for ETAA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016984Ensembl transcript IDs: ENSMUST00000076661.7
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTTaGGCATGGTGGCACACATCTGTACTTAAAAGCACAGGGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GQADLVCDSESSTVS*AWWHTSVLKSTGRL Trigger: CAGCCTCCCTGTGCTTTTAAGTACAGATGTGTGCCACCATGCCCAACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| 3UTR CCA 90 bp | GACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTTGGGCATGGTaGCACACATCTGTACTTAAAAGCACAGGGAGGCTGAGGCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: DLVCDSESSTVSWAW*HTSVLKSTGRLRQE Trigger: CTCTTGCCTCAGCCTCCCTGTGCTTTTAAGTACAGATGTGTGCCACCATGCCCAACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| 3UTR CCA 90 bp | GCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTTGGGCATaGTGGCACACATCTGTACTTAAAAGCACAGGGAGGCTGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: ADLVCDSESSTVSWA*WHTSVLKSTGRLRQ Trigger: TTGCCTCAGCCTCCCTGTGCTTTTAAGTACAGATGTGTGCCACCATGCCCAACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| 3UTR TCA 72 bp | GGTGGCACACATCTGTACTTAAAAGCACAGGGAGGCTaGGGCAAGAGGATCACTGATAGTGTGGGGCCATTT | + |
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Preference number: 3 (lower is better) Translates to: GGTHLYLKAQGG*GKRITDSVGPF Trigger: AAATGGCCCCACACTATCAGTGATCCTCTTGCCTCAGCCTCCCTGTGCTTTTAAGTACAGATGTGTGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| 3UTR-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGAAGGACAGGCTGACCTaGTCTGTGACTCTGAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: QFVKALRHLNSSEHQIKMKDRLT*SVTLKV Trigger: TACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTT...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTGCAGGGCTGTCCGCATaGTTCCTTCGCCGACTCATT | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCAGLSA*FLRRLI Trigger: AATGAGTCGGCGAAGGAAGCATGCGGACAGCCCTGC...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTGCTGGCTTTCACTCTTaGCTTCTCTTTTGCTACGCC | + |
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Preference number: 4 (lower is better) Translates to: LTQGQADLVCDSESSTVSAGFHS*LLFCYA Trigger: GGCGTAGCAAAAGAGAAGTCAAGAGTGAAAGCCAGC...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTTGGTCAAAGGGTTTCTaGCTGCTGTCTTGTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCWSKGF*LLSCAF Trigger: AAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCA...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CCA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTCTTCAACCATTTCACTaGCCAACAGCGGATCATTCC | + |
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Preference number: 4 (lower is better) Translates to: LTQGQADLVCDSESSTVSLQPFH*PTADHS Trigger: GGAATGATCCGCTGTTGGCCAGTGAAATGGTTGAAG...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTCTGACTGCTGTCTTGTaGCTTTGCCAAGGATATTCT | + |
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Preference number: 4 (lower is better) Translates to: LTQGQADLVCDSESSTVSLTAVL*LCQGYS Trigger: AGAATATCCTTGGCAAAGGCACAAGACAGCAGTCAG...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTAATCCTCTGAGATTTTaGCAACAGGCACACTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LTQGQADLVCDSESSTVSNPLRF*QQAHFP Trigger: TGGGAAGTGTGCCTGTTGGCAAAATCTCAGAGGATT...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTATTTTGTTGTCATTCTaGGCTGTATCTGCTAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCILLSF*AVSAKL Trigger: CAGCTTAGCAGATACAGCTCAGAATGACAACAAAAT...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTTCTCTGACTCCTCGCTaGCCTTGTTTTCTTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFSLTPR*PCFLAE Trigger: CTCAGCAAGAAAACAAGGGCAGCGAGGAGTCAGAGA...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTGTCATTGGAGAATTTTaGTCCCAGAAGATATCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCVIGEF*SQKISV Trigger: AACTGATATCTTCTGGGATCAAAATTCTCCAATGAC...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTACGGTTAACAATATGTaGAATCTCATCACTGTATGC | + |
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Preference number: 4 (lower is better) Translates to: LTQGQADLVCDSESSTVSTVNNM*NLITVC Trigger: GCATACAGTGATGAGATTTCACATATTGTTAACCGT...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTTCACTTTATTTCCTGTaGATGGTACCTTCCTTGATT | + |
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Preference number: 4 (lower is better) Translates to: LTQGQADLVCDSESSTVSSLYFL*MVPSLI Trigger: AATCAAGGAAGGTACCATTCACAGGAAATAAAGTGA...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTGGAAGAATTCAACTTTaGTCCATGAGACTGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCGRIQL*SMRLIC Trigger: ACAAATCAGTCTCATGGATCAAAGTTGAATTCTTCC...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTCTTCAAGCAATGAATTaGCAGTTTCCCTTTTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCLQAMN*QFPFFL Trigger: TAGGAAAAAGGGAAACTGTCAATTCATTGCTTGAAG...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTGCCCATCTCCACATCTaGCTCTTTTCTGTACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFAHLHI*LFSVLS Trigger: TGACAGTACAGAAAAGAGGCAGATGTGGAGATGGGC...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTATCAGTTTGTCCATCTaGATCATTTGGAGAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCISLSI*IIWRTE Trigger: TTCAGTTCTCCAAATGATCCAGATGGACAAACTGAT...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CCA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTTTAATTTTGTGCAGCTaGCTTTCACTCTTGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LTQGQADLVCDSESSTVSLILCS*LSLLTS Trigger: AGAAGTCAAGAGTGAAAGCCAGCTGCACAAAATTAA...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CCA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTTTCATCTGGGGAAGATaGTTTCAAAGACTCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: LTATPAPFSLKALLLAHCFIWGR*FQRLRI Trigger: TATTCTGAGTCTTTGAAACCATCTTCCCCAGATGAA...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGCAAAGGGTTTCTGACTaGTGTCTTGTGCCTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMQRVSD*CLVPLP Trigger: TGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTG...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGAAGCTGTGTATCAGGTaGTGCTGGTGTCTTAGGACA | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMKLCIR*CWCLRT Trigger: TGTCCTAAGACACCAGCAGCACCTGATACACAGCTT...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTTCACAGGAGTACAAGTaGTTTCAGGAACTACATCAC | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFSQEYK*FQELHH Trigger: GTGATGTAGTTCCTGAAATCACTTGTACTCCTGTGA...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTGTACAAATTGCCTTCTaGCAAGTATCTTGGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFVQIAF*QVSWAV Trigger: AACTGCCCAAGATACTTGTCAGAAGGCAATTTGTAC...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGGCTGACTGCACAGTATaGAAAGCTTTGGCCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMADCTV*KALAFL Trigger: AAGAAAGGCCAAAGCTTTGCATACTGTGCAGTCAGC...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGGAAATGGGAGCTGACTaGACAGTATGCAAAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMEMGAD*TVCKAL Trigger: CAAAGCTTTGCATACTGTGCAGTCAGCTCCCATTTC...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTTCCATCTGGATCATTTaGAGAACTGAAGGTACAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFSIWII*RTEGTG Trigger: TCCTGTACCTTCAGTTCTCCAAATGATCCAGATGGA...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTACGGTAGTATCTATTTaGGGGGAAAGTGATATTGGA | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFTVVSI*GESDIG Trigger: TCCAATATCACTTTCCCCTCAAATAGATACTACCGT...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTATGTCATCACAAGCCTaGCAGAACAAATCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFMSSQA*QNKSSS Trigger: AGATGATGATTTGTTCTGTCAGGCTTGTGATGACAT...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTTCCTGCCTTTTTCGTTaGATTTCTTCAGGAGAATAC | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFSCLFR*ISSGEY Trigger: GTATTCTCCTGAAGAAATTCAACGAAAAAGGCAGGA...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTCTGTCTCCTTTCATTTaGTTCTTCACAGGAGTACAA | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFLSPFI*FFTGVQ Trigger: TTGTACTCCTGTGAAGAAGCAAATGAAAGGAGACAG...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGTCCATACTCCCAGCATaGAATTTGTCACTGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMSILPA*NLSLVS Trigger: AGAAACCAGTGACAAATTCCATGCTGGGAGTATGGA...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTATCTGGATAAAATCATaGTTCTTCCCATCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFIWIKS*FFPSCS Trigger: AGAGCAAGATGGGAAGAATCATGATTTTATCCAGAT...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGCCCTTGTTTTCTTGCTaGGTTAGTCTTTCAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMPLFSC*VSLSMS Trigger: TGACATTGAAAGACTAACTCAGCAAGAAAACAAGGG...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTTCCAAGAACAAATTTTaGGCTATTCACTTGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFSKNKF*AIHLYW Trigger: CCAGTACAAGTGAATAGCTCAAAATTTGTTCTTGGA...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR TCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGCTCAGAATAGTTTATTaGAGATTGCTGCTGATTAGC | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMLRIVY*RLLLIS Trigger: GCTAATCAGCAGCAATCTTCAATAAACTATTCTGAG...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR GCA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGAATCTCATCACTGTATaGACTGGAAATCTGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: QFVKALRHLNSSEHQIKMNLITV*TGNLLF Trigger: AAAAAGCAGATTTCCAGTGCATACAGTGATGAGATT...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 90 bp | TGCCGCTGCGCCCGCCGCGCAGACCGCGTTCCCGCCCGGCGGAGCTaGGAGCTGCAGGCCGCCCTGGACTCCCGCAGCCACGGCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: CRCARRADRVPARRS*ELQAALDSRSHGSA Trigger: GGCAGAGCCGTGGCTGCGGGAGTCCAGGGCGGCCTGCAGCTCCCAGCTCCGCCGGGCGGGAACGCGGTCTGCGCGGCGGGCGCAGCGGCA 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 90 bp | GAGCTGGGAGCTGCAGGCCGCCCTGGACTCCCGCAGCCACGGCTCTaGCGCCGGGCGGCAGTTCTTAGCAGCCGCCCTGTGCGGCGTGCT | + |
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Preference number: 5 (lower is better) Translates to: ELGAAGRPGLPQPRL*RRAAVLSSRPVRRA Trigger: AGCACGCCGCACAGGGCGGCTGCTAAGAACTGCCGCCCGGCGGCAGAGCCGTGGCTGCGGGAGTCCAGGGCGGCCTGCAGCTCCCAGCTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 90 bp | GCAGCCGCCCTGTGCGGCGTGCTCCTCCGGGCAGGGCTGTCCGCATaGTTCCTTCGCCGACTCATTCCCGTGCCACCGTCCTTCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AAALCGVLLRAGLSA*FLRRLIPVPPSFSC Trigger: GCAGCTGAAGGACGGTGGCACGGGAATGAGTCGGCGAAGGAAGCATGCGGACAGCCCTGCCCGGAGGAGCACGCCGCACAGGGCGGCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 90 bp | AAATCATCATCTACCTCGCCTGCGTCCCAGGTAGCCTCTAACCGATaGCATGCTTCAACCATTTCACTGGCCAACAGCGGATCATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: KSSSTSPASQVASNR*HASTISLANSGSFQ Trigger: CTGGAATGATCCGCTGTTGGCCAGTGAAATGGTTGAAGCATGCCATCGGTTAGAGGCTACCTGGGACGCAGGCGAGGTAGATGATGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 90 bp | GGCACTGCAGAGCTGACAACATTCCAATGTTTAGATGGCGCCGACTaGCTTGCTTGTTTAGATGCAGTAGAGCTACTTCTGGACCCACGA | + |
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Preference number: 5 (lower is better) Translates to: GTAELTTFQCLDGAD*LACLDAVELLLDPR Trigger: TCGTGGGTCCAGAAGTAGCTCTACTGCATCTAAACAAGCAAGCCAGTCGGCGCCATCTAAACATTGGAATGTTGTCAGCTCTGCAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTGTAGCATCCAAAATATaGGGCCCATCTCCACATCTG | + |
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Preference number: 5 (lower is better) Translates to: LTATPAPFSLKALLLAHCVASKI*GPSPHL Trigger: CAGATGTGGAGATGGGCCCAATATTTTGGATGCTAC...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTTGCTGTCTTGTGCCTTaGCCAAGGATATTCTACTGT | + |
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Preference number: 5 (lower is better) Translates to: LTATPAPFSLKALLLAHCCCLVP*PRIFYC Trigger: ACAGTAGAATATCCTTGGCAAAGGCACAAGACAGCA...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CTCACACAAGGACAGGCTGACCTTGTCTGTGACTCTGAAAGTAGCACAGTAAGTCTTCTGACAAGTATCTaGGGCAGTTGTAGAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTQGQADLVCDSESSTVSLLTSI*GSCRRN Trigger: GTTCCTTCTACAACTGCCCAAGATACTTGTCAGAAG...ACTTACTGTGCTACTTTCAGAGTCACAGACAAGGTCAGCCTGTCCTTGTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS-3UTR CAA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTACAGTATGCAAAGCTTaGGCCTTTCTTCGAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LTATPAPFSLKALLLAHCTVCKA*AFLRTS Trigger: ACTGGTTCGAAGAAAGGCCAAAGCTTTGCATACTGT...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS-3UTR CAA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTCCAGAAGATATCAGTTaGTCCATCTGGATCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTATPAPFSLKALLLAHCPEDIS*SIWIIW Trigger: CCAAATGATCCAGATGGACAAACTGATATCTTCTGG...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTATGATTCTTCCCATCTaGCTCTTGGATCACATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTATPAPFSLKALLLAHCMILPI*LLDHIK Trigger: CTTGATGTGATCCAAGAGCAAGATGGGAAGAATCAT...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTCGCCGACTGGCTTGCTaGTTTAGATGCAGTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFRRLAC*FRCSRA Trigger: AGCTCTACTGCATCTAAACAAGCAAGCCAGTCGGCG...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTGATCCAGTGTTACTTTaGAATCTCTTAACCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LTATPAPFSLKALLLAHCDPVLL*NLLTFH Trigger: GTGGAAGGTTAAGAGATTCAAAAGTAACACTGGATC...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 90 bp | GGCTGCTTCAACATTTTGGTCAAAGGGTTTCTGACTGCTGTCTTGTaGCTTTGCCAAGGATATTCTACTGTCTCCTTTCATTTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCFNILVKGFLTAVL*LCQGYSTVSFHLLL Trigger: AAGAAGCAAATGAAAGGAGACAGTAGAATATCCTTGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCAAAATGTTGAAGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS-3UTR CAA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTCTCTTGACTTCTCTTTaGCTACGCCAGGAGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFLLTSL*LRQEYK Trigger: CTTGTACTCCTGGCGTAGCAAAAGAGAAGTCAAGAG...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CTTACTGCCACCCCCGCCCCCTTTAGTTTAAAGGCTTTATTACTGGCTCATTGTAGGAAGAATTCAACTTaGATCCATGAGACTGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTATPAPFSLKALLLAHCRKNST*IHETDL Trigger: CAAATCAGTCTCATGGATCAAAGTTGAATTCTTCCT...ACAATGAGCCAGTAATAAAGCCTTTAAACTAAAGGGGGCGGGGGTGGCAGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS TCA 90 bp | CCAATCCATACTCCCAGCATGGAATTTGTCACTGGTTTCTCGTCCTaGGGAGCAATACGGTTAACAATATGTGAAATCTCATCACTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PIHTPSMEFVTGFSS*GAIRLTICEISSLY Trigger: ATACAGTGATGAGATTTCACATATTGTTAACCGTATTGCTCCTCAGGACGAGAAACCAGTGACAAATTCCATGCTGGGAGTATGGATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 90 bp | GGCCAACAGCGGATCATTCCAGTCGTCAAAGGAAGAATTCAACTTTaGTCCATGAGACTGATTTGTGCTACACACAATATTTTCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQQRIIPVVKGRIQL*SMRLICATHNIFFA Trigger: GGCAAAGAAAATATTGTGTGTAGCACAAATCAGTCTCATGGATCAAAGTTGAATTCTTCCTTTGACGACTGGAATGATCCGCTGTTGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 90 bp | TCCACTACACATCTGAGTGGAACCATCAAATATAGCATTAAAGGCTaGTTCAACATTTTGGTCAAAGGGTTTCTGACTGCTGTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: STTHLSGTIKYSIKG*FNILVKGFLTAVLC Trigger: GCACAAGACAGCAGTCAGAAACCCTTTGACCAAAATGTTGAAGCAGCCTTTAATGCTATATTTGATGGTTCCACTCAGATGTGTAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS GCA 90 bp | TCTTTGCCCAAGAACACAGAATCAAATGGATCAGTAGTGGGTACTTaGAAAGGCAGATTAACACCAAGCTCGGAACTTTGTTTACTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLPKNTESNGSVVGT*KGRLTPSSELCLLG Trigger: TCCTAGTAAACAAAGTTCCGAGCTTGGTGTTAATCTGCCTTTGCAAGTACCCACTACTGATCCATTTGATTCTGTGTTCTTGGGCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGAGCTGGCTTTCACTCTaGACTTCTCTTTTGCTACGC | + |
|
Preference number: 5 (lower is better) Translates to: QFVKALRHLNSSEHQIKMSWLSL*TSLLLR Trigger: GCGTAGCAAAAGAGAAGTCAAGAGTGAAAGCCAGCT...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTGGCTGCTTCAACATTTaGGTCAAAGGGTTTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFGCFNI*VKGFLT Trigger: AGTCAGAAACCCTTTGACCAAAATGTTGAAGCAGCC...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGAAATCCTCTGAGATTTaGCCAACAGGCACACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFVKALRHLNSSEHQIKMKSSEI*PTGTLP Trigger: GGGAAGTGTGCCTGTTGGCAAAATCTCAGAGGATTT...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 90 bp | AATATAGCATTAAAGGCTGCTTCAACATTTTGGTCAAAGGGTTTCTaGCTGCTGTCTTGTGCCTTTGCCAAGGATATTCTACTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NIALKAASTFWSKGF*LLSCAFAKDILLSP Trigger: AGGAGACAGTAGAATATCCTTGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCAAAATGTTGAAGCAGCCTTTAATGCTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 90 bp | TGTGCTACACACAATATTTTCTTTGCCCAAGAACACAGAATCAAATaGATCAGTAGTGGGTACTTGCAAAGGCAGATTAACACCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CATHNIFFAQEHRIK*ISSGYLQRQINTKL Trigger: GAGCTTGGTGTTAATCTGCCTTTGCAAGTACCCACTACTGATCCATTTGATTCTGTGTTCTTGGGCAAAGAAAATATTGTGTGTAGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGCTTCCCATCTTGCTCTaGGATCACATCAAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QFVKALRHLNSSEHQIKMLPILL*DHIKFF Trigger: GAAGAACTTGATGTGATCCAAGAGCAAGATGGGAAG...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTACTGTCTCCTTTCATTaGCTTCTTCACAGGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFTVSFH*LLHRST Trigger: TGTACTCCTGTGAAGAAGCAAATGAAAGGAGACAGT...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 90 bp | GATCCCAGAAGATATCAGTTTGTCCATCTGGATCATTTGGAGAACTaGAGGTACAGGATAATAAATCCATTTTCACGATTTGTACTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DPRRYQFVHLDHLEN*RYRIINPFSRFVLA Trigger: CGCCAGTACAAATCGTGAAAATGGATTTATTATCCTGTACCTTCAGTTCTCCAAATGATCCAGATGGACAAACTGATATCTTCTGGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 90 bp | AAAGCTTTGGCCTTTCTTCGAACCAGTGCTTCCTGCCTTTTTCGTTaGATTTCTTCAGGAGAATACTTCCTATTTCTCTCTTCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KALAFLRTSASCLFR*ISSGEYFLFLSSSS Trigger: AGATGAAGAAGAGAGAAATAGGAAGTATTCTCCTGAAGAAATTCAACGAAAAAGGCAGGAAGCACTGGTTCGAAGAAAGGCCAAAGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 90 bp | ACAGGAGTACAAGTGATTTCAGGAACTACATCACCTGACGGCTTCTaGACAGAATCTTTATGGTTATCTAAATGTCCCATTTTTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGVQVISGTTSPDGF*TESLWLSKCPIFEV Trigger: GACTTCAAAAATGGGACATTTAGATAACCATAAAGATTCTGTGCAGAAGCCGTCAGGTGATGTAGTTCCTGAAATCACTTGTACTCCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 90 bp | GATGTGATTGTATCATTTTCACCAACTGAGGTACAAATTGCCTTCTaGCAAGTATCTTGGGCAGTTGTAGAAGGAACGAATTCAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: DVIVSFSPTEVQIAF*QVSWAVVEGTNSSI Trigger: AATGCTTGAATTCGTTCCTTCTACAACTGCCCAAGATACTTGTCAGAAGGCAATTTGTACCTCAGTTGGTGAAAATGATACAATCACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGGAGGGGAAAGTGATATaGGAGTTTTATTTAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QFVKALRHLNSSEHQIKMEGKVI*EFYLAG Trigger: ACCTGCTAAATAAAACTCCAATATCACTTTCCCCTC...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGGCTTCAAGCAATGAATaGACAGTTTCCCTTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QFVKALRHLNSSEHQIKMASSNE*TVSLFP Trigger: AGGAAAAAGGGAAACTGTCAATTCATTGCTTGAAGC...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CCTTCGTTCGACAGAAGCTTTATAGCTATTTTCGATGCTCATCTGCTACCATTTTTCCTGCCTTTTTCGTaGAATTTCTTCAGGAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: PSFDRSFIAIFDAHLLPFFLPFS*NFFRRI Trigger: TATTCTCCTGAAGAAATTCAACGAAAAAGGCAGGAA...AAATGGTAGCAGATGAGCATCGAAAATAGCTATAAAGCTTCTGTCGAACGAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGTGTCATTGGAGAATTTaGATCCCAGAAGATATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QFVKALRHLNSSEHQIKMCHWRI*IPEDIS Trigger: ACTGATATCTTCTGGGATCAAAATTCTCCAATGACA...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTCAAAGCTCTAAGACACCTGAACAGTAGTGAACATCAGATCAAAATGCACACAATATTTTCTTaGCCCAAGAACACAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: QFVKALRHLNSSEHQIKMHTIFS*PKNTES Trigger: TGATTCTGTGTTCTTGGGCAAAGAAAATATTGTGTG...CATTTTGATCTGATGTTCACTACTGTTCAGGTGTCTTAGAGCTTTGACAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 90 bp | ATTTCAGGAACTACATCACCTGACGGCTTCTGCACAGAATCTTTATaGTTATCTAAATGTCCCATTTTTGAAGTCATCTGGATAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: ISGTTSPDGFCTESL*LSKCPIFEVIWIKS Trigger: TGATTTTATCCAGATGACTTCAAAAATGGGACATTTAGATAACCATAAAGATTCTGTGCAGAAGCCGTCAGGTGATGTAGTTCCTGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 90 bp | TTGAATCTCTTAACCTTCCACCTAGATTCATATTTGTTCTTGATGTaGTTGTATCATTTTCACCAACTGAGGTACAAATTGCCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LNLLTFHLDSYLFLM*LYHFHQLRYKLPSD Trigger: GTCAGAAGGCAATTTGTACCTCAGTTGGTGAAAATGATACAATCACATCAAGAACAAATATGAATCTAGGTGGAAGGTTAAGAGATTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 72 bp | CTGTGCGGCGTGCTCCTCCGGGCAGGGCTGTCCGCATaGTTCCTTCGCCGACTCATTCCCGTGCCACCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCGVLLRAGLSA*FLRRLIPVPPS Trigger: GGACGGTGGCACGGGAATGAGTCGGCGAAGGAAGCATGCGGACAGCCCTGCCCGGAGGAGCACGCCGCACAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 90 bp | AGAGCTGACAACATTCCAATGTTTAGATGGCGCCGACTGGCTTGCTaGTTTAGATGCAGTAGAGCTACTTCTGGACCCACGAGTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RADNIPMFRWRRLAC*FRCSRATSGPTSGS Trigger: ACTTCCACTCGTGGGTCCAGAAGTAGCTCTACTGCATCTAAACAAGCAAGCCAGTCGGCGCCATCTAAACATTGGAATGTTGTCAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 72 bp | GACAACATTCCAATGTTTAGATGGCGCCGACTGGCTTaGTTGTTTAGATGCAGTAGAGCTACTTCTGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: DNIPMFRWRRLA*LFRCSRATSGP Trigger: GGGTCCAGAAGTAGCTCTACTGCATCTAAACAAGCAAGCCAGTCGGCGCCATCTAAACATTGGAATGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 72 bp | TGGCACTGCAGAGCTGACAACATTCCAATGTTTAGATaGCGCCGACTGGCTTGCTTGTTTAGATGCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: WHCRADNIPMFR*RRLACLFRCSR Trigger: TCTACTGCATCTAAACAAGCAAGCCAGTCGGCGCCATCTAAACATTGGAATGTTGTCAGCTCTGCAGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 72 bp | GTGAAATGGGAGCTGACTGCACAGTATGCAAAGCTTTaGCCTTTCTTCGAACCAGTGCTTCCTGCCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VKWELTAQYAKL*PFFEPVLPAFF Trigger: GAAAAAGGCAGGAAGCACTGGTTCGAAGAAAGGCCAAAGCTTTGCATACTGTGCAGTCAGCTCCCATTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 72 bp | AACATTCCAATGTTTAGATGGCGCCGACTGGCTTGCTaGTTTAGATGCAGTAGAGCTACTTCTGGACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: NIPMFRWRRLAC*FRCSRATSGPT Trigger: CGTGGGTCCAGAAGTAGCTCTACTGCATCTAAACAAGCAAGCCAGTCGGCGCCATCTAAACATTGGAATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 72 bp | GAGCTGACAACATTCCAATGTTTAGATGGCGCCGACTaGCTTGCTTGTTTAGATGCAGTAGAGCTACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ELTTFQCLDGAD*LACLDAVELLL Trigger: CAGAAGTAGCTCTACTGCATCTAAACAAGCAAGCCAGTCGGCGCCATCTAAACATTGGAATGTTGTCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 72 bp | AGTGAAATGGGAGCTGACTGCACAGTATGCAAAGCTTaGGCCTTTCTTCGAACCAGTGCTTCCTGCCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SEMGADCTVCKA*AFLRTSASCLF Trigger: AAAAAGGCAGGAAGCACTGGTTCGAAGAAAGGCCAAAGCTTTGCATACTGTGCAGTCAGCTCCCATTTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 72 bp | TGTCTCCTTTCATTTGCTTCTTCACAGGAGTACAAGTaGTTTCAGGAACTACATCACCTGACGGCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CLLSFASSQEYK*FQELHHLTASA Trigger: TGCAGAAGCCGTCAGGTGATGTAGTTCCTGAAATCACTTGTACTCCTGTGAAGAAGCAAATGAAAGGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS CAA 90 bp | GCTGTCTTGTGCCTTTGCCAAGGATATTCTACTGTCTCCTTTCATTaGCTTCTTCACAGGAGTACAAGTGATTTCAGGAACTACATCACC | + |
|
Preference number: 6 (lower is better) Translates to: AVLCLCQGYSTVSFH*LLHRSTSDFRNYIT Trigger: GGTGATGTAGTTCCTGAAATCACTTGTACTCCTGTGAAGAAGCAAATGAAAGGAGACAGTAGAATATCCTTGGCAAAGGCACAAGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS CAA 90 bp | CTGAGTGGAACCATCAAATATAGCATTAAAGGCTGCTTCAACATTTaGGTCAAAGGGTTTCTGACTGCTGTCTTGTGCCTTTGCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSGTIKYSIKGCFNI*VKGFLTAVLCLCQG Trigger: TCCTTGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCAAAATGTTGAAGCAGCCTTTAATGCTATATTTGATGGTTCCACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS TCA 72 bp | ACTCCCAGCATGGAATTTGTCACTGGTTTCTCGTCCTaGGGAGCAATACGGTTAACAATATGTGAAATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPSMEFVTGFSS*GAIRLTICEIS Trigger: TGAGATTTCACATATTGTTAACCGTATTGCTCCTCAGGACGAGAAACCAGTGACAAATTCCATGCTGGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS GCA 72 bp | GAGTGGAAGTATAACTTACACTCTCTGACTCCTCGCTaGCCTTGTTTTCTTGCTGAGTTAGTCTTTCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: EWKYNLHSLTPR*PCFLAELVFQC Trigger: ACATTGAAAGACTAACTCAGCAAGAAAACAAGGGCAGCGAGGAGTCAGAGAGTGTAAGTTATACTTCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS CAA 72 bp | TTTGGTCAAAGGGTTTCTGACTGCTGTCTTGTGCCTTaGCCAAGGATATTCTACTGTCTCCTTTCATTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGQRVSDCCLVP*PRIFYCLLSFA Trigger: AGCAAATGAAAGGAGACAGTAGAATATCCTTGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
||
| CDS CAA 72 bp | CAAGAACACAGAATCAAATGGATCAGTAGTGGGTACTaGCAAAGGCAGATTAACACCAAGCTCGGAACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QEHRIKWISSGY*QRQINTKLGTL Trigger: CAAAGTTCCGAGCTTGGTGTTAATCTGCCTTTGCAAGTACCCACTACTGATCCATTTGATTCTGTGTTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 90 bp | CTTCAACATTTTGGTCAAAGGGTTTCTGACTGCTGTCTTGTGCCTTaGCCAAGGATATTCTACTGTCTCCTTTCATTTGCTTCTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: LQHFGQRVSDCCLVP*PRIFYCLLSFASSQ Trigger: CTGTGAAGAAGCAAATGAAAGGAGACAGTAGAATATCCTTGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCAAAATGTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 90 bp | AAAGGCTGCTTCAACATTTTGGTCAAAGGGTTTCTGACTGCTGTCTaGTGCCTTTGCCAAGGATATTCTACTGTCTCCTTTCATTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KGCFNILVKGFLTAV*CLCQGYSTVSFHLL Trigger: AAGCAAATGAAAGGAGACAGTAGAATATCCTTGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCAAAATGTTGAAGCAGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 72 bp | TCTAACAGATCTTGGCTTAGCTGTCCACTACACATCTaGGTGGAACCATCAAATATAGCATTAAAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SNRSWLSCPLHI*VEPSNIALKAA Trigger: AGCAGCCTTTAATGCTATATTTGATGGTTCCACTCAGATGTGTAGTGGACAGCTAAGCCAAGATCTGTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 72 bp | GCCTTTCTTCGAACCAGTGCTTCCTGCCTTTTTCGTTaGATTTCTTCAGGAGAATACTTCCTATTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: AFLRTSASCLFR*ISSGEYFLFLS Trigger: AGAGAGAAATAGGAAGTATTCTCCTGAAGAAATTCAACGAAAAAGGCAGGAAGCACTGGTTCGAAGAAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 72 bp | AACATTTTGGTCAAAGGGTTTCTGACTGCTGTCTTGTaGCTTTGCCAAGGATATTCTACTGTCTCCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: NILVKGFLTAVL*LCQGYSTVSFH Trigger: ATGAAAGGAGACAGTAGAATATCCTTGGCAAAGGCACAAGACAGCAGTCAGAAACCCTTTGACCAAAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 72 bp | AAGAACACAGAATCAAATGGATCAGTAGTGGGTACTTaGAAAGGCAGATTAACACCAAGCTCGGAACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: KNTESNGSVVGT*KGRLTPSSELC Trigger: ACAAAGTTCCGAGCTTGGTGTTAATCTGCCTTTGCAAGTACCCACTACTGATCCATTTGATTCTGTGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 72 bp | TGCCTTTGCCAAGGATATTCTACTGTCTCCTTTCATTaGCTTCTTCACAGGAGTACAAGTGATTTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CLCQGYSTVSFH*LLHRSTSDFRN Trigger: GTTCCTGAAATCACTTGTACTCCTGTGAAGAAGCAAATGAAAGGAGACAGTAGAATATCCTTGGCAAAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 72 bp | GTTCTCCAGCATTTCTTAGCTCTCCGTTTCGTGTCTTaGAGGGAAGATCCAGTGTTACTTTTGAATCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VLQHFLALRFVS*REDPVLLLNLL Trigger: TAAGAGATTCAAAAGTAACACTGGATCTTCCCTCAAAGACACGAAACGGAGAGCTAAGAAATGCTGGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 72 bp | TTTCTCGTCCTGAGGAGCAATACGGTTAACAATATGTaGAATCTCATCACTGTATGCACTGGAAATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FLVLRSNTVNNM*NLITVCTGNLL Trigger: AAGCAGATTTCCAGTGCATACAGTGATGAGATTTCACATATTGTTAACCGTATTGCTCCTCAGGACGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CCA 72 bp | ACTACATCACCTGACGGCTTCTGCACAGAATCTTTATaGTTATCTAAATGTCCCATTTTTGAAGTCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: TTSPDGFCTESL*LSKCPIFEVIW Trigger: CCAGATGACTTCAAAAATGGGACATTTAGATAACCATAAAGATTCTGTGCAGAAGCCGTCAGGTGATGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS TCA 72 bp | CGGATCATTCCAGTCGTCAAAGGAAGAATTCAACTTTaGTCCATGAGACTGATTTGTGCTACACACAATATT | + |
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Preference number: 6 (lower is better) Translates to: RIIPVVKGRIQL*SMRLICATHNI Trigger: AATATTGTGTGTAGCACAAATCAGTCTCATGGATCAAAGTTGAATTCTTCCTTTGACGACTGGAATGATCCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS CAA 90 bp | TCCAGTCGTCAAAGGAAGAATTCAACTTTGATCCATGAGACTGATTaGTGCTACACACAATATTTTCTTTGCCCAAGAACACAGAATCAA | + |
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Preference number: 6 (lower is better) Translates to: SSRQRKNSTLIHETD*CYTQYFLCPRTQNQ Trigger: TTGATTCTGTGTTCTTGGGCAAAGAAAATATTGTGTGTAGCACAAATCAGTCTCATGGATCAAAGTTGAATTCTTCCTTTGACGACTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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| CDS GCA 72 bp | AGGAAGAATTCAACTTTGATCCATGAGACTGATTTGTaGTACACACAATATTTTCTTTGCCCAAGAACACAG | + |
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Preference number: 6 (lower is better) Translates to: RKNSTLIHETDL*YTQYFLCPRTQ Trigger: CTGTGTTCTTGGGCAAAGAAAATATTGTGTGTAGCACAAATCAGTCTCATGGATCAAAGTTGAATTCTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076661.7 |
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